AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070707

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070707.t1 MTR_1g032630 93.120 1032 68 2 2 1031 84 1114 0.0 1989
MS.gene070707.t1 MTR_1g032720 85.659 1032 146 1 2 1031 695 1726 0.0 1826
MS.gene070707.t1 MTR_1g032720 67.216 668 184 8 2 658 86 729 0.0 880
MS.gene070707.t1 MTR_1g032610 83.768 1035 160 2 2 1031 86 1117 0.0 1778
MS.gene070707.t1 MTR_1g032610 83.768 1035 160 2 2 1031 23 1054 0.0 1776
MS.gene070707.t1 MTR_1g032630 92.504 707 50 2 2 706 84 789 0.0 1348
MS.gene070707.t1 MTR_1g032590 56.867 1034 413 8 6 1017 85 1107 0.0 1191
MS.gene070707.t1 MTR_1g032710 90.433 554 53 0 478 1031 1 554 0.0 1019
MS.gene070707.t1 MTR_4g106660 39.242 1055 557 21 6 1008 93 1115 0.0 717
MS.gene070707.t1 MTR_4g106660 47.573 103 54 0 748 850 1110 1212 2.11e-20 98.2
MS.gene070707.t1 MTR_4g106660 39.188 1059 560 21 6 1012 93 1119 0.0 717
MS.gene070707.t1 MTR_3g107390 37.269 1084 579 25 16 1022 132 1191 0.0 630
MS.gene070707.t1 MTR_6g088660 22.604 699 393 31 409 1015 317 959 7.08e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070707.t1 AT1G14790 62.730 1033 376 5 1 1030 80 1106 0.0 1305
MS.gene070707.t1 AT4G11130 38.805 1054 571 20 6 1013 94 1119 0.0 709
MS.gene070707.t1 AT3G49500 36.380 1083 577 32 12 1014 126 1176 1.72e-180 558
MS.gene070707.t1 AT3G49500 36.380 1083 577 32 12 1014 126 1176 1.72e-180 558
MS.gene070707.t1 AT3G49500 36.380 1083 577 32 12 1014 126 1176 1.72e-180 558
MS.gene070707.t1 AT3G49500 36.380 1083 577 32 12 1014 126 1176 1.72e-180 558
MS.gene070707.t1 AT3G49500 36.380 1083 577 32 12 1014 126 1176 1.72e-180 558
MS.gene070707.t1 AT2G19910 24.918 610 341 25 453 1001 401 954 4.52e-22 103
MS.gene070707.t1 AT2G19930 23.781 677 388 28 280 862 198 840 8.20e-22 102
MS.gene070707.t1 AT2G19930 23.781 677 388 28 280 862 204 846 8.75e-22 102
MS.gene070707.t1 AT2G19930 23.382 680 393 26 280 862 198 846 4.40e-21 100
MS.gene070707.t1 AT2G19910 25.043 575 329 24 473 1001 445 963 1.21e-20 99.0
MS.gene070707.t1 AT2G19920 25.000 600 331 27 351 857 267 840 5.04e-18 90.5
MS.gene070707.t1 AT2G19920 24.712 607 338 27 351 864 267 847 5.26e-18 90.1
MS.gene070707.t1 AT2G19920 25.000 600 331 27 351 857 268 841 5.73e-18 90.1
MS.gene070707.t1 AT2G19920 25.000 600 331 27 351 857 281 854 6.09e-18 90.1

Find 235 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGATGCTGCAGACATTT+AGG 0.135808 1.2:+17125648 MS.gene070707:CDS
GTTCAGCACGGCTGTCTTTC+AGG 0.142842 1.2:+17124462 MS.gene070707:CDS
CATGGAAGTTGATGGATTTA+TGG 0.158966 1.2:+17127609 MS.gene070707:CDS
GACGATGTTAAACTGTATTT+TGG 0.159141 1.2:+17122948 MS.gene070707:CDS
CTCTTCTGTTTGTAGTTAAT+TGG 0.176066 1.2:+17124102 MS.gene070707:intron
CCCATCATTGCTCTTCCTTT+TGG 0.190630 1.2:-17125716 None:intergenic
AGCTTTCATATGAGAATATT+TGG 0.191630 1.2:+17123096 MS.gene070707:CDS
ATGGATGCTAGTGTAGATTT+TGG 0.197478 1.2:+17123014 MS.gene070707:CDS
GGTGGGGCTGATGCAGATTC+TGG 0.206112 1.2:+17127841 MS.gene070707:CDS
AGGAAAGATTCTCTGTATTA+TGG 0.218992 1.2:+17122985 MS.gene070707:CDS
TAACATAAAATTGGATGTTT+TGG 0.238256 1.2:+17125382 MS.gene070707:CDS
TGGCTTTCTCCTTCTTGATT+TGG 0.249778 1.2:-17127999 None:intergenic
GCACGGATCCATTGCTTATC+AGG 0.257148 1.2:-17124201 None:intergenic
CATGAAATCTGGATATTCTT+TGG 0.260088 1.2:-17127449 None:intergenic
CTATTTAAAAGTTATGAAAA+TGG 0.261211 1.2:+17122881 None:intergenic
GAAACTAGAACCTTAGAATA+TGG 0.263426 1.2:+17125749 MS.gene070707:CDS
TCCATTGGTTCAATTGTTCT+AGG 0.267079 1.2:-17126412 None:intergenic
GCTAGACTTGGACAGTCTTT+TGG 0.267504 1.2:+17125086 MS.gene070707:CDS
TGCAAAGTATCTATTGATTC+AGG 0.268018 1.2:+17123151 MS.gene070707:CDS
ATGTAATAGGAAAACTGTTT+AGG 0.287570 1.2:+17127506 MS.gene070707:CDS
AATGATGCTGCAGACATTTA+GGG 0.287937 1.2:+17125649 MS.gene070707:CDS
ATCTCCCATCCATTCCCTTA+TGG 0.297497 1.2:-17125030 None:intergenic
AACTAAGGCACATGAGGTTT+TGG 0.300915 1.2:+17125541 MS.gene070707:CDS
TTGGTCACCGACTATATCTT+TGG 0.302267 1.2:+17124653 MS.gene070707:CDS
ACTTACCATCATAGTTACTA+TGG 0.312137 1.2:+17127907 MS.gene070707:CDS
GAAAGAAATGGCTCAACATT+AGG 0.318451 1.2:-17125626 None:intergenic
TTCACTCCTTGCAGTTGTAT+TGG 0.326260 1.2:+17124231 MS.gene070707:CDS
TGTAATAGGAAAACTGTTTA+GGG 0.327771 1.2:+17127507 MS.gene070707:CDS
TGATTCAGATAACATAAAAT+TGG 0.328974 1.2:+17125373 MS.gene070707:CDS
CGATCTTTCAGCCATCTTGC+AGG 0.333220 1.2:-17124597 None:intergenic
GCTCGAATGCATCCTCATTC+TGG 0.335394 1.2:-17128019 None:intergenic
TAGAAGAATGCCGTTGGCTT+TGG 0.337561 1.2:-17122918 None:intergenic
TGCCATCCGCGTTTCAGATT+CGG 0.342405 1.2:+17125270 MS.gene070707:CDS
TCACTCCTTGCAGTTGTATT+GGG 0.345151 1.2:+17124232 MS.gene070707:CDS
TCAGCCTTCTCCATGAAATC+TGG 0.351605 1.2:-17127460 None:intergenic
TTGTTCAATATTCTAGCAAT+AGG 0.353250 1.2:+17125780 MS.gene070707:CDS
CAGTCATTCTCATGTAGTTA+AGG 0.361964 1.2:+17125808 MS.gene070707:CDS
GGAAAGATTCTCTGTATTAT+GGG 0.365847 1.2:+17122986 MS.gene070707:CDS
GGGACATCTACTTCGTTTGT+TGG 0.367482 1.2:+17126371 MS.gene070707:CDS
ATAATTGGATTTGTGATAGA+AGG 0.370562 1.2:-17127647 None:intergenic
GGAAAACTTTGTTCATTATG+AGG 0.373843 1.2:+17124311 MS.gene070707:CDS
CGACTATATCTTTGGATAAC+GGG 0.374346 1.2:+17124661 MS.gene070707:CDS
TTCTGCCCAACCTATTGTAT+TGG 0.375119 1.2:+17126441 MS.gene070707:CDS
ATATATCTATGCCATTTCTA+AGG 0.375401 1.2:-17124908 None:intergenic
ACGGCTGGGATACCGGTCTT+TGG 0.375600 1.2:-17127406 None:intergenic
ACATCCGTATTGCAAGAAAA+AGG 0.376297 1.2:-17124369 None:intergenic
TACAAATCAGATAATGTAAT+AGG 0.377558 1.2:+17127493 MS.gene070707:CDS
CTCTTTCCTTAGGGACCTTA+CGG 0.381647 1.2:-17127797 None:intergenic
ATCCAATTATGACGAAAAGT+TGG 0.383607 1.2:+17127660 MS.gene070707:CDS
ACTGTCATTGAGTATATAAT+TGG 0.384132 1.2:-17127272 None:intergenic
AACTCCTTGCCTCTTTCCTT+AGG 0.385756 1.2:-17127807 None:intergenic
TCTTGATTTGGACAAGCAAA+TGG 0.390554 1.2:-17127987 None:intergenic
TCTTCACGTATTTCTAAGAA+TGG 0.393521 1.2:+17124852 MS.gene070707:CDS
TCACTTCCGGAACACTCGTT+TGG 0.395235 1.2:-17126340 None:intergenic
ATGTTTGCTTGTACAACAAC+TGG 0.397751 1.2:+17124993 MS.gene070707:CDS
ATTCTTTCCATCCTTAGAAA+TGG 0.402135 1.2:+17124897 MS.gene070707:CDS
GTCCCCATCTAGATCACTTC+CGG 0.410214 1.2:-17126353 None:intergenic
AGAAATACGTGAAGATAAAT+CGG 0.410629 1.2:-17124844 None:intergenic
ACTCCTTGCCTCTTTCCTTA+GGG 0.412189 1.2:-17127806 None:intergenic
AAACTAGAACCTTAGAATAT+GGG 0.421804 1.2:+17125750 MS.gene070707:CDS
ATTTAGGGAATCAAAGTTGT+TGG 0.422233 1.2:+17125664 MS.gene070707:CDS
AAAAGTTATCGATATGTTGA+TGG 0.424991 1.2:-17124776 None:intergenic
TATGTCTTCTCTGATGGAAT+CGG 0.427238 1.2:+17125191 MS.gene070707:CDS
TCCATCAGAGAAGACATATT+CGG 0.427902 1.2:-17125186 None:intergenic
