Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058208.t1 | AES65041.2 | 96.4 | 607 | 22 | 0 | 1 | 607 | 287 | 893 | 1.5e-308 | 1068.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058208.t1 | O23463 | 61.3 | 600 | 225 | 4 | 10 | 607 | 312 | 906 | 1.6e-178 | 627.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058208.t1 | G7IMU6 | 96.4 | 607 | 22 | 0 | 1 | 607 | 287 | 893 | 1.0e-308 | 1068.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene054183 | MS.gene058208 | 0.821228 | 4.51E-53 | -1.69E-46 |
MS.gene058208 | MS.gene058209 | 0.980801 | 4.59E-151 | -1.69E-46 |
MS.gene058208 | MS.gene058935 | 0.814377 | 1.59E-51 | -1.69E-46 |
MS.gene058208 | MS.gene070707 | 0.81037 | 1.19E-50 | -1.69E-46 |
MS.gene058208 | MS.gene07986 | 0.805662 | 1.20E-49 | -1.69E-46 |
MS.gene058208 | MS.gene08003 | 0.814195 | 1.74E-51 | -1.69E-46 |
MS.gene058208 | MS.gene08004 | 0.853697 | 2.01E-61 | -1.69E-46 |
MS.gene058208 | MS.gene08006 | 0.814468 | 1.52E-51 | -1.69E-46 |
MS.gene058208 | MS.gene08007 | 0.806877 | 6.64E-50 | -1.69E-46 |
MS.gene058208 | MS.gene08014 | 0.823654 | 1.23E-53 | -1.69E-46 |
MS.gene058208 | MS.gene08019 | 0.83003 | 3.69E-55 | -1.69E-46 |
MS.gene058208 | MS.gene22040 | 0.819945 | 8.90E-53 | -1.69E-46 |
MS.gene058208 | MS.gene42611 | 0.805347 | 1.39E-49 | -1.69E-46 |
MS.gene058208 | MS.gene42613 | 0.807151 | 5.81E-50 | -1.69E-46 |
MS.gene058208 | MS.gene43915 | 0.828006 | 1.14E-54 | -1.69E-46 |
MS.gene058208 | MS.gene48336 | 0.838368 | 3.00E-57 | -1.69E-46 |
MS.gene058208 | MS.gene51389 | 0.805465 | 1.32E-49 | -1.69E-46 |
MS.gene058208 | MS.gene51420 | 0.982671 | 1.07E-155 | -1.69E-46 |
MS.gene058208 | MS.gene52745 | 0.801338 | 9.44E-49 | -1.69E-46 |
MS.gene058208 | MS.gene52870 | 0.810853 | 9.38E-51 | -1.69E-46 |
MS.gene058208 | MS.gene52885 | 0.804464 | 2.13E-49 | -1.69E-46 |
MS.gene058208 | MS.gene52889 | 0.807544 | 4.80E-50 | -1.69E-46 |
MS.gene058208 | MS.gene57637 | 0.807128 | 5.88E-50 | -1.69E-46 |
MS.gene058208 | MS.gene61653 | 0.806023 | 1.01E-49 | -1.69E-46 |
MS.gene058208 | MS.gene68339 | 0.836164 | 1.10E-56 | -1.69E-46 |
MS.gene058208 | MS.gene69301 | 0.806224 | 9.13E-50 | -1.69E-46 |
MS.gene058208 | MS.gene70077 | 0.802127 | 6.50E-49 | -1.69E-46 |
MS.gene058208 | MS.gene78329 | 0.803389 | 3.57E-49 | -1.69E-46 |
MS.gene058208 | MS.gene80069 | 0.802677 | 5.01E-49 | -1.69E-46 |
MS.gene058208 | MS.gene80082 | 0.812914 | 3.34E-51 | -1.69E-46 |
MS.gene058208 | MS.gene80190 | 0.803816 | 2.91E-49 | -1.69E-46 |
MS.gene058208 | MS.gene81554 | 0.822328 | 2.51E-53 | -1.69E-46 |
MS.gene058208 | MS.gene82521 | 0.822845 | 1.91E-53 | -1.69E-46 |
MS.gene058208 | MS.gene85785 | 0.81649 | 5.38E-52 | -1.69E-46 |
MS.gene058208 | MS.gene85788 | 0.803293 | 3.74E-49 | -1.69E-46 |
MS.gene058208 | MS.gene85796 | 0.813991 | 1.93E-51 | -1.69E-46 |
MS.gene058208 | MS.gene87570 | 0.825757 | 3.94E-54 | -1.69E-46 |
MS.gene058208 | MS.gene91428 | 0.808451 | 3.08E-50 | -1.69E-46 |
MS.gene058208 | MS.gene91657 | 0.817726 | 2.84E-52 | -1.69E-46 |
MS.gene058208 | MS.gene93781 | 0.809711 | 1.65E-50 | -1.69E-46 |
MS.gene058208 | MS.gene93869 | 0.819227 | 1.30E-52 | -1.69E-46 |
MS.gene058208 | MS.gene95891 | 0.809287 | 2.04E-50 | -1.69E-46 |
MS.gene058208 | MS.gene96111 | 0.833493 | 5.17E-56 | -1.69E-46 |
MS.gene058208 | MS.gene97211 | 0.832853 | 7.46E-56 | -1.69E-46 |
MS.gene058208 | MS.gene99638 | 0.822676 | 2.09E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058208.t1 | MTR_2g034650 | 96.376 | 607 | 22 | 0 | 1 | 607 | 287 | 893 | 0.0 | 1228 |
MS.gene058208.t1 | MTR_4g121840 | 73.134 | 603 | 161 | 1 | 5 | 607 | 304 | 905 | 0.0 | 915 |
MS.gene058208.t1 | MTR_4g121840 | 73.134 | 603 | 161 | 1 | 5 | 607 | 274 | 875 | 0.0 | 913 |
MS.gene058208.t1 | MTR_8g080800 | 37.077 | 561 | 306 | 16 | 69 | 607 | 399 | 934 | 5.61e-90 | 299 |
MS.gene058208.t1 | MTR_8g090205 | 32.097 | 620 | 376 | 14 | 11 | 599 | 275 | 880 | 8.66e-90 | 297 |
MS.gene058208.t1 | MTR_8g090205 | 32.097 | 620 | 376 | 14 | 11 | 599 | 275 | 880 | 1.31e-89 | 297 |
MS.gene058208.t1 | MTR_8g090205 | 32.097 | 620 | 376 | 14 | 11 | 599 | 432 | 1037 | 1.17e-88 | 297 |
MS.gene058208.t1 | MTR_8g090205 | 32.097 | 620 | 376 | 14 | 11 | 599 | 434 | 1039 | 1.18e-88 | 297 |
MS.gene058208.t1 | MTR_8g090205 | 32.097 | 620 | 376 | 14 | 11 | 599 | 434 | 1039 | 1.43e-88 | 297 |
