Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070444.t1 | XP_024634054.1 | 87.3 | 55 | 7 | 0 | 1 | 55 | 33 | 87 | 4.00E-16 | 95.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070444.t1 | G7IZL7 | 87.3 | 55 | 7 | 0 | 1 | 55 | 33 | 87 | 2.9e-16 | 95.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049711 | MS.gene070444 | 0.821099 | 4.83E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene070444 | 0.827659 | 1.38E-54 | -1.69E-46 |
| MS.gene05422 | MS.gene070444 | 0.801298 | 9.62E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene070444 | 0.804106 | 2.53E-49 | -1.69E-46 |
| MS.gene056169 | MS.gene070444 | 0.803323 | 3.68E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene070444 | 0.821133 | 4.75E-53 | -1.69E-46 |
| MS.gene059276 | MS.gene070444 | 0.82575 | 3.95E-54 | -1.69E-46 |
| MS.gene059634 | MS.gene070444 | 0.825583 | 4.33E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070444.t1 | MTR_3g034640 | 81.742 | 356 | 65 | 0 | 1 | 356 | 33 | 388 | 0.0 | 538 |
| MS.gene070444.t1 | MTR_3g034640 | 72.308 | 325 | 90 | 0 | 33 | 357 | 169 | 493 | 1.68e-156 | 449 |
| MS.gene070444.t1 | MTR_3g034610 | 72.222 | 378 | 82 | 1 | 1 | 355 | 1 | 378 | 0.0 | 509 |
| MS.gene070444.t1 | MTR_3g034610 | 66.298 | 181 | 61 | 0 | 176 | 356 | 43 | 223 | 6.13e-71 | 227 |
| MS.gene070444.t1 | MTR_3g116430 | 62.189 | 402 | 99 | 5 | 1 | 353 | 33 | 430 | 6.55e-151 | 432 |
| MS.gene070444.t1 | MTR_3g116430 | 61.654 | 266 | 93 | 2 | 91 | 356 | 46 | 302 | 6.41e-95 | 289 |
| MS.gene070444.t1 | MTR_3g107810 | 50.562 | 356 | 166 | 1 | 1 | 356 | 33 | 378 | 5.71e-114 | 340 |
| MS.gene070444.t1 | MTR_3g107810 | 49.231 | 325 | 165 | 0 | 32 | 356 | 132 | 456 | 1.43e-102 | 310 |
| MS.gene070444.t1 | MTR_3g107810 | 47.988 | 323 | 164 | 1 | 32 | 354 | 158 | 476 | 1.24e-96 | 295 |
| MS.gene070444.t1 | MTR_3g116440 | 56.418 | 335 | 129 | 4 | 1 | 328 | 33 | 357 | 7.67e-110 | 325 |
| MS.gene070444.t1 | MTR_4g069810 | 33.699 | 365 | 211 | 15 | 1 | 354 | 34 | 378 | 4.42e-42 | 151 |
| MS.gene070444.t1 | MTR_4g069810 | 37.500 | 184 | 106 | 6 | 175 | 355 | 77 | 254 | 4.50e-27 | 110 |
| MS.gene070444.t1 | MTR_4g069810 | 36.994 | 173 | 95 | 10 | 32 | 200 | 218 | 380 | 4.08e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 80 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACCCAACATTTCGGCTTA+TGG | 0.203861 | 3.3:+25368463 | MS.gene070444:CDS |
| AGACCCAATATTTCAGCTTA+TGG | 0.257106 | 3.3:+25368619 | MS.gene070444:CDS |