CAGAGATTAATGTCTCAAAT+CGG 0.428075 1.2:+17124739 MS.gene070707:CDS
ACTTTAAACAAGATGTGAAA+TGG 0.429644 1.2:-17124429 None:intergenic
CATCCATTCCCTTATGGAAT+CGG 0.429954 1.2:-17125024 None:intergenic
CAAAATTGTTCAACAAAAGA+AGG 0.430683 1.2:+17127752 MS.gene070707:CDS
CTTGTTTAAAGTTAATTCCT+TGG 0.431052 1.2:+17124440 MS.gene070707:CDS
ACCATGGAAAGCTTAGAAAA+TGG 0.431302 1.2:-17127957 None:intergenic
CCATGTTTAACCTTTGCGTC+AGG 0.431537 1.2:-17125158 None:intergenic
GGACATCTACTTCGTTTGTT+GGG 0.431717 1.2:+17126372 MS.gene070707:CDS
ACATCATGATCCAATACAAT+AGG 0.434504 1.2:-17126451 None:intergenic
GACTTACCGCCGATTCCATA+AGG 0.435845 1.2:+17125015 MS.gene070707:CDS
TGCAGCATCATTGAAAGAAA+TGG 0.437283 1.2:-17125638 None:intergenic
TCCAAAAGGAAGAGCAATGA+TGG 0.437443 1.2:+17125715 MS.gene070707:CDS
CCGACTATATCTTTGGATAA+CGG 0.440826 1.2:+17124660 MS.gene070707:CDS
AGTTGATCCACTCAGAATAA+AGG 0.443637 1.2:+17124515 MS.gene070707:CDS
GGCTCAGACATTGCTTTAGC+AGG 0.447457 1.2:-17127340 None:intergenic
GTGGGGCTGATGCAGATTCT+GGG 0.450252 1.2:+17127842 MS.gene070707:CDS
TCCACCATGTGGCGCAAAGC+TGG 0.452967 1.2:-17125902 None:intergenic
CTTGATTTGGACAAGCAAAT+GGG 0.454182 1.2:-17127986 None:intergenic
ACTAGGATATTTATTCCAAA+AGG 0.454891 1.2:+17125701 MS.gene070707:CDS
TTGGGATTGGATTGAGAAAG+TGG 0.455481 1.2:+17123033 MS.gene070707:CDS
AGTCATTCTCATGTAGTTAA+GGG 0.456086 1.2:+17125809 MS.gene070707:CDS
TCCAATTATGACGAAAAGTT+GGG 0.458287 1.2:+17127661 MS.gene070707:CDS
CTCTGTATTATGGGGAAAGA+TGG 0.458753 1.2:+17122995 MS.gene070707:CDS
GCTAAATATGCTGCTAGACT+TGG 0.459175 1.2:+17125074 MS.gene070707:CDS
GGGTATAACGGCTGGGATAC+CGG 0.459865 1.2:-17127413 None:intergenic
GGATGAAGATGCGATTACTA+TGG 0.461906 1.2:+17127774 MS.gene070707:CDS
CAAAGAATATCCAGATTTCA+TGG 0.465205 1.2:+17127450 MS.gene070707:CDS
AACATCGCCCGGGTGCAAGC+AGG 0.469267 1.2:-17125855 None:intergenic
TGTTCCGGAAGTGATCTAGA+TGG 0.469394 1.2:+17126349 MS.gene070707:CDS
TACTATGGTTTGTACAATGA+AGG 0.470404 1.2:+17127922 MS.gene070707:CDS
CTTCACGTATTTCTAAGAAT+GGG 0.472233 1.2:+17124853 MS.gene070707:CDS
GGATCTTTACTTGTTGATGT+AGG 0.473391 1.2:-17124153 None:intergenic
GGAAATCTGATGGATTACTA+TGG 0.474805 1.2:+17127682 MS.gene070707:CDS
CGAAAAGTTGGGAAATCTGA+TGG 0.476545 1.2:+17127672 MS.gene070707:CDS
CCGGAACACTCGTTTGGATG+TGG 0.476825 1.2:-17126334 None:intergenic
TTCAAAACACGAACATCGCC+CGG 0.477028 1.2:-17125866 None:intergenic
AGAAAAGTTGTACTATTCAA+AGG 0.481118 1.2:+17124560 MS.gene070707:CDS
GATCCCGACATGGAAGTTGA+TGG 0.485605 1.2:+17127601 MS.gene070707:CDS
CGATTCCATAAGGGAATGGA+TGG 0.486112 1.2:+17125025 MS.gene070707:CDS
TTCGGAAAATCTCTGTTACT+AGG 0.486188 1.2:-17124282 None:intergenic
AATCCATCAACTTCCATGTC+GGG 0.487077 1.2:-17127604 None:intergenic
ACGGGTTGGTATATGTTCGC+AGG 0.489662 1.2:+17124679 MS.gene070707:CDS
TTCATTTGTTGACGAGGAGT+TGG 0.490048 1.2:+17124806 MS.gene070707:CDS
CCACATCCAAACGAGTGTTC+CGG 0.490224 1.2:+17126334 MS.gene070707:CDS
ATGTCTTCTCTGATGGAATC+GGG 0.491936 1.2:+17125192 MS.gene070707:CDS
ATCTATGCCATTTCTAAGGA+TGG 0.492433 1.2:-17124904 None:intergenic
ATGATCCAATACAATAGGTT+GGG 0.494319 1.2:-17126446 None:intergenic
ACTGAATCAGAAATCCTTAG+TGG 0.496693 1.2:+17127712 MS.gene070707:CDS
ACCGAATATGTCTTCTCTGA+TGG 0.497328 1.2:+17125185 MS.gene070707:CDS
TTCCAGTGTGAAGGATGTAA+TGG 0.497595 1.2:-17127560 None:intergenic
TATATACTCAATGACAGTCT+TGG 0.498477 1.2:+17127277 MS.gene070707:CDS
CCCATGGTTGCTCCTCCTCA+AGG 0.503965 1.2:+17124396 MS.gene070707:CDS
TTCTCATGTAGTTAAGGGTA+TGG 0.504964 1.2:+17125814 MS.gene070707:CDS
GCAGTTGACTTTCCAAAGAC+CGG 0.509499 1.2:+17127394 MS.gene070707:CDS
CGATTTGAGACATTAATCTC+TGG 0.510436 1.2:-17124738 None:intergenic
CACGGATCCATTGCTTATCA+GGG 0.512422 1.2:-17124200 None:intergenic
CTGAAACTCTAAGCGTCAGC+AGG 0.513753 1.2:+17125117 MS.gene070707:CDS
AGAGATTAATGTCTCAAATC+GGG 0.515941 1.2:+17124740 MS.gene070707:CDS
TGGAACAAAGTTTCAGTCGC+AGG 0.517680 1.2:+17128043 MS.gene070707:CDS
CAAGGAATTTCATCAAAGGA+TGG 0.521166 1.2:+17127535 MS.gene070707:CDS
TACATCCTTCACACTGGAAG+TGG 0.522767 1.2:+17127564 MS.gene070707:CDS
TTTAATGGTGCAGGAGGTGG+AGG 0.526379 1.2:+17127240 MS.gene070707:intron
CATGATCCAATACAATAGGT+TGG 0.527023 1.2:-17126447 None:intergenic
GTTCCGGAAGTGATCTAGAT+GGG 0.528516 1.2:+17126350 MS.gene070707:CDS
CGTTTCAGATTCGGTATGGC+GGG 0.529342 1.2:+17125279 MS.gene070707:CDS
TGAAATTATTCCTGACGCAA+AGG 0.532284 1.2:+17125148 MS.gene070707:CDS
GGATCATGATGTTGAGATTG+AGG 0.532865 1.2:+17126462 MS.gene070707:CDS
ACTTACCGCCGATTCCATAA+GGG 0.536172 1.2:+17125016 MS.gene070707:CDS
CGATATGTTGATGGAAATGA+CGG 0.541344 1.2:-17124767 None:intergenic
GTTTGAACTTCTTATCGTCA+TGG 0.543349 1.2:-17123070 None:intergenic
TGCAAAGACTGTGTGTGCAT+TGG 0.543894 1.2:-17127308 None:intergenic
ACCTAGAACAATTGAACCAA+TGG 0.544402 1.2:+17126411 MS.gene070707:CDS
TGGGCAGAATCATACTCCAT+TGG 0.545458 1.2:-17126427 None:intergenic
ATTCGGTATGGCGGGTACAA+AGG 0.545736 1.2:+17125287 MS.gene070707:CDS
GCGCAAAGCTGGCACATCCA+CGG 0.545974 1.2:-17125891 None:intergenic
TATATCTTTGGATAACGGGT+TGG 0.546193 1.2:+17124665 MS.gene070707:CDS
TCCGCGTTTCAGATTCGGTA+TGG 0.546663 1.2:+17125275 MS.gene070707:CDS
GAGAATATTAGTGACTTCAC+CGG 0.548250 1.2:-17125576 None:intergenic
ACATCGCCCGGGTGCAAGCA+GGG 0.548794 1.2:-17125854 None:intergenic
CGTAAGGTCCCTAAGGAAAG+AGG 0.550881 1.2:+17127798 MS.gene070707:CDS
AGAAGGAGAAAGCCAGAATG+AGG 0.551650 1.2:+17128007 MS.gene070707:CDS
TTTAGCCACTTCCAGTGTGA+AGG 0.552840 1.2:-17127569 None:intergenic
TATACTAACAGATTCAACTA+AGG 0.553086 1.2:+17125526 MS.gene070707:CDS
CCACAAAAGTATACTTTGCA+TGG 0.555207 1.2:-17124714 None:intergenic
CCGCCGATTCCATAAGGGAA+TGG 0.555415 1.2:+17125021 MS.gene070707:CDS
TATTCTTTGGCGAAAAGATG+AGG 0.556058 1.2:-17127436 None:intergenic
TGGAATTGCGACAAAAGACT+AGG 0.562821 1.2:+17125684 MS.gene070707:CDS
CTTATCCACTCTTGATGTCA+AGG 0.563615 1.2:+17125454 MS.gene070707:CDS
GTACAATGAAGGTATGCAAA+GGG 0.564027 1.2:+17127933 MS.gene070707:CDS
AACTCAACCTTTATTCTGAG+TGG 0.564774 1.2:-17124522 None:intergenic
GGAGTTGGTTCAATGACGGT+GGG 0.565061 1.2:+17127824 MS.gene070707:CDS
TCCTTGAGGAGGAGCAACCA+TGG 0.565876 1.2:-17124397 None:intergenic
ATTGGTTCAATTGTTCTAGG+TGG 0.568502 1.2:-17126409 None:intergenic
ATTCTTTGGCGAAAAGATGA+GGG 0.569082 1.2:-17127435 None:intergenic
AAATCCATCAACTTCCATGT+CGG 0.570409 1.2:-17127605 None:intergenic
ATATCCAGATTTCATGGAGA+AGG 0.571977 1.2:+17127456 MS.gene070707:CDS
AGCTTTGCAAGCTCAATACA+TGG 0.573294 1.2:-17127361 None:intergenic
CTATGGCCGTAAGGTCCCTA+AGG 0.573363 1.2:+17127791 MS.gene070707:CDS
AAAATTGTTCAACAAAAGAA+GGG 0.575049 1.2:+17127753 MS.gene070707:CDS