MS.gene058208.t1 | MTR_8g090205 | 32.097 | 620 | 376 | 14 | 11 | 599 | 432 | 1037 | 1.46e-88 | 297 |
MS.gene058208.t1 | MTR_2g008840 | 32.143 | 616 | 371 | 13 | 14 | 599 | 355 | 953 | 7.61e-85 | 285 |
MS.gene058208.t1 | MTR_2g008840 | 31.981 | 616 | 372 | 13 | 14 | 599 | 395 | 993 | 2.07e-84 | 285 |
MS.gene058208.t1 | MTR_4g094215 | 32.500 | 560 | 335 | 12 | 69 | 599 | 436 | 981 | 9.17e-82 | 278 |
MS.gene058208.t1 | MTR_4g094215 | 32.500 | 560 | 335 | 12 | 69 | 599 | 436 | 981 | 1.00e-81 | 277 |
MS.gene058208.t1 | MTR_3g085050 | 33.922 | 566 | 323 | 16 | 53 | 599 | 375 | 908 | 1.49e-73 | 253 |
MS.gene058208.t1 | MTR_3g085050 | 33.922 | 566 | 323 | 16 | 53 | 599 | 375 | 908 | 2.84e-73 | 253 |
MS.gene058208.t1 | MTR_8g090205 | 30.268 | 522 | 322 | 13 | 11 | 504 | 434 | 941 | 8.23e-60 | 215 |
MS.gene058208.t1 | MTR_2g008840 | 30.174 | 517 | 320 | 11 | 14 | 504 | 395 | 896 | 1.48e-55 | 202 |
MS.gene058208.t1 | MTR_4g094215 | 30.435 | 460 | 284 | 10 | 69 | 504 | 436 | 883 | 8.01e-53 | 195 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058208.t1 | AT3G16940 | 58.140 | 602 | 244 | 4 | 8 | 607 | 214 | 809 | 0.0 | 696 |
MS.gene058208.t1 | AT3G16940 | 58.140 | 602 | 244 | 4 | 8 | 607 | 241 | 836 | 0.0 | 695 |
MS.gene058208.t1 | AT3G16940 | 56.112 | 499 | 216 | 3 | 8 | 504 | 241 | 738 | 0.0 | 551 |
MS.gene058208.t1 | AT2G22300 | 33.657 | 618 | 352 | 15 | 12 | 599 | 331 | 920 | 5.85e-89 | 296 |
MS.gene058208.t1 | AT2G22300 | 33.657 | 618 | 352 | 15 | 12 | 599 | 389 | 978 | 1.75e-88 | 296 |
MS.gene058208.t1 | AT2G22300 | 33.657 | 618 | 352 | 15 | 12 | 599 | 389 | 978 | 1.75e-88 | 296 |
MS.gene058208.t1 | AT5G64220 | 31.230 | 618 | 350 | 13 | 15 | 599 | 423 | 998 | 3.62e-85 | 287 |
MS.gene058208.t1 | AT5G64220 | 31.230 | 618 | 350 | 13 | 15 | 599 | 423 | 998 | 3.62e-85 | 287 |
MS.gene058208.t1 | AT5G09410 | 31.964 | 560 | 341 | 12 | 69 | 599 | 287 | 835 | 9.39e-82 | 275 |
MS.gene058208.t1 | AT5G09410 | 31.964 | 560 | 341 | 12 | 69 | 599 | 408 | 956 | 5.56e-81 | 275 |
MS.gene058208.t1 | AT5G09410 | 31.964 | 560 | 341 | 12 | 69 | 599 | 390 | 938 | 7.70e-81 | 275 |
MS.gene058208.t1 | AT5G09410 | 31.964 | 560 | 341 | 12 | 69 | 599 | 467 | 1015 | 2.24e-80 | 274 |
MS.gene058208.t1 | AT1G67310 | 35.044 | 565 | 316 | 13 | 70 | 607 | 444 | 984 | 2.64e-70 | 246 |
Find 132 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGGATTTCCGCGACAAATT+TGG | 0.162843 | 2.2:+54452233 | MS.gene058208:CDS |
CATGAAGTGTATAAAACTTT+TGG | 0.232830 | 2.2:-54451994 | None:intergenic |
AAATTAACAACTTGGCTAAT+AGG | 0.247521 | 2.2:-54451774 | None:intergenic |
CAAACTCAGGGAATGGCTTT+TGG | 0.255377 | 2.2:+54452088 | MS.gene058208:CDS |
AGTTGGATCTGTCACCAAAT+TGG | 0.280566 | 2.2:-54452934 | None:intergenic |
GCCACAGACACACATTATAT+TGG | 0.281294 | 2.2:-54451643 | None:intergenic |
GTAAGGTTCTCAGCATTTAC+TGG | 0.282291 | 2.2:-54453116 | None:intergenic |
CAACTTGGCTAATAGGCTTA+TGG | 0.302970 | 2.2:-54451767 | None:intergenic |
GGCAATATCGTAAAATTCTA+TGG | 0.307153 | 2.2:+54453555 | MS.gene058208:CDS |
AATTTGTCTTAGGGAGAATA+TGG | 0.308955 | 2.2:+54452881 | MS.gene058208:intron |
TTCTTGCAGGTCCTAGTAAC+TGG | 0.310886 | 2.2:+54451585 | MS.gene058208:intron |
GCAGCAGGATCGTGCAAAAT+AGG | 0.312540 | 2.2:-54451810 | None:intergenic |
CTTCATTGGGCAGCATATAA+TGG | 0.325901 | 2.2:+54452266 | MS.gene058208:CDS |
TCCATCACCAGTGATGAAAA+TGG | 0.327471 | 2.2:-54451370 | None:intergenic |
TTTGGAAAGAAATAATGTTT+TGG | 0.330089 | 2.2:-54451976 | None:intergenic |
AGGTTGGAGTTTACCGATGC+TGG | 0.332809 | 2.2:+54451694 | MS.gene058208:CDS |
TCGATGCAGGCTGCATTTAG+AGG | 0.340503 | 2.2:+54453518 | MS.gene058208:intron |
ATCTGGCGTGCTTCCTCCTC+TGG | 0.351586 | 2.2:-54453269 | None:intergenic |
CACGCATACAAGCAGCGTTT+AGG | 0.356504 | 2.2:+54453201 | MS.gene058208:CDS |
TTGGATGGACAGCTCTTCAT+TGG | 0.360303 | 2.2:+54452252 | MS.gene058208:CDS |
GTTGGATCTGTCACCAAATT+GGG | 0.373235 | 2.2:-54452933 | None:intergenic |
TTGCAAAGTCAGATTACCTT+TGG | 0.380536 | 2.2:+54451259 | MS.gene058208:CDS |
TGTTCCTGTAGAAATTGTTC+AGG | 0.386765 | 2.2:+54451674 | MS.gene058208:CDS |
ACGCATACAAGCAGCGTTTA+GGG | 0.390302 | 2.2:+54453202 | MS.gene058208:CDS |
GTAATATGAAATACTTGTTC+CGG | 0.401537 | 2.2:-54451412 | None:intergenic |
TCCAGTACAGATTCCGTTCA+TGG | 0.405822 | 2.2:+54453366 | MS.gene058208:CDS |