| TTCTTCATAAGCTGAAATAT+TGG | 0.263465 | 3.3:-25368233 | None:intergenic |
| TTCTCCATAAGCTGAAATAT+TGG | 0.263465 | 3.3:-25368623 | None:intergenic |
| CGGCCCAACATTTCAGCTTA+TGG | 0.267437 | 3.3:+25368775 | MS.gene070444:CDS |
| AGACCCAACCTTTCAGCTTA+TGG | 0.270126 | 3.3:+25368385 | MS.gene070444:CDS |
| AGACCCAACCTTTCAGCTTA+TGG | 0.270126 | 3.3:+25368697 | MS.gene070444:CDS |
| CGGCCTTGGTTCAAAATCTT+TGG | 0.278983 | 3.3:-25368914 | None:intergenic |
| AGACCCAACATTTCAGCTTA+TGG | 0.288132 | 3.3:+25368073 | MS.gene070444:CDS |
| TCTCCATATGCTGAAATATT+CGG | 0.293638 | 3.3:-25368934 | None:intergenic |
| TCTCTGCATACTAAATTATT+AGG | 0.299986 | 3.3:-25368544 | None:intergenic |
| GCACTAACACCAAGGAAAAT+AGG | 0.310048 | 3.3:+25368026 | MS.gene070444:CDS |
| TCTTCATAAGCTGAAATATT+GGG | 0.325273 | 3.3:-25368232 | None:intergenic |
| AGACCAAACATTTCAGCTTA+TGG | 0.326139 | 3.3:+25368853 | MS.gene070444:CDS |
| TCTCCATAAGCTGAAATATT+GGG | 0.337654 | 3.3:-25368622 | None:intergenic |
| AGACCCAACATTCCAGCTTA+TGG | 0.349627 | 3.3:+25368307 | MS.gene070444:CDS |
| TCTTGGTTCGAAATCTTTGC+CGG | 0.362236 | 3.3:-25368521 | None:intergenic |
| TCTCCGTAAGCTGAAATATT+AGG | 0.367030 | 3.3:-25368154 | None:intergenic |
| TGAACCACGACCCAACATTT+CGG | 0.373762 | 3.3:+25368456 | MS.gene070444:CDS |
| CATACTAAATTATTAGGTCT+TGG | 0.374417 | 3.3:-25368538 | None:intergenic |
| CTCTTTAAACGCCTTCTCTT+GGG | 0.386533 | 3.3:-25367960 | None:intergenic |
| AGGAGTCCTTGAATTTCTTC+CGG | 0.394452 | 3.3:-25367908 | None:intergenic |
| TCTCCATAAGCTGGAATGTT+GGG | 0.397859 | 3.3:-25368310 | None:intergenic |
| AGGCCGAATATTTCAGCATA+TGG | 0.414557 | 3.3:+25368931 | MS.gene070444:CDS |
| CCTCTTTAAACGCCTTCTCT+TGG | 0.415993 | 3.3:-25367961 | None:intergenic |
| TAAGCTGGAATGTTGGGTCT+TGG | 0.425074 | 3.3:-25368304 | None:intergenic |
| TAAGCTGAAATATTGGGTCT+TGG | 0.427019 | 3.3:-25368226 | None:intergenic |
| AGACAATGCCATAGATGTTA+AGG | 0.431710 | 3.3:+25368096 | MS.gene070444:CDS |
| AGACAATGCCATAGATGTTA+AGG | 0.431710 | 3.3:+25368486 | MS.gene070444:CDS |
| TATGCTGAAATATTGGGTCT+TGG | 0.433141 | 3.3:-25367992 | None:intergenic |
| GAATTTCTTCCGGTATGTCT+TGG | 0.435144 | 3.3:-25367898 | None:intergenic |
| TAAGCTGAAATGTTTGGTCT+TGG | 0.436584 | 3.3:-25368850 | None:intergenic |
| TCTTGGTTCAAAATCGTTAG+TGG | 0.450623 | 3.3:-25368833 | None:intergenic |
| TTGCCATAAGCTGAAATGTT+TGG | 0.452597 | 3.3:-25368856 | None:intergenic |