AAACTGTTTAGGGAAATTCA+AGG 0.575396 1.2:+17127517 MS.gene070707:CDS
CGGGTTGGTATATGTTCGCA+GGG 0.575499 1.2:+17124680 MS.gene070707:CDS
GTTCATTATGAGGAAATCGA+GGG 0.575939 1.2:+17124321 MS.gene070707:CDS
CAATACGGATGTTGTTCCCA+TGG 0.576131 1.2:+17124380 MS.gene070707:CDS
TGTTCATTATGAGGAAATCG+AGG 0.578092 1.2:+17124320 MS.gene070707:CDS
GACAACTTCACAGACGAGGT+TGG 0.580619 1.2:-17125326 None:intergenic
ACAAACCATAGTAACTATGA+TGG 0.581319 1.2:-17127912 None:intergenic
AACTAGAACCTTAGAATATG+GGG 0.582040 1.2:+17125751 MS.gene070707:CDS
AATGAGGATGCATTCGAGCA+TGG 0.583156 1.2:+17128023 MS.gene070707:CDS
GAGATTCCCCTGATAAGCAA+TGG 0.583787 1.2:+17124193 MS.gene070707:CDS
TCAAAACACGAACATCGCCC+GGG 0.584003 1.2:-17125865 None:intergenic
TCTGTTATGAACCTGCAAGA+TGG 0.584270 1.2:+17124586 MS.gene070707:CDS
AATTCAAGGAATTTCATCAA+AGG 0.586858 1.2:+17127531 MS.gene070707:CDS
TGTGCCAGCTTTGCGCCACA+TGG 0.587567 1.2:+17125898 MS.gene070707:CDS
CCGTTATCCAAAGATATAGT+CGG 0.588330 1.2:-17124660 None:intergenic
TTTGCTTGTCCAAATCAAGA+AGG 0.588553 1.2:+17127990 MS.gene070707:CDS
AGTTGCGTGAAAACTCGCTA+TGG 0.589305 1.2:+17124970 MS.gene070707:CDS
GGTATTTGAATTCCTTGAGG+AGG 0.592430 1.2:-17124408 None:intergenic
AGAAATGGCATAGATATATG+TGG 0.594908 1.2:+17124912 MS.gene070707:CDS
TGAAGTCACTAATATTCTCA+AGG 0.594963 1.2:+17125580 MS.gene070707:CDS
CTGAATCAGAAATCCTTAGT+GGG 0.597428 1.2:+17127713 MS.gene070707:CDS
TCAGTGCAAATAATCCGCCT+TGG 0.598280 1.2:+17124634 MS.gene070707:CDS
GTTAATTCCTTGGTTCAGCA+CGG 0.599114 1.2:+17124450 MS.gene070707:CDS
TAAGGAAAGAGGCAAGGAGT+TGG 0.599194 1.2:+17127809 MS.gene070707:CDS
ACGTGTTTCATTTGTTGACG+AGG 0.601367 1.2:+17124800 MS.gene070707:CDS
CATATGCAAAAGCTTCAGCT+TGG 0.602669 1.2:+17127875 MS.gene070707:CDS
TACCGAATCTGAAACGCGGA+TGG 0.603579 1.2:-17125272 None:intergenic
CCAAAAGGAAGAGCAATGAT+GGG 0.604423 1.2:+17125716 MS.gene070707:CDS
GAAAGATTCTCTGTATTATG+GGG 0.608306 1.2:+17122987 MS.gene070707:CDS
TGTACAATGAAGGTATGCAA+AGG 0.609938 1.2:+17127932 MS.gene070707:CDS
AGATTCAACTAAGGCACATG+AGG 0.610998 1.2:+17125535 MS.gene070707:CDS
AAGACAGCCGTGCTGAACCA+AGG 0.611534 1.2:-17124457 None:intergenic
CCTTGAGGAGGAGCAACCAT+GGG 0.613313 1.2:-17124396 None:intergenic
GCCAGCTTTGCGCCACATGG+TGG 0.616294 1.2:+17125901 MS.gene070707:CDS
AATGGTATTTGAATTCCTTG+AGG 0.617830 1.2:-17124411 None:intergenic
TGGCGGGTACAAAGGAGTTG+TGG 0.620817 1.2:+17125295 MS.gene070707:CDS
GCGTTTCAGATTCGGTATGG+CGG 0.624067 1.2:+17125278 MS.gene070707:CDS
CCATTCCCTTATGGAATCGG+CGG 0.625630 1.2:-17125021 None:intergenic
ATCCATTACATCCTTCACAC+TGG 0.625885 1.2:+17127558 MS.gene070707:CDS
TCTTGAACTTGCCAAGAGAG+TGG 0.627131 1.2:+17125223 MS.gene070707:CDS
ATGCGATTACTATGGCCGTA+AGG 0.627279 1.2:+17127782 MS.gene070707:CDS
AGGAATCTTTAGACATATAG+CGG 0.630016 1.2:-17124262 None:intergenic
ACTGTCCTTGACATCAAGAG+TGG 0.630808 1.2:-17125459 None:intergenic
GCAAGGAGTTGGTTCAATGA+CGG 0.632129 1.2:+17127820 MS.gene070707:CDS
CCTGACGCAAAGGTTAAACA+TGG 0.632795 1.2:+17125158 MS.gene070707:CDS
AGGAGTTGGTTCAATGACGG+TGG 0.634265 1.2:+17127823 MS.gene070707:CDS
AGATTGAACTGCATCAACCA+TGG 0.634369 1.2:+17123120 MS.gene070707:CDS
AATCTGTAGAAGAATGCCGT+TGG 0.636903 1.2:-17122924 None:intergenic
AATTGTCGATTGAGATAACA+AGG 0.636922 1.2:-17125422 None:intergenic
AAAGATATAGTCGGTGACCA+AGG 0.637981 1.2:-17124651 None:intergenic
AGATATTGATCCAAAGCCAA+CGG 0.640968 1.2:+17122908 MS.gene070707:CDS
TCTCTGTAATAGTTCTTCAG+AGG 0.641395 1.2:-17124174 None:intergenic
TTCTTTGGCGAAAAGATGAG+GGG 0.641437 1.2:-17127434 None:intergenic
GGTCCCTAAGGAAAGAGGCA+AGG 0.643244 1.2:+17127803 MS.gene070707:CDS
AATCGAGGGTCAATACACAT+TGG 0.643950 1.2:+17124335 MS.gene070707:CDS
GGTCAATACACATTGGAGAG+AGG 0.645380 1.2:+17124342 MS.gene070707:CDS
GACTGCCCAATACAACTGCA+AGG 0.646493 1.2:-17124237 None:intergenic
AAGGAGTGAAATCTATCGCA+CGG 0.647159 1.2:-17124218 None:intergenic
CTCAAGGAGATGCTTATCTG+TGG 0.655771 1.2:+17125596 MS.gene070707:CDS
TTCCGGAAGTGATCTAGATG+GGG 0.666619 1.2:+17126351 MS.gene070707:CDS
CAGTGACAACTTCACAGACG+AGG 0.667927 1.2:-17125330 None:intergenic
ACGGATCCATTGCTTATCAG+GGG 0.669281 1.2:-17124199 None:intergenic
AGCAAATGGGAAACACACCA+TGG 0.672672 1.2:-17127973 None:intergenic
GATTCCATAAGGGAATGGAT+GGG 0.681968 1.2:+17125026 MS.gene070707:CDS
TCTTTGGCGAAAAGATGAGG+GGG 0.692139 1.2:-17127433 None:intergenic
GATATAGTCGGTGACCAAGG+CGG 0.707324 1.2:-17124648 None:intergenic
AAACAACACAATCCACCATG+TGG 0.707365 1.2:-17125913 None:intergenic
AAAGTCGTATGATCCCGACA+TGG 0.712915 1.2:+17127591 MS.gene070707:CDS
GAGTTGGTTCAATGACGGTG+GGG 0.718076 1.2:+17127825 MS.gene070707:CDS
CGTCTGTGAAGTTGTCACTG+AGG 0.737656 1.2:+17125333 MS.gene070707:CDS
GCCATACCGAATCTGAAACG+CGG 0.743631 1.2:-17125276 None:intergenic
AAGGCGGATTATTTGCACTG+AGG 0.761472 1.2:-17124632 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAATAAGATTTATCATA+TGG - chr1.2:17124081-17124100 None:intergenic 15.0%
!! ACAAATAAGATTTATCATAT+GGG - chr1.2:17124080-17124099 None:intergenic 15.0%
!! ATAAAAAAAATGACAAAAGA+GGG - chr1.2:17126271-17126290 None:intergenic 15.0%
!! TATAAAAAAAATGACAAAAG+AGG - chr1.2:17126272-17126291 None:intergenic 15.0%
!!! ATGTTTATTTTTAGAAAGTA+AGG - chr1.2:17123926-17123945 None:intergenic 15.0%
!!! TATCATCTAGAATATTATTT+TGG + chr1.2:17126203-17126222 MS.gene070707:intron 15.0%
!!! TTTTTCTTGTATTTTTTGTA+TGG + chr1.2:17126517-17126536 MS.gene070707:intron 15.0%
!! AAAATTGTTCAACAAAAGAA+GGG + chr1.2:17127753-17127772 MS.gene070707:CDS 20.0%
!! ATAACTTGATTTCTAATACA+AGG + chr1.2:17126311-17126330 MS.gene070707:intron 20.0%
!! CTTAATTAAGTATTCAAACA+AGG + chr1.2:17127200-17127219 MS.gene070707:intron 20.0%
!! TACAAATCAGATAATGTAAT+AGG + chr1.2:17127493-17127512 MS.gene070707:CDS 20.0%
!! TGATTCAGATAACATAAAAT+TGG + chr1.2:17125373-17125392 MS.gene070707:CDS 20.0%
!! TGTATTAGAAATCAAGTTAT+CGG - chr1.2:17126311-17126330 None:intergenic 20.0%
!!! ATATTATTTTGGCAAAAGAA+TGG + chr1.2:17126214-17126233 MS.gene070707:intron 20.0%
!!! ATTGATTTATGATACATCTA+TGG + chr1.2:17123528-17123547 MS.gene070707:intron 20.0%
!!! ATTTAGCCACATTTTTTATA+CGG - chr1.2:17125061-17125080 None:intergenic 20.0%
!!! CATAATTTTGTTTTCCTTTT+TGG + chr1.2:17126694-17126713 MS.gene070707:intron 20.0%
!!! TAACATAAAATTGGATGTTT+TGG + chr1.2:17125382-17125401 MS.gene070707:CDS 20.0%
!!! TGATTTTTTATGAACAATGT+TGG + chr1.2:17123417-17123436 MS.gene070707:intron 20.0%
! AAAAAGGAAAATGAAGAACA+TGG - chr1.2:17123207-17123226 None:intergenic 25.0%
! AAAAGTTATCGATATGTTGA+TGG - chr1.2:17124779-17124798 None:intergenic 25.0%
! AAACTAGAACCTTAGAATAT+GGG + chr1.2:17125750-17125769 MS.gene070707:CDS 25.0%
! AAAGTTGAAGAGATCAAAAT+TGG - chr1.2:17123991-17124010 None:intergenic 25.0%
