Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070952.t1 | XP_013469771.1 | 90.6 | 459 | 39 | 3 | 1 | 458 | 1 | 456 | 6.20E-179 | 637.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070952.t1 | Q8W4K5 | 59.1 | 492 | 148 | 17 | 10 | 456 | 7 | 490 | 4.9e-100 | 366.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070952.t1 | A0A072VP59 | 90.6 | 459 | 39 | 3 | 1 | 458 | 1 | 456 | 4.5e-179 | 637.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059711 | MS.gene070952 | 0.80933 | 2.00E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene070952 | 0.823153 | 1.61E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070952.t1 | MTR_1g102980 | 96.514 | 459 | 12 | 3 | 1 | 458 | 1 | 456 | 0.0 | 894 |
| MS.gene070952.t1 | MTR_1g102980 | 96.308 | 325 | 10 | 2 | 135 | 458 | 8 | 331 | 0.0 | 629 |
| MS.gene070952.t1 | MTR_1g041395 | 67.355 | 484 | 116 | 10 | 1 | 457 | 1 | 469 | 9.58e-166 | 475 |
| MS.gene070952.t1 | MTR_1g041395 | 67.562 | 484 | 114 | 10 | 1 | 457 | 1 | 468 | 1.24e-165 | 475 |
| MS.gene070952.t1 | MTR_1g041395 | 66.803 | 488 | 118 | 10 | 1 | 457 | 1 | 475 | 1.08e-163 | 470 |
| MS.gene070952.t1 | MTR_1g071450 | 62.284 | 464 | 144 | 10 | 20 | 456 | 24 | 483 | 2.27e-145 | 424 |
| MS.gene070952.t1 | MTR_7g095500 | 59.341 | 455 | 158 | 8 | 10 | 441 | 8 | 458 | 8.35e-137 | 406 |
| MS.gene070952.t1 | MTR_1g041395 | 74.336 | 339 | 73 | 4 | 132 | 457 | 1 | 338 | 2.37e-118 | 350 |
| MS.gene070952.t1 | MTR_3g110182 | 39.583 | 432 | 205 | 12 | 22 | 451 | 33 | 410 | 3.00e-64 | 213 |
| MS.gene070952.t1 | MTR_4g039910 | 47.860 | 257 | 102 | 5 | 161 | 407 | 99 | 333 | 1.58e-48 | 169 |
| MS.gene070952.t1 | MTR_3g110182 | 40.599 | 367 | 163 | 11 | 22 | 386 | 31 | 344 | 3.50e-47 | 167 |
| MS.gene070952.t1 | MTR_5g012870 | 38.851 | 296 | 139 | 8 | 163 | 446 | 113 | 378 | 1.60e-42 | 155 |
| MS.gene070952.t1 | MTR_4g019730 | 84.906 | 53 | 6 | 1 | 373 | 423 | 1 | 53 | 8.42e-23 | 93.6 |
| MS.gene070952.t1 | MTR_4g129510 | 33.562 | 292 | 151 | 9 | 163 | 449 | 118 | 371 | 1.82e-17 | 84.3 |
| MS.gene070952.t1 | MTR_4g129510 | 33.562 | 292 | 151 | 9 | 163 | 449 | 87 | 340 | 1.32e-16 | 81.3 |
| MS.gene070952.t1 | MTR_4g129510 | 39.806 | 206 | 90 | 5 | 163 | 364 | 118 | 293 | 1.46e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070952.t1 | AT3G22810 | 66.183 | 482 | 129 | 14 | 1 | 458 | 1 | 472 | 0.0 | 533 |
| MS.gene070952.t1 | AT4G14740 | 63.825 | 481 | 141 | 10 | 1 | 455 | 1 | 474 | 0.0 | 518 |
| MS.gene070952.t1 | AT4G14740 | 63.825 | 481 | 141 | 10 | 1 | 455 | 1 | 474 | 0.0 | 518 |
| MS.gene070952.t1 | AT5G43870 | 62.882 | 458 | 145 | 8 | 7 | 455 | 11 | 452 | 8.08e-164 | 470 |
| MS.gene070952.t1 | AT3G22810 | 65.937 | 411 | 106 | 14 | 1 | 387 | 1 | 401 | 1.15e-145 | 422 |
| MS.gene070952.t1 | AT4G14740 | 63.527 | 414 | 118 | 10 | 1 | 388 | 1 | 407 | 2.69e-144 | 419 |
| MS.gene070952.t1 | AT3G63300 | 59.959 | 492 | 144 | 17 | 10 | 456 | 7 | 490 | 6.07e-135 | 398 |
| MS.gene070952.t1 | AT3G22810 | 73.267 | 303 | 74 | 3 | 162 | 458 | 33 | 334 | 7.76e-135 | 392 |
| MS.gene070952.t1 | AT4G14740 | 74.000 | 300 | 71 | 2 | 162 | 455 | 37 | 335 | 6.08e-133 | 387 |
| MS.gene070952.t1 | AT5G43870 | 62.404 | 391 | 122 | 8 | 7 | 388 | 11 | 385 | 2.40e-125 | 369 |
| MS.gene070952.t1 | AT3G63300 | 67.213 | 305 | 94 | 5 | 155 | 456 | 31 | 332 | 8.68e-92 | 282 |
| MS.gene070952.t1 | AT4G32780 | 38.283 | 431 | 193 | 10 | 21 | 447 | 34 | 395 | 3.40e-46 | 165 |
| MS.gene070952.t1 | AT4G32780 | 38.283 | 431 | 193 | 10 | 21 | 447 | 53 | 414 | 5.67e-46 | 165 |
| MS.gene070952.t1 | AT5G47440 | 33.566 | 429 | 201 | 10 | 22 | 450 | 43 | 387 | 1.30e-43 | 158 |
| MS.gene070952.t1 | AT4G17350 | 41.695 | 295 | 135 | 8 | 163 | 446 | 115 | 383 | 1.79e-42 | 155 |
| MS.gene070952.t1 | AT4G16670 | 35.959 | 292 | 164 | 4 | 163 | 446 | 132 | 408 | 6.03e-39 | 146 |
| MS.gene070952.t1 | AT4G16670 | 39.485 | 233 | 119 | 3 | 163 | 387 | 132 | 350 | 1.74e-31 | 124 |
| MS.gene070952.t1 | AT4G16670 | 39.535 | 215 | 108 | 3 | 163 | 369 | 132 | 332 | 3.18e-26 | 110 |
| MS.gene070952.t1 | AT5G57770 | 38.655 | 238 | 118 | 5 | 163 | 396 | 128 | 341 | 1.73e-22 | 99.4 |
| MS.gene070952.t1 | AT5G57770 | 38.222 | 225 | 112 | 4 | 163 | 384 | 128 | 328 | 1.64e-21 | 95.9 |
| MS.gene070952.t1 | AT4G32780 | 35.385 | 260 | 117 | 6 | 21 | 277 | 53 | 264 | 4.47e-12 | 66.6 |
Find 132 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGTGCTTGTGGTGTTTC+TGG | 0.157684 | 1.4:+79635610 | None:intergenic |
| GCAGCCACCGCCGCTTCGTC+TGG | 0.211127 | 1.4:-79634339 | MS.gene070952:CDS |
| ATAAAGCTCAAACCCATTTC+TGG | 0.227451 | 1.4:-79635669 | MS.gene070952:CDS |
| TCAGAGGAAGCAAAGGAAAA+TGG | 0.240625 | 1.4:+79635433 | None:intergenic |