| TAAGCTGAAATATTAGGTCT+TGG | 0.457286 | 3.3:-25368148 | None:intergenic |
| TAAGCTGAAATGTTGGGTCT+TGG | 0.464437 | 3.3:-25368070 | None:intergenic |
| AGACCTAATATTTCAGCTTA+CGG | 0.471619 | 3.3:+25368151 | MS.gene070444:CDS |
| TAAGCTGAAAGGTTGGGTCT+TGG | 0.472560 | 3.3:-25368382 | None:intergenic |
| TAAGCTGAAAGGTTGGGTCT+TGG | 0.472560 | 3.3:-25368694 | None:intergenic |
| TAAGCTGAAATATTGGGTCT+TGG | 0.475627 | 3.3:-25368616 | None:intergenic |
| TCTTGGTTCGAAATCATTAG+TGG | 0.478546 | 3.3:-25368365 | None:intergenic |
| TCTTGGTTCGAAATCATTAG+TGG | 0.478546 | 3.3:-25368677 | None:intergenic |
| CATCAATGTTAATGAAAAGA+AGG | 0.479543 | 3.3:+25368417 | MS.gene070444:CDS |
| TATGCTGAAATATTCGGCCT+TGG | 0.481023 | 3.3:-25368928 | None:intergenic |
| TCGTGGTTCAAAATCCTTAG+TGG | 0.493289 | 3.3:-25368443 | None:intergenic |
| TGACATTGACACCAAGGAAA+AGG | 0.493430 | 3.3:+25368882 | MS.gene070444:CDS |
| TCTCCATAAGCTGAAATGTT+GGG | 0.499953 | 3.3:-25368076 | None:intergenic |
| TGAAAAGAAGGCAACCACTA+AGG | 0.503132 | 3.3:+25368429 | MS.gene070444:CDS |
| TCTCCATAAGCCGAAATGTT+GGG | 0.507314 | 3.3:-25368466 | None:intergenic |
| TCTCCATAAGCTGAAATGTT+GGG | 0.510874 | 3.3:-25368778 | None:intergenic |
| ATTTCAGCATATGAAAATGA+TGG | 0.513488 | 3.3:+25368004 | MS.gene070444:CDS |
| CCTCCATAAGCTGAAAGGTT+GGG | 0.514294 | 3.3:-25368388 | None:intergenic |
| TCTCCATAAGCTGAAAGGTT+GGG | 0.521820 | 3.3:-25368700 | None:intergenic |
| ATCTCCATAAGCTGAAATGT+TGG | 0.531489 | 3.3:-25368779 | None:intergenic |
| TTCTCCATAAGCTGGAATGT+TGG | 0.533757 | 3.3:-25368311 | None:intergenic |
| GTCTCCATAAGCTGAAATGT+TGG | 0.536347 | 3.3:-25368077 | None:intergenic |
| AGAAAATGAAATTGATGTCA+AGG | 0.537174 | 3.3:+25368642 | MS.gene070444:CDS |
| CTCTCCATAAGCTGAAAGGT+TGG | 0.542939 | 3.3:-25368701 | None:intergenic |
| CTTGGTTCAAAATCAGTAGC+GGG | 0.545604 | 3.3:-25368286 | None:intergenic |
| GGAAAATAGGAAAGATGTCA+AGG | 0.549058 | 3.3:+25368039 | MS.gene070444:CDS |
| CCCTCCATAAGCTGAAAGGT+TGG | 0.552045 | 3.3:-25368389 | None:intergenic |
| CATGAAAGACCAAGACATAC+CGG | 0.552278 | 3.3:+25367889 | None:intergenic |
| CCAAGAGAAGGCGTTTAAAG+AGG | 0.553443 | 3.3:+25367961 | MS.gene070444:CDS |
| GTCTCCATAAGCCGAAATGT+TGG | 0.565387 | 3.3:-25368467 | None:intergenic |
| GTTAAGGAAAAGAAGAAAGC+CGG | 0.571985 | 3.3:+25368502 | MS.gene070444:CDS |
| CATTCTCTCCATAAGCTGAA+AGG | 0.576292 | 3.3:-25368705 | None:intergenic |