! AATTCAAGGAATTTCATCAA+AGG + chr1.2:17127531-17127550 MS.gene070707:CDS 25.0%
! ACCATTGTTCATAATTCATA+TGG - chr1.2:17123300-17123319 None:intergenic 25.0%
! ACTAGGATATTTATTCCAAA+AGG + chr1.2:17125701-17125720 MS.gene070707:CDS 25.0%
! ACTGTCATTGAGTATATAAT+TGG - chr1.2:17127275-17127294 None:intergenic 25.0%
! ACTTTAAACAAGATGTGAAA+TGG - chr1.2:17124432-17124451 None:intergenic 25.0%
! AGAAAAGTTGTACTATTCAA+AGG + chr1.2:17124560-17124579 MS.gene070707:CDS 25.0%
! AGAAATACGTGAAGATAAAT+CGG - chr1.2:17124847-17124866 None:intergenic 25.0%
! AGCTTTCATATGAGAATATT+TGG + chr1.2:17123096-17123115 MS.gene070707:CDS 25.0%
! ATAATTGGATTTGTGATAGA+AGG - chr1.2:17127650-17127669 None:intergenic 25.0%
! ATATGAATTATGAACAATGG+TGG + chr1.2:17123299-17123318 MS.gene070707:intron 25.0%
! ATGTAATAGGAAAACTGTTT+AGG + chr1.2:17127506-17127525 MS.gene070707:CDS 25.0%
! CAAAATTGTTCAACAAAAGA+AGG + chr1.2:17127752-17127771 MS.gene070707:CDS 25.0%
! TAAAACTGTAAGTGTTTGAA+TGG - chr1.2:17126119-17126138 None:intergenic 25.0%
! TATACTAACAGATTCAACTA+AGG + chr1.2:17125526-17125545 MS.gene070707:CDS 25.0%
! TCCATATGAATTATGAACAA+TGG + chr1.2:17123296-17123315 MS.gene070707:intron 25.0%
! TGTAATAGGAAAACTGTTTA+GGG + chr1.2:17127507-17127526 MS.gene070707:CDS 25.0%
! TTGTTCAATATTCTAGCAAT+AGG + chr1.2:17125780-17125799 MS.gene070707:CDS 25.0%
!! AATACAAGAAAAAGTGCATA+TGG - chr1.2:17126510-17126529 None:intergenic 25.0%
!! ATATATCTATGCCATTTCTA+AGG - chr1.2:17124911-17124930 None:intergenic 25.0%
!! CTTGTTTAAAGTTAATTCCT+TGG + chr1.2:17124440-17124459 MS.gene070707:CDS 25.0%
!! TGTCATGATATATCTGATTT+TGG + chr1.2:17123357-17123376 MS.gene070707:intron 25.0%
!! TTTTAGCCGTATAAAAAATG+TGG + chr1.2:17125052-17125071 MS.gene070707:CDS 25.0%
!!! ATTTTGTTTTCCTTTTTGGT+AGG + chr1.2:17126698-17126717 MS.gene070707:intron 25.0%
!!! GAACAATGTTGGTTTTTTTT+TGG + chr1.2:17123428-17123447 MS.gene070707:intron 25.0%
!!! GTTTTTTTTTGGTGTAAACT+GGG + chr1.2:17123439-17123458 MS.gene070707:intron 25.0%
AAAAACTTCCCCATATTCTA+AGG - chr1.2:17125762-17125781 None:intergenic 30.0%
AAACTGTTTAGGGAAATTCA+AGG + chr1.2:17127517-17127536 MS.gene070707:CDS 30.0%
AAACTTTATTACCACTGCAT+AGG + chr1.2:17123724-17123743 MS.gene070707:intron 30.0%
AACTAGAACCTTAGAATATG+GGG + chr1.2:17125751-17125770 MS.gene070707:CDS 30.0%
AATAAGCTACAAACAGCTTA+TGG - chr1.2:17127048-17127067 None:intergenic 30.0%
AATGGTATTTGAATTCCTTG+AGG - chr1.2:17124414-17124433 None:intergenic 30.0%
ACAAACCATAGTAACTATGA+TGG - chr1.2:17127915-17127934 None:intergenic 30.0%
ACATCATGATCCAATACAAT+AGG - chr1.2:17126454-17126473 None:intergenic 30.0%
ACTTACCATCATAGTTACTA+TGG + chr1.2:17127907-17127926 MS.gene070707:CDS 30.0%
AGAAATGGCATAGATATATG+TGG + chr1.2:17124912-17124931 MS.gene070707:CDS 30.0%
AGAGATTAATGTCTCAAATC+GGG + chr1.2:17124740-17124759 MS.gene070707:CDS 30.0%
AGGAAAGATTCTCTGTATTA+TGG + chr1.2:17122985-17123004 MS.gene070707:CDS 30.0%
AGGAATCTTTAGACATATAG+CGG - chr1.2:17124265-17124284 None:intergenic 30.0%
AGTAATGTCCAATGAGAAAA+TGG - chr1.2:17126168-17126187 None:intergenic 30.0%
AGTCATTCTCATGTAGTTAA+GGG + chr1.2:17125809-17125828 MS.gene070707:CDS 30.0%
ATCCAATTATGACGAAAAGT+TGG + chr1.2:17127660-17127679 MS.gene070707:CDS 30.0%
ATCTTAATGATGATCGATGA+GGG + chr1.2:17126647-17126666 MS.gene070707:intron 30.0%
ATGATCCAATACAATAGGTT+GGG - chr1.2:17126449-17126468 None:intergenic 30.0%
ATGGCTATAGTAAGATTTGA+AGG + chr1.2:17123547-17123566 MS.gene070707:intron 30.0%
ATTCTTTCCATCCTTAGAAA+TGG + chr1.2:17124897-17124916 MS.gene070707:CDS 30.0%
ATTTAGGGAATCAAAGTTGT+TGG + chr1.2:17125664-17125683 MS.gene070707:CDS 30.0%
CAAAGAATATCCAGATTTCA+TGG + chr1.2:17127450-17127469 MS.gene070707:CDS 30.0%
CAGAGATTAATGTCTCAAAT+CGG + chr1.2:17124739-17124758 MS.gene070707:CDS 30.0%
CATATGGATGTAAAGTTCAA+AGG - chr1.2:17126494-17126513 None:intergenic 30.0%
CATGAAATCTGGATATTCTT+TGG - chr1.2:17127452-17127471 None:intergenic 30.0%
CTCTTCTGTTTGTAGTTAAT+TGG + chr1.2:17124102-17124121 MS.gene070707:intron 30.0%
GAAACTAGAACCTTAGAATA+TGG + chr1.2:17125749-17125768 MS.gene070707:CDS 30.0%
GAAAGATTCTCTGTATTATG+GGG + chr1.2:17122987-17123006 MS.gene070707:CDS 30.0%
GAAATAAAAATTGCTGCTGT+TGG - chr1.2:17123885-17123904 None:intergenic 30.0%
GGAAAACTTTGTTCATTATG+AGG + chr1.2:17124311-17124330 MS.gene070707:CDS 30.0%
GGAAAGATTCTCTGTATTAT+GGG + chr1.2:17122986-17123005 MS.gene070707:CDS 30.0%
GTATTCAAACAAGGATATGT+TGG + chr1.2:17127209-17127228 MS.gene070707:intron 30.0%
TAAAGTTTGGACAGTTATCA+CGG - chr1.2:17123712-17123731 None:intergenic 30.0%
TATATACTCAATGACAGTCT+TGG + chr1.2:17127277-17127296 MS.gene070707:CDS 30.0%
TATGCAGTGGTAATAAAGTT+TGG - chr1.2:17123725-17123744 None:intergenic 30.0%
TCCAATTATGACGAAAAGTT+GGG + chr1.2:17127661-17127680 MS.gene070707:CDS 30.0%
TGAAGTCACTAATATTCTCA+AGG + chr1.2:17125580-17125599 MS.gene070707:CDS 30.0%
TTGTGTAATGTGATCTTTCT+AGG + chr1.2:17126550-17126569 MS.gene070707:intron 30.0%
! AAGAATGGACATTTTGTCAT+TGG + chr1.2:17126229-17126248 MS.gene070707:intron 30.0%
! AATTGTCGATTGAGATAACA+AGG - chr1.2:17125425-17125444 None:intergenic 30.0%
! ACAAAGTTTTCCCTGAAATT+CGG - chr1.2:17124303-17124322 None:intergenic 30.0%
! AGCTCTTAGGTTTTTATACT+CGG + chr1.2:17123656-17123675 MS.gene070707:intron 30.0%
! AGTCAATTCCATTTTCTCAT+TGG + chr1.2:17126157-17126176 MS.gene070707:intron 30.0%
! ATCACCTTTTTCTTGCAATA+CGG + chr1.2:17124365-17124384 MS.gene070707:CDS 30.0%
! CTTCACGTATTTCTAAGAAT+GGG + chr1.2:17124853-17124872 MS.gene070707:CDS 30.0%
! GACGATGTTAAACTGTATTT+TGG + chr1.2:17122948-17122967 MS.gene070707:CDS 30.0%
! TACTATGGTTTGTACAATGA+AGG + chr1.2:17127922-17127941 MS.gene070707:CDS 30.0%
! TCTTCACGTATTTCTAAGAA+TGG + chr1.2:17124852-17124871 MS.gene070707:CDS 30.0%
! TTTTCATAATGTTCCCACTA+AGG - chr1.2:17127729-17127748 None:intergenic 30.0%
!! TGCAAAGTATCTATTGATTC+AGG + chr1.2:17123151-17123170 MS.gene070707:CDS 30.0%
!!! GGTTTTTTTTTGGTGTAAAC+TGG + chr1.2:17123438-17123457 MS.gene070707:intron 30.0%
!!! TAAGAACTTTTGAGACAATC+TGG + chr1.2:17126992-17127011 MS.gene070707:intron 30.0%
!!! TACTTTGCAGTTTTAAACCA+TGG - chr1.2:17123140-17123159 None:intergenic 30.0%
!!! TGTGTTGTTTTTCCTCAAAA+AGG + chr1.2:17125926-17125945 MS.gene070707:CDS 30.0%
AAAAACACAGGACATTGACA+TGG - chr1.2:17126904-17126923 None:intergenic 35.0%
AAATCCATCAACTTCCATGT+CGG - chr1.2:17127608-17127627 None:intergenic 35.0%
AACTCAACCTTTATTCTGAG+TGG - chr1.2:17124525-17124544 None:intergenic 35.0%
AACTGTAAGTGTTTGAATGG+AGG - chr1.2:17126116-17126135 None:intergenic 35.0%
AAGAGAGTGGCTAAAAAATG+TGG + chr1.2:17125236-17125255 MS.gene070707:CDS 35.0%