| TCTTCTATGGTGGTGTTTAT+AGG | 0.252498 | 1.4:+79635508 | None:intergenic |
| TGTAAGCTTAAATAGTTATC+TGG | 0.254925 | 1.4:-79634517 | MS.gene070952:CDS |
| GCTCACCGCTGAAGCTACTA+TGG | 0.269009 | 1.4:+79633850 | None:intergenic |
| AGCAAAGGAAAATGGGTTTA+AGG | 0.281335 | 1.4:+79635441 | None:intergenic |
| TCTGTGTCTCCAAGAACTTC+AGG | 0.287973 | 1.4:-79635246 | MS.gene070952:CDS |
| AGAAGAAGAGGAGAGAGTTT+TGG | 0.301084 | 1.4:+79635543 | None:intergenic |
| TCTATTTCTGTTGTTCTTCT+CGG | 0.313221 | 1.4:+79632691 | None:intergenic |
| ATTCCTGTGGAGAGAAGTTT+GGG | 0.323759 | 1.4:-79633903 | MS.gene070952:CDS |
| ACAGGACAACTATCTGTTAA+AGG | 0.327867 | 1.4:+79635201 | None:intergenic |
| GGATAGAAAGGAGAAGAAAA+AGG | 0.331067 | 1.4:-79634442 | MS.gene070952:CDS |
| TGGAGTTTCTCTCACGTTCA+TGG | 0.340417 | 1.4:-79635588 | MS.gene070952:CDS |
| TGAAACCACTCAAATGATAA+TGG | 0.341964 | 1.4:-79635413 | MS.gene070952:CDS |
| CGAGGGCATTGAAGGAAGTT+TGG | 0.344004 | 1.4:-79633941 | MS.gene070952:CDS |
| GAGAGTCTCCCTGAAGTTCT+TGG | 0.351457 | 1.4:+79635237 | None:intergenic |
| GATTCCTGTGGAGAGAAGTT+TGG | 0.362060 | 1.4:-79633904 | MS.gene070952:CDS |
| GGTGGTGTTTATAGGAGGTT+TGG | 0.369428 | 1.4:+79635516 | None:intergenic |
| AGCGAATAGTGACTCGGCTT+TGG | 0.378325 | 1.4:-79634295 | MS.gene070952:CDS |
| CAGAGGAAGCAAAGGAAAAT+GGG | 0.383629 | 1.4:+79635434 | None:intergenic |
| GTGGGTCGGGTCTCCAGAAA+TGG | 0.392955 | 1.4:+79635656 | None:intergenic |
| GTTGAGACTGCAGAGGCGTT+GGG | 0.398723 | 1.4:-79634240 | MS.gene070952:CDS |
| GGCAGACCACCTGGTGGTGG+TGG | 0.399889 | 1.4:-79634492 | MS.gene070952:CDS |
| AGATGAGGAGGTTTCTTCTT+CGG | 0.403807 | 1.4:+79635468 | None:intergenic |
| ACCGCCGCTTCGTCTGGGTC+TGG | 0.406896 | 1.4:-79634333 | MS.gene070952:CDS |
| TTAACTGCTGCTGCTGCAAC+AGG | 0.412989 | 1.4:-79634144 | MS.gene070952:intron |
| CAGATACCGCAGCATGAACC+TGG | 0.413528 | 1.4:+79634397 | None:intergenic |
| AGACCACCTGGTGGTGGTGG+TGG | 0.418708 | 1.4:-79634489 | MS.gene070952:CDS |
| AGCATGAACCTGGGCATTGT+GGG | 0.420669 | 1.4:+79634407 | None:intergenic |
| TCGATTTCAGATGGTGAAAC+AGG | 0.421017 | 1.4:+79635183 | None:intergenic |
| TTGGACGGGACGCCATTTGC+TGG | 0.425146 | 1.4:-79632843 | MS.gene070952:CDS |
| ATGAAGAGTAGGCACGTTGC+TGG | 0.426396 | 1.4:-79633075 | MS.gene070952:CDS |
| TTTGTGCAGGTGATCTTCAC+TGG | 0.428772 | 1.4:-79633379 | MS.gene070952:intron |
| ATTGAAAGCGAGGGCATTGA+AGG | 0.436129 | 1.4:-79633949 | MS.gene070952:CDS |
| CAGCCACCGCCGCTTCGTCT+GGG | 0.436691 | 1.4:-79634338 | MS.gene070952:CDS |
| GGCTTCTGCAGCAACGTTGG+TGG | 0.436826 | 1.4:-79634274 | MS.gene070952:CDS |
| ATATATAAACAAAATGAATC+AGG | 0.440520 | 1.4:-79633342 | MS.gene070952:intron |
| CTTCAGAAGTTCACAACCTC+TGG | 0.443601 | 1.4:+79633776 | None:intergenic |
| GGTTTCTTCTTCGGTTTCTC+CGG | 0.446422 | 1.4:+79635477 | None:intergenic |
| GGTGGCAGACCACCTGGTGG+TGG | 0.447164 | 1.4:-79634495 | MS.gene070952:CDS |
| TGTACCTGAAGATAATTTCT+CGG | 0.455360 | 1.4:-79633826 | MS.gene070952:CDS |
| ATGGAAGAGTGAAGTGGGTC+GGG | 0.467808 | 1.4:+79635643 | None:intergenic |
| GGTGAGAATCGTCGCTACTT+TGG | 0.470784 | 1.4:-79632815 | MS.gene070952:CDS |
| GACGGTTGGAAGATGGCTTA+AGG | 0.476572 | 1.4:-79634463 | MS.gene070952:CDS |
| GCCGTGAATGTTAGATCTGC+TGG | 0.478252 | 1.4:-79634180 | MS.gene070952:CDS |
| TCTCACCGCCTTCCAGCAAA+TGG | 0.482869 | 1.4:+79632831 | None:intergenic |
| CTGTGTCTCCAAGAACTTCA+GGG | 0.484560 | 1.4:-79635245 | MS.gene070952:CDS |
| CAAAGATATGCCCGCTTGGA+CGG | 0.486154 | 1.4:-79632858 | MS.gene070952:CDS |
| AGACCCAGACGAAGCGGCGG+TGG | 0.489654 | 1.4:+79634335 | None:intergenic |
| TTTGGCTTCTGCAGCAACGT+TGG | 0.493716 | 1.4:-79634277 | MS.gene070952:CDS |
| AAGATGGCTTAAGGATAGAA+AGG | 0.499120 | 1.4:-79634454 | MS.gene070952:CDS |
| TGTTGAGACTGCAGAGGCGT+TGG | 0.500590 | 1.4:-79634241 | MS.gene070952:CDS |
| TCTTCCCTGCAGTACGGCCG+TGG | 0.502954 | 1.4:-79634552 | MS.gene070952:intron |
| CAGCATGAACCTGGGCATTG+TGG | 0.503265 | 1.4:+79634406 | None:intergenic |
| AAAGATATGCCCGCTTGGAC+GGG | 0.506528 | 1.4:-79632857 | MS.gene070952:CDS |
| AGGTTTGGAAGAAGAAGAAG+AGG | 0.509796 | 1.4:+79635531 | None:intergenic |
| TTCTGCAGCAACGTTGGTGG+CGG | 0.514743 | 1.4:-79634271 | MS.gene070952:CDS |
| GTTGTTCTTCTCGGCTGCAA+TGG | 0.515717 | 1.4:+79632700 | None:intergenic |
| GTGGTAAGACGGTTGGAAGA+TGG | 0.518581 | 1.4:-79634470 | MS.gene070952:CDS |
| GGTGGTGGTGGTAAGACGGT+TGG | 0.518939 | 1.4:-79634477 | MS.gene070952:CDS |
| GCTTCTGGTGGTAATGGTAA+TGG | 0.519867 | 1.4:-79633879 | MS.gene070952:CDS |
| TCTCGGCTGCAATGGAAAGC+AGG | 0.520517 | 1.4:+79632708 | None:intergenic |
| GTACCTGAAGATAATTTCTC+GGG | 0.522129 | 1.4:-79633825 | MS.gene070952:CDS |
| TATCTGGGTGGCAGACCACC+TGG | 0.524730 | 1.4:-79634501 | MS.gene070952:CDS |