AGAGGACCAAGTGTACTTAA+AGG | 0.409759 | 2.2:+54453139 | MS.gene058208:CDS |
TAATCAACAATCTTCTCTTC+CGG | 0.411008 | 2.2:+54451393 | MS.gene058208:CDS |
CTGGATCAGATGTAGTGGTT+TGG | 0.411433 | 2.2:-54453097 | None:intergenic |
TTCAATGACATGAGCTTAGC+TGG | 0.412581 | 2.2:+54453056 | MS.gene058208:CDS |
AAGAATCATTCTATGAATCT+TGG | 0.418069 | 2.2:+54451199 | None:intergenic |
CGTAAAATTCTATGGTCTGT+TGG | 0.422461 | 2.2:+54453563 | MS.gene058208:CDS |
AGTACACTTGGTCCTCTGTA+AGG | 0.423640 | 2.2:-54453133 | None:intergenic |
TTGTGGAGCAAAGCCCAATT+TGG | 0.424453 | 2.2:+54452920 | MS.gene058208:CDS |
CTGCTGCCTCGGCTGTTGTC+CGG | 0.435310 | 2.2:-54453178 | None:intergenic |
AGGATACATTGGCAGCTTAC+CGG | 0.443232 | 2.2:+54453159 | MS.gene058208:CDS |
AAGCACAACAAGAGTATAGC+AGG | 0.445270 | 2.2:+54453786 | MS.gene058208:CDS |
AGTACAGCCACCAGGGTATT+CGG | 0.445573 | 2.2:-54452958 | None:intergenic |
TTGAATTTCGTCTTCAAATG+AGG | 0.446176 | 2.2:+54451859 | MS.gene058208:CDS |
CCGTGGGCTTGAGGTGAATC+CGG | 0.447115 | 2.2:+54453634 | MS.gene058208:CDS |
CACACAAATGAATTACACTT+TGG | 0.449905 | 2.2:-54452157 | None:intergenic |
TCATCTTTCATGTCTTCGTC+CGG | 0.452729 | 2.2:-54453653 | None:intergenic |
TACTGAGGTGGCCCCTTCGT+GGG | 0.453889 | 2.2:+54451432 | MS.gene058208:CDS |
AATTCATTTGTGTGCAATGT+TGG | 0.456072 | 2.2:+54452166 | MS.gene058208:CDS |
TTCGTGGTCAGGCTTGTCGC+TGG | 0.456278 | 2.2:+54452214 | MS.gene058208:CDS |
TTAGTCTCTTTCAGTGCAGT+AGG | 0.457802 | 2.2:-54451942 | None:intergenic |
TTACTGAGGTGGCCCCTTCG+TGG | 0.464196 | 2.2:+54451431 | MS.gene058208:CDS |
GTTTCTCCACATGCGACGTC+AGG | 0.466290 | 2.2:+54453403 | MS.gene058208:CDS |
GTTGACACTTTAGTCAATGA+AGG | 0.469768 | 2.2:+54451235 | MS.gene058208:CDS |
TGGGTAATGCCGCATTCTCC+TGG | 0.471161 | 2.2:+54451714 | MS.gene058208:CDS |
TTATCTTTCAGAAAAGTGTC+TGG | 0.473332 | 2.2:+54453025 | MS.gene058208:CDS |
GTGCAATGTTGGGATATACT+TGG | 0.476598 | 2.2:+54452177 | MS.gene058208:CDS |
TTGTATGCGTGCTGCTGCCT+CGG | 0.476655 | 2.2:-54453189 | None:intergenic |
TCCATGAACGGAATCTGTAC+TGG | 0.477269 | 2.2:-54453367 | None:intergenic |
CAGTGGAAGAGACATACAAC+TGG | 0.483109 | 2.2:+54451835 | MS.gene058208:CDS |
CCACCAGGGTATTCGGTAGT+TGG | 0.483552 | 2.2:-54452951 | None:intergenic |
AAATAGAGATTCACAAATCC+AGG | 0.484484 | 2.2:-54451732 | None:intergenic |
CCTGTAGAAATTGTTCAGGT+TGG | 0.492274 | 2.2:+54451678 | MS.gene058208:CDS |
GAGAAAACATCAAGGGTCTT+CGG | 0.497702 | 2.2:-54451906 | None:intergenic |
GAAGAGGACTTCTTTAAGAC+TGG | 0.502934 | 2.2:+54453695 | MS.gene058208:CDS |
AAGCAATGGCAGCCGCTGCT+CGG | 0.509734 | 2.2:+54453342 | MS.gene058208:CDS |
TGGATGGACAGCTCTTCATT+GGG | 0.509818 | 2.2:+54452253 | MS.gene058208:CDS |
ATTCATTTGTGTGCAATGTT+GGG | 0.510037 | 2.2:+54452167 | MS.gene058208:CDS |
AGAGAAAATATCCAGTTACT+AGG | 0.515300 | 2.2:-54451596 | None:intergenic |
AAAAGGTTTCCGTGGGCTTG+AGG | 0.516403 | 2.2:+54453625 | MS.gene058208:CDS |
GTCTCTTCCACTGAAGCAGC+AGG | 0.517570 | 2.2:-54451825 | None:intergenic |
ACATTATATTGGACTTTGCA+AGG | 0.517791 | 2.2:-54451632 | None:intergenic |
CTTGTTGTGCTTTCTTAGAA+CGG | 0.523973 | 2.2:-54453775 | None:intergenic |
AATGGATCAGTAACAGATGA+AGG | 0.524251 | 2.2:-54451352 | None:intergenic |
AGACATGAAAGATGAGAAGC+AGG | 0.524871 | 2.2:+54453661 | MS.gene058208:CDS |
GGTTGGAGTTTACCGATGCT+GGG | 0.525743 | 2.2:+54451695 | MS.gene058208:CDS |
GTTGCTACGTTGTTGTCTTG+TGG | 0.526879 | 2.2:+54452903 | MS.gene058208:CDS |
CCAACCTGAACAATTTCTAC+AGG | 0.529057 | 2.2:-54451678 | None:intergenic |
TCAGCAGCAGTACAGCCACC+AGG | 0.531177 | 2.2:-54452966 | None:intergenic |
GCACGATCCTGCTGCTTCAG+TGG | 0.534298 | 2.2:+54451818 | MS.gene058208:CDS |
GATATTCGAAATTAACAACT+TGG | 0.536878 | 2.2:-54451782 | None:intergenic |
AGGACTTCTTTAAGACTGGT+AGG | 0.538366 | 2.2:+54453699 | MS.gene058208:CDS |
GCTGATCTTGCTTATATGAA+AGG | 0.543937 | 2.2:+54452984 | MS.gene058208:CDS |
TTTCAACGCAATTTCGAACA+AGG | 0.546511 | 2.2:-54452063 | None:intergenic |
TGCTTTCTTAGAACGGAACA+TGG | 0.547354 | 2.2:-54453768 | None:intergenic |
AATCATTCTATGAATCTTGG+TGG | 0.549602 | 2.2:+54451202 | None:intergenic |
TTGAGAAAGTAATCCTGCGT+TGG | 0.551923 | 2.2:+54453591 | MS.gene058208:CDS |
TCTTGTCTCAAAGTTGCGAA+AGG | 0.552815 | 2.2:-54453318 | None:intergenic |
GCAGGAAAGCGATGTAGAAG+AGG | 0.559635 | 2.2:+54453679 | MS.gene058208:CDS |