AATGATGCTGCAGACATTTA+GGG + chr1.2:17125649-17125668 MS.gene070707:CDS 35.0%
ACATCCGTATTGCAAGAAAA+AGG - chr1.2:17124372-17124391 None:intergenic 35.0%
ACATTAAGCTCAAAAACACG+AGG - chr1.2:17124132-17124151 None:intergenic 35.0%
ACCATGGAAAGCTTAGAAAA+TGG - chr1.2:17127960-17127979 None:intergenic 35.0%
ACCTAGAACAATTGAACCAA+TGG + chr1.2:17126411-17126430 MS.gene070707:CDS 35.0%
ACTGAATCAGAAATCCTTAG+TGG + chr1.2:17127712-17127731 MS.gene070707:CDS 35.0%
ACTGCTAATGTCAAAAACAC+AGG - chr1.2:17126916-17126935 None:intergenic 35.0%
AGACAATCTGGAAAAGCTTA+TGG + chr1.2:17127004-17127023 MS.gene070707:intron 35.0%
AGATATTGATCCAAAGCCAA+CGG + chr1.2:17122908-17122927 MS.gene070707:CDS 35.0%
AGTTGATCCACTCAGAATAA+AGG + chr1.2:17124515-17124534 MS.gene070707:CDS 35.0%
ATATCCAGATTTCATGGAGA+AGG + chr1.2:17127456-17127475 MS.gene070707:CDS 35.0%
ATGTTTGCTTGTACAACAAC+TGG + chr1.2:17124993-17125012 MS.gene070707:CDS 35.0%
ATTCTGTTGATCATGCACAA+TGG - chr1.2:17125981-17126000 None:intergenic 35.0%
ATTCTTTGGCGAAAAGATGA+GGG - chr1.2:17127438-17127457 None:intergenic 35.0%
CAAGGAATTTCATCAAAGGA+TGG + chr1.2:17127535-17127554 MS.gene070707:CDS 35.0%
CAGTCATTCTCATGTAGTTA+AGG + chr1.2:17125808-17125827 MS.gene070707:CDS 35.0%
CATCTTAATGATGATCGATG+AGG + chr1.2:17126646-17126665 MS.gene070707:intron 35.0%
CATGATCCAATACAATAGGT+TGG - chr1.2:17126450-17126469 None:intergenic 35.0%
CCGACTATATCTTTGGATAA+CGG + chr1.2:17124660-17124679 MS.gene070707:CDS 35.0%
CCGTTATCCAAAGATATAGT+CGG - chr1.2:17124663-17124682 None:intergenic 35.0%
CGACTATATCTTTGGATAAC+GGG + chr1.2:17124661-17124680 MS.gene070707:CDS 35.0%
CTGAATCAGAAATCCTTAGT+GGG + chr1.2:17127713-17127732 MS.gene070707:CDS 35.0%
CTTGCTCAACATGAAATCAA+AGG - chr1.2:17123602-17123621 None:intergenic 35.0%
GAAAGAAATGGCTCAACATT+AGG - chr1.2:17125629-17125648 None:intergenic 35.0%
GAGAATATTAGTGACTTCAC+CGG - chr1.2:17125579-17125598 None:intergenic 35.0%
GTCAAAGTCAATGCTTCATA+GGG + chr1.2:17126967-17126986 MS.gene070707:intron 35.0%
GTTCATTATGAGGAAATCGA+GGG + chr1.2:17124321-17124340 MS.gene070707:CDS 35.0%
GTTTGAACTTCTTATCGTCA+TGG - chr1.2:17123073-17123092 None:intergenic 35.0%
TATGTCTTCTCTGATGGAAT+CGG + chr1.2:17125191-17125210 MS.gene070707:CDS 35.0%
TATTCTTTGGCGAAAAGATG+AGG - chr1.2:17127439-17127458 None:intergenic 35.0%
TCCAACACCTTTATTGTGTT+GGG - chr1.2:17123792-17123811 None:intergenic 35.0%
TCCATCAGAGAAGACATATT+CGG - chr1.2:17125189-17125208 None:intergenic 35.0%
TCTCTGTAATAGTTCTTCAG+AGG - chr1.2:17124177-17124196 None:intergenic 35.0%
TGAAATTATTCCTGACGCAA+AGG + chr1.2:17125148-17125167 MS.gene070707:CDS 35.0%
TGCAGCATCATTGAAAGAAA+TGG - chr1.2:17125641-17125660 None:intergenic 35.0%
TGTTCATTATGAGGAAATCG+AGG + chr1.2:17124320-17124339 MS.gene070707:CDS 35.0%
TTCGGAAAATCTCTGTTACT+AGG - chr1.2:17124285-17124304 None:intergenic 35.0%
TTCTCATGTAGTTAAGGGTA+TGG + chr1.2:17125814-17125833 MS.gene070707:CDS 35.0%
TTTGCTTGTCCAAATCAAGA+AGG + chr1.2:17127990-17128009 MS.gene070707:CDS 35.0%
! ACAGAGATTTTCCGAATTTC+AGG + chr1.2:17124289-17124308 MS.gene070707:CDS 35.0%
! ACCATTTTCTAAGCTTTCCA+TGG + chr1.2:17127956-17127975 MS.gene070707:CDS 35.0%
! ATCTATGCCATTTCTAAGGA+TGG - chr1.2:17124907-17124926 None:intergenic 35.0%
! ATGGATGCTAGTGTAGATTT+TGG + chr1.2:17123014-17123033 MS.gene070707:CDS 35.0%
! ATTGGTTCAATTGTTCTAGG+TGG - chr1.2:17126412-17126431 None:intergenic 35.0%
! CAGAGATTTTCCGAATTTCA+GGG + chr1.2:17124290-17124309 MS.gene070707:CDS 35.0%
! CCACAAAAGTATACTTTGCA+TGG - chr1.2:17124717-17124736 None:intergenic 35.0%
! CCATGCAAAGTATACTTTTG+TGG + chr1.2:17124714-17124733 MS.gene070707:CDS 35.0%
! CGATATGTTGATGGAAATGA+CGG - chr1.2:17124770-17124789 None:intergenic 35.0%
! CGATTTGAGACATTAATCTC+TGG - chr1.2:17124741-17124760 None:intergenic 35.0%
! CTCAAGATAGCTATTTCACA+AGG - chr1.2:17123505-17123524 None:intergenic 35.0%
! GGATCTTTACTTGTTGATGT+AGG - chr1.2:17124156-17124175 None:intergenic 35.0%
! GTACAATGAAGGTATGCAAA+GGG + chr1.2:17127933-17127952 MS.gene070707:CDS 35.0%
! TCCCAACTTTTCGTCATAAT+TGG - chr1.2:17127665-17127684 None:intergenic 35.0%
! TGGATGCTAGTGTAGATTTT+GGG + chr1.2:17123015-17123034 MS.gene070707:CDS 35.0%
! TGTACAATGAAGGTATGCAA+AGG + chr1.2:17127932-17127951 MS.gene070707:CDS 35.0%
! TTTTTCCTCAAAAAGGTCAC+AGG + chr1.2:17125933-17125952 MS.gene070707:CDS 35.0%
!! ACAAGGATATGTTGGTAACA+CGG + chr1.2:17127217-17127236 MS.gene070707:intron 35.0%
!! ATGTTGGTAACACGGTTTAA+TGG + chr1.2:17127225-17127244 MS.gene070707:intron 35.0%
!! CATGGAAGTTGATGGATTTA+TGG + chr1.2:17127609-17127628 MS.gene070707:CDS 35.0%
!! CTTGATTTGGACAAGCAAAT+GGG - chr1.2:17127989-17128008 None:intergenic 35.0%
!! GGAAATCTGATGGATTACTA+TGG + chr1.2:17127682-17127701 MS.gene070707:CDS 35.0%
!! TATATCTTTGGATAACGGGT+TGG + chr1.2:17124665-17124684 MS.gene070707:CDS 35.0%
!! TCCATTGGTTCAATTGTTCT+AGG - chr1.2:17126415-17126434 None:intergenic 35.0%
!! TCTTGATTTGGACAAGCAAA+TGG - chr1.2:17127990-17128009 None:intergenic 35.0%
!! TTTTCCTTTTTGGTAGGAGA+TGG + chr1.2:17126704-17126723 MS.gene070707:intron 35.0%
!!! ACATTTTTTAGCCACTCTCT+TGG - chr1.2:17125237-17125256 None:intergenic 35.0%
AAACAACACAATCCACCATG+TGG - chr1.2:17125916-17125935 None:intergenic 40.0%
AAAGATATAGTCGGTGACCA+AGG - chr1.2:17124654-17124673 None:intergenic 40.0%
AAGGAGTGAAATCTATCGCA+CGG - chr1.2:17124221-17124240 None:intergenic 40.0%
AATCCATCAACTTCCATGTC+GGG - chr1.2:17127607-17127626 None:intergenic 40.0%
AATCGAGGGTCAATACACAT+TGG + chr1.2:17124335-17124354 MS.gene070707:CDS 40.0%
AATCTGTAGAAGAATGCCGT+TGG - chr1.2:17122927-17122946 None:intergenic 40.0%
ACCGAATATGTCTTCTCTGA+TGG + chr1.2:17125185-17125204 MS.gene070707:CDS 40.0%
AGATTCAACTAAGGCACATG+AGG + chr1.2:17125535-17125554 MS.gene070707:CDS 40.0%
AGATTGAACTGCATCAACCA+TGG + chr1.2:17123120-17123139 MS.gene070707:CDS 40.0%
AGCTTTGCAAGCTCAATACA+TGG - chr1.2:17127364-17127383 None:intergenic 40.0%
ATCCATTACATCCTTCACAC+TGG + chr1.2:17127558-17127577 MS.gene070707:CDS 40.0%
ATGTCTTCTCTGATGGAATC+GGG + chr1.2:17125192-17125211 MS.gene070707:CDS 40.0%
CAATGATGCTGCAGACATTT+AGG + chr1.2:17125648-17125667 MS.gene070707:CDS 40.0%
CATATGCAAAAGCTTCAGCT+TGG + chr1.2:17127875-17127894 MS.gene070707:CDS 40.0%
CATCCATTCCCTTATGGAAT+CGG - chr1.2:17125027-17125046 None:intergenic 40.0%
CCAAAAGGAAGAGCAATGAT+GGG + chr1.2:17125716-17125735 MS.gene070707:CDS 40.0%
CGAAAAGTTGGGAAATCTGA+TGG + chr1.2:17127672-17127691 MS.gene070707:CDS 40.0%
CTCCAACACCTTTATTGTGT+TGG - chr1.2:17123793-17123812 None:intergenic 40.0%
CTCTGTATTATGGGGAAAGA+TGG + chr1.2:17122995-17123014 MS.gene070707:CDS 40.0%
CTTATCCACTCTTGATGTCA+AGG + chr1.2:17125454-17125473 MS.gene070707:CDS 40.0%