| GTACCCGAGAAATTATCTTC+AGG | 0.529680 | 1.4:+79633822 | None:intergenic |
| CGGAACATGGAAGAGTGAAG+TGG | 0.533073 | 1.4:+79635637 | None:intergenic |
| ACGGGACGCCATTTGCTGGA+AGG | 0.535811 | 1.4:-79632839 | MS.gene070952:CDS |
| TCTATGGTGGTGTTTATAGG+AGG | 0.537077 | 1.4:+79635511 | None:intergenic |
| TTACACCGCCGTTGTTTCCA+CGG | 0.537355 | 1.4:+79634535 | None:intergenic |
| TGTTTCTGGTGGACGGAACA+TGG | 0.537758 | 1.4:+79635624 | None:intergenic |
| GTAAGCTTAAATAGTTATCT+GGG | 0.538154 | 1.4:-79634516 | MS.gene070952:CDS |
| ACGGGAACACCTTGCTGCGG+TGG | 0.539252 | 1.4:-79634211 | MS.gene070952:CDS |
| TGAAGAGTAGGCACGTTGCT+GGG | 0.541029 | 1.4:-79633074 | MS.gene070952:CDS |
| ATCTGAAATCGACGATATCA+AGG | 0.541670 | 1.4:-79635172 | MS.gene070952:intron |
| TGGGTCGGGTCTCCAGAAAT+GGG | 0.543717 | 1.4:+79635657 | None:intergenic |
| AGCAAGGGCCCACAATGCCC+AGG | 0.543868 | 1.4:-79634415 | MS.gene070952:CDS |
| AAATGGCGTCCCGTCCAAGC+GGG | 0.545545 | 1.4:+79632848 | None:intergenic |
| CTTGTGGTGTTTCTGGTGGA+CGG | 0.553644 | 1.4:+79635617 | None:intergenic |
| GCGTTCCATTATCATTTGAG+TGG | 0.554237 | 1.4:+79635408 | None:intergenic |
| AGAAACACCACAAGCACCAA+TGG | 0.558033 | 1.4:-79635608 | MS.gene070952:CDS |
| AGAGTATGATGTGTGGACTC+AGG | 0.560327 | 1.4:-79632741 | MS.gene070952:CDS |
| GTGTTGTTGTAGCTTTGCGT+GGG | 0.562118 | 1.4:-79633980 | MS.gene070952:intron |
| TGATCAAAGATATGCCCGCT+TGG | 0.565703 | 1.4:-79632862 | MS.gene070952:CDS |
| CTTCTGAAGCGCACACGCAA+AGG | 0.567901 | 1.4:-79633762 | MS.gene070952:intron |
| TTGATATCGTCGATTTCAGA+TGG | 0.568899 | 1.4:+79635174 | None:intergenic |
| CATGGAAGAGTGAAGTGGGT+CGG | 0.569299 | 1.4:+79635642 | None:intergenic |
| AGAAACTCCATTGGTGCTTG+TGG | 0.572480 | 1.4:+79635601 | None:intergenic |
| TGCAGCAATTGCAGCTACTG+CGG | 0.572535 | 1.4:+79634359 | None:intergenic |
| TTGAGACTGCAGAGGCGTTG+GGG | 0.573228 | 1.4:-79634239 | MS.gene070952:CDS |
| AGTGGTTTCAGAGGAAGCAA+AGG | 0.575283 | 1.4:+79635426 | None:intergenic |
| TCCTGTGGAGAGAAGTTTGG+GGG | 0.582754 | 1.4:-79633901 | MS.gene070952:CDS |
| GTTTAAGGAAACAGATGAGG+AGG | 0.587336 | 1.4:+79635456 | None:intergenic |
| ACCAGCAGATCTAACATTCA+CGG | 0.590450 | 1.4:+79634179 | None:intergenic |
| GGTGCTTGTGGTGTTTCTGG+TGG | 0.594073 | 1.4:+79635613 | None:intergenic |
| GGGCTGCAACATTGAAAGCG+AGG | 0.600321 | 1.4:-79633959 | MS.gene070952:CDS |
| TGTGTTGTTGTAGCTTTGCG+TGG | 0.600647 | 1.4:-79633981 | MS.gene070952:intron |
| TCCAGACCCAGACGAAGCGG+CGG | 0.601265 | 1.4:+79634332 | None:intergenic |
| TATCATTTGAGTGGTTTCAG+AGG | 0.602274 | 1.4:+79635417 | None:intergenic |
| AGCAATTGCAGCTACTGCGG+CGG | 0.603464 | 1.4:+79634362 | None:intergenic |
| TGAGACTGCAGAGGCGTTGG+GGG | 0.605085 | 1.4:-79634238 | MS.gene070952:CDS |
| GAGTATGATGTGTGGACTCA+GGG | 0.611655 | 1.4:-79632740 | MS.gene070952:CDS |
| GGTTCATGCTGCGGTATCTG+TGG | 0.615364 | 1.4:-79634394 | MS.gene070952:CDS |
| CTCACCGCTGAAGCTACTAT+GGG | 0.618283 | 1.4:+79633851 | None:intergenic |
| ACCATAGAAGAAAACATCAC+CGG | 0.620032 | 1.4:-79635496 | MS.gene070952:CDS |
| CAGTACGGCCGTGGAAACAA+CGG | 0.622108 | 1.4:-79634543 | MS.gene070952:CDS |
| GAACGTGAGAGAAACTCCAT+TGG | 0.627617 | 1.4:+79635592 | None:intergenic |
| GGCTGCAACATTGAAAGCGA+GGG | 0.631800 | 1.4:-79633958 | MS.gene070952:CDS |
| CAATGCCCAGGTTCATGCTG+CGG | 0.633356 | 1.4:-79634403 | MS.gene070952:CDS |
| GGAACATGGAAGAGTGAAGT+GGG | 0.633559 | 1.4:+79635638 | None:intergenic |
| AGTAGAGAATTACTTGCCAG+AGG | 0.643361 | 1.4:-79633792 | MS.gene070952:CDS |
| GGGAGACTCTCACACAGTAG+TGG | 0.643580 | 1.4:-79635225 | MS.gene070952:CDS |
| GGACGCCATTTGCTGGAAGG+CGG | 0.651970 | 1.4:-79632836 | MS.gene070952:CDS |
| TGGGTTTAAGGAAACAGATG+AGG | 0.652226 | 1.4:+79635453 | None:intergenic |
| GGAACGGGAACACCTTGCTG+CGG | 0.652259 | 1.4:-79634214 | MS.gene070952:CDS |
| TTCCTGTGGAGAGAAGTTTG+GGG | 0.655019 | 1.4:-79633902 | MS.gene070952:CDS |
| CGGAGTTAACCACCGCAGCA+AGG | 0.656849 | 1.4:+79634202 | None:intergenic |
| GTCTGGGTCTGGAAAAGACG+AGG | 0.656862 | 1.4:-79634322 | MS.gene070952:CDS |
| CAAATGGCGTCCCGTCCAAG+CGG | 0.661319 | 1.4:+79632847 | None:intergenic |
| AGATACCGCAGCATGAACCT+GGG | 0.662936 | 1.4:+79634398 | None:intergenic |
| AGTTCCCATAGTAGCTTCAG+CGG | 0.663806 | 1.4:-79633855 | MS.gene070952:CDS |
| CTGGGTGGCAGACCACCTGG+TGG | 0.677295 | 1.4:-79634498 | MS.gene070952:CDS |
| TATTGCAGCAGTGATTCCTG+TGG | 0.684636 | 1.4:-79633916 | MS.gene070952:CDS |
| AGCTTAAATAGTTATCTGGG+TGG | 0.684648 | 1.4:-79634513 | MS.gene070952:CDS |
| GGAGAAAGCGAATAGTGACT+CGG | 0.696370 | 1.4:-79634301 | MS.gene070952:CDS |
| TGTTGTTGTAGCTTTGCGTG+GGG | 0.698828 | 1.4:-79633979 | MS.gene070952:intron |
