Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070436.t1 | XP_003599534.2 | 95.4 | 519 | 18 | 1 | 1 | 513 | 1 | 519 | 2.70E-292 | 1013.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070436.t1 | Q9FFZ1 | 62.3 | 438 | 157 | 5 | 64 | 496 | 34 | 468 | 9.9e-158 | 558.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070436.t1 | G7IZM0 | 95.4 | 519 | 18 | 1 | 1 | 513 | 1 | 519 | 2.0e-292 | 1013.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054556 | MS.gene070436 | 0.80353 | 3.34E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene070436 | 0.827873 | 1.23E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene070436 | 0.816588 | 5.12E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070436.t1 | MTR_3g034670 | 95.376 | 519 | 18 | 1 | 1 | 513 | 1 | 519 | 0.0 | 1009 |
| MS.gene070436.t1 | MTR_8g077185 | 28.162 | 419 | 228 | 14 | 42 | 450 | 16 | 371 | 2.75e-31 | 124 |
| MS.gene070436.t1 | MTR_5g056200 | 24.923 | 325 | 206 | 9 | 127 | 451 | 61 | 347 | 2.19e-24 | 104 |
| MS.gene070436.t1 | MTR_1g076920 | 24.781 | 343 | 194 | 13 | 123 | 444 | 91 | 390 | 1.57e-20 | 94.0 |
| MS.gene070436.t1 | MTR_4g036495 | 25.938 | 320 | 179 | 10 | 133 | 446 | 411 | 678 | 1.32e-19 | 92.8 |
| MS.gene070436.t1 | MTR_3g036050 | 36.257 | 171 | 87 | 5 | 264 | 421 | 809 | 970 | 5.86e-19 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070436.t1 | AT5G13800 | 66.290 | 442 | 141 | 5 | 64 | 500 | 34 | 472 | 0.0 | 608 |
| MS.gene070436.t1 | AT5G13800 | 66.290 | 442 | 141 | 5 | 64 | 500 | 34 | 472 | 0.0 | 608 |
| MS.gene070436.t1 | AT5G13800 | 66.290 | 442 | 141 | 5 | 64 | 500 | 57 | 495 | 0.0 | 608 |
| MS.gene070436.t1 | AT5G13800 | 70.699 | 372 | 103 | 4 | 64 | 432 | 34 | 402 | 0.0 | 553 |
| MS.gene070436.t1 | AT4G36530 | 29.942 | 344 | 189 | 12 | 110 | 441 | 2 | 305 | 5.71e-28 | 114 |
| MS.gene070436.t1 | AT4G36530 | 29.942 | 344 | 189 | 12 | 110 | 441 | 59 | 362 | 1.65e-27 | 114 |
| MS.gene070436.t1 | AT5G19850 | 25.301 | 332 | 209 | 10 | 110 | 441 | 64 | 356 | 4.15e-23 | 101 |
| MS.gene070436.t1 | AT4G25290 | 26.444 | 329 | 177 | 11 | 127 | 447 | 402 | 673 | 4.80e-18 | 87.8 |
Find 117 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGTATTCGGTTGATTTA+TGG | 0.184371 | 3.3:-25513478 | MS.gene070436:CDS |
| CACTAAAAGACTCAAATTTA+AGG | 0.189165 | 3.3:-25513942 | MS.gene070436:CDS |
| TCATAATGAACATTCAATTT+AGG | 0.203184 | 3.3:+25513758 | None:intergenic |
| ATCAATAATCTTTACACAAT+TGG | 0.240162 | 3.3:-25514013 | MS.gene070436:CDS |
| CTAACTCTCTTTCAATAGTT+TGG | 0.243271 | 3.3:+25511051 | None:intergenic |
| TATGGGGACTTCAGGTTAAA+AGG | 0.267598 | 3.3:-25511652 | MS.gene070436:CDS |
| AATGTTTCGCCTTGGGGTTT+TGG | 0.273427 | 3.3:-25513530 | MS.gene070436:CDS |
| ATCCTTGGGTGACACCTATA+TGG | 0.274359 | 3.3:-25511670 | MS.gene070436:CDS |
| GAGAAGCAGTTGATGGATTT+AGG | 0.290761 | 3.3:-25513659 | MS.gene070436:CDS |
| TATTGCCGATGTACTTAATC+AGG | 0.311983 | 3.3:-25511963 | MS.gene070436:CDS |
| GCAGGGCTGATTTGATAATA+AGG | 0.317228 | 3.3:+25511614 | None:intergenic |
| TGCCTCAAGTGTCTCACTTT+GGG | 0.321402 | 3.3:-25510982 | MS.gene070436:CDS |
| ATTTGATAATAAGGAGCTTC+AGG | 0.341340 | 3.3:+25511623 | None:intergenic |
| CTCAAATTTAAGGTTAATAG+TGG | 0.351895 | 3.3:-25513932 | MS.gene070436:CDS |
| GATGAAGGAAGAGATATTGT+AGG | 0.356457 | 3.3:-25513881 | MS.gene070436:CDS |
| GAGTGGAAATGTTTCGCCTT+GGG | 0.357128 | 3.3:-25513537 | MS.gene070436:CDS |
| GGCGACTGAGCTTGTGTATT+CGG | 0.358843 | 3.3:-25513489 | MS.gene070436:CDS |
| AGATCCTGCTCCTTTGTCTA+AGG | 0.359553 | 3.3:-25513576 | MS.gene070436:CDS |
| GTAAGTTTCTTTATATTTGA+AGG | 0.368820 | 3.3:+25512264 | None:intergenic |
| GAAATGGAAACTCTTTCATA+TGG | 0.376519 | 3.3:-25514145 | MS.gene070436:CDS |
| GCTCCTTTGTCTAAGGTAGA+AGG | 0.380700 | 3.3:-25513569 | MS.gene070436:CDS |
| TCATTATGAGAAGCAGTTGA+TGG | 0.388498 | 3.3:-25513666 | MS.gene070436:CDS |
| GCTGAAGGATAATTCTCCTT+GGG | 0.395504 | 3.3:+25511835 | None:intergenic |
| GTCATAAATTTCTTACTTCG+TGG | 0.404663 | 3.3:-25511143 | MS.gene070436:CDS |
| TCAATAATCTTTACACAATT+GGG | 0.407104 | 3.3:-25514012 | MS.gene070436:CDS |
| CGCTGAAGGATAATTCTCCT+TGG | 0.410914 | 3.3:+25511834 | None:intergenic |
| GACACCTATATGGGGACTTC+AGG | 0.417003 | 3.3:-25511660 | MS.gene070436:CDS |