AGAGTATAGCAGGATGAAGA+TGG | 0.564933 | 2.2:+54453796 | MS.gene058208:CDS |
ACTAAAATTGCGATATCAGT+CGG | 0.575281 | 2.2:+54453232 | MS.gene058208:CDS |
CAGTGGAAGAAACCCACGAA+GGG | 0.577636 | 2.2:-54451444 | None:intergenic |
TTCATTGACTAAAGTGTCAA+CGG | 0.579033 | 2.2:-54451233 | None:intergenic |
TTAAAGAGAAAAGGTTTCCG+TGG | 0.583364 | 2.2:+54453617 | MS.gene058208:CDS |
TAAAGAGAAAAGGTTTCCGT+GGG | 0.583584 | 2.2:+54453618 | MS.gene058208:CDS |
ATGTATCCTTTAAGTACACT+TGG | 0.583656 | 2.2:-54453145 | None:intergenic |
AGTGTACTTAAAGGATACAT+TGG | 0.584610 | 2.2:+54453148 | MS.gene058208:CDS |
GCTTATATGAAAGGATATGA+CGG | 0.585929 | 2.2:+54452993 | MS.gene058208:CDS |
AGTATTTCATATTACTGAGG+TGG | 0.586077 | 2.2:+54451420 | MS.gene058208:CDS |
ATTTACTGGATCAGATGTAG+TGG | 0.586177 | 2.2:-54453102 | None:intergenic |
ATTGTTCATCCACGTTCCAA+AGG | 0.586185 | 2.2:-54451275 | None:intergenic |
ATTTCCGCGACAAATTTGGA+TGG | 0.586245 | 2.2:+54452237 | MS.gene058208:CDS |
CTTCACTAGAGAAAACATCA+AGG | 0.586742 | 2.2:-54451914 | None:intergenic |
TAATAGCCTGACGTCGCATG+TGG | 0.587369 | 2.2:-54453409 | None:intergenic |
GTCAGATTACCTTTGGAACG+TGG | 0.587583 | 2.2:+54451266 | MS.gene058208:CDS |
TCAATTTATCAGTCCAGAGG+AGG | 0.588337 | 2.2:+54453256 | MS.gene058208:CDS |
AGAACATGGTGTGTAAGATA+CGG | 0.588615 | 2.2:-54451299 | None:intergenic |
CTCTACGCAACTTCCATGAA+CGG | 0.595420 | 2.2:-54453379 | None:intergenic |
CAGCAGCAGTACAGCCACCA+GGG | 0.604424 | 2.2:-54452965 | None:intergenic |
TTAGAGGCTTTCAAGTGCGT+AGG | 0.607046 | 2.2:+54453534 | MS.gene058208:CDS |
TTCTCTTTAAAAGCCAACGC+AGG | 0.610360 | 2.2:-54453604 | None:intergenic |
TGCAATGTTGGGATATACTT+GGG | 0.615912 | 2.2:+54452178 | MS.gene058208:CDS |
AGCTTACCGGACAACAGCCG+AGG | 0.619242 | 2.2:+54453172 | MS.gene058208:CDS |
TTCACAAATCCAGGAGAATG+CGG | 0.627682 | 2.2:-54451723 | None:intergenic |
TTCTTCCACTGAGAAAACAA+AGG | 0.631295 | 2.2:+54451456 | MS.gene058208:CDS |
AGCTTAGCTGGAAATATCAG+TGG | 0.631881 | 2.2:+54453068 | MS.gene058208:CDS |
CTTTGAGACAAGAAAAGCAA+TGG | 0.633518 | 2.2:+54453328 | MS.gene058208:CDS |
GATGGCACATAGTCAAGCAA+AGG | 0.635449 | 2.2:+54453814 | MS.gene058208:CDS |
TTCACTAGAGAAAACATCAA+GGG | 0.636868 | 2.2:-54451913 | None:intergenic |
AATGCGGCATTACCCAGCAT+CGG | 0.640461 | 2.2:-54451707 | None:intergenic |
CCGGATTCACCTCAAGCCCA+CGG | 0.642313 | 2.2:-54453634 | None:intergenic |
TTACACACCATGTTCTGTAG+AGG | 0.653988 | 2.2:+54451306 | MS.gene058208:CDS |
TAAGACTGGTAGGAAACAAG+CGG | 0.659485 | 2.2:+54453709 | MS.gene058208:CDS |
GGTTCAATTTATCAGTCCAG+AGG | 0.660144 | 2.2:+54453253 | MS.gene058208:CDS |
CTGTCCATCCAAATTTGTCG+CGG | 0.660885 | 2.2:-54452241 | None:intergenic |
ACAAGTATTTCATATTACTG+AGG | 0.664709 | 2.2:+54451417 | MS.gene058208:CDS |
TCCAATATAATGTGTGTCTG+TGG | 0.683099 | 2.2:+54451642 | MS.gene058208:CDS |
AGTGGAAGAAACCCACGAAG+GGG | 0.688757 | 2.2:-54451443 | None:intergenic |
GTTGACGCCTCTACAGAACA+TGG | 0.690824 | 2.2:-54451313 | None:intergenic |
GATCCAACTACCGAATACCC+TGG | 0.692497 | 2.2:+54452948 | MS.gene058208:CDS |
TCTGTACTGGATCCGAGCAG+CGG | 0.708022 | 2.2:-54453354 | None:intergenic |
AGAACGCGTTGAGAGATCTG+TGG | 0.723214 | 2.2:+54453733 | MS.gene058208:CDS |
ACTACTGAGTATGATGCACA+AGG | 0.723260 | 2.2:+54452134 | MS.gene058208:CDS |
AGTGGAAGAGACATACAACT+GGG | 0.727869 | 2.2:+54451836 | MS.gene058208:CDS |
TCAGTGGAAGAAACCCACGA+AGG | 0.732652 | 2.2:-54451445 | None:intergenic |
AAATGCTGAGAACCTTACAG+AGG | 0.749608 | 2.2:+54453121 | MS.gene058208:CDS |
CCAACTACCGAATACCCTGG+TGG | 0.762091 | 2.2:+54452951 | MS.gene058208:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAACTGTAATTATTTTGTTA+TGG | + | chr2.2:54451505-54451524 | MS.gene058208:intron | 15.0% |
!! | ATAGTTATGTATGTATCTTT+AGG | - | chr2.2:54452732-54452751 | None:intergenic | 20.0% |
!! | CAATTCTAATTGCAAAATAA+TGG | - | chr2.2:54451546-54451565 | None:intergenic | 20.0% |
!! | GACAAATTTCATATAGTTTA+AGG | - | chr2.2:54452446-54452465 | None:intergenic | 20.0% |
!! | GATATATGAGAAAAAGAAAA+AGG | - | chr2.2:54451485-54451504 | None:intergenic | 20.0% |
!! | TAGTTATGTATGTATCTTTA+GGG | - | chr2.2:54452731-54452750 | None:intergenic | 20.0% |
!!! | TTTGGAAAGAAATAATGTTT+TGG | - | chr2.2:54451979-54451998 | None:intergenic | 20.0% |
!!! | TTTGTTTGAAATTTGTCTTA+GGG | + | chr2.2:54452872-54452891 | MS.gene058208:intron | 20.0% |