| TCAGTGTGTTGAGACTGCAG+AGG | 0.701979 | 1.4:-79634247 | MS.gene070952:CDS |
| ATCAAAGAGAGTATGATGTG+TGG | 0.717389 | 1.4:-79632748 | MS.gene070952:CDS |
| GGATTGAAAACATTATTGCG+TGG | 0.721694 | 1.4:-79632794 | MS.gene070952:CDS |
| TACGGCCGTGGAAACAACGG+CGG | 0.736881 | 1.4:-79634540 | MS.gene070952:CDS |
| AGCAGATCTAACATTCACGG+CGG | 0.776495 | 1.4:+79634182 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATAATTAATTTAAT+GGG | + | chr1.4:79633320-79633339 | None:intergenic | 0.0% |
| !! | TAAATTAATAATTAATTTAA+TGG | + | chr1.4:79633321-79633340 | None:intergenic | 0.0% |
| !! | TATTAATTAGTAATTTACAT+TGG | + | chr1.4:79633270-79633289 | None:intergenic | 10.0% |
| !!! | AATTTAATGTAAATTTTTAG+AGG | - | chr1.4:79634704-79634723 | MS.gene070952:intron | 10.0% |
| !!! | TAATTTTTTTTTTGTTTTGT+AGG | - | chr1.4:79633081-79633100 | MS.gene070952:CDS | 10.0% |
| !!! | TTTTTTTTTGTTGTAATAAA+TGG | + | chr1.4:79634884-79634903 | None:intergenic | 10.0% |
| !! | ATATATAAACAAAATGAATC+AGG | - | chr1.4:79635016-79635035 | MS.gene070952:intron | 15.0% |
| !! | ATGATAAAAACAAAATTTCA+AGG | - | chr1.4:79634255-79634274 | MS.gene070952:CDS | 15.0% |
| !! | TAATTATTTAACAACAGATT+TGG | - | chr1.4:79635367-79635386 | MS.gene070952:intron | 15.0% |
| !! | TTTGTTCAAATTAATTACAA+AGG | - | chr1.4:79633644-79633663 | MS.gene070952:intron | 15.0% |
| !!! | AAGGAATTTTTATTGAATAA+TGG | - | chr1.4:79633720-79633739 | MS.gene070952:intron | 15.0% |
| !!! | ATGAAATATTTTCATGTAAA+TGG | - | chr1.4:79634652-79634671 | MS.gene070952:intron | 15.0% |
| !! | AATCAGTCACTTAATTATTT+GGG | - | chr1.4:79635100-79635119 | MS.gene070952:intron | 20.0% |
| !! | ACAAAGTTTACTAAAAATAG+TGG | + | chr1.4:79633406-79633425 | None:intergenic | 20.0% |
| !! | ATGAAAAAGTTATATGAAGT+GGG | - | chr1.4:79635159-79635178 | MS.gene070952:intron | 20.0% |
| !! | CAAAGTTTACTAAAAATAGT+GGG | + | chr1.4:79633405-79633424 | None:intergenic | 20.0% |
| !! | CTGTAAATTCAAAACATAAA+GGG | + | chr1.4:79635461-79635480 | None:intergenic | 20.0% |
| !! | TAATCAGTCACTTAATTATT+TGG | - | chr1.4:79635099-79635118 | MS.gene070952:intron | 20.0% |
| !! | TAATTAGTAATTTACATTGG+AGG | + | chr1.4:79633267-79633286 | None:intergenic | 20.0% |
| !! | TATATTTCTTATTGTGTGTT+TGG | - | chr1.4:79634619-79634638 | MS.gene070952:intron | 20.0% |
| !! | TCTGTAAATTCAAAACATAA+AGG | + | chr1.4:79635462-79635481 | None:intergenic | 20.0% |
| !! | TTTGAAAATTCTTTATGTGA+AGG | - | chr1.4:79635249-79635268 | MS.gene070952:CDS | 20.0% |
| !!! | ACTCTTTTTCTTTTTCTTAA+TGG | + | chr1.4:79635311-79635330 | None:intergenic | 20.0% |
| !!! | ATAAAAGCACAATATTGTTA+AGG | + | chr1.4:79635062-79635081 | None:intergenic | 20.0% |
| !!! | TGTAATTTAGGACAAATTTT+GGG | + | chr1.4:79633526-79633545 | None:intergenic | 20.0% |
| !!! | TTCACATAAAGAATTTTCAA+AGG | + | chr1.4:79635250-79635269 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGTTTTGTAGG+AGG | - | chr1.4:79633084-79633103 | MS.gene070952:CDS | 20.0% |
| ! | AAAATTGTACGCTGTAATTT+AGG | + | chr1.4:79633538-79633557 | None:intergenic | 25.0% |
| ! | AACATCATAAGACTAGAAAA+TGG | + | chr1.4:79634927-79634946 | None:intergenic | 25.0% |
| ! | AATTCAAAACATAAAGGGAA+TGG | + | chr1.4:79635456-79635475 | None:intergenic | 25.0% |
| ! | ACCTTAAAGCTAATCAATTA+TGG | - | chr1.4:79634744-79634763 | MS.gene070952:intron | 25.0% |
| ! | ACGAAAAGAATAAATCATTG+TGG | + | chr1.4:79633618-79633637 | None:intergenic | 25.0% |
| ! | ATAAGACTAGAAAATGGAAA+GGG | + | chr1.4:79634921-79634940 | None:intergenic | 25.0% |
| ! | ATCCGAAGAAGAAAAAAAAA+AGG | + | chr1.4:79633029-79633048 | None:intergenic | 25.0% |
| ! | CATGAAAAAGTTATATGAAG+TGG | - | chr1.4:79635158-79635177 | MS.gene070952:intron | 25.0% |
| ! | GTAAGCTTAAATAGTTATCT+GGG | - | chr1.4:79633842-79633861 | MS.gene070952:CDS | 25.0% |
| ! | TGAAAAAGTTATATGAAGTG+GGG | - | chr1.4:79635160-79635179 | MS.gene070952:intron | 25.0% |
| ! | TGATTCTTAAGACTTGATAT+TGG | + | chr1.4:79634811-79634830 | None:intergenic | 25.0% |
| ! | TGTAAGCTTAAATAGTTATC+TGG | - | chr1.4:79633841-79633860 | MS.gene070952:CDS | 25.0% |
| ! | TTAAAGCTAATCAATTATGG+AGG | - | chr1.4:79634747-79634766 | MS.gene070952:intron | 25.0% |
| ! | TTATTTAACAACAGATTTGG+AGG | - | chr1.4:79635370-79635389 | MS.gene070952:intron | 25.0% |
| ! | TTCAATAAAAATTCCTTCCT+TGG | + | chr1.4:79633717-79633736 | None:intergenic | 25.0% |
| !! | AGTTTGTATGTTGATGTTTT+TGG | - | chr1.4:79634326-79634345 | MS.gene070952:CDS | 25.0% |
| !! | TTACTCTAAAAATGAAGAGT+AGG | - | chr1.4:79635272-79635291 | MS.gene070952:intron | 25.0% |
| !!! | ATATTGGTTTTAGTGTTTGA+TGG | + | chr1.4:79634795-79634814 | None:intergenic | 25.0% |
| !!! | ATGTATTTGTTTTGTTTACC+TGG | - | chr1.4:79633456-79633475 | MS.gene070952:intron | 25.0% |