| GACATACCGGAAGAAATTCA+AGG | 0.576602 | 3.3:+25367902 | MS.gene070444:CDS |
| TAAGCTGAAATGTTGGGCCG+TGG | 0.583691 | 3.3:-25368772 | None:intergenic |
| CCCAACCTTTCAGCTTATGG+AGG | 0.585012 | 3.3:+25368388 | MS.gene070444:CDS |
| CATTCCCTCCATAAGCTGAA+AGG | 0.591945 | 3.3:-25368393 | None:intergenic |
| TAAGCCGAAATGTTGGGTCG+TGG | 0.608895 | 3.3:-25368460 | None:intergenic |
| CCAACCTTTCAGCTTATGGA+GGG | 0.614988 | 3.3:+25368389 | MS.gene070444:CDS |
| TAAGCTCAATACCCAAGAGA+AGG | 0.615378 | 3.3:+25367949 | MS.gene070444:CDS |
| ATTGATGCAAAGGAAAAGAA+CGG | 0.631469 | 3.3:+25368808 | MS.gene070444:CDS |
| AGATGATGCCATTGATGCAA+AGG | 0.631796 | 3.3:+25368798 | MS.gene070444:CDS |
| TCTTGGTTCAAAATCAGTAG+CGG | 0.646747 | 3.3:-25368287 | None:intergenic |
| CAACAATGACATTGACACCA+AGG | 0.659301 | 3.3:+25368876 | MS.gene070444:CDS |
| TATGGAGAGAATGACATCGA+TGG | 0.661268 | 3.3:+25368715 | MS.gene070444:CDS |
| CCGTGGTTCAAAATCCTCAG+TGG | 0.686559 | 3.3:-25368755 | None:intergenic |
| AAATGATGGCACTAACACCA+AGG | 0.697304 | 3.3:+25368018 | MS.gene070444:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGATGTTAAGAAAAAGAA+GGG | + | chr3.3:25368574-25368593 | MS.gene070444:CDS | 20.0% |
| !!! | ATTTTCATATGCTGAAATAT+TGG | - | chr3.3:25368002-25368021 | None:intergenic | 20.0% |
| !!! | TTTTCATATGCTGAAATATT+GGG | - | chr3.3:25368001-25368020 | None:intergenic | 20.0% |
| ! | AGAAAATGAAATTGATGTCA+AGG | + | chr3.3:25368642-25368661 | MS.gene070444:CDS | 25.0% |
| ! | ATTTCAGCATATGAAAATGA+TGG | + | chr3.3:25368004-25368023 | MS.gene070444:CDS | 25.0% |
| ! | CATACTAAATTATTAGGTCT+TGG | - | chr3.3:25368541-25368560 | None:intergenic | 25.0% |
| ! | CATCAATGTTAATGAAAAGA+AGG | + | chr3.3:25368417-25368436 | MS.gene070444:CDS | 25.0% |
| ! | CATTGATGTTAAGAAAAAGA+AGG | + | chr3.3:25368573-25368592 | MS.gene070444:CDS | 25.0% |
| ! | GTTGATGTTAAGAAAAAGAA+GGG | + | chr3.3:25368184-25368203 | MS.gene070444:CDS | 25.0% |
| ! | TCTCTGCATACTAAATTATT+AGG | - | chr3.3:25368547-25368566 | None:intergenic | 25.0% |
| ! | TCTTCATAAGCTGAAATATT+GGG | - | chr3.3:25368235-25368254 | None:intergenic | 25.0% |
| ! | TTCTTCATAAGCTGAAATAT+TGG | - | chr3.3:25368236-25368255 | None:intergenic | 25.0% |
| !! | CTTCTTTTTCTTAACATCAA+TGG | - | chr3.3:25368185-25368204 | None:intergenic | 25.0% |
| AGACCTAATATTTCAGCTTA+CGG | + | chr3.3:25368151-25368170 | MS.gene070444:CDS | 30.0% | |
| ATTGATGCAAAGGAAAAGAA+CGG | + | chr3.3:25368808-25368827 | MS.gene070444:CDS | 30.0% | |