GATTCCATAAGGGAATGGAT+GGG + chr1.2:17125026-17125045 MS.gene070707:CDS 40.0%
GCTAAATATGCTGCTAGACT+TGG + chr1.2:17125074-17125093 MS.gene070707:CDS 40.0%
GGACATCTACTTCGTTTGTT+GGG + chr1.2:17126372-17126391 MS.gene070707:CDS 40.0%
GGATCATGATGTTGAGATTG+AGG + chr1.2:17126462-17126481 MS.gene070707:CDS 40.0%
GGATGAAGATGCGATTACTA+TGG + chr1.2:17127774-17127793 MS.gene070707:CDS 40.0%
GGTATTTGAATTCCTTGAGG+AGG - chr1.2:17124411-17124430 None:intergenic 40.0%
GGTCAAAGTCAATGCTTCAT+AGG + chr1.2:17126966-17126985 MS.gene070707:intron 40.0%
GTTAATTCCTTGGTTCAGCA+CGG + chr1.2:17124450-17124469 MS.gene070707:CDS 40.0%
TCACTCCTTGCAGTTGTATT+GGG + chr1.2:17124232-17124251 MS.gene070707:CDS 40.0%
TCATCCATCTCCTACCAAAA+AGG - chr1.2:17126711-17126730 None:intergenic 40.0%
TCCAAAAGGAAGAGCAATGA+TGG + chr1.2:17125715-17125734 MS.gene070707:CDS 40.0%
TCTGTTATGAACCTGCAAGA+TGG + chr1.2:17124586-17124605 MS.gene070707:CDS 40.0%
TGGAAATTCTGCTTTCCTTG+TGG - chr1.2:17123865-17123884 None:intergenic 40.0%
TGGAATTGCGACAAAAGACT+AGG + chr1.2:17125684-17125703 MS.gene070707:CDS 40.0%
TGGCTTTCTCCTTCTTGATT+TGG - chr1.2:17128002-17128021 None:intergenic 40.0%
TTCACTCCTTGCAGTTGTAT+TGG + chr1.2:17124231-17124250 MS.gene070707:CDS 40.0%
TTCCAGTGTGAAGGATGTAA+TGG - chr1.2:17127563-17127582 None:intergenic 40.0%
TTCTGCCCAACCTATTGTAT+TGG + chr1.2:17126441-17126460 MS.gene070707:CDS 40.0%
TTCTTTGGCGAAAAGATGAG+GGG - chr1.2:17127437-17127456 None:intergenic 40.0%
TTGGGATTGGATTGAGAAAG+TGG + chr1.2:17123033-17123052 MS.gene070707:CDS 40.0%
! AACTAAGGCACATGAGGTTT+TGG + chr1.2:17125541-17125560 MS.gene070707:CDS 40.0%
! ACGTGTTTCATTTGTTGACG+AGG + chr1.2:17124800-17124819 MS.gene070707:CDS 40.0%
! GAAAAGATGAGGGGGTATAA+CGG - chr1.2:17127428-17127447 None:intergenic 40.0%
! TTCATTTGTTGACGAGGAGT+TGG + chr1.2:17124806-17124825 MS.gene070707:CDS 40.0%
! TTGGTCACCGACTATATCTT+TGG + chr1.2:17124653-17124672 MS.gene070707:CDS 40.0%
!! CAACACAATAAAGGTGTTGG+AGG + chr1.2:17123791-17123810 MS.gene070707:intron 40.0%
!! GTTTTGGACTTGATGTGTTC+CGG + chr1.2:17125557-17125576 MS.gene070707:CDS 40.0%
!! TTTTGGCTGTCAGATCTCAA+AGG + chr1.2:17122965-17122984 MS.gene070707:CDS 40.0%
!!! GCTAGTGTAGATTTTGGGAT+TGG + chr1.2:17123020-17123039 MS.gene070707:CDS 40.0%
AAAGTCGTATGATCCCGACA+TGG + chr1.2:17127591-17127610 MS.gene070707:CDS 45.0%
AACTCCTTGCCTCTTTCCTT+AGG - chr1.2:17127810-17127829 None:intergenic 45.0%
AATGAGGATGCATTCGAGCA+TGG + chr1.2:17128023-17128042 MS.gene070707:CDS 45.0%
ACAGTTATCACGGTACAAGC+TGG - chr1.2:17123702-17123721 None:intergenic 45.0%
ACCCAAATGCTGCAATTGGA+TGG + chr1.2:17123828-17123847 MS.gene070707:intron 45.0%
ACGGATCCATTGCTTATCAG+GGG - chr1.2:17124202-17124221 None:intergenic 45.0%
ACTCCTTGCCTCTTTCCTTA+GGG - chr1.2:17127809-17127828 None:intergenic 45.0%
ACTGTCCTTGACATCAAGAG+TGG - chr1.2:17125462-17125481 None:intergenic 45.0%
AGAAGGAGAAAGCCAGAATG+AGG + chr1.2:17128007-17128026 MS.gene070707:CDS 45.0%
AGCAAATGGGAAACACACCA+TGG - chr1.2:17127976-17127995 None:intergenic 45.0%
AGCCATCCAATTGCAGCATT+TGG - chr1.2:17123833-17123852 None:intergenic 45.0%
AGTTGCGTGAAAACTCGCTA+TGG + chr1.2:17124970-17124989 MS.gene070707:CDS 45.0%
ATCTCCCATCCATTCCCTTA+TGG - chr1.2:17125033-17125052 None:intergenic 45.0%
ATGCGATTACTATGGCCGTA+AGG + chr1.2:17127782-17127801 MS.gene070707:CDS 45.0%
CAATACGGATGTTGTTCCCA+TGG + chr1.2:17124380-17124399 MS.gene070707:CDS 45.0%
CACGGATCCATTGCTTATCA+GGG - chr1.2:17124203-17124222 None:intergenic 45.0%
CAGTGTCAACGTGTTGAGTT+CGG + chr1.2:17126932-17126951 MS.gene070707:intron 45.0%
CCATGTTTAACCTTTGCGTC+AGG - chr1.2:17125161-17125180 None:intergenic 45.0%
CCTGACGCAAAGGTTAAACA+TGG + chr1.2:17125158-17125177 MS.gene070707:CDS 45.0%
CGATTCCATAAGGGAATGGA+TGG + chr1.2:17125025-17125044 MS.gene070707:CDS 45.0%
CTCAAGGAGATGCTTATCTG+TGG + chr1.2:17125596-17125615 MS.gene070707:CDS 45.0%
CTCTTTCCTTAGGGACCTTA+CGG - chr1.2:17127800-17127819 None:intergenic 45.0%
CTTCACGCCCAACACAATAA+AGG + chr1.2:17123782-17123801 MS.gene070707:intron 45.0%
CTTTATTGTGTTGGGCGTGA+AGG - chr1.2:17123784-17123803 None:intergenic 45.0%
GAGATTCCCCTGATAAGCAA+TGG + chr1.2:17124193-17124212 MS.gene070707:CDS 45.0%
GCCATCCAATTGCAGCATTT+GGG - chr1.2:17123832-17123851 None:intergenic 45.0%
GGGACATCTACTTCGTTTGT+TGG + chr1.2:17126371-17126390 MS.gene070707:CDS 45.0%
GGTCAATACACATTGGAGAG+AGG + chr1.2:17124342-17124361 MS.gene070707:CDS 45.0%
GTAACACGGTTTAATGGTGC+AGG + chr1.2:17127231-17127250 MS.gene070707:intron 45.0%
GTTCCGGAAGTGATCTAGAT+GGG + chr1.2:17126350-17126369 MS.gene070707:CDS 45.0%
TAAGGAAAGAGGCAAGGAGT+TGG + chr1.2:17127809-17127828 MS.gene070707:CDS 45.0%
TACATCCTTCACACTGGAAG+TGG + chr1.2:17127564-17127583 MS.gene070707:CDS 45.0%
TCAGCCTTCTCCATGAAATC+TGG - chr1.2:17127463-17127482 None:intergenic 45.0%
TCAGTGCAAATAATCCGCCT+TGG + chr1.2:17124634-17124653 MS.gene070707:CDS 45.0%
TCCAATTGCAGCATTTGGGT+TGG - chr1.2:17123828-17123847 None:intergenic 45.0%
TCCTCAAAAAGGTCACAGGT+AGG + chr1.2:17125937-17125956 MS.gene070707:intron 45.0%
TCTTGAACTTGCCAAGAGAG+TGG + chr1.2:17125223-17125242 MS.gene070707:CDS 45.0%
TCTTTGGCGAAAAGATGAGG+GGG - chr1.2:17127436-17127455 None:intergenic 45.0%
TGCAAAGACTGTGTGTGCAT+TGG - chr1.2:17127311-17127330 None:intergenic 45.0%
TGGAACAAAGTTTCAGTCGC+AGG + chr1.2:17128043-17128062 MS.gene070707:CDS 45.0%
TGGGCAGAATCATACTCCAT+TGG - chr1.2:17126430-17126449 None:intergenic 45.0%
TGTTCCGGAAGTGATCTAGA+TGG + chr1.2:17126349-17126368 MS.gene070707:CDS 45.0%
TTCAAAACACGAACATCGCC+CGG - chr1.2:17125869-17125888 None:intergenic 45.0%
TTCCGGAAGTGATCTAGATG+GGG + chr1.2:17126351-17126370 MS.gene070707:CDS 45.0%
TTTAGCCACTTCCAGTGTGA+AGG - chr1.2:17127572-17127591 None:intergenic 45.0%
! ACCTACCTGTGACCTTTTTG+AGG - chr1.2:17125941-17125960 None:intergenic 45.0%
! AGCTATTTCACAAGGCTCGA+TGG - chr1.2:17123497-17123516 None:intergenic 45.0%
! CCCATCATTGCTCTTCCTTT+TGG - chr1.2:17125719-17125738 None:intergenic 45.0%
! GCAAGGAGTTGGTTCAATGA+CGG + chr1.2:17127820-17127839 MS.gene070707:CDS 45.0%
! GCAGTTGACTTTCCAAAGAC+CGG + chr1.2:17127394-17127413 MS.gene070707:CDS 45.0%
! GCCCAACACAATAAAGGTGT+TGG + chr1.2:17123788-17123807 MS.gene070707:intron 45.0%
! GCTAGACTTGGACAGTCTTT+TGG + chr1.2:17125086-17125105 MS.gene070707:CDS 45.0%
!! AAGGCGGATTATTTGCACTG+AGG - chr1.2:17124635-17124654 None:intergenic 45.0%
!! ACTTACCGCCGATTCCATAA+GGG + chr1.2:17125016-17125035 MS.gene070707:CDS 45.0%
!! TAGAAGAATGCCGTTGGCTT+TGG - chr1.2:17122921-17122940 None:intergenic 45.0%
!!! CGGTACAAGCTGGTTTTGTA+AGG - chr1.2:17123692-17123711 None:intergenic 45.0%