| !!! | ATGTTTTGAATTTACAGATG+TGG | - | chr1.4:79635464-79635483 | MS.gene070952:CDS | 25.0% |
| !!! | CACCTTTTTTTTTTCTTCTT+CGG | - | chr1.4:79633024-79633043 | MS.gene070952:intron | 25.0% |
| !!! | CATTTTCTGAAAATGTGAAT+TGG | - | chr1.4:79634284-79634303 | MS.gene070952:CDS | 25.0% |
| !!! | CTGTAATTTAGGACAAATTT+TGG | + | chr1.4:79633527-79633546 | None:intergenic | 25.0% |
| !!! | TAATTGATTAGCTTTAAGGT+AGG | + | chr1.4:79634744-79634763 | None:intergenic | 25.0% |
| !!! | TCCATAATTGATTAGCTTTA+AGG | + | chr1.4:79634748-79634767 | None:intergenic | 25.0% |
| !!! | TTTTGTTCTTGTTATGAACA+AGG | - | chr1.4:79633679-79633698 | MS.gene070952:intron | 25.0% |
| !!! | TTTTTGTTGTAATAAATGGC+AGG | + | chr1.4:79634880-79634899 | None:intergenic | 25.0% |
| CATAAGACTAGAAAATGGAA+AGG | + | chr1.4:79634922-79634941 | None:intergenic | 30.0% | |
| CTAACAGAAAATCGTCAAAT+TGG | - | chr1.4:79633489-79633508 | MS.gene070952:intron | 30.0% | |
| GAAAAAGTTATATGAAGTGG+GGG | - | chr1.4:79635161-79635180 | MS.gene070952:intron | 30.0% | |
| GAATAAATCATTGTGGCATA+AGG | + | chr1.4:79633611-79633630 | None:intergenic | 30.0% | |
| GACTGATTATTGAGTACTAA+AGG | + | chr1.4:79635088-79635107 | None:intergenic | 30.0% | |
| TGAAACCACTCAAATGATAA+TGG | - | chr1.4:79632945-79632964 | MS.gene070952:intron | 30.0% | |
| TGTACCTGAAGATAATTTCT+CGG | - | chr1.4:79634532-79634551 | MS.gene070952:CDS | 30.0% | |
| TTATTGTGTGTTTGGTTGTA+TGG | - | chr1.4:79634627-79634646 | MS.gene070952:intron | 30.0% | |
| TTCCATTTAAGGATTTGTGA+GGG | - | chr1.4:79635402-79635421 | MS.gene070952:CDS | 30.0% | |
| ! | ACGATTTTCTGTTAGATTGT+AGG | + | chr1.4:79633484-79633503 | None:intergenic | 30.0% |
| ! | CGATTTTCTGTTAGATTGTA+GGG | + | chr1.4:79633483-79633502 | None:intergenic | 30.0% |
| !! | AATTTAGGACAAATTTTGGG+TGG | + | chr1.4:79633523-79633542 | None:intergenic | 30.0% |
| !! | TCTATTTCTGTTGTTCTTCT+CGG | + | chr1.4:79635670-79635689 | None:intergenic | 30.0% |
| AAGATGGCTTAAGGATAGAA+AGG | - | chr1.4:79633904-79633923 | MS.gene070952:CDS | 35.0% | |
| ACAGGACAACTATCTGTTAA+AGG | + | chr1.4:79633160-79633179 | None:intergenic | 35.0% | |
| ACCATAGAAGAAAACATCAC+CGG | - | chr1.4:79632862-79632881 | MS.gene070952:CDS | 35.0% | |
| AGAAGAAAAAGGAAGAAGCA+AGG | - | chr1.4:79633927-79633946 | MS.gene070952:CDS | 35.0% | |
| AGCTTAAATAGTTATCTGGG+TGG | - | chr1.4:79633845-79633864 | MS.gene070952:CDS | 35.0% | |
| ATAAAGCTCAAACCCATTTC+TGG | - | chr1.4:79632689-79632708 | MS.gene070952:CDS | 35.0% | |
| CAAGGAATAGAAACAAACCA+AGG | - | chr1.4:79633697-79633716 | MS.gene070952:intron | 35.0% | |
| CATTCGCCTTATCATACTAA+AGG | + | chr1.4:79635189-79635208 | None:intergenic | 35.0% | |
| GAAGAAAAAGGAAGAAGCAA+GGG | - | chr1.4:79633928-79633947 | MS.gene070952:CDS | 35.0% | |
| GAATAGAAACAAACCAAGGA+AGG | - | chr1.4:79633701-79633720 | MS.gene070952:intron | 35.0% | |
| GGATAGAAAGGAGAAGAAAA+AGG | - | chr1.4:79633916-79633935 | MS.gene070952:CDS | 35.0% | |
| GGATTGAAAACATTATTGCG+TGG | - | chr1.4:79635564-79635583 | MS.gene070952:CDS | 35.0% | |
| GTACCTGAAGATAATTTCTC+GGG | - | chr1.4:79634533-79634552 | MS.gene070952:CDS | 35.0% | |
| GTATTGTAACCCCAAAAACA+TGG | - | chr1.4:79633772-79633791 | MS.gene070952:CDS | 35.0% | |
| GTTCCATTTAAGGATTTGTG+AGG | - | chr1.4:79635401-79635420 | MS.gene070952:CDS | 35.0% | |
| TATCATTTGAGTGGTTTCAG+AGG | + | chr1.4:79632944-79632963 | None:intergenic | 35.0% | |
| TATGCATGTTGTGTTGTAGA+AGG | + | chr1.4:79632997-79633016 | None:intergenic | 35.0% | |
| TCCATTTAAGGATTTGTGAG+GGG | - | chr1.4:79635403-79635422 | MS.gene070952:CDS | 35.0% | |
| TTAACAACAGATTTGGAGGT+GGG | - | chr1.4:79635374-79635393 | MS.gene070952:intron | 35.0% | |
| TTGTGTTGTAGAAGGACTTA+CGG | + | chr1.4:79632989-79633008 | None:intergenic | 35.0% | |
| TTTAACAACAGATTTGGAGG+TGG | - | chr1.4:79635373-79635392 | MS.gene070952:intron | 35.0% | |
| ! | AGCAAAGGAAAATGGGTTTA+AGG | + | chr1.4:79632920-79632939 | None:intergenic | 35.0% |
| ! | ATCAAAGAGAGTATGATGTG+TGG | - | chr1.4:79635610-79635629 | MS.gene070952:CDS | 35.0% |
| ! | ATCTGAAATCGACGATATCA+AGG | - | chr1.4:79633186-79633205 | MS.gene070952:intron | 35.0% |
| ! | ATGCATAGAAGCCATGTTTT+TGG | + | chr1.4:79633786-79633805 | None:intergenic | 35.0% |
| ! | TCTTCTATGGTGGTGTTTAT+AGG | + | chr1.4:79632853-79632872 | None:intergenic | 35.0% |
| ! | TGCATAGAAGCCATGTTTTT+GGG | + | chr1.4:79633785-79633804 | None:intergenic | 35.0% |
| !! | TTGATATCGTCGATTTCAGA+TGG | + | chr1.4:79633187-79633206 | None:intergenic | 35.0% |
| !!! | TATGTTGATGTTTTTGGCGT+CGG | - | chr1.4:79634332-79634351 | MS.gene070952:CDS | 35.0% |
| ACCAGCAGATCTAACATTCA+CGG | + | chr1.4:79634182-79634201 | None:intergenic | 40.0% | |