| CATCGATGGTAATAAAAAGA+AGG | + | chr3.3:25368729-25368748 | MS.gene070444:CDS | 30.0% | |
| CGTTGATGTTAAGAAAAAGA+AGG | + | chr3.3:25368183-25368202 | MS.gene070444:CDS | 30.0% | |
| TAAGCTGAAATATTAGGTCT+TGG | - | chr3.3:25368151-25368170 | None:intergenic | 30.0% | |
| TCTCCATAAGCTGAAATATT+GGG | - | chr3.3:25368625-25368644 | None:intergenic | 30.0% | |
| TCTCCATATGCTGAAATATT+CGG | - | chr3.3:25368937-25368956 | None:intergenic | 30.0% | |
| TTCTCCATAAGCTGAAATAT+TGG | - | chr3.3:25368626-25368645 | None:intergenic | 30.0% | |
| ! | CTTCTTTTCCTTAACATCTA+TGG | - | chr3.3:25368107-25368126 | None:intergenic | 30.0% |
| !! | ATTGAGCTTACTTTTAGTGT+TGG | - | chr3.3:25367939-25367958 | None:intergenic | 30.0% |
| AGACAATGCCATAGATGTTA+AGG | + | chr3.3:25368096-25368115 | MS.gene070444:CDS | 35.0% | |
| AGACCAAACATTTCAGCTTA+TGG | + | chr3.3:25368853-25368872 | MS.gene070444:CDS | 35.0% | |
| AGACCCAATATTTCAGCTTA+TGG | + | chr3.3:25368229-25368248 | MS.gene070444:CDS | 35.0% | |
| ATCTCCATAAGCTGAAATGT+TGG | - | chr3.3:25368782-25368801 | None:intergenic | 35.0% | |
| GGAAAATAGGAAAGATGTCA+AGG | + | chr3.3:25368039-25368058 | MS.gene070444:CDS | 35.0% | |
| GTTAAGGAAAAGAAGAAAGC+CGG | + | chr3.3:25368502-25368521 | MS.gene070444:CDS | 35.0% | |
| TAAGCTGAAATATTGGGTCT+TGG | - | chr3.3:25368229-25368248 | None:intergenic | 35.0% | |
| TAAGCTGAAATGTTTGGTCT+TGG | - | chr3.3:25368853-25368872 | None:intergenic | 35.0% | |
| TATGCTGAAATATTGGGTCT+TGG | - | chr3.3:25367995-25368014 | None:intergenic | 35.0% | |
| TCTCCATAAGCTGAAATGTT+GGG | - | chr3.3:25368079-25368098 | None:intergenic | 35.0% | |
| TCTCCGTAAGCTGAAATATT+AGG | - | chr3.3:25368157-25368176 | None:intergenic | 35.0% | |
| TCTTGGTTCAAAATCAGTAG+CGG | - | chr3.3:25368290-25368309 | None:intergenic | 35.0% | |
| TCTTGGTTCAAAATCGTTAG+TGG | - | chr3.3:25368836-25368855 | None:intergenic | 35.0% | |
| TTGCCATAAGCTGAAATGTT+TGG | - | chr3.3:25368859-25368878 | None:intergenic | 35.0% | |
| ! | GACATCTTTCCTATTTTCCT+TGG | - | chr3.3:25368038-25368057 | None:intergenic | 35.0% |
| ! | GTTCTTTTCCTTTGCATCAA+TGG | - | chr3.3:25368809-25368828 | None:intergenic | 35.0% |
| ! | TCTTGGTTCGAAATCATTAG+TGG | - | chr3.3:25368368-25368387 | None:intergenic | 35.0% |
| !!! | ATGTCATTTTCTCCATAAGC+TGG | - | chr3.3:25368322-25368341 | None:intergenic | 35.0% |
| !!! | TACTTTTAGTGTTGGCGATA+AGG | - | chr3.3:25367931-25367950 | None:intergenic | 35.0% |