| TTGCCTCAAGTGTCTCACTT+TGG | 0.422834 | 3.3:-25510983 | MS.gene070436:CDS |
| GCAAATGAGGCTGCAGCAGC+AGG | 0.429355 | 3.3:+25511875 | None:intergenic |
| TTAACCTGAAGTCCCCATAT+AGG | 0.431257 | 3.3:+25511656 | None:intergenic |
| CTCCTTTGTCTAAGGTAGAA+GGG | 0.432227 | 3.3:-25513568 | MS.gene070436:CDS |
| TCCTTGGGTGACACCTATAT+GGG | 0.437100 | 3.3:-25511669 | MS.gene070436:CDS |
| ATGAAGGAAGAGATATTGTA+GGG | 0.437799 | 3.3:-25513880 | MS.gene070436:CDS |
| GTTTGAATTCAACTCAATCA+AGG | 0.438343 | 3.3:-25514069 | MS.gene070436:CDS |
| AACTACCACCTCCTTGGACT+TGG | 0.440929 | 3.3:+25510929 | None:intergenic |
| TTCTTTATATTTGAAGGTAG+AGG | 0.445927 | 3.3:+25512270 | None:intergenic |
| ATTTATGGCAAGATCAAGTT+CGG | 0.451015 | 3.3:-25513463 | MS.gene070436:CDS |
| AAGGTTAATAGTGGAAGTTA+TGG | 0.452518 | 3.3:-25513923 | MS.gene070436:CDS |
| GATGAATCCAACGGTGAATC+CGG | 0.455013 | 3.3:-25513815 | MS.gene070436:CDS |
| GGTGAACCAGTCTATATTGT+AGG | 0.458199 | 3.3:-25512453 | MS.gene070436:CDS |
| CGAGTGGAAATGTTTCGCCT+TGG | 0.459293 | 3.3:-25513538 | MS.gene070436:CDS |
| TTTCCGTACATGAGGCAAAT+CGG | 0.461535 | 3.3:+25511698 | None:intergenic |
| TCATGAGGGCAGTGACCAGC+AGG | 0.463365 | 3.3:+25511596 | None:intergenic |
| TGTACGGAAAAGAAGATCCT+TGG | 0.467384 | 3.3:-25511685 | MS.gene070436:CDS |
| TAAATTTCTTACTTCGTGGA+TGG | 0.469086 | 3.3:-25511139 | MS.gene070436:CDS |
| AAGCTCAGTCGCCCACGGTT+CGG | 0.472964 | 3.3:+25513499 | None:intergenic |
| AGATTCAACTACCACCTCCT+TGG | 0.474343 | 3.3:+25510923 | None:intergenic |
| GTTACACCTTTCACTAAATG+AGG | 0.478531 | 3.3:+25512384 | None:intergenic |
| GACTTGCCAAAGTATTTCCA+TGG | 0.484178 | 3.3:-25512305 | MS.gene070436:CDS |
| TCCGGCCCATGGAAATACTT+TGG | 0.486998 | 3.3:+25512299 | None:intergenic |
| GGTTGATGTACCTGCTTCAA+AGG | 0.488420 | 3.3:-25513858 | MS.gene070436:CDS |
| CGCAGATCATTCAATAAATG+TGG | 0.489285 | 3.3:-25511936 | MS.gene070436:CDS |
| TATTATCAAATCAGCCCTGC+TGG | 0.491907 | 3.3:-25511611 | MS.gene070436:CDS |
| TGAAGGTAGAGGGAATGTTC+CGG | 0.494970 | 3.3:+25512281 | None:intergenic |
| CCAAATCCAGTAAAATCTCC+TGG | 0.495923 | 3.3:-25512327 | MS.gene070436:CDS |
| GCCAAAGTATTTCCATGGGC+CGG | 0.503917 | 3.3:-25512300 | MS.gene070436:CDS |
| AATGTTCATTATGAGAAAGC+TGG | 0.506517 | 3.3:-25513749 | MS.gene070436:CDS |
| CCTTGATAATGTTTCGCTGA+AGG | 0.506677 | 3.3:+25511820 | None:intergenic |
| TCTTTATATTTGAAGGTAGA+GGG | 0.516316 | 3.3:+25512271 | None:intergenic |
| GATTCACCGTTGGATTCATC+CGG | 0.520359 | 3.3:+25513818 | None:intergenic |
| GGAAATACTTTGGCAAGTCC+AGG | 0.521700 | 3.3:+25512309 | None:intergenic |
| AGAGGGAATGTTCCGGCCCA+TGG | 0.525112 | 3.3:+25512288 | None:intergenic |
| AAAGGAGCAGGATCTTCAAA+AGG | 0.528883 | 3.3:+25513584 | None:intergenic |
| TCAATTATGTTTGCTCCCCA+AGG | 0.529087 | 3.3:-25511851 | MS.gene070436:CDS |
| AAACATAATTGAAGCAAATG+AGG | 0.531154 | 3.3:+25511862 | None:intergenic |
| AGAGAGAGCCATCAGACTCT+AGG | 0.533108 | 3.3:+25511108 | None:intergenic |
| TTTGAATTCAACTCAATCAA+GGG | 0.535016 | 3.3:-25514068 | MS.gene070436:CDS |
| CCTTCAGCGAAACATTATCA+AGG | 0.535892 | 3.3:-25511820 | MS.gene070436:intron |
| GTACGGAAAAGAAGATCCTT+GGG | 0.536764 | 3.3:-25511684 | MS.gene070436:CDS |
| TGCTATCCTCATTTAGTGAA+AGG | 0.537578 | 3.3:-25512390 | MS.gene070436:CDS |
| CAAGTGTCTCACTTTGGGAC+AGG | 0.539302 | 3.3:-25510977 | MS.gene070436:CDS |
| GTTTCTTATATTAGAAACCA+TGG | 0.543441 | 3.3:-25514046 | MS.gene070436:CDS |
| TATAAAGAAACTTACAGAGT+TGG | 0.547616 | 3.3:-25512256 | MS.gene070436:CDS |
| AGTGGAAATGTTTCGCCTTG+GGG | 0.549038 | 3.3:-25513536 | MS.gene070436:CDS |
| CACCGCACCGGATTCACCGT+TGG | 0.550804 | 3.3:+25513808 | None:intergenic |
| GTGCCGATTTGCCTCATGTA+CGG | 0.555771 | 3.3:-25511701 | MS.gene070436:CDS |
| GGGACTTCAGGTTAAAAGGA+AGG | 0.555835 | 3.3:-25511648 | MS.gene070436:CDS |
| TTGGATTCATCCGGTAAACC+AGG | 0.555967 | 3.3:+25513827 | None:intergenic |
| ACCCCTTCTACCTTAGACAA+AGG | 0.561060 | 3.3:+25513566 | None:intergenic |
| TGCAGCAGCAGGATGTCTTG+TGG | 0.564810 | 3.3:+25511886 | None:intergenic |
| TCCTTTGTCTAAGGTAGAAG+GGG | 0.565381 | 3.3:-25513567 | MS.gene070436:CDS |
| AAAATTCTATTCCAAGTCCA+AGG | 0.565946 | 3.3:-25510940 | MS.gene070436:CDS |
| GAAAGCTGGGTGTGAAAATG+TGG | 0.572261 | 3.3:-25513735 | MS.gene070436:CDS |
| GGAATCAAAACCTTTGAAGC+AGG | 0.573711 | 3.3:+25513848 | None:intergenic |