!!! TGTTCGTGTTTTGAAAGCCG+TGG + chr1.2:17125874-17125893 MS.gene070707:CDS 45.0%
!!! AACAAAATTTAAAATAAAAA+AGG - chr1.2:17123223-17123242 None:intergenic 5.0%
AAAAATCCCTGCTTGCACCC+GGG + chr1.2:17125848-17125867 MS.gene070707:CDS 50.0%
ACACGGTTTAATGGTGCAGG+AGG + chr1.2:17127234-17127253 MS.gene070707:intron 50.0%
ACCTAAGAGCTGCACTCTTG+TGG - chr1.2:17123647-17123666 None:intergenic 50.0%
ACTGCATAGGCCATATCTCC+AGG + chr1.2:17123737-17123756 MS.gene070707:intron 50.0%
CAGTGACAACTTCACAGACG+AGG - chr1.2:17125333-17125352 None:intergenic 50.0%
CCACATCCAAACGAGTGTTC+CGG + chr1.2:17126334-17126353 MS.gene070707:CDS 50.0%
CCATTCCCTTATGGAATCGG+CGG - chr1.2:17125024-17125043 None:intergenic 50.0%
CGATCTTTCAGCCATCTTGC+AGG - chr1.2:17124600-17124619 None:intergenic 50.0%
CGTAAGGTCCCTAAGGAAAG+AGG + chr1.2:17127798-17127817 MS.gene070707:CDS 50.0%
CGTCTGTGAAGTTGTCACTG+AGG + chr1.2:17125333-17125352 MS.gene070707:CDS 50.0%
CTGAAACTCTAAGCGTCAGC+AGG + chr1.2:17125117-17125136 MS.gene070707:CDS 50.0%
GAAAAATCCCTGCTTGCACC+CGG + chr1.2:17125847-17125866 MS.gene070707:CDS 50.0%
GACAACTTCACAGACGAGGT+TGG - chr1.2:17125329-17125348 None:intergenic 50.0%
GACTGCCCAATACAACTGCA+AGG - chr1.2:17124240-17124259 None:intergenic 50.0%
GATATAGTCGGTGACCAAGG+CGG - chr1.2:17124651-17124670 None:intergenic 50.0%
GATCCCGACATGGAAGTTGA+TGG + chr1.2:17127601-17127620 MS.gene070707:CDS 50.0%
GCACGGATCCATTGCTTATC+AGG - chr1.2:17124204-17124223 None:intergenic 50.0%
GCCAACCCAAATGCTGCAAT+TGG + chr1.2:17123824-17123843 MS.gene070707:intron 50.0%
GCCATATCTCCAGGCAATGT+GGG + chr1.2:17123746-17123765 MS.gene070707:intron 50.0%
GCTCGAATGCATCCTCATTC+TGG - chr1.2:17128022-17128041 None:intergenic 50.0%
GGATTTAGTCCCACATTGCC+TGG - chr1.2:17123758-17123777 None:intergenic 50.0%
GGCTCAGACATTGCTTTAGC+AGG - chr1.2:17127343-17127362 None:intergenic 50.0%
GTCCCCATCTAGATCACTTC+CGG - chr1.2:17126356-17126375 None:intergenic 50.0%
TCAAAACACGAACATCGCCC+GGG - chr1.2:17125868-17125887 None:intergenic 50.0%
TCACTTCCGGAACACTCGTT+TGG - chr1.2:17126343-17126362 None:intergenic 50.0%
TCCCACATTGCCTGGAGATA+TGG - chr1.2:17123750-17123769 None:intergenic 50.0%
TGCAATTGGATGGCTAGAGG+CGG + chr1.2:17123838-17123857 MS.gene070707:intron 50.0%
TGCCATCCGCGTTTCAGATT+CGG + chr1.2:17125270-17125289 MS.gene070707:CDS 50.0%
TGCTGCAATTGGATGGCTAG+AGG + chr1.2:17123835-17123854 MS.gene070707:intron 50.0%
TGGAGATATGGCCTATGCAG+TGG - chr1.2:17123738-17123757 None:intergenic 50.0%
TTTAATGGTGCAGGAGGTGG+AGG + chr1.2:17127240-17127259 MS.gene070707:intron 50.0%
! AGGAGTTGGTTCAATGACGG+TGG + chr1.2:17127823-17127842 MS.gene070707:CDS 50.0%
! CGTTTCAGATTCGGTATGGC+GGG + chr1.2:17125279-17125298 MS.gene070707:CDS 50.0%
! GAGTTGGTTCAATGACGGTG+GGG + chr1.2:17127825-17127844 MS.gene070707:CDS 50.0%
! GCCATACCGAATCTGAAACG+CGG - chr1.2:17125279-17125298 None:intergenic 50.0%
! GCGTTTCAGATTCGGTATGG+CGG + chr1.2:17125278-17125297 MS.gene070707:CDS 50.0%
! GGAGTTGGTTCAATGACGGT+GGG + chr1.2:17127824-17127843 MS.gene070707:CDS 50.0%
! TACCGAATCTGAAACGCGGA+TGG - chr1.2:17125275-17125294 None:intergenic 50.0%
! TCCACAAGAGTGCAGCTCTT+AGG + chr1.2:17123643-17123662 MS.gene070707:intron 50.0%
! TCCGCGTTTCAGATTCGGTA+TGG + chr1.2:17125275-17125294 MS.gene070707:CDS 50.0%
!! ACGGGTTGGTATATGTTCGC+AGG + chr1.2:17124679-17124698 MS.gene070707:CDS 50.0%
!! ATTCGGTATGGCGGGTACAA+AGG + chr1.2:17125287-17125306 MS.gene070707:CDS 50.0%
!! CGGGTTGGTATATGTTCGCA+GGG + chr1.2:17124680-17124699 MS.gene070707:CDS 50.0%
!! GACTTACCGCCGATTCCATA+AGG + chr1.2:17125015-17125034 MS.gene070707:CDS 50.0%
!! TTGAGTTCGGTGTCTGTGTC+TGG + chr1.2:17126945-17126964 MS.gene070707:intron 50.0%
AAGACAGCCGTGCTGAACCA+AGG - chr1.2:17124460-17124479 None:intergenic 55.0%
CCGGAACACTCGTTTGGATG+TGG - chr1.2:17126337-17126356 None:intergenic 55.0%
CCTTGAGGAGGAGCAACCAT+GGG - chr1.2:17124399-17124418 None:intergenic 55.0%
CGGTTTAATGGTGCAGGAGG+TGG + chr1.2:17127237-17127256 MS.gene070707:intron 55.0%
CTATGGCCGTAAGGTCCCTA+AGG + chr1.2:17127791-17127810 MS.gene070707:CDS 55.0%
GGCCATATCTCCAGGCAATG+TGG + chr1.2:17123745-17123764 MS.gene070707:intron 55.0%
GGGTATAACGGCTGGGATAC+CGG - chr1.2:17127416-17127435 None:intergenic 55.0%
GGTCCCTAAGGAAAGAGGCA+AGG + chr1.2:17127803-17127822 MS.gene070707:CDS 55.0%
GTGGGGCTGATGCAGATTCT+GGG + chr1.2:17127842-17127861 MS.gene070707:CDS 55.0%
GTTCAGCACGGCTGTCTTTC+AGG + chr1.2:17124462-17124481 MS.gene070707:CDS 55.0%
TCCTTGAGGAGGAGCAACCA+TGG - chr1.2:17124400-17124419 None:intergenic 55.0%
TTGTGTTGGGCGTGAAGGAG+TGG - chr1.2:17123779-17123798 None:intergenic 55.0%
! AGATGAGGGGGTATAACGGC+TGG - chr1.2:17127424-17127443 None:intergenic 55.0%
! GATGAGGGGGTATAACGGCT+GGG - chr1.2:17127423-17127442 None:intergenic 55.0%
! TGGCGGGTACAAAGGAGTTG+TGG + chr1.2:17125295-17125314 MS.gene070707:CDS 55.0%
!! CCGCCGATTCCATAAGGGAA+TGG + chr1.2:17125021-17125040 MS.gene070707:CDS 55.0%
ACGGCTGGGATACCGGTCTT+TGG - chr1.2:17127409-17127428 None:intergenic 60.0%
ATCCTTCACGTGCGCGGTTG+CGG + chr1.2:17123463-17123482 MS.gene070707:intron 60.0%
ATGGCTAGAGGCGGACCACA+AGG + chr1.2:17123847-17123866 MS.gene070707:intron 60.0%
CCCATGGTTGCTCCTCCTCA+AGG + chr1.2:17124396-17124415 MS.gene070707:CDS 60.0%
CTGGGTATCCTTCACGTGCG+CGG + chr1.2:17123457-17123476 MS.gene070707:intron 60.0%
GCGCAAAGCTGGCACATCCA+CGG - chr1.2:17125894-17125913 None:intergenic 60.0%
GGTGGGGCTGATGCAGATTC+TGG + chr1.2:17127841-17127860 MS.gene070707:CDS 60.0%
TCCACCATGTGGCGCAAAGC+TGG - chr1.2:17125905-17125924 None:intergenic 60.0%
TGTGCCAGCTTTGCGCCACA+TGG + chr1.2:17125898-17125917 MS.gene070707:CDS 60.0%
AACATCGCCCGGGTGCAAGC+AGG - chr1.2:17125858-17125877 None:intergenic 65.0%
ACATCGCCCGGGTGCAAGCA+GGG - chr1.2:17125857-17125876 None:intergenic 65.0%
GCCAGCTTTGCGCCACATGG+TGG + chr1.2:17125901-17125920 MS.gene070707:CDS 65.0%
CTCCGCAACCGCGCACGTGA+AGG - chr1.2:17123468-17123487 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 17122894 17128080 17122894 ID=MS.gene070707
chr1.2 mRNA 17122894 17128080 17122894 ID=MS.gene070707.t1;Parent=MS.gene070707
chr1.2 exon 17122894 17123172 17122894 ID=MS.gene070707.t1.exon1;Parent=MS.gene070707.t1
chr1.2 CDS 17122894 17123172 17122894 ID=cds.MS.gene070707.t1;Parent=MS.gene070707.t1
chr1.2 exon 17124117 17125954 17124117 ID=MS.gene070707.t1.exon2;Parent=MS.gene070707.t1
chr1.2 CDS 17124117 17125954 17124117 ID=cds.MS.gene070707.t1;Parent=MS.gene070707.t1
chr1.2 exon 17126333 17126483 17126333 ID=MS.gene070707.t1.exon3;Parent=MS.gene070707.t1
chr1.2 CDS 17126333 17126483 17126333 ID=cds.MS.gene070707.t1;Parent=MS.gene070707.t1