! | AAATTAACAACTTGGCTAAT+AGG | - | chr2.2:54451777-54451796 | None:intergenic | 25.0% |
! | ACAAGTATTTCATATTACTG+AGG | + | chr2.2:54451417-54451436 | MS.gene058208:CDS | 25.0% |
! | ACCAAAATGGAATAATTTGA+CGG | - | chr2.2:54452495-54452514 | None:intergenic | 25.0% |
! | CAACTTAAAGAGAAAAATTC+AGG | - | chr2.2:54453475-54453494 | None:intergenic | 25.0% |
! | GATATTCGAAATTAACAACT+TGG | - | chr2.2:54451785-54451804 | None:intergenic | 25.0% |
! | GTAATATGAAATACTTGTTC+CGG | - | chr2.2:54451415-54451434 | None:intergenic | 25.0% |
! | TCTAATTGCAAAATAATGGT+AGG | - | chr2.2:54451542-54451561 | None:intergenic | 25.0% |
!! | CATGAAGTGTATAAAACTTT+TGG | - | chr2.2:54451997-54452016 | None:intergenic | 25.0% |
!! | GTTTGTTTGAAATTTGTCTT+AGG | + | chr2.2:54452871-54452890 | MS.gene058208:intron | 25.0% |
!! | TTAAGTTGTTAATGCTTGAT+TGG | + | chr2.2:54453487-54453506 | MS.gene058208:intron | 25.0% |
AAACAATGATATTTCCGTTC+AGG | - | chr2.2:54452851-54452870 | None:intergenic | 30.0% | |
AAATAGAGATTCACAAATCC+AGG | - | chr2.2:54451735-54451754 | None:intergenic | 30.0% | |
AATCTGTTTGTTCAAACAAG+TGG | - | chr2.2:54452313-54452332 | None:intergenic | 30.0% | |
AATTCATTTGTGTGCAATGT+TGG | + | chr2.2:54452166-54452185 | MS.gene058208:CDS | 30.0% | |
AATTTGTCTTAGGGAGAATA+TGG | + | chr2.2:54452881-54452900 | MS.gene058208:intron | 30.0% | |
ACATTATATTGGACTTTGCA+AGG | - | chr2.2:54451635-54451654 | None:intergenic | 30.0% | |
ACTAAAATTGCGATATCAGT+CGG | + | chr2.2:54453232-54453251 | MS.gene058208:CDS | 30.0% | |
ACTTAGGAGACAAAATTGAT+GGG | - | chr2.2:54452373-54452392 | None:intergenic | 30.0% | |
AGAGAAAATATCCAGTTACT+AGG | - | chr2.2:54451599-54451618 | None:intergenic | 30.0% | |
AGTATTTCATATTACTGAGG+TGG | + | chr2.2:54451420-54451439 | MS.gene058208:CDS | 30.0% | |
AGTGTACTTAAAGGATACAT+TGG | + | chr2.2:54453148-54453167 | MS.gene058208:CDS | 30.0% | |
ATATAGTTTAGAGACCAAAC+AGG | + | chr2.2:54452617-54452636 | MS.gene058208:intron | 30.0% | |
ATGTATCCTTTAAGTACACT+TGG | - | chr2.2:54453148-54453167 | None:intergenic | 30.0% | |
ATTCATTTGTGTGCAATGTT+GGG | + | chr2.2:54452167-54452186 | MS.gene058208:CDS | 30.0% | |
CAAAATAATGGTAGGAAAGA+AGG | - | chr2.2:54451534-54451553 | None:intergenic | 30.0% | |
CAATTAGAATTGAACATCCA+TGG | + | chr2.2:54451554-54451573 | MS.gene058208:intron | 30.0% | |
CACACAAATGAATTACACTT+TGG | - | chr2.2:54452160-54452179 | None:intergenic | 30.0% | |
CTTGTTAGTATACACCAAAA+TGG | - | chr2.2:54452508-54452527 | None:intergenic | 30.0% | |
GAAGCAATGTCAGAAAAATT+GGG | - | chr2.2:54452679-54452698 | None:intergenic | 30.0% | |
GCTTATATGAAAGGATATGA+CGG | + | chr2.2:54452993-54453012 | MS.gene058208:CDS | 30.0% | |
GGCAATATCGTAAAATTCTA+TGG | + | chr2.2:54453555-54453574 | MS.gene058208:CDS | 30.0% | |
GTATACTAACAAGAGATACT+AGG | + | chr2.2:54452515-54452534 | MS.gene058208:intron | 30.0% | |
TAATCAACAATCTTCTCTTC+CGG | + | chr2.2:54451393-54451412 | MS.gene058208:CDS | 30.0% | |
TACTTAGGAGACAAAATTGA+TGG | - | chr2.2:54452374-54452393 | None:intergenic | 30.0% | |
TAGTTTAGAGACTAACTTGA+CGG | + | chr2.2:54452560-54452579 | MS.gene058208:intron | 30.0% | |
TGAAGCAATGTCAGAAAAAT+TGG | - | chr2.2:54452680-54452699 | None:intergenic | 30.0% | |
TTCACTAGAGAAAACATCAA+GGG | - | chr2.2:54451916-54451935 | None:intergenic | 30.0% | |
TTGAATTTCGTCTTCAAATG+AGG | + | chr2.2:54451859-54451878 | MS.gene058208:CDS | 30.0% | |
! | ATCATTAAGTTAAGCACTGT+AGG | + | chr2.2:54452767-54452786 | MS.gene058208:intron | 30.0% |
! | ATTGGTTATATTTTCGATGC+AGG | + | chr2.2:54453505-54453524 | MS.gene058208:intron | 30.0% |
! | GACGGATTTCATTTAGTTTA+TGG | - | chr2.2:54452477-54452496 | None:intergenic | 30.0% |
! | TCATTAAGTTAAGCACTGTA+GGG | + | chr2.2:54452768-54452787 | MS.gene058208:intron | 30.0% |
! | TCCGTCAAATTATTCCATTT+TGG | + | chr2.2:54452491-54452510 | MS.gene058208:intron | 30.0% |
! | TTCATTGACTAAAGTGTCAA+CGG | - | chr2.2:54451236-54451255 | None:intergenic | 30.0% |
!! | GGAAAGAAATAATGTTTTGG+AGG | - | chr2.2:54451976-54451995 | None:intergenic | 30.0% |
!! | TTATCTTTCAGAAAAGTGTC+TGG | + | chr2.2:54453025-54453044 | MS.gene058208:CDS | 30.0% |
!!! | CTTTTGGAACGTATTGTTTT+AGG | + | chr2.2:54452104-54452123 | MS.gene058208:CDS | 30.0% |
AATCTAGTTATGAGCCTGAA+CGG | + | chr2.2:54452834-54452853 | MS.gene058208:intron | 35.0% | |