| AAATGATGGCACTAACACCA+AGG | + | chr3.3:25368018-25368037 | MS.gene070444:CDS | 40.0% | |
| AGACCCAACATTTCAGCTTA+TGG | + | chr3.3:25368073-25368092 | MS.gene070444:CDS | 40.0% | |
| AGATGATGCCATTGATGCAA+AGG | + | chr3.3:25368798-25368817 | MS.gene070444:CDS | 40.0% | |
| AGGAGTCCTTGAATTTCTTC+CGG | - | chr3.3:25367911-25367930 | None:intergenic | 40.0% | |
| AGGCCGAATATTTCAGCATA+TGG | + | chr3.3:25368931-25368950 | MS.gene070444:CDS | 40.0% | |
| CAACAATGACATTGACACCA+AGG | + | chr3.3:25368876-25368895 | MS.gene070444:CDS | 40.0% | |
| CATTCTCTCCATAAGCTGAA+AGG | - | chr3.3:25368708-25368727 | None:intergenic | 40.0% | |
| CTCTTTAAACGCCTTCTCTT+GGG | - | chr3.3:25367963-25367982 | None:intergenic | 40.0% | |
| CTTGGTTCAAAATCAGTAGC+GGG | - | chr3.3:25368289-25368308 | None:intergenic | 40.0% | |
| GAATTTCTTCCGGTATGTCT+TGG | - | chr3.3:25367901-25367920 | None:intergenic | 40.0% | |
| GACATACCGGAAGAAATTCA+AGG | + | chr3.3:25367902-25367921 | MS.gene070444:CDS | 40.0% | |
| GCACTAACACCAAGGAAAAT+AGG | + | chr3.3:25368026-25368045 | MS.gene070444:CDS | 40.0% | |
| GTCTCCATAAGCTGAAATGT+TGG | - | chr3.3:25368080-25368099 | None:intergenic | 40.0% | |
| TAAGCTCAATACCCAAGAGA+AGG | + | chr3.3:25367949-25367968 | MS.gene070444:CDS | 40.0% | |
| TAAGCTGAAATGTTGGGTCT+TGG | - | chr3.3:25368073-25368092 | None:intergenic | 40.0% | |
| TATGCTGAAATATTCGGCCT+TGG | - | chr3.3:25368931-25368950 | None:intergenic | 40.0% | |
| TATGGAGAGAATGACATCGA+TGG | + | chr3.3:25368715-25368734 | MS.gene070444:CDS | 40.0% | |
| TCGTGGTTCAAAATCCTTAG+TGG | - | chr3.3:25368446-25368465 | None:intergenic | 40.0% | |
| TCTCCATAAGCCGAAATGTT+GGG | - | chr3.3:25368469-25368488 | None:intergenic | 40.0% | |
| TCTCCATAAGCTGAAAGGTT+GGG | - | chr3.3:25368703-25368722 | None:intergenic | 40.0% | |
| TCTCCATAAGCTGGAATGTT+GGG | - | chr3.3:25368313-25368332 | None:intergenic | 40.0% | |
| TGAAAAGAAGGCAACCACTA+AGG | + | chr3.3:25368429-25368448 | MS.gene070444:CDS | 40.0% | |
| TGACATTGACACCAAGGAAA+AGG | + | chr3.3:25368882-25368901 | MS.gene070444:CDS | 40.0% | |
| TTCTCCATAAGCTGGAATGT+TGG | - | chr3.3:25368314-25368333 | None:intergenic | 40.0% | |
| ! | CTGCCAAAGATTTTGAACCA+AGG | + | chr3.3:25368911-25368930 | MS.gene070444:CDS | 40.0% |
| ! | TCTTGGTTCGAAATCTTTGC+CGG | - | chr3.3:25368524-25368543 | None:intergenic | 40.0% |
| AGACCCAACATTCCAGCTTA+TGG | + | chr3.3:25368307-25368326 | MS.gene070444:CDS | 45.0% | |