| AGATGAGGAGGTTTCTTCTT+CGG | + | chr1.4:79632893-79632912 | None:intergenic | 40.0% | |
| AGGTTTGGAAGAAGAAGAAG+AGG | + | chr1.4:79632830-79632849 | None:intergenic | 40.0% | |
| AGTAGAGAATTACTTGCCAG+AGG | - | chr1.4:79634566-79634585 | MS.gene070952:intron | 40.0% | |
| ATTCCTGTGGAGAGAAGTTT+GGG | - | chr1.4:79634455-79634474 | MS.gene070952:CDS | 40.0% | |
| ATTGAATCCAAACACGCACT+TGG | - | chr1.4:79634848-79634867 | MS.gene070952:intron | 40.0% | |
| CAACCATTAATGCAGAGAGA+GGG | + | chr1.4:79633569-79633588 | None:intergenic | 40.0% | |
| CAGAGGAAGCAAAGGAAAAT+GGG | + | chr1.4:79632927-79632946 | None:intergenic | 40.0% | |
| GCGTTCCATTATCATTTGAG+TGG | + | chr1.4:79632953-79632972 | None:intergenic | 40.0% | |
| GTAAAATCCAAGTGCGTGTT+TGG | + | chr1.4:79634858-79634877 | None:intergenic | 40.0% | |
| GTACCCGAGAAATTATCTTC+AGG | + | chr1.4:79634539-79634558 | None:intergenic | 40.0% | |
| GTTGAAGATTGTGCAGATGA+AGG | - | chr1.4:79633585-79633604 | MS.gene070952:intron | 40.0% | |
| GTTTAAGGAAACAGATGAGG+AGG | + | chr1.4:79632905-79632924 | None:intergenic | 40.0% | |
| TATCCCTCTCTCTGCATTAA+TGG | - | chr1.4:79633563-79633582 | MS.gene070952:intron | 40.0% | |
| TCAACCATTAATGCAGAGAG+AGG | + | chr1.4:79633570-79633589 | None:intergenic | 40.0% | |
| TCAGAGGAAGCAAAGGAAAA+TGG | + | chr1.4:79632928-79632947 | None:intergenic | 40.0% | |
| TCGATTTCAGATGGTGAAAC+AGG | + | chr1.4:79633178-79633197 | None:intergenic | 40.0% | |
| TGGGTTTAAGGAAACAGATG+AGG | + | chr1.4:79632908-79632927 | None:intergenic | 40.0% | |
| ! | AGAAGAAGAGGAGAGAGTTT+TGG | + | chr1.4:79632818-79632837 | None:intergenic | 40.0% |
| ! | GGTGATGTTTTCTTCTATGG+TGG | + | chr1.4:79632863-79632882 | None:intergenic | 40.0% |
| ! | TCCGGTGATGTTTTCTTCTA+TGG | + | chr1.4:79632866-79632885 | None:intergenic | 40.0% |
| ! | TCTATGGTGGTGTTTATAGG+AGG | + | chr1.4:79632850-79632869 | None:intergenic | 40.0% |
| !! | GCATAGAAGCCATGTTTTTG+GGG | + | chr1.4:79633784-79633803 | None:intergenic | 40.0% |
| !! | TTGATTCCTGAGTTTTGTGC+AGG | - | chr1.4:79634966-79634985 | MS.gene070952:intron | 40.0% |
| AGAAACACCACAAGCACCAA+TGG | - | chr1.4:79632750-79632769 | MS.gene070952:CDS | 45.0% | |
| AGAGTATGATGTGTGGACTC+AGG | - | chr1.4:79635617-79635636 | MS.gene070952:CDS | 45.0% | |
| AGATCACCTGCACAAAACTC+AGG | + | chr1.4:79634975-79634994 | None:intergenic | 45.0% | |
| AGCAGATCTAACATTCACGG+CGG | + | chr1.4:79634179-79634198 | None:intergenic | 45.0% | |
| AGTGGTTTCAGAGGAAGCAA+AGG | + | chr1.4:79632935-79632954 | None:intergenic | 45.0% | |
| AGTTCCCATAGTAGCTTCAG+CGG | - | chr1.4:79634503-79634522 | MS.gene070952:CDS | 45.0% | |
| ATGCATTCTTCCCTGCAGTA+CGG | - | chr1.4:79633800-79633819 | MS.gene070952:CDS | 45.0% | |
| CTGTGTCTCCAAGAACTTCA+GGG | - | chr1.4:79633113-79633132 | MS.gene070952:intron | 45.0% | |
| CTTCAGAAGTTCACAACCTC+TGG | + | chr1.4:79634585-79634604 | None:intergenic | 45.0% | |
| GAACGTGAGAGAAACTCCAT+TGG | + | chr1.4:79632769-79632788 | None:intergenic | 45.0% | |
| GAGTATGATGTGTGGACTCA+GGG | - | chr1.4:79635618-79635637 | MS.gene070952:CDS | 45.0% | |
| GATTCCTGTGGAGAGAAGTT+TGG | - | chr1.4:79634454-79634473 | MS.gene070952:CDS | 45.0% | |
| GCCCCTCACAAATCCTTAAA+TGG | + | chr1.4:79635407-79635426 | None:intergenic | 45.0% | |
| GGAACATGGAAGAGTGAAGT+GGG | + | chr1.4:79632723-79632742 | None:intergenic | 45.0% | |
| GGAGAAAGCGAATAGTGACT+CGG | - | chr1.4:79634057-79634076 | MS.gene070952:intron | 45.0% | |
| GGTGGTGTTTATAGGAGGTT+TGG | + | chr1.4:79632845-79632864 | None:intergenic | 45.0% | |
| GGTTTCTTCTTCGGTTTCTC+CGG | + | chr1.4:79632884-79632903 | None:intergenic | 45.0% | |
| TATTGCAGCAGTGATTCCTG+TGG | - | chr1.4:79634442-79634461 | MS.gene070952:CDS | 45.0% | |
| TCTGTGTCTCCAAGAACTTC+AGG | - | chr1.4:79633112-79633131 | MS.gene070952:intron | 45.0% | |
| TCTGTTAGATTGTAGGGACC+AGG | + | chr1.4:79633477-79633496 | None:intergenic | 45.0% | |
| TGATCAAAGATATGCCCGCT+TGG | - | chr1.4:79635496-79635515 | MS.gene070952:CDS | 45.0% | |
| TGGAGTTTCTCTCACGTTCA+TGG | - | chr1.4:79632770-79632789 | MS.gene070952:CDS | 45.0% | |
| TGTGAGGGGCAAGATCAAAA+GGG | - | chr1.4:79635417-79635436 | MS.gene070952:CDS | 45.0% | |
| TTCCTGTGGAGAGAAGTTTG+GGG | - | chr1.4:79634456-79634475 | MS.gene070952:CDS | 45.0% | |
| TTGTGAGGGGCAAGATCAAA+AGG | - | chr1.4:79635416-79635435 | MS.gene070952:CDS | 45.0% | |
| TTTGTGCAGGTGATCTTCAC+TGG | - | chr1.4:79634979-79634998 | MS.gene070952:intron | 45.0% | |
| ! | AGAAACTCCATTGGTGCTTG+TGG | + | chr1.4:79632760-79632779 | None:intergenic | 45.0% |
| ! | ATTGGTGCTTGTGGTGTTTC+TGG | + | chr1.4:79632751-79632770 | None:intergenic | 45.0% |
| ! | GGGGCACCTTTAGTATGATA+AGG | - | chr1.4:79635180-79635199 | MS.gene070952:CDS | 45.0% |