| ATTGATTCGTTACAGGTCAT+CGG | 0.573887 | 3.3:-25512474 | MS.gene070436:intron |
| AAAGAACCAACACCGAAACC+CGG | 0.578498 | 3.3:+25513689 | None:intergenic |
| CTATTCCAAGTCCAAGGAGG+TGG | 0.580393 | 3.3:-25510934 | MS.gene070436:CDS |
| GAGTTGCCTACAATATAGAC+TGG | 0.588003 | 3.3:+25512447 | None:intergenic |
| TGGAGATGAAACCGAACCGT+GGG | 0.590049 | 3.3:-25513510 | MS.gene070436:CDS |
| GTGTCTATTTCTTCAAGCAG+AGG | 0.590583 | 3.3:+25511080 | None:intergenic |
| AGTTCGGTACTTCATTGAAG+AGG | 0.593978 | 3.3:-25513447 | MS.gene070436:intron |
| TCTACCTTAGACAAAGGAGC+AGG | 0.601953 | 3.3:+25513572 | None:intergenic |
| TATATTGTAGGCAACTCACT+AGG | 0.603853 | 3.3:-25512441 | MS.gene070436:CDS |
| ATGTTCATTATGAGAAAGCT+GGG | 0.614844 | 3.3:-25513748 | MS.gene070436:CDS |
| GTAGAAGGGGTTATGTCGAG+TGG | 0.616320 | 3.3:-25513554 | MS.gene070436:CDS |
| ACAACTACTTATCACCGCAC+CGG | 0.616475 | 3.3:+25513796 | None:intergenic |
| ACTTGCCAAAGTATTTCCAT+GGG | 0.623837 | 3.3:-25512304 | MS.gene070436:CDS |
| ATTAGAAACCTAGAGTCTGA+TGG | 0.625268 | 3.3:-25511116 | MS.gene070436:CDS |
| GTTTCATCTCCAAAACCCCA+AGG | 0.634038 | 3.3:+25513521 | None:intergenic |
| TACACAAGCTCAGTCGCCCA+CGG | 0.634556 | 3.3:+25513494 | None:intergenic |
| CCCCATATAGGTGTCACCCA+AGG | 0.637101 | 3.3:+25511668 | None:intergenic |
| TTGGAGATGAAACCGAACCG+TGG | 0.642794 | 3.3:-25513511 | MS.gene070436:CDS |
| GTCCCAAAGTGAGACACTTG+AGG | 0.644558 | 3.3:+25510980 | None:intergenic |
| TATGTGATTAATGAAGATGA+AGG | 0.646571 | 3.3:-25513896 | MS.gene070436:CDS |
| ACCTCGGGGACTTCATCATG+AGG | 0.647754 | 3.3:+25511581 | None:intergenic |
| GTGTTCATAACTTGACAACA+TGG | 0.649898 | 3.3:+25514115 | None:intergenic |
| ATTGTAGGCAACTCACTAGG+AGG | 0.650017 | 3.3:-25512438 | MS.gene070436:CDS |
| CTGAAGGATAATTCTCCTTG+GGG | 0.654826 | 3.3:+25511836 | None:intergenic |
| TGAAGGAAGAGATATTGTAG+GGG | 0.662501 | 3.3:-25513879 | MS.gene070436:CDS |
| GGTTTACCGGATGAATCCAA+CGG | 0.680274 | 3.3:-25513824 | MS.gene070436:CDS |
| CCTCGGGGACTTCATCATGA+GGG | 0.688209 | 3.3:+25511582 | None:intergenic |
| CATGAGGGCAGTGACCAGCA+GGG | 0.689126 | 3.3:+25511597 | None:intergenic |
| GTAAACCTGATTAAGTACAT+CGG | 0.689690 | 3.3:+25511958 | None:intergenic |
| CCCTCATGATGAAGTCCCCG+AGG | 0.691356 | 3.3:-25511582 | MS.gene070436:intron |
| CCTTGGGTGACACCTATATG+GGG | 0.695951 | 3.3:-25511668 | MS.gene070436:CDS |
| ATTCTATTCCAAGTCCAAGG+AGG | 0.718477 | 3.3:-25510937 | MS.gene070436:CDS |
| ATCCAACGGTGAATCCGGTG+CGG | 0.730193 | 3.3:-25513810 | MS.gene070436:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAAGTTCAAAAAAAT+CGG | - | chr3.3:25514038-25514057 | MS.gene070436:CDS | 15.0% |
| !! | ATACAGCTTAAAAAAAATTT+AGG | + | chr3.3:25511763-25511782 | None:intergenic | 15.0% |
| !!! | ATTTTCTAAAATTGTTTTAG+AGG | - | chr3.3:25512494-25512513 | MS.gene070436:intron | 15.0% |
| !!! | TTATCTTTTACTATTGAAAT+AGG | + | chr3.3:25511872-25511891 | None:intergenic | 15.0% |
| !!! | TTTTCTAAAATTGTTTTAGA+GGG | - | chr3.3:25512495-25512514 | MS.gene070436:intron | 15.0% |
| !! | AAAATTGAATAGATACGATA+AGG | + | chr3.3:25513019-25513038 | None:intergenic | 20.0% |
| !! | AAATTGAATAGATACGATAA+GGG | + | chr3.3:25513018-25513037 | None:intergenic | 20.0% |
| !! | AATTAAACTAAATGACCATT+CGG | + | chr3.3:25512102-25512121 | None:intergenic | 20.0% |
| !! | ATCAATAATCTTTACACAAT+TGG | - | chr3.3:25511046-25511065 | MS.gene070436:CDS | 20.0% |
| !! | GAAACAAATTAATAAGAATC+AGG | + | chr3.3:25513043-25513062 | None:intergenic | 20.0% |
| !! | GTAAGTTTCTTTATATTTGA+AGG | + | chr3.3:25512798-25512817 | None:intergenic | 20.0% |
| !! | TCAATAATCTTTACACAATT+GGG | - | chr3.3:25511047-25511066 | MS.gene070436:CDS | 20.0% |
| !! | TCATAATGAACATTCAATTT+AGG | + | chr3.3:25511304-25511323 | None:intergenic | 20.0% |
| !!! | ACTGTTTTTGTATAAGTTAT+AGG | - | chr3.3:25511899-25511918 | MS.gene070436:CDS | 20.0% |
| !!! | ACTTTTTTTAATATCAGTAG+TGG | - | chr3.3:25512123-25512142 | MS.gene070436:intron | 20.0% |
| !!! | ATCCAATTTTATTTATTTGC+AGG | - | chr3.3:25513894-25513913 | MS.gene070436:CDS | 20.0% |
| !!! | CTTATATGATCTTAGAATTT+TGG | + | chr3.3:25513684-25513703 | None:intergenic | 20.0% |
| !!! | CTTATTAATTTGTTTCCTTT+AGG | - | chr3.3:25513047-25513066 | MS.gene070436:intron | 20.0% |