| AGACCCAACCTTTCAGCTTA+TGG | + | chr3.3:25368385-25368404 | MS.gene070444:CDS | 45.0% | |
| CATTCCCTCCATAAGCTGAA+AGG | - | chr3.3:25368396-25368415 | None:intergenic | 45.0% | |
| CCAACCTTTCAGCTTATGGA+GGG | + | chr3.3:25368389-25368408 | MS.gene070444:CDS | 45.0% | |
| CCTCCATAAGCTGAAAGGTT+GGG | - | chr3.3:25368391-25368410 | None:intergenic | 45.0% | |
| CCTCTTTAAACGCCTTCTCT+TGG | - | chr3.3:25367964-25367983 | None:intergenic | 45.0% | |
| CGGCCTTGGTTCAAAATCTT+TGG | - | chr3.3:25368917-25368936 | None:intergenic | 45.0% | |
| CTCTCCATAAGCTGAAAGGT+TGG | - | chr3.3:25368704-25368723 | None:intergenic | 45.0% | |
| GTCTCCATAAGCCGAAATGT+TGG | - | chr3.3:25368470-25368489 | None:intergenic | 45.0% | |
| TAAAAAGAAGGCAGCCACTG+AGG | + | chr3.3:25368741-25368760 | MS.gene070444:CDS | 45.0% | |
| TAAGCTGAAAGGTTGGGTCT+TGG | - | chr3.3:25368385-25368404 | None:intergenic | 45.0% | |
| TAAGCTGGAATGTTGGGTCT+TGG | - | chr3.3:25368307-25368326 | None:intergenic | 45.0% | |
| TGAACCACGACCCAACATTT+CGG | + | chr3.3:25368456-25368475 | MS.gene070444:CDS | 45.0% | |
| ! | CCACTGAGGATTTTGAACCA+CGG | + | chr3.3:25368755-25368774 | MS.gene070444:CDS | 45.0% |
| !! | CCAAGAGAAGGCGTTTAAAG+AGG | + | chr3.3:25367961-25367980 | MS.gene070444:CDS | 45.0% |
| CCCAACCTTTCAGCTTATGG+AGG | + | chr3.3:25368388-25368407 | MS.gene070444:CDS | 50.0% | |
| CCCTCCATAAGCTGAAAGGT+TGG | - | chr3.3:25368392-25368411 | None:intergenic | 50.0% | |
| CCGTGGTTCAAAATCCTCAG+TGG | - | chr3.3:25368758-25368777 | None:intergenic | 50.0% | |
| CGACCCAACATTTCGGCTTA+TGG | + | chr3.3:25368463-25368482 | MS.gene070444:CDS | 50.0% | |
| CGGCCCAACATTTCAGCTTA+TGG | + | chr3.3:25368775-25368794 | MS.gene070444:CDS | 50.0% | |
| TAAGCCGAAATGTTGGGTCG+TGG | - | chr3.3:25368463-25368482 | None:intergenic | 50.0% | |
| TAAGCTGAAATGTTGGGCCG+TGG | - | chr3.3:25368775-25368794 | None:intergenic | 50.0% | |
| ! | GGCAGCTTTCTCCTTTTCCT+TGG | - | chr3.3:25368896-25368915 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 25367890 | 25368963 | 25367890 | ID=MS.gene070444 |
| chr3.3 | mRNA | 25367890 | 25368963 | 25367890 | ID=MS.gene070444.t1;Parent=MS.gene070444 |
| chr3.3 | exon | 25367890 | 25368963 | 25367890 | ID=MS.gene070444.t1.exon1;Parent=MS.gene070444.t1 |
| chr3.3 | CDS | 25367890 | 25368963 | 25367890 | ID=cds.MS.gene070444.t1;Parent=MS.gene070444.t1 |
| Gene Sequence |
| Protein sequence |