| ! | GTGTTGTTGTAGCTTTGCGT+GGG | - | chr1.4:79634378-79634397 | MS.gene070952:CDS | 45.0% |
| ! | TGTGTTGTTGTAGCTTTGCG+TGG | - | chr1.4:79634377-79634396 | MS.gene070952:CDS | 45.0% |
| ! | TGTTGTTGTAGCTTTGCGTG+GGG | - | chr1.4:79634379-79634398 | MS.gene070952:CDS | 45.0% |
| !! | ATTGAAAGCGAGGGCATTGA+AGG | - | chr1.4:79634409-79634428 | MS.gene070952:CDS | 45.0% |
| !! | GCTTCTGGTGGTAATGGTAA+TGG | - | chr1.4:79634479-79634498 | MS.gene070952:CDS | 45.0% |
| !! | GGTGGGTCTTGTTCCATTTA+AGG | - | chr1.4:79635391-79635410 | MS.gene070952:intron | 45.0% |
| AAAGATATGCCCGCTTGGAC+GGG | - | chr1.4:79635501-79635520 | MS.gene070952:CDS | 50.0% | |
| AGATACCGCAGCATGAACCT+GGG | + | chr1.4:79633963-79633982 | None:intergenic | 50.0% | |
| ATGAAGAGTAGGCACGTTGC+TGG | - | chr1.4:79635283-79635302 | MS.gene070952:intron | 50.0% | |
| ATGGAAGAGTGAAGTGGGTC+GGG | + | chr1.4:79632718-79632737 | None:intergenic | 50.0% | |
| CAAAGATATGCCCGCTTGGA+CGG | - | chr1.4:79635500-79635519 | MS.gene070952:CDS | 50.0% | |
| CATGGAAGAGTGAAGTGGGT+CGG | + | chr1.4:79632719-79632738 | None:intergenic | 50.0% | |
| CGGAACATGGAAGAGTGAAG+TGG | + | chr1.4:79632724-79632743 | None:intergenic | 50.0% | |
| CTCACCGCTGAAGCTACTAT+GGG | + | chr1.4:79634510-79634529 | None:intergenic | 50.0% | |
| GACGGTTGGAAGATGGCTTA+AGG | - | chr1.4:79633895-79633914 | MS.gene070952:CDS | 50.0% | |
| GAGAGTCTCCCTGAAGTTCT+TGG | + | chr1.4:79633124-79633143 | None:intergenic | 50.0% | |
| GCCGTGAATGTTAGATCTGC+TGG | - | chr1.4:79634178-79634197 | MS.gene070952:CDS | 50.0% | |
| GGCTGCAACATTGAAAGCGA+GGG | - | chr1.4:79634400-79634419 | MS.gene070952:CDS | 50.0% | |
| GGTGAGAATCGTCGCTACTT+TGG | - | chr1.4:79635543-79635562 | MS.gene070952:CDS | 50.0% | |
| GTGGTAAGACGGTTGGAAGA+TGG | - | chr1.4:79633888-79633907 | MS.gene070952:CDS | 50.0% | |
| GTTGTTCTTCTCGGCTGCAA+TGG | + | chr1.4:79635661-79635680 | None:intergenic | 50.0% | |
| TCAGTGTGTTGAGACTGCAG+AGG | - | chr1.4:79634111-79634130 | MS.gene070952:intron | 50.0% | |
| TCCTGTGGAGAGAAGTTTGG+GGG | - | chr1.4:79634457-79634476 | MS.gene070952:CDS | 50.0% | |
| TGAAGAGTAGGCACGTTGCT+GGG | - | chr1.4:79635284-79635303 | MS.gene070952:intron | 50.0% | |
| TGCAGCAATTGCAGCTACTG+CGG | + | chr1.4:79634002-79634021 | None:intergenic | 50.0% | |
| TTAACTGCTGCTGCTGCAAC+AGG | - | chr1.4:79634214-79634233 | MS.gene070952:CDS | 50.0% | |
| ! | AGCATGAACCTGGGCATTGT+GGG | + | chr1.4:79633954-79633973 | None:intergenic | 50.0% |
| ! | AGCGAATAGTGACTCGGCTT+TGG | - | chr1.4:79634063-79634082 | MS.gene070952:intron | 50.0% |
| ! | TTACACCGCCGTTGTTTCCA+CGG | + | chr1.4:79633826-79633845 | None:intergenic | 50.0% |
| ! | TTTGGCTTCTGCAGCAACGT+TGG | - | chr1.4:79634081-79634100 | MS.gene070952:intron | 50.0% |
| ! | TTTTCCAGACCCAGACGAAG+CGG | + | chr1.4:79634032-79634051 | None:intergenic | 50.0% |
| !! | CGAGGGCATTGAAGGAAGTT+TGG | - | chr1.4:79634417-79634436 | MS.gene070952:CDS | 50.0% |
| !! | CTTGTGGTGTTTCTGGTGGA+CGG | + | chr1.4:79632744-79632763 | None:intergenic | 50.0% |
| !! | TGTTTCTGGTGGACGGAACA+TGG | + | chr1.4:79632737-79632756 | None:intergenic | 50.0% |
| AGAAGTTTGGGGGCTTCTGG+TGG | - | chr1.4:79634467-79634486 | MS.gene070952:CDS | 55.0% | |
| AGCAATTGCAGCTACTGCGG+CGG | + | chr1.4:79633999-79634018 | None:intergenic | 55.0% | |
| CAATGCCCAGGTTCATGCTG+CGG | - | chr1.4:79633955-79633974 | MS.gene070952:CDS | 55.0% | |
| CAGATACCGCAGCATGAACC+TGG | + | chr1.4:79633964-79633983 | None:intergenic | 55.0% | |
| CAGTACGGCCGTGGAAACAA+CGG | - | chr1.4:79633815-79633834 | MS.gene070952:CDS | 55.0% | |
| GAGAGAAGTTTGGGGGCTTC+TGG | - | chr1.4:79634464-79634483 | MS.gene070952:CDS | 55.0% | |
| GCTCACCGCTGAAGCTACTA+TGG | + | chr1.4:79634511-79634530 | None:intergenic | 55.0% | |
| GGGAGACTCTCACACAGTAG+TGG | - | chr1.4:79633133-79633152 | MS.gene070952:intron | 55.0% | |
| GGGCTGCAACATTGAAAGCG+AGG | - | chr1.4:79634399-79634418 | MS.gene070952:CDS | 55.0% | |
| GGTTCATGCTGCGGTATCTG+TGG | - | chr1.4:79633964-79633983 | MS.gene070952:CDS | 55.0% | |
| GTCTGGGTCTGGAAAAGACG+AGG | - | chr1.4:79634036-79634055 | MS.gene070952:intron | 55.0% | |
| TCTCACCGCCTTCCAGCAAA+TGG | + | chr1.4:79635530-79635549 | None:intergenic | 55.0% | |
| TCTCGGCTGCAATGGAAAGC+AGG | + | chr1.4:79635653-79635672 | None:intergenic | 55.0% | |
| TGGGTCGGGTCTCCAGAAAT+GGG | + | chr1.4:79632704-79632723 | None:intergenic | 55.0% | |
| TTGGGGGCTTCTGGTGGTAA+TGG | - | chr1.4:79634473-79634492 | MS.gene070952:CDS | 55.0% | |
| ! | CAGCATGAACCTGGGCATTG+TGG | + | chr1.4:79633955-79633974 | None:intergenic | 55.0% |
| ! | TGTTGAGACTGCAGAGGCGT+TGG | - | chr1.4:79634117-79634136 | MS.gene070952:intron | 55.0% |