| !!! | GATTTTTTTGAACTTTTTCT+TGG | + | chr3.3:25514039-25514058 | None:intergenic | 20.0% |
| !!! | TATATGATGGAAACATTTTA+TGG | + | chr3.3:25511974-25511993 | None:intergenic | 20.0% |
| !!! | TCATTGAGATTTTATGAAAA+GGG | - | chr3.3:25511070-25511089 | MS.gene070436:CDS | 20.0% |
| !!! | TTTTAAGCTGTATTATTCTT+TGG | - | chr3.3:25511770-25511789 | MS.gene070436:intron | 20.0% |
| ! | AAACATAATTGAAGCAAATG+AGG | + | chr3.3:25513200-25513219 | None:intergenic | 25.0% |
| ! | AATTGAATAGATACGATAAG+GGG | + | chr3.3:25513017-25513036 | None:intergenic | 25.0% |
| ! | ACTAATAAAACCAGAAAACT+AGG | + | chr3.3:25512051-25512070 | None:intergenic | 25.0% |
| ! | AGACAATTAGTTCATGATTT+CGG | - | chr3.3:25512161-25512180 | MS.gene070436:intron | 25.0% |
| ! | AGATTTCACATAACTACTAA+TGG | + | chr3.3:25512013-25512032 | None:intergenic | 25.0% |
| ! | ATTAACTATGATATTCGCAA+AGG | + | chr3.3:25512950-25512969 | None:intergenic | 25.0% |
| ! | CACTAAAAGACTCAAATTTA+AGG | - | chr3.3:25511117-25511136 | MS.gene070436:CDS | 25.0% |
| ! | GACCTGCAAATAAATAAAAT+TGG | + | chr3.3:25513899-25513918 | None:intergenic | 25.0% |
| ! | GTTTCTTATATTAGAAACCA+TGG | - | chr3.3:25511013-25511032 | MS.gene070436:CDS | 25.0% |
| ! | TAGAACAAAAATATTGCACA+AGG | + | chr3.3:25512550-25512569 | None:intergenic | 25.0% |
| ! | TATAAAGAAACTTACAGAGT+TGG | - | chr3.3:25512803-25512822 | MS.gene070436:intron | 25.0% |
| ! | TATGTGATTAATGAAGATGA+AGG | - | chr3.3:25511163-25511182 | MS.gene070436:intron | 25.0% |
| ! | TATTGATGTAAAAACATCCA+TGG | + | chr3.3:25511033-25511052 | None:intergenic | 25.0% |
| ! | TCATAAAGAACTAAACAATG+AGG | + | chr3.3:25513851-25513870 | None:intergenic | 25.0% |
| ! | TCTTTATATTTGAAGGTAGA+GGG | + | chr3.3:25512791-25512810 | None:intergenic | 25.0% |
| ! | TTCTTTATATTTGAAGGTAG+AGG | + | chr3.3:25512792-25512811 | None:intergenic | 25.0% |
| ! | TTTGAATTCAACTCAATCAA+GGG | - | chr3.3:25510991-25511010 | MS.gene070436:CDS | 25.0% |
| !! | ATTAAGTTGTTTATCCAATG+AGG | + | chr3.3:25511803-25511822 | None:intergenic | 25.0% |
| !! | ATTGATTTATTTGATGGTAG+TGG | + | chr3.3:25512356-25512375 | None:intergenic | 25.0% |
| !! | CTCAAATTTAAGGTTAATAG+TGG | - | chr3.3:25511127-25511146 | MS.gene070436:CDS | 25.0% |
| !! | GTCATTGAGATTTTATGAAA+AGG | - | chr3.3:25511069-25511088 | MS.gene070436:CDS | 25.0% |
| !! | TATTCATGATGGAATATAGT+TGG | - | chr3.3:25512070-25512089 | MS.gene070436:intron | 25.0% |
| !! | TCCTAACTAATTAACTTGAA+CGG | - | chr3.3:25513508-25513527 | MS.gene070436:CDS | 25.0% |
| !!! | ACCAAATGTTTTATTTTTGC+CGG | - | chr3.3:25511351-25511370 | MS.gene070436:intron | 25.0% |
| !!! | ATGATCTTAGAATTTTGGTT+GGG | + | chr3.3:25513679-25513698 | None:intergenic | 25.0% |
| !!! | ATTAATTTGTTTCCTTTAGG+TGG | - | chr3.3:25513050-25513069 | MS.gene070436:intron | 25.0% |
| !!! | CAATTTTTCTTGTTTCTATG+TGG | - | chr3.3:25511723-25511742 | MS.gene070436:intron | 25.0% |
| !!! | GGTTTTATTAGTATTCATGA+TGG | - | chr3.3:25512059-25512078 | MS.gene070436:intron | 25.0% |
| !!! | GTGATAAGTAGTTGTTTTAA+GGG | - | chr3.3:25511271-25511290 | MS.gene070436:intron | 25.0% |
| !!! | TATACAAATTGATTCGTTAC+AGG | - | chr3.3:25512578-25512597 | MS.gene070436:intron | 25.0% |
| !!! | TATGATCTTAGAATTTTGGT+TGG | + | chr3.3:25513680-25513699 | None:intergenic | 25.0% |
| !!! | TTAATTTGTTTCCTTTAGGT+GGG | - | chr3.3:25513051-25513070 | MS.gene070436:intron | 25.0% |
| !!! | TTGAGCATTGATTTATTTGA+TGG | + | chr3.3:25512362-25512381 | None:intergenic | 25.0% |
| AAAATTCTATTCCAAGTCCA+AGG | - | chr3.3:25514119-25514138 | MS.gene070436:CDS | 30.0% | |
| AAAGAACTAAACAATGAGGA+AGG | + | chr3.3:25513847-25513866 | None:intergenic | 30.0% | |
| AATAAGCCGAAAACAACTTA+TGG | - | chr3.3:25511943-25511962 | MS.gene070436:CDS | 30.0% | |
| AATGTTCATTATGAGAAAGC+TGG | - | chr3.3:25511310-25511329 | MS.gene070436:intron | 30.0% | |
| ATGAAGGAAGAGATATTGTA+GGG | - | chr3.3:25511179-25511198 | MS.gene070436:intron | 30.0% | |
| ATGTTCATTATGAGAAAGCT+GGG | - | chr3.3:25511311-25511330 | MS.gene070436:intron | 30.0% | |
| ATTGTAGATAGCTTTCTTGA+TGG | + | chr3.3:25512401-25512420 | None:intergenic | 30.0% | |
| ATTTATGGCAAGATCAAGTT+CGG | - | chr3.3:25511596-25511615 | MS.gene070436:CDS | 30.0% | |
| CTAACTCTCTTTCAATAGTT+TGG | + | chr3.3:25514011-25514030 | None:intergenic | 30.0% | |