chr1.2 exon 17127253 17128080 17127253 ID=MS.gene070707.t1.exon4;Parent=MS.gene070707.t1
chr1.2 CDS 17127253 17128080 17127253 ID=cds.MS.gene070707.t1;Parent=MS.gene070707.t1
Gene Sequence

>MS.gene070707

ATGAAAATGGAAAGAGATATTGATCCAAAGCCAACGGCATTCTTCTACAGATTAGACGATGTTAAACTGTATTTTGGCTGTCAGATCTCAAAGGAAAGATTCTCTGTATTATGGGGAAAGATGGATGCTAGTGTAGATTTTGGGATTGGATTGAGAAAGTGGCGATTCTCTATGTGCCATGACGATAAGAAGTTCAAACTTGAGCTTTCATATGAGAATATTTGGAAGATTGAACTGCATCAACCATGGTTTAAAACTGCAAAGTATCTATTGATTCAGGTTGTTAAATTCAACTTTTCATTATTTTAAACCATGTTCTTCATTTTCCTTTTTTATTTTAAATTTTGTTTTTCATGTAATGCTTCTTTTTTGCATTTAATGCATGCTATGTTTTATTTTTGCTCCATATGAATTATGAACAATGGTGGATGTTTTCATAATAAATATATATTTTTTCTAAGATTGTCATGATATATCTGATTTTGGATTACTTTTGAGTAGTTTTATCTTTGTGAAATAGTGTTGATTTTTTATGAACAATGTTGGTTTTTTTTTGGTGTAAACTGGGTATCCTTCACGTGCGCGGTTGCGGAGACTAATCCATCGAGCCTTGTGAAATAGCTATCTTGAGAAGATTGATTTATGATACATCTATGGCTATAGTAAGATTTGAAGGAATGTGTTCTTTTTTTTTTTTTTTTGTTTCCTTTGATTTCATGTTGAGCAAGTTTTCTTTCAATATCATTTCTTCCACAAGAGTGCAGCTCTTAGGTTTTTATACTCGGCTTAACTCATCCTTACAAAACCAGCTTGTACCGTGATAACTGTCCAAACTTTATTACCACTGCATAGGCCATATCTCCAGGCAATGTGGGACTAAATCCACTCCTTCACGCCCAACACAATAAAGGTGTTGGAGGCTGCAATGAAGCCAACCCAAATGCTGCAATTGGATGGCTAGAGGCGGACCACAAGGAAAGCAGAATTTCCAACAGCAGCAATTTTTATTTCTTTTTGTGCTAGATGACACCTTACTTTCTAAAAATAAACATTTTTATGCAATTTAATGTTTGCTAAATTATGTATTAATTAAGCCAATTTTGATCTCTTCAACTTTGAACTCTTATCGTTATTCGAAATTTTTTTACTCTGTAATTGTATAGAGCTAAAATTTTATGCACATCCCATATGATAAATCTTATTTGTTTCTCTTCTGTTTGTAGTTAATTGGTGCTCCTCGTGTTTTTGAGCTTAATGTTCCTACATCAACAAGTAAAGATCCTCTGAAGAACTATTACAGAGATTCCCCTGATAAGCAATGGATCCGTGCGATAGATTTCACTCCTTGCAGTTGTATTGGGCAGTCTTCCGCTATATGTCTAAAGATTCCTAGTAACAGAGATTTTCCGAATTTCAGGGAAAACTTTGTTCATTATGAGGAAATCGAGGGTCAATACACATTGGAGAGAGGATCACCTTTTTCTTGCAATACGGATGTTGTTCCCATGGTTGCTCCTCCTCAAGGAATTCAAATACCATTTCACATCTTGTTTAAAGTTAATTCCTTGGTTCAGCACGGCTGTCTTTCAGGTTCTGAACTTGATAATGCTTTCTATCGTCTAGTTGATCCACTCAGAATAAAGGTTGAGTTTATCGAGCATGCTTTAGAAAAGTTGTACTATTCAAAGGATTTCTGTTATGAACCTGCAAGATGGCTGAAAGATCGCTACAGAATGTACCTCAGTGCAAATAATCCGCCTTGGTCACCGACTATATCTTTGGATAACGGGTTGGTATATGTTCGCAGGGTTCAGATAACACCATGCAAAGTATACTTTTGTGGTCCAGAGATTAATGTCTCAAATCGGGTTCTCCGTCATTTCCATCAACATATCGATAACTTTTTACGTGTTTCATTTGTTGACGAGGAGTTGGATAATATGTATTCAGCCGATTTATCTTCACGTATTTCTAAGAATGGGAGAACTGAGATATACTATAGAATTCTTTCCATCCTTAGAAATGGCATAGATATATGTGGTATGAAGTTTGAATTTCTAGCTTTCTCATCAAGTCAGTTGCGTGAAAACTCGCTATGGATGTTTGCTTGTACAACAACTGGACTTACCGCCGATTCCATAAGGGAATGGATGGGAGATTTTAGCCGTATAAAAAATGTGGCTAAATATGCTGCTAGACTTGGACAGTCTTTTGGTTCGTCTACTGAAACTCTAAGCGTCAGCAGGAAGAAAATTGAAATTATTCCTGACGCAAAGGTTAAACATGGTGCAACCGAATATGTCTTCTCTGATGGAATCGGGAAAATATCTCTTGAACTTGCCAAGAGAGTGGCTAAAAAATGTGGTCATGATTCAATGCCATCCGCGTTTCAGATTCGGTATGGCGGGTACAAAGGAGTTGTGGCTGTTGATCCAACCTCGTCTGTGAAGTTGTCACTGAGGAAGAGTATGCACAAGTATGATTCAGATAACATAAAATTGGATGTTTTGGCATGCAGTAAGTTTCAGCCTTGTTATCTCAATCGACAATTGATTACTCTCTTATCCACTCTTGATGTCAAGGACAGTGTTTTTGAGAAAAAACAAAAAGAAGCTGTTACTCAACTGAACACTATACTAACAGATTCAACTAAGGCACATGAGGTTTTGGACTTGATGTGTTCCGGTGAAGTCACTAATATTCTCAAGGAGATGCTTATCTGTGGCTACAAGCCTAATGTTGAGCCATTTCTTTCAATGATGCTGCAGACATTTAGGGAATCAAAGTTGTTGGAATTGCGACAAAAGACTAGGATATTTATTCCAAAAGGAAGAGCAATGATGGGAGTTCTCGATGAAACTAGAACCTTAGAATATGGGGAAGTTTTTGTTCAATATTCTAGCAATAGGTTCAGCAGTCATTCTCATGTAGTTAAGGGTATGGTAGTAGTAGCGAAAAATCCCTGCTTGCACCCGGGCGATGTTCGTGTTTTGAAAGCCGTGGATGTGCCAGCTTTGCGCCACATGGTGGATTGTGTTGTTTTTCCTCAAAAAGGTCACAGGTAGGTATTCTTAAATATCTCAACCATTGTGCATGATCAACAGAATGCTATCTTAAATATCTCTAATATTTAAGTGATTGAACTTGTGAAAAGTGACTCGAGAGCTTAATACTACATTTATTTAGTAAATATTCGCTGATACTTGTTACAAAACAATGCCTCCATTCAAACACTTACAGTTTTATGCATTTTTTTCTTCATTAGTCAATTCCATTTTCTCATTGGACATTACTGTTTTACTATAGATTTATCATCTAGAATATTATTTTGGCAAAAGAATGGACATTTTGTCATTGGACATTACTTAAAGTTTCCCTCTTTTGTCATTTTTTTTATAAAACTGTCTATTGACACCGATAACTTGATTTCTAATACAAGGCCACATCCAAACGAGTGTTCCGGAAGTGATCTAGATGGGGACATCTACTTCGTTTGTTGGGATTCTGAATTGATTCCACCTAGAACAATTGAACCAATGGAGTATGATTCTGCCCAACCTATTGTATTGGATCATGATGTTGAGATTGAGGTATTGTCCTTTGAACTTTACATCCATATGCACTTTTTCTTGTATTTTTTGTATGGTTTTAGCAATTTGTGTAATGTGATCTTTCTAGGTTATTTGACATTCTTTTCTGTTTTTATCAGTAAAGTATTCACAACTTGTGCACATCTTTTCACATACACACATCATCTTAATGATGATCGATGAGGGCGTTAACGATATTAAATTTGATTACATAATTTTGTTTTCCTTTTTGGTAGGAGATGGATGAATGAAAGTGAAAGACTTGACATATCTTGTTTTAGAATTTATTTTTTTAAACTAAACAAATTGTTCAATTTAGATGCTTTCGCTCTTAATTTATATATTTTATGACTAATGTTGCTGTAAAAAACACTTATGTTCATATTTTATTTAATCGTGATAAATACATATATGTAACCATGTCAATGTCCTGTGTTTTTGACATTAGCAGTGTCAACGTGTTGAGTTCGGTGTCTGTGTCTGGTCAAAGTCAATGCTTCATAGGGCATAAGAACTTTTGAGACAATCTGGAAAAGCTTATGGAAACAGCTTATGACATGTCCATAAGCTGTTTGTAGCTTATTTTCATAAGCTCTCTAGAATAGCTTATGAAAACAGCTTATATGAATTATGAGAACAATTTTGTTTTATTTTATCTTGTCACAAAAATAGCTTACACATGAGAACTTACATGATAAGTGTTTATACTAAAAGCGCTTAATTAAGTATTCAAACAAGGATATGTTGGTAACACGGTTTAATGGTGCAGGAGGTGGAGGAGTATTTCACCAATTATATACTCAATGACAGTCTTGGAATAATTTCCAATGCACACACAGTCTTTGCAGATAAAGAACCTGCTAAAGCAATGTCTGAGCCATGTATTGAGCTTGCAAAGCTATTCTCAATTGCAGTTGACTTTCCAAAGACCGGTATCCCAGCCGTTATACCCCCTCATCTTTTCGCCAAAGAATATCCAGATTTCATGGAGAAGGCTGACAAAACAACATACAAATCAGATAATGTAATAGGAAAACTGTTTAGGGAAATTCAAGGAATTTCATCAAAGGATGGATCCATTACATCCTTCACACTGGAAGTGGCTAAAAAGTCGTATGATCCCGACATGGAAGTTGATGGATTTATGGATTATGTCGATGATGCCTTCTATCACAAATCCAATTATGACGAAAAGTTGGGAAATCTGATGGATTACTATGGTATCAAAACTGAATCAGAAATCCTTAGTGGGAACATTATGAAAATGTCAAAATTGTTCAACAAAAGAAGGGATGAAGATGCGATTACTATGGCCGTAAGGTCCCTAAGGAAAGAGGCAAGGAGTTGGTTCAATGACGGTGGGGCTGATGCAGATTCTGGGAGTGATGATGCATATGCAAAAGCTTCAGCTTGGTATTTTGTTACTTACCATCATAGTTACTATGGTTTGTACAATGAAGGTATGCAAAGGGACCATTTTCTAAGCTTTCCATGGTGTGTTTCCCATTTGCTTGTCCAAATCAAGAAGGAGAAAGCCAGAATGAGGATGCATTCGAGCATGGAACAAAGTTTCAGTCGCAGGTTGCGTCTTGACTGA
Protein sequence

>MS.gene070707.t1

MKMERDIDPKPTAFFYRLDDVKLYFGCQISKERFSVLWGKMDASVDFGIGLRKWRFSMCHDDKKFKLELSYENIWKIELHQPWFKTAKYLLIQLIGAPRVFELNVPTSTSKDPLKNYYRDSPDKQWIRAIDFTPCSCIGQSSAICLKIPSNRDFPNFRENFVHYEEIEGQYTLERGSPFSCNTDVVPMVAPPQGIQIPFHILFKVNSLVQHGCLSGSELDNAFYRLVDPLRIKVEFIEHALEKLYYSKDFCYEPARWLKDRYRMYLSANNPPWSPTISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHQHIDNFLRVSFVDEELDNMYSADLSSRISKNGRTEIYYRILSILRNGIDICGMKFEFLAFSSSQLRENSLWMFACTTTGLTADSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSVSRKKIEIIPDAKVKHGATEYVFSDGIGKISLELAKRVAKKCGHDSMPSAFQIRYGGYKGVVAVDPTSSVKLSLRKSMHKYDSDNIKLDVLACSKFQPCYLNRQLITLLSTLDVKDSVFEKKQKEAVTQLNTILTDSTKAHEVLDLMCSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRESKLLELRQKTRIFIPKGRAMMGVLDETRTLEYGEVFVQYSSNRFSSHSHVVKGMVVVAKNPCLHPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPPRTIEPMEYDSAQPIVLDHDVEIEEVEEYFTNYILNDSLGIISNAHTVFADKEPAKAMSEPCIELAKLFSIAVDFPKTGIPAVIPPHLFAKEYPDFMEKADKTTYKSDNVIGKLFREIQGISSKDGSITSFTLEVAKKSYDPDMEVDGFMDYVDDAFYHKSNYDEKLGNLMDYYGIKTESEILSGNIMKMSKLFNKRRDEDAITMAVRSLRKEARSWFNDGGADADSGSDDAYAKASAWYFVTYHHSYYGLYNEGMQRDHFLSFPWCVSHLLVQIKKEKARMRMHSSMEQSFSRRLRLD