AATGGATCAGTAACAGATGA+AGG | - | chr2.2:54451355-54451374 | None:intergenic | 35.0% | |
AATTGGGTAAACCATCCATT+TGG | - | chr2.2:54452663-54452682 | None:intergenic | 35.0% | |
AGAACATGGTGTGTAAGATA+CGG | - | chr2.2:54451302-54451321 | None:intergenic | 35.0% | |
AGGCTCATAACTAGATTAGA+AGG | - | chr2.2:54452831-54452850 | None:intergenic | 35.0% | |
ATTTACTGGATCAGATGTAG+TGG | - | chr2.2:54453105-54453124 | None:intergenic | 35.0% | |
CGTAAAATTCTATGGTCTGT+TGG | + | chr2.2:54453563-54453582 | MS.gene058208:CDS | 35.0% | |
CTTCACTAGAGAAAACATCA+AGG | - | chr2.2:54451917-54451936 | None:intergenic | 35.0% | |
GATACTAGGAACTAAAGAAG+CGG | + | chr2.2:54452529-54452548 | MS.gene058208:intron | 35.0% | |
GCTGATCTTGCTTATATGAA+AGG | + | chr2.2:54452984-54453003 | MS.gene058208:CDS | 35.0% | |
GTTGACACTTTAGTCAATGA+AGG | + | chr2.2:54451235-54451254 | MS.gene058208:CDS | 35.0% | |
TAAAGAGAAAAGGTTTCCGT+GGG | + | chr2.2:54453618-54453637 | MS.gene058208:CDS | 35.0% | |
TCCAATATAATGTGTGTCTG+TGG | + | chr2.2:54451642-54451661 | MS.gene058208:CDS | 35.0% | |
TGAAAAACAAACTCAGGGAA+TGG | + | chr2.2:54452081-54452100 | MS.gene058208:CDS | 35.0% | |
TGCAATGTTGGGATATACTT+GGG | + | chr2.2:54452178-54452197 | MS.gene058208:CDS | 35.0% | |
TGCGTTGAAAAACAAACTCA+GGG | + | chr2.2:54452076-54452095 | MS.gene058208:CDS | 35.0% | |
TGTTCCTGTAGAAATTGTTC+AGG | + | chr2.2:54451674-54451693 | MS.gene058208:CDS | 35.0% | |
TTAAAGAGAAAAGGTTTCCG+TGG | + | chr2.2:54453617-54453636 | MS.gene058208:CDS | 35.0% | |
TTCTTCCACTGAGAAAACAA+AGG | + | chr2.2:54451456-54451475 | MS.gene058208:CDS | 35.0% | |
TTGCAAAGTCAGATTACCTT+TGG | + | chr2.2:54451259-54451278 | MS.gene058208:CDS | 35.0% | |
TTGCGTTGAAAAACAAACTC+AGG | + | chr2.2:54452075-54452094 | MS.gene058208:CDS | 35.0% | |
TTTCAACGCAATTTCGAACA+AGG | - | chr2.2:54452066-54452085 | None:intergenic | 35.0% | |
! | CTTGTTGTGCTTTCTTAGAA+CGG | - | chr2.2:54453778-54453797 | None:intergenic | 35.0% |
! | GTATTTTTCGCTTGCAGAAA+GGG | - | chr2.2:54452044-54452063 | None:intergenic | 35.0% |
! | TACTGATCCATTTTCATCAC+TGG | + | chr2.2:54451363-54451382 | MS.gene058208:CDS | 35.0% |
! | TTTTCATTGCTGCTACTATC+TGG | - | chr2.2:54453289-54453308 | None:intergenic | 35.0% |
!! | CTAACTTGACGGATTTCATA+TGG | + | chr2.2:54452571-54452590 | MS.gene058208:intron | 35.0% |
!! | CTTTGAGACAAGAAAAGCAA+TGG | + | chr2.2:54453328-54453347 | MS.gene058208:CDS | 35.0% |
!! | TTAAGCACTGTAGGGTTTTT+AGG | + | chr2.2:54452776-54452795 | MS.gene058208:intron | 35.0% |
!!! | ATTACTTTGTTTTCGTGGTC+AGG | + | chr2.2:54452203-54452222 | MS.gene058208:CDS | 35.0% |
!!! | CGTTGGCTTTTAAAGAGAAA+AGG | + | chr2.2:54453608-54453627 | MS.gene058208:CDS | 35.0% |
AAATGCTGAGAACCTTACAG+AGG | + | chr2.2:54453121-54453140 | MS.gene058208:CDS | 40.0% | |
AAGTATCACACTCTCCTGTT+TGG | - | chr2.2:54452634-54452653 | None:intergenic | 40.0% | |
ACTACTGAGTATGATGCACA+AGG | + | chr2.2:54452134-54452153 | MS.gene058208:CDS | 40.0% | |
AGACATGAAAGATGAGAAGC+AGG | + | chr2.2:54453661-54453680 | MS.gene058208:CDS | 40.0% | |
AGAGGACCAAGTGTACTTAA+AGG | + | chr2.2:54453139-54453158 | MS.gene058208:CDS | 40.0% | |
AGAGTATAGCAGGATGAAGA+TGG | + | chr2.2:54453796-54453815 | MS.gene058208:CDS | 40.0% | |
AGCTTAGCTGGAAATATCAG+TGG | + | chr2.2:54453068-54453087 | MS.gene058208:CDS | 40.0% | |
AGTGGAAGAGACATACAACT+GGG | + | chr2.2:54451836-54451855 | MS.gene058208:CDS | 40.0% | |
AGTTGGATCTGTCACCAAAT+TGG | - | chr2.2:54452937-54452956 | None:intergenic | 40.0% | |
ATTGTTCATCCACGTTCCAA+AGG | - | chr2.2:54451278-54451297 | None:intergenic | 40.0% | |
ATTTCCGCGACAAATTTGGA+TGG | + | chr2.2:54452237-54452256 | MS.gene058208:CDS | 40.0% | |
CAACTTGGCTAATAGGCTTA+TGG | - | chr2.2:54451770-54451789 | None:intergenic | 40.0% | |
CCAACCTGAACAATTTCTAC+AGG | - | chr2.2:54451681-54451700 | None:intergenic | 40.0% | |
CCTGTAGAAATTGTTCAGGT+TGG | + | chr2.2:54451678-54451697 | MS.gene058208:CDS | 40.0% | |
CTTCATTGGGCAGCATATAA+TGG | + | chr2.2:54452266-54452285 | MS.gene058208:CDS | 40.0% | |
GAGAAAACATCAAGGGTCTT+CGG | - | chr2.2:54451909-54451928 | None:intergenic | 40.0% | |
GCCACAGACACACATTATAT+TGG | - | chr2.2:54451646-54451665 | None:intergenic | 40.0% | |
GGTTCAATTTATCAGTCCAG+AGG | + | chr2.2:54453253-54453272 | MS.gene058208:CDS | 40.0% | |