| CTGAAAATGAGTTTGTAAGT+TGG | - | chr3.3:25513600-25513619 | MS.gene070436:CDS | 30.0% | |
| GATGGAAATTACTATGTCAT+AGG | - | chr3.3:25512283-25512302 | MS.gene070436:CDS | 30.0% | |
| GTAAACCTGATTAAGTACAT+CGG | + | chr3.3:25513104-25513123 | None:intergenic | 30.0% | |
| GTCATAAATTTCTTACTTCG+TGG | - | chr3.3:25513916-25513935 | MS.gene070436:CDS | 30.0% | |
| GTTTGAATTCAACTCAATCA+AGG | - | chr3.3:25510990-25511009 | MS.gene070436:CDS | 30.0% | |
| TAAATATTCAGTGCGCAAAA+AGG | + | chr3.3:25513764-25513783 | None:intergenic | 30.0% | |
| TAAATTTCTTACTTCGTGGA+TGG | - | chr3.3:25513920-25513939 | MS.gene070436:CDS | 30.0% | |
| TACGTGAATACACATGTTAA+TGG | - | chr3.3:25513296-25513315 | MS.gene070436:intron | 30.0% | |
| TTGTAGATAGCTTTCTTGAT+GGG | + | chr3.3:25512400-25512419 | None:intergenic | 30.0% | |
| ! | AAGGTTAATAGTGGAAGTTA+TGG | - | chr3.3:25511136-25511155 | MS.gene070436:CDS | 30.0% |
| ! | ACACATGTTAATGGTTTTTG+CGG | - | chr3.3:25513305-25513324 | MS.gene070436:intron | 30.0% |
| ! | ACCGTTCAAGTTAATTAGTT+AGG | + | chr3.3:25513512-25513531 | None:intergenic | 30.0% |
| ! | ATTTGATAATAAGGAGCTTC+AGG | + | chr3.3:25513439-25513458 | None:intergenic | 30.0% |
| ! | CAACTTACAAACTCATTTTC+AGG | + | chr3.3:25513602-25513621 | None:intergenic | 30.0% |
| ! | CTTTGCAAGCTAATTTTGTA+GGG | - | chr3.3:25513635-25513654 | MS.gene070436:CDS | 30.0% |
| ! | GCTGTATTATTCTTTGGTTT+AGG | - | chr3.3:25511776-25511795 | MS.gene070436:intron | 30.0% |
| ! | TGGACTTGGAATAGAATTTT+AGG | + | chr3.3:25514119-25514138 | None:intergenic | 30.0% |
| ! | TTGTGTATTCGGTTGATTTA+TGG | - | chr3.3:25511581-25511600 | MS.gene070436:intron | 30.0% |
| !! | CATCAACAAAGTGTTTTTGA+AGG | - | chr3.3:25511094-25511113 | MS.gene070436:CDS | 30.0% |
| !! | CTACAAAATTAGCTTGCAAA+GGG | + | chr3.3:25513636-25513655 | None:intergenic | 30.0% |
| !! | GCATATCCATAAGTTGTTTT+CGG | + | chr3.3:25511952-25511971 | None:intergenic | 30.0% |
| !! | GGTGATAAGTAGTTGTTTTA+AGG | - | chr3.3:25511270-25511289 | MS.gene070436:intron | 30.0% |
| !! | GTTTGATTTGGCTTATATGA+TGG | + | chr3.3:25511987-25512006 | None:intergenic | 30.0% |
| !! | TATAGAACTACCTAGTTTTC+TGG | - | chr3.3:25512038-25512057 | MS.gene070436:intron | 30.0% |
| !!! | CCAAATGTTTTATTTTTGCC+GGG | - | chr3.3:25511352-25511371 | MS.gene070436:intron | 30.0% |
| !!! | TAAGTAGTTGTTTTAAGGGA+TGG | - | chr3.3:25511275-25511294 | MS.gene070436:intron | 30.0% |
| AAAAGGAAATGCCAGATAGT+TGG | + | chr3.3:25513747-25513766 | None:intergenic | 35.0% | |
| AATGAGGAAGGAATAACATG+AGG | + | chr3.3:25513835-25513854 | None:intergenic | 35.0% | |
| ATATGTTAAGAGTCGCACAT+TGG | - | chr3.3:25513564-25513583 | MS.gene070436:CDS | 35.0% | |
| ATTAGAAACCTAGAGTCTGA+TGG | - | chr3.3:25513943-25513962 | MS.gene070436:CDS | 35.0% | |
| CCCGGCAAAAATAAAACATT+TGG | + | chr3.3:25511355-25511374 | None:intergenic | 35.0% | |
| CGCAGATCATTCAATAAATG+TGG | - | chr3.3:25513123-25513142 | MS.gene070436:intron | 35.0% | |
| GATGAAGGAAGAGATATTGT+AGG | - | chr3.3:25511178-25511197 | MS.gene070436:intron | 35.0% | |
| GCTGAAATCTGTAATGTTAC+TGG | - | chr3.3:25512458-25512477 | MS.gene070436:CDS | 35.0% | |
| GTGTTCATAACTTGACAACA+TGG | + | chr3.3:25510947-25510966 | None:intergenic | 35.0% | |
| GTTACACCTTTCACTAAATG+AGG | + | chr3.3:25512678-25512697 | None:intergenic | 35.0% | |
| TACTAATGGCACGTTTGATT+TGG | + | chr3.3:25511999-25512018 | None:intergenic | 35.0% | |
| TAGTTAGGAATTGCATACCT+CGG | + | chr3.3:25513497-25513516 | None:intergenic | 35.0% | |
| TATAGTTGGAACAATCCGAA+TGG | - | chr3.3:25512084-25512103 | MS.gene070436:intron | 35.0% | |
| TATATTGTAGGCAACTCACT+AGG | - | chr3.3:25512618-25512637 | MS.gene070436:intron | 35.0% | |
| TATTGCCGATGTACTTAATC+AGG | - | chr3.3:25513096-25513115 | MS.gene070436:intron | 35.0% | |
| TCATTATGAGAAGCAGTTGA+TGG | - | chr3.3:25511393-25511412 | MS.gene070436:intron | 35.0% | |
| TGAAGGAAGAGATATTGTAG+GGG | - | chr3.3:25511180-25511199 | MS.gene070436:intron | 35.0% | |
| TGCTATCCTCATTTAGTGAA+AGG | - | chr3.3:25512669-25512688 | MS.gene070436:intron | 35.0% | |
| ! | ACTAATTTTCTCCCACCTAA+AGG | + | chr3.3:25513065-25513084 | None:intergenic | 35.0% |
| ! | ACTTGCCAAAGTATTTCCAT+GGG | - | chr3.3:25512755-25512774 | MS.gene070436:intron | 35.0% |
| ! | AGTACATCGGCAATACTTTT+TGG | + | chr3.3:25513091-25513110 | None:intergenic | 35.0% |
| ! | CATGATTTTTGTTGCGTTGA+TGG | - | chr3.3:25512265-25512284 | MS.gene070436:CDS | 35.0% |
| ! | CCTTTGCAAGCTAATTTTGT+AGG | - | chr3.3:25513634-25513653 | MS.gene070436:CDS | 35.0% |
| ! | TTTTAGATGTCGAGCAAACA+AGG | - | chr3.3:25513336-25513355 | MS.gene070436:intron | 35.0% |
| !! | AAAATTAGCTTGCAAAGGGA+CGG | + | chr3.3:25513632-25513651 | None:intergenic | 35.0% |
| !! | ATTGATTCGTTACAGGTCAT+CGG | - | chr3.3:25512585-25512604 | MS.gene070436:intron | 35.0% |
| !! | CCTACAAAATTAGCTTGCAA+AGG | + | chr3.3:25513637-25513656 | None:intergenic | 35.0% |
| !! | TTACAGAGTTGGTGTAAGTA+TGG | - | chr3.3:25512814-25512833 | MS.gene070436:intron | 35.0% |
| !!! | GTTTTATTTTTGCCGGGTTT+CGG | - | chr3.3:25511358-25511377 | MS.gene070436:intron | 35.0% |
| AAAGGAGCAGGATCTTCAAA+AGG | + | chr3.3:25511478-25511497 | None:intergenic | 40.0% | |
| AGAAGTAGCTGTGAATGAGA+GGG | + | chr3.3:25512216-25512235 | None:intergenic | 40.0% | |
| AGTTAGGAATTGCATACCTC+GGG | + | chr3.3:25513496-25513515 | None:intergenic | 40.0% | |
| AGTTCGGTACTTCATTGAAG+AGG | - | chr3.3:25511612-25511631 | MS.gene070436:CDS | 40.0% | |
| ATTCTATTCCAAGTCCAAGG+AGG | - | chr3.3:25514122-25514141 | MS.gene070436:CDS | 40.0% | |
| CCAAATCCAGTAAAATCTCC+TGG | - | chr3.3:25512732-25512751 | MS.gene070436:intron | 40.0% | |
| CCTTCAGCGAAACATTATCA+AGG | - | chr3.3:25513239-25513258 | MS.gene070436:intron | 40.0% | |
| CTGAAGGATAATTCTCCTTG+GGG | + | chr3.3:25513226-25513245 | None:intergenic | 40.0% | |
| GAGGGACTACAGGAATAAAA+TGG | + | chr3.3:25512198-25512217 | None:intergenic | 40.0% | |
| GAGTTGCCTACAATATAGAC+TGG | + | chr3.3:25512615-25512634 | None:intergenic | 40.0% | |
| GCTGAAGGATAATTCTCCTT+GGG | + | chr3.3:25513227-25513246 | None:intergenic | 40.0% | |
| GGTGAACCAGTCTATATTGT+AGG | - | chr3.3:25512606-25512625 | MS.gene070436:intron | 40.0% | |
| GTACGGAAAAGAAGATCCTT+GGG | - | chr3.3:25513375-25513394 | MS.gene070436:intron | 40.0% | |
| TATTATCAAATCAGCCCTGC+TGG | - | chr3.3:25513448-25513467 | MS.gene070436:CDS | 40.0% | |
| TCAATTATGTTTGCTCCCCA+AGG | - | chr3.3:25513208-25513227 | MS.gene070436:intron | 40.0% | |
| TCGCAAAGGAATGACTACAT+TGG | + | chr3.3:25512936-25512955 | None:intergenic | 40.0% | |
| TCGCACATTGGATATGAGAT+AGG | - | chr3.3:25513576-25513595 | MS.gene070436:CDS | 40.0% | |
| TGTACGGAAAAGAAGATCCT+TGG | - | chr3.3:25513374-25513393 | MS.gene070436:intron | 40.0% | |
| TTAACCTGAAGTCCCCATAT+AGG | + | chr3.3:25513406-25513425 | None:intergenic | 40.0% | |
| TTTCCGTACATGAGGCAAAT+CGG | + | chr3.3:25513364-25513383 | None:intergenic | 40.0% | |
| TTTGGAAGAAACCCCCAAAA+AGG | + | chr3.3:25512717-25512736 | None:intergenic | 40.0% | |
| ! | CCAGGAGATTTTACTGGATT+TGG | + | chr3.3:25512735-25512754 | None:intergenic | 40.0% |
| ! | CTCCTTTGTCTAAGGTAGAA+GGG | - | chr3.3:25511491-25511510 | MS.gene070436:intron | 40.0% |
| ! | CTTAATGCAACGCCTTTTTG+GGG | - | chr3.3:25512702-25512721 | MS.gene070436:intron | 40.0% |
| ! | GACTTGCCAAAGTATTTCCA+TGG | - | chr3.3:25512754-25512773 | MS.gene070436:intron | 40.0% |
| ! | GATCTTCTTTTCCGTACATG+AGG | + | chr3.3:25513372-25513391 | None:intergenic | 40.0% |
| ! | GCTTAATGCAACGCCTTTTT+GGG | - | chr3.3:25512701-25512720 | MS.gene070436:intron | 40.0% |
| ! | GTGTCTATTTCTTCAAGCAG+AGG | + | chr3.3:25513982-25514001 | None:intergenic | 40.0% |
| ! | TATGGGGACTTCAGGTTAAA+AGG | - | chr3.3:25513407-25513426 | MS.gene070436:intron | 40.0% |
| ! | TCCTTTGTCTAAGGTAGAAG+GGG | - | chr3.3:25511492-25511511 | MS.gene070436:intron | 40.0% |
| ! | TCTTTGGTTTAGGTCCTCAT+TGG | - | chr3.3:25511786-25511805 | MS.gene070436:intron | 40.0% |
| ! | TGCTTAATGCAACGCCTTTT+TGG | - | chr3.3:25512700-25512719 | MS.gene070436:intron | 40.0% |
| ! | TTAATGCAACGCCTTTTTGG+GGG | - | chr3.3:25512703-25512722 | MS.gene070436:intron | 40.0% |
| !! | CCTTGATAATGTTTCGCTGA+AGG | + | chr3.3:25513242-25513261 | None:intergenic | 40.0% |
| !! | GAGAAGCAGTTGATGGATTT+AGG | - | chr3.3:25511400-25511419 | MS.gene070436:intron | 40.0% |
| !! | GCAGGGCTGATTTGATAATA+AGG | + | chr3.3:25513448-25513467 | None:intergenic | 40.0% |
| !! | GGAATCAAAACCTTTGAAGC+AGG | + | chr3.3:25511214-25511233 | None:intergenic | 40.0% |