GTAAGGTTCTCAGCATTTAC+TGG | - | chr2.2:54453119-54453138 | None:intergenic | 40.0% | |
GTGATACTTGAGAGACCAAA+TGG | + | chr2.2:54452645-54452664 | MS.gene058208:intron | 40.0% | |
GTGCAATGTTGGGATATACT+TGG | + | chr2.2:54452177-54452196 | MS.gene058208:CDS | 40.0% | |
GTTGGATCTGTCACCAAATT+GGG | - | chr2.2:54452936-54452955 | None:intergenic | 40.0% | |
GTTTGTTCAAACAAGTGGAG+TGG | - | chr2.2:54452308-54452327 | None:intergenic | 40.0% | |
TAAGACTGGTAGGAAACAAG+CGG | + | chr2.2:54453709-54453728 | MS.gene058208:CDS | 40.0% | |
TACTTGAGAGACCAAATGGA+TGG | + | chr2.2:54452649-54452668 | MS.gene058208:intron | 40.0% | |
TAGCAGTGAGAGTGATACTT+AGG | - | chr2.2:54452389-54452408 | None:intergenic | 40.0% | |
TAGGACCTGCAAGAAGTAAA+GGG | - | chr2.2:54451580-54451599 | None:intergenic | 40.0% | |
TCAATTTATCAGTCCAGAGG+AGG | + | chr2.2:54453256-54453275 | MS.gene058208:CDS | 40.0% | |
TCATCTTTCATGTCTTCGTC+CGG | - | chr2.2:54453656-54453675 | None:intergenic | 40.0% | |
TCCATCACCAGTGATGAAAA+TGG | - | chr2.2:54451373-54451392 | None:intergenic | 40.0% | |
TCTTGTCTCAAAGTTGCGAA+AGG | - | chr2.2:54453321-54453340 | None:intergenic | 40.0% | |
TGCTTTCTTAGAACGGAACA+TGG | - | chr2.2:54453771-54453790 | None:intergenic | 40.0% | |
TTACACACCATGTTCTGTAG+AGG | + | chr2.2:54451306-54451325 | MS.gene058208:CDS | 40.0% | |
TTAGTCTCTTTCAGTGCAGT+AGG | - | chr2.2:54451945-54451964 | None:intergenic | 40.0% | |
TTCAATGACATGAGCTTAGC+TGG | + | chr2.2:54453056-54453075 | MS.gene058208:CDS | 40.0% | |
TTCACAAATCCAGGAGAATG+CGG | - | chr2.2:54451726-54451745 | None:intergenic | 40.0% | |
TTGAGAAAGTAATCCTGCGT+TGG | + | chr2.2:54453591-54453610 | MS.gene058208:CDS | 40.0% | |
! | AAGCACAACAAGAGTATAGC+AGG | + | chr2.2:54453786-54453805 | MS.gene058208:CDS | 40.0% |
! | GACGGATTTCATATGGTTCA+AGG | + | chr2.2:54452578-54452597 | MS.gene058208:intron | 40.0% |
! | GGTATTTTTCGCTTGCAGAA+AGG | - | chr2.2:54452045-54452064 | None:intergenic | 40.0% |
! | TCCATTTTCATCACTGGTGA+TGG | + | chr2.2:54451369-54451388 | MS.gene058208:CDS | 40.0% |
! | TTCTCTTTAAAAGCCAACGC+AGG | - | chr2.2:54453607-54453626 | None:intergenic | 40.0% |
!! | AGGACTTCTTTAAGACTGGT+AGG | + | chr2.2:54453699-54453718 | MS.gene058208:CDS | 40.0% |
!! | GAAGAGGACTTCTTTAAGAC+TGG | + | chr2.2:54453695-54453714 | MS.gene058208:CDS | 40.0% |
!!! | GGAAACCTTTGTTTTCTCAG+TGG | - | chr2.2:54451464-54451483 | None:intergenic | 40.0% |
!!! | GGGCTATTACTTTGTTTTCG+TGG | + | chr2.2:54452198-54452217 | MS.gene058208:CDS | 40.0% |
ACGCATACAAGCAGCGTTTA+GGG | + | chr2.2:54453202-54453221 | MS.gene058208:CDS | 45.0% | |
AGGATACATTGGCAGCTTAC+CGG | + | chr2.2:54453159-54453178 | MS.gene058208:CDS | 45.0% | |
AGTACACTTGGTCCTCTGTA+AGG | - | chr2.2:54453136-54453155 | None:intergenic | 45.0% | |
CAGTGGAAGAGACATACAAC+TGG | + | chr2.2:54451835-54451854 | MS.gene058208:CDS | 45.0% | |
CTAGGACCTGCAAGAAGTAA+AGG | - | chr2.2:54451581-54451600 | None:intergenic | 45.0% | |
CTCTACGCAACTTCCATGAA+CGG | - | chr2.2:54453382-54453401 | None:intergenic | 45.0% | |
CTGGATCAGATGTAGTGGTT+TGG | - | chr2.2:54453100-54453119 | None:intergenic | 45.0% | |
CTGGATTTCCGCGACAAATT+TGG | + | chr2.2:54452233-54452252 | MS.gene058208:CDS | 45.0% | |
CTGTCCATCCAAATTTGTCG+CGG | - | chr2.2:54452244-54452263 | None:intergenic | 45.0% | |
GTTGCTACGTTGTTGTCTTG+TGG | + | chr2.2:54452903-54452922 | MS.gene058208:CDS | 45.0% | |
TCCAGTACAGATTCCGTTCA+TGG | + | chr2.2:54453366-54453385 | MS.gene058208:CDS | 45.0% | |
TCCATGAACGGAATCTGTAC+TGG | - | chr2.2:54453370-54453389 | None:intergenic | 45.0% | |
TGGATGGACAGCTCTTCATT+GGG | + | chr2.2:54452253-54452272 | MS.gene058208:CDS | 45.0% | |
TTCTTGCAGGTCCTAGTAAC+TGG | + | chr2.2:54451585-54451604 | MS.gene058208:intron | 45.0% | |
TTGGATGGACAGCTCTTCAT+TGG | + | chr2.2:54452252-54452271 | MS.gene058208:CDS | 45.0% | |
TTGTGGAGCAAAGCCCAATT+TGG | + | chr2.2:54452920-54452939 | MS.gene058208:CDS | 45.0% | |
! | CAAACTCAGGGAATGGCTTT+TGG | + | chr2.2:54452088-54452107 | MS.gene058208:CDS | 45.0% |
! | TTAGAGGCTTTCAAGTGCGT+AGG | + | chr2.2:54453534-54453553 | MS.gene058208:CDS | 45.0% |
! | TTTTTCGCTTGCAGAAAGGG+AGG | - | chr2.2:54452041-54452060 | None:intergenic | 45.0% |
!! | GTCAGATTACCTTTGGAACG+TGG | + | chr2.2:54451266-54451285 | MS.gene058208:CDS | 45.0% |
!!! | TTATTATTTTTATAAACTTT+AGG | - | chr2.2:54452418-54452437 | None:intergenic | 5.0% |