| !!! | AGGTCGTGATTTTCGAGTTT+GGG | - | chr3.3:25511420-25511439 | MS.gene070436:intron | 40.0% |
| !!! | GCTTCAAAGGTTTTGATTCC+TGG | - | chr3.3:25511214-25511233 | MS.gene070436:intron | 40.0% |
| !!! | GGTTTTGATTCCTGGTTTAC+CGG | - | chr3.3:25511222-25511241 | MS.gene070436:intron | 40.0% |
| !!! | TAGGTCGTGATTTTCGAGTT+TGG | - | chr3.3:25511419-25511438 | MS.gene070436:intron | 40.0% |
| AAAGAACCAACACCGAAACC+CGG | + | chr3.3:25511373-25511392 | None:intergenic | 45.0% | |
| ACAACTACTTATCACCGCAC+CGG | + | chr3.3:25511266-25511285 | None:intergenic | 45.0% | |
| ACCCCTTCTACCTTAGACAA+AGG | + | chr3.3:25511496-25511515 | None:intergenic | 45.0% | |
| AGAGTGTATCCAAGATCCGT+TGG | - | chr3.3:25513702-25513721 | MS.gene070436:CDS | 45.0% | |
| AGATCCTGCTCCTTTGTCTA+AGG | - | chr3.3:25511483-25511502 | MS.gene070436:intron | 45.0% | |
| AGATTCAACTACCACCTCCT+TGG | + | chr3.3:25514139-25514158 | None:intergenic | 45.0% | |
| AGTGGAAATGTTTCGCCTTG+GGG | - | chr3.3:25511523-25511542 | MS.gene070436:intron | 45.0% | |
| ATCCTTGGGTGACACCTATA+TGG | - | chr3.3:25513389-25513408 | MS.gene070436:intron | 45.0% | |
| ATTGTAGGCAACTCACTAGG+AGG | - | chr3.3:25512621-25512640 | MS.gene070436:intron | 45.0% | |
| CAGAAGTAGCTGTGAATGAG+AGG | + | chr3.3:25512217-25512236 | None:intergenic | 45.0% | |
| CGCTGAAGGATAATTCTCCT+TGG | + | chr3.3:25513228-25513247 | None:intergenic | 45.0% | |
| CTATTGGGTCACCAACTATC+TGG | - | chr3.3:25513733-25513752 | MS.gene070436:CDS | 45.0% | |
| GAAAGCTGGGTGTGAAAATG+TGG | - | chr3.3:25511324-25511343 | MS.gene070436:intron | 45.0% | |
| GAGTGGAAATGTTTCGCCTT+GGG | - | chr3.3:25511522-25511541 | MS.gene070436:intron | 45.0% | |
| GAGTGTATCCAAGATCCGTT+GGG | - | chr3.3:25513703-25513722 | MS.gene070436:CDS | 45.0% | |
| GATGAATCCAACGGTGAATC+CGG | - | chr3.3:25511244-25511263 | MS.gene070436:intron | 45.0% | |
| GATTCACCGTTGGATTCATC+CGG | + | chr3.3:25511244-25511263 | None:intergenic | 45.0% | |
| GGAAATACTTTGGCAAGTCC+AGG | + | chr3.3:25512753-25512772 | None:intergenic | 45.0% | |
| GGTAAATGACCTGCACTGTT+TGG | - | chr3.3:25511633-25511652 | MS.gene070436:CDS | 45.0% | |
| GGTTTACCGGATGAATCCAA+CGG | - | chr3.3:25511235-25511254 | MS.gene070436:intron | 45.0% | |
| GTTAGGAATTGCATACCTCG+GGG | + | chr3.3:25513495-25513514 | None:intergenic | 45.0% | |
| GTTTCATCTCCAAAACCCCA+AGG | + | chr3.3:25511541-25511560 | None:intergenic | 45.0% | |
| TCCTTGGGTGACACCTATAT+GGG | - | chr3.3:25513390-25513409 | MS.gene070436:intron | 45.0% | |
| TCTACCTTAGACAAAGGAGC+AGG | + | chr3.3:25511490-25511509 | None:intergenic | 45.0% | |
| TGAAGGTAGAGGGAATGTTC+CGG | + | chr3.3:25512781-25512800 | None:intergenic | 45.0% | |
| TGCCTCAAGTGTCTCACTTT+GGG | - | chr3.3:25514077-25514096 | MS.gene070436:CDS | 45.0% | |
| TTGCCTCAAGTGTCTCACTT+TGG | - | chr3.3:25514076-25514095 | MS.gene070436:CDS | 45.0% | |
| TTGCTGATACCAAACAGTGC+AGG | + | chr3.3:25511645-25511664 | None:intergenic | 45.0% | |
| TTGGATTCATCCGGTAAACC+AGG | + | chr3.3:25511235-25511254 | None:intergenic | 45.0% | |
| ! | AATGTTTCGCCTTGGGGTTT+TGG | - | chr3.3:25511529-25511548 | MS.gene070436:intron | 45.0% |
| ! | GCAAGTCCAGGAGATTTTAC+TGG | + | chr3.3:25512741-25512760 | None:intergenic | 45.0% |
| ! | GCTCCTTTGTCTAAGGTAGA+AGG | - | chr3.3:25511490-25511509 | MS.gene070436:intron | 45.0% |
| ! | GGGACTTCAGGTTAAAAGGA+AGG | - | chr3.3:25513411-25513430 | MS.gene070436:intron | 45.0% |
| ! | GGTTGATGTACCTGCTTCAA+AGG | - | chr3.3:25511201-25511220 | MS.gene070436:intron | 45.0% |
| !! | ATAGTTGGTGACCCAATAGC+AGG | + | chr3.3:25513732-25513751 | None:intergenic | 45.0% |
| !!! | GCGTTGGATTTTCTAGGACA+AGG | - | chr3.3:25511442-25511461 | MS.gene070436:intron | 45.0% |
| !!! | GTTTGGGCGTTGGATTTTCT+AGG | - | chr3.3:25511436-25511455 | MS.gene070436:intron | 45.0% |
| !!! | TGATTTTCGAGTTTGGGCGT+TGG | - | chr3.3:25511426-25511445 | MS.gene070436:intron | 45.0% |
| AACTACCACCTCCTTGGACT+TGG | + | chr3.3:25514133-25514152 | None:intergenic | 50.0% | |
| ACTGCTGATAGTACACCTCC+AGG | - | chr3.3:25512989-25513008 | MS.gene070436:intron | 50.0% | |
| AGAGAGAGCCATCAGACTCT+AGG | + | chr3.3:25513954-25513973 | None:intergenic | 50.0% | |
| CCTTGGGTGACACCTATATG+GGG | - | chr3.3:25513391-25513410 | MS.gene070436:intron | 50.0% | |
| CGAGTGGAAATGTTTCGCCT+TGG | - | chr3.3:25511521-25511540 | MS.gene070436:intron | 50.0% | |