AAAAGGTTTCCGTGGGCTTG+AGG | + | chr2.2:54453625-54453644 | MS.gene058208:CDS | 50.0% | |
AATGCGGCATTACCCAGCAT+CGG | - | chr2.2:54451710-54451729 | None:intergenic | 50.0% | |
AGAACGCGTTGAGAGATCTG+TGG | + | chr2.2:54453733-54453752 | MS.gene058208:CDS | 50.0% | |
AGGTTGGAGTTTACCGATGC+TGG | + | chr2.2:54451694-54451713 | MS.gene058208:CDS | 50.0% | |
AGTGGAAGAAACCCACGAAG+GGG | - | chr2.2:54451446-54451465 | None:intergenic | 50.0% | |
CACGCATACAAGCAGCGTTT+AGG | + | chr2.2:54453201-54453220 | MS.gene058208:CDS | 50.0% | |
CAGTGGAAGAAACCCACGAA+GGG | - | chr2.2:54451447-54451466 | None:intergenic | 50.0% | |
CATGGCCCTTTACTTCTTGC+AGG | + | chr2.2:54451572-54451591 | MS.gene058208:intron | 50.0% | |
CTGCAAGAAGTAAAGGGCCA+TGG | - | chr2.2:54451574-54451593 | None:intergenic | 50.0% | |
GATCCAACTACCGAATACCC+TGG | + | chr2.2:54452948-54452967 | MS.gene058208:CDS | 50.0% | |
GCAGCAGGATCGTGCAAAAT+AGG | - | chr2.2:54451813-54451832 | None:intergenic | 50.0% | |
GCAGGAAAGCGATGTAGAAG+AGG | + | chr2.2:54453679-54453698 | MS.gene058208:CDS | 50.0% | |
GGTTGGAGTTTACCGATGCT+GGG | + | chr2.2:54451695-54451714 | MS.gene058208:CDS | 50.0% | |
GTTGACGCCTCTACAGAACA+TGG | - | chr2.2:54451316-54451335 | None:intergenic | 50.0% | |
TAATAGCCTGACGTCGCATG+TGG | - | chr2.2:54453412-54453431 | None:intergenic | 50.0% | |
TCAGTGGAAGAAACCCACGA+AGG | - | chr2.2:54451448-54451467 | None:intergenic | 50.0% | |
TCGATGCAGGCTGCATTTAG+AGG | + | chr2.2:54453518-54453537 | MS.gene058208:intron | 50.0% | |
! | AGTACAGCCACCAGGGTATT+CGG | - | chr2.2:54452961-54452980 | None:intergenic | 50.0% |
CCAACTACCGAATACCCTGG+TGG | + | chr2.2:54452951-54452970 | MS.gene058208:CDS | 55.0% | |
GTCTCTTCCACTGAAGCAGC+AGG | - | chr2.2:54451828-54451847 | None:intergenic | 55.0% | |
GTTTCTCCACATGCGACGTC+AGG | + | chr2.2:54453403-54453422 | MS.gene058208:CDS | 55.0% | |
TCTGTACTGGATCCGAGCAG+CGG | - | chr2.2:54453357-54453376 | None:intergenic | 55.0% | |
TGGGTAATGCCGCATTCTCC+TGG | + | chr2.2:54451714-54451733 | MS.gene058208:CDS | 55.0% | |
! | CCACCAGGGTATTCGGTAGT+TGG | - | chr2.2:54452954-54452973 | None:intergenic | 55.0% |
! | TTGTATGCGTGCTGCTGCCT+CGG | - | chr2.2:54453192-54453211 | None:intergenic | 55.0% |
AAGCAATGGCAGCCGCTGCT+CGG | + | chr2.2:54453342-54453361 | MS.gene058208:CDS | 60.0% | |
AGCTTACCGGACAACAGCCG+AGG | + | chr2.2:54453172-54453191 | MS.gene058208:CDS | 60.0% | |
ATCTGGCGTGCTTCCTCCTC+TGG | - | chr2.2:54453272-54453291 | None:intergenic | 60.0% | |
CAGCAGCAGTACAGCCACCA+GGG | - | chr2.2:54452968-54452987 | None:intergenic | 60.0% | |
CCGGATTCACCTCAAGCCCA+CGG | - | chr2.2:54453637-54453656 | None:intergenic | 60.0% | |
CCGTGGGCTTGAGGTGAATC+CGG | + | chr2.2:54453634-54453653 | MS.gene058208:CDS | 60.0% | |
TACTGAGGTGGCCCCTTCGT+GGG | + | chr2.2:54451432-54451451 | MS.gene058208:CDS | 60.0% | |
TCAGCAGCAGTACAGCCACC+AGG | - | chr2.2:54452969-54452988 | None:intergenic | 60.0% | |
TTACTGAGGTGGCCCCTTCG+TGG | + | chr2.2:54451431-54451450 | MS.gene058208:CDS | 60.0% | |
TTCGTGGTCAGGCTTGTCGC+TGG | + | chr2.2:54452214-54452233 | MS.gene058208:CDS | 60.0% | |
! | GCACGATCCTGCTGCTTCAG+TGG | + | chr2.2:54451818-54451837 | MS.gene058208:CDS | 60.0% |
CTGCTGCCTCGGCTGTTGTC+CGG | - | chr2.2:54453181-54453200 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 54451211 | 54453835 | 54451211 | ID=MS.gene058208 |
chr2.2 | mRNA | 54451211 | 54453835 | 54451211 | ID=MS.gene058208.t1;Parent=MS.gene058208 |
chr2.2 | exon | 54451211 | 54451477 | 54451211 | ID=MS.gene058208.t1.exon1;Parent=MS.gene058208.t1 |
chr2.2 | CDS | 54451211 | 54451477 | 54451211 | ID=cds.MS.gene058208.t1;Parent=MS.gene058208.t1 |
chr2.2 | exon | 54451594 | 54452291 | 54451594 | ID=MS.gene058208.t1.exon2;Parent=MS.gene058208.t1 |
chr2.2 | CDS | 54451594 | 54452291 | 54451594 | ID=cds.MS.gene058208.t1;Parent=MS.gene058208.t1 |
chr2.2 | exon | 54452893 | 54453439 | 54452893 | ID=MS.gene058208.t1.exon3;Parent=MS.gene058208.t1 |
chr2.2 | CDS | 54452893 | 54453439 | 54452893 | ID=cds.MS.gene058208.t1;Parent=MS.gene058208.t1 |
chr2.2 | exon | 54453527 | 54453835 | 54453527 | ID=MS.gene058208.t1.exon4;Parent=MS.gene058208.t1 |
chr2.2 | CDS | 54453527 | 54453835 | 54453527 | ID=cds.MS.gene058208.t1;Parent=MS.gene058208.t1 |
Gene Sequence |
Protein sequence |