| CTATTCCAAGTCCAAGGAGG+TGG | - | chr3.3:25514125-25514144 | MS.gene070436:CDS | 50.0% | |
| CTGTGAATGAGAGGGACTAC+AGG | + | chr3.3:25512208-25512227 | None:intergenic | 50.0% | |
| GACACCTATATGGGGACTTC+AGG | - | chr3.3:25513399-25513418 | MS.gene070436:intron | 50.0% | |
| GGCGACTGAGCTTGTGTATT+CGG | - | chr3.3:25511570-25511589 | MS.gene070436:intron | 50.0% | |
| GTAGAAGGGGTTATGTCGAG+TGG | - | chr3.3:25511505-25511524 | MS.gene070436:intron | 50.0% | |
| GTCCCAAAGTGAGACACTTG+AGG | + | chr3.3:25514082-25514101 | None:intergenic | 50.0% | |
| TAGATACGATAAGGGGCTCC+TGG | + | chr3.3:25513010-25513029 | None:intergenic | 50.0% | |
| TCCGGCCCATGGAAATACTT+TGG | + | chr3.3:25512763-25512782 | None:intergenic | 50.0% | |
| TGGAGATGAAACCGAACCGT+GGG | - | chr3.3:25511549-25511568 | MS.gene070436:intron | 50.0% | |
| TTGGAGATGAAACCGAACCG+TGG | - | chr3.3:25511548-25511567 | MS.gene070436:intron | 50.0% | |
| ! | GCCAAAGTATTTCCATGGGC+CGG | - | chr3.3:25512759-25512778 | MS.gene070436:intron | 50.0% |
| !! | CAAGTGTCTCACTTTGGGAC+AGG | - | chr3.3:25514082-25514101 | MS.gene070436:CDS | 50.0% |
| !! | GTGCCGATTTGCCTCATGTA+CGG | - | chr3.3:25513358-25513377 | MS.gene070436:intron | 50.0% |
| !! | TTTTTGCCGGGTTTCGGTGT+TGG | - | chr3.3:25511364-25511383 | MS.gene070436:intron | 50.0% |
| ACCTCGGGGACTTCATCATG+AGG | + | chr3.3:25513481-25513500 | None:intergenic | 55.0% | |
| ATACGATAAGGGGCTCCTGG+AGG | + | chr3.3:25513007-25513026 | None:intergenic | 55.0% | |
| ATCCAACGGTGAATCCGGTG+CGG | - | chr3.3:25511249-25511268 | MS.gene070436:intron | 55.0% | |
| CCTCGGGGACTTCATCATGA+GGG | + | chr3.3:25513480-25513499 | None:intergenic | 55.0% | |
| TACACAAGCTCAGTCGCCCA+CGG | + | chr3.3:25511568-25511587 | None:intergenic | 55.0% | |
| TGCAGCAGCAGGATGTCTTG+TGG | + | chr3.3:25513176-25513195 | None:intergenic | 55.0% | |
| ! | CCCCATATAGGTGTCACCCA+AGG | + | chr3.3:25513394-25513413 | None:intergenic | 55.0% |
| !! | GTTGGTGACCCAATAGCAGG+TGG | + | chr3.3:25513729-25513748 | None:intergenic | 55.0% |
| AAGCTCAGTCGCCCACGGTT+CGG | + | chr3.3:25511563-25511582 | None:intergenic | 60.0% | |
| AGAGGGAATGTTCCGGCCCA+TGG | + | chr3.3:25512774-25512793 | None:intergenic | 60.0% | |
| CATGAGGGCAGTGACCAGCA+GGG | + | chr3.3:25513465-25513484 | None:intergenic | 60.0% | |
| CCCAATAGCAGGTGGCCCAA+CGG | + | chr3.3:25513721-25513740 | None:intergenic | 60.0% | |
| CCCTCATGATGAAGTCCCCG+AGG | - | chr3.3:25513477-25513496 | MS.gene070436:CDS | 60.0% | |
| CCGTTGGGCCACCTGCTATT+GGG | - | chr3.3:25513718-25513737 | MS.gene070436:CDS | 60.0% | |
| GCAAATGAGGCTGCAGCAGC+AGG | + | chr3.3:25513187-25513206 | None:intergenic | 60.0% | |
| TCATGAGGGCAGTGACCAGC+AGG | + | chr3.3:25513466-25513485 | None:intergenic | 60.0% | |
| TCCGTTGGGCCACCTGCTAT+TGG | - | chr3.3:25513717-25513736 | MS.gene070436:CDS | 60.0% | |
| CACCGCACCGGATTCACCGT+TGG | + | chr3.3:25511254-25511273 | None:intergenic | 65.0% | |
| GCAGGTGGCCCAACGGATCT+TGG | + | chr3.3:25513714-25513733 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 25510917 | 25514164 | 25510917 | ID=MS.gene070436 |
| chr3.3 | mRNA | 25510917 | 25514164 | 25510917 | ID=MS.gene070436.t1;Parent=MS.gene070436 |
| chr3.3 | exon | 25513448 | 25514164 | 25513448 | ID=MS.gene070436.t1.exon1;Parent=MS.gene070436.t1 |
| chr3.3 | CDS | 25513448 | 25514164 | 25513448 | ID=cds.MS.gene070436.t1;Parent=MS.gene070436.t1 |
| chr3.3 | exon | 25512255 | 25512481 | 25512255 | ID=MS.gene070436.t1.exon2;Parent=MS.gene070436.t1 |
| chr3.3 | CDS | 25512255 | 25512481 | 25512255 | ID=cds.MS.gene070436.t1;Parent=MS.gene070436.t1 |
| chr3.3 | exon | 25511821 | 25512012 | 25511821 | ID=MS.gene070436.t1.exon3;Parent=MS.gene070436.t1 |
| chr3.3 | CDS | 25511821 | 25512012 | 25511821 | ID=cds.MS.gene070436.t1;Parent=MS.gene070436.t1 |
| chr3.3 | exon | 25511583 | 25511739 | 25511583 | ID=MS.gene070436.t1.exon4;Parent=MS.gene070436.t1 |
| chr3.3 | CDS | 25511583 | 25511739 | 25511583 | ID=cds.MS.gene070436.t1;Parent=MS.gene070436.t1 |
| chr3.3 | exon | 25510917 | 25511165 | 25510917 | ID=MS.gene070436.t1.exon5;Parent=MS.gene070436.t1 |
| chr3.3 | CDS | 25510917 | 25511165 | 25510917 | ID=cds.MS.gene070436.t1;Parent=MS.gene070436.t1 |
| Gene Sequence |
| Protein sequence |