| ! | TTCTGCAGCAACGTTGGTGG+CGG | - | chr1.4:79634087-79634106 | MS.gene070952:intron | 55.0% |
| !! | CTTCTGAAGCGCACACGCAA+AGG | - | chr1.4:79634596-79634615 | MS.gene070952:intron | 55.0% |
| !! | GGTGCTTGTGGTGTTTCTGG+TGG | + | chr1.4:79632748-79632767 | None:intergenic | 55.0% |
| !! | GTTGAGACTGCAGAGGCGTT+GGG | - | chr1.4:79634118-79634137 | MS.gene070952:intron | 55.0% |
| !! | TGGTGGTGGTGGTGGTAAGA+CGG | - | chr1.4:79633877-79633896 | MS.gene070952:CDS | 55.0% |
| !! | TTGAGACTGCAGAGGCGTTG+GGG | - | chr1.4:79634119-79634138 | MS.gene070952:intron | 55.0% |
| AAATGGCGTCCCGTCCAAGC+GGG | + | chr1.4:79635513-79635532 | None:intergenic | 60.0% | |
| CAAATGGCGTCCCGTCCAAG+CGG | + | chr1.4:79635514-79635533 | None:intergenic | 60.0% | |
| CGGAGTTAACCACCGCAGCA+AGG | + | chr1.4:79634159-79634178 | None:intergenic | 60.0% | |
| GCCCCCAAACTTCTCTCCAC+AGG | + | chr1.4:79634461-79634480 | None:intergenic | 60.0% | |
| GGAACGGGAACACCTTGCTG+CGG | - | chr1.4:79634144-79634163 | MS.gene070952:intron | 60.0% | |
| GGCTTCTGCAGCAACGTTGG+TGG | - | chr1.4:79634084-79634103 | MS.gene070952:intron | 60.0% | |
| GTCTTACCACCACCACCACC+AGG | + | chr1.4:79633878-79633897 | None:intergenic | 60.0% | |
| GTGGGTCGGGTCTCCAGAAA+TGG | + | chr1.4:79632705-79632724 | None:intergenic | 60.0% | |
| GTTTCCACGGCCGTACTGCA+GGG | + | chr1.4:79633813-79633832 | None:intergenic | 60.0% | |
| TACGGCCGTGGAAACAACGG+CGG | - | chr1.4:79633818-79633837 | MS.gene070952:CDS | 60.0% | |
| TATCTGGGTGGCAGACCACC+TGG | - | chr1.4:79633857-79633876 | MS.gene070952:CDS | 60.0% | |
| TGTTTCCACGGCCGTACTGC+AGG | + | chr1.4:79633814-79633833 | None:intergenic | 60.0% | |
| TTACCACCACCACCACCAGG+TGG | + | chr1.4:79633875-79633894 | None:intergenic | 60.0% | |
| TTGGACGGGACGCCATTTGC+TGG | - | chr1.4:79635515-79635534 | MS.gene070952:CDS | 60.0% | |
| ! | ACGGGACGCCATTTGCTGGA+AGG | - | chr1.4:79635519-79635538 | MS.gene070952:CDS | 60.0% |
| ! | GGACGCCATTTGCTGGAAGG+CGG | - | chr1.4:79635522-79635541 | MS.gene070952:CDS | 60.0% |
| !! | GGTGGTGGTGGTAAGACGGT+TGG | - | chr1.4:79633881-79633900 | MS.gene070952:CDS | 60.0% |
| !! | TGAGACTGCAGAGGCGTTGG+GGG | - | chr1.4:79634120-79634139 | MS.gene070952:intron | 60.0% |
| ACGGGAACACCTTGCTGCGG+TGG | - | chr1.4:79634147-79634166 | MS.gene070952:CDS | 65.0% | |
| AGCAAGGGCCCACAATGCCC+AGG | - | chr1.4:79633943-79633962 | MS.gene070952:CDS | 65.0% | |
| TCCAGACCCAGACGAAGCGG+CGG | + | chr1.4:79634029-79634048 | None:intergenic | 65.0% | |
| TCTTCCCTGCAGTACGGCCG+TGG | - | chr1.4:79633806-79633825 | MS.gene070952:CDS | 65.0% | |
| !! | AGACCACCTGGTGGTGGTGG+TGG | - | chr1.4:79633869-79633888 | MS.gene070952:CDS | 65.0% |
| ACCGCCGCTTCGTCTGGGTC+TGG | - | chr1.4:79634025-79634044 | MS.gene070952:intron | 70.0% | |
| AGACCCAGACGAAGCGGCGG+TGG | + | chr1.4:79634026-79634045 | None:intergenic | 70.0% | |
| CAGCCACCGCCGCTTCGTCT+GGG | - | chr1.4:79634020-79634039 | MS.gene070952:intron | 70.0% | |
| CTGGGTGGCAGACCACCTGG+TGG | - | chr1.4:79633860-79633879 | MS.gene070952:CDS | 70.0% | |
| GGTGGCAGACCACCTGGTGG+TGG | - | chr1.4:79633863-79633882 | MS.gene070952:CDS | 70.0% | |
| !! | AGAGGCGTTGGGGGCGGAAC+GGG | - | chr1.4:79634129-79634148 | MS.gene070952:intron | 70.0% |
| !! | CAGAGGCGTTGGGGGCGGAA+CGG | - | chr1.4:79634128-79634147 | MS.gene070952:intron | 70.0% |
| !! | GACTGCAGAGGCGTTGGGGG+CGG | - | chr1.4:79634123-79634142 | MS.gene070952:intron | 70.0% |
| !! | GGCAGACCACCTGGTGGTGG+TGG | - | chr1.4:79633866-79633885 | MS.gene070952:CDS | 70.0% |
| GCAGCCACCGCCGCTTCGTC+TGG | - | chr1.4:79634019-79634038 | MS.gene070952:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 79632685 | 79635695 | 79632685 | ID=MS.gene070952 |
| chr1.4 | mRNA | 79632685 | 79635695 | 79632685 | ID=MS.gene070952.t1;Parent=MS.gene070952 |
| chr1.4 | exon | 79635393 | 79635695 | 79635393 | ID=MS.gene070952.t1.exon1;Parent=MS.gene070952.t1 |
| chr1.4 | CDS | 79635393 | 79635695 | 79635393 | ID=cds.MS.gene070952.t1;Parent=MS.gene070952.t1 |
| chr1.4 | exon | 79635173 | 79635277 | 79635173 | ID=MS.gene070952.t1.exon2;Parent=MS.gene070952.t1 |
| chr1.4 | CDS | 79635173 | 79635277 | 79635173 | ID=cds.MS.gene070952.t1;Parent=MS.gene070952.t1 |
| chr1.4 | exon | 79634145 | 79634562 | 79634145 | ID=MS.gene070952.t1.exon3;Parent=MS.gene070952.t1 |
| chr1.4 | CDS | 79634145 | 79634562 | 79634145 | ID=cds.MS.gene070952.t1;Parent=MS.gene070952.t1 |
| chr1.4 | exon | 79633763 | 79633990 | 79633763 | ID=MS.gene070952.t1.exon4;Parent=MS.gene070952.t1 |
| chr1.4 | CDS | 79633763 | 79633990 | 79633763 | ID=cds.MS.gene070952.t1;Parent=MS.gene070952.t1 |
| chr1.4 | exon | 79633343 | 79633392 | 79633343 | ID=MS.gene070952.t1.exon5;Parent=MS.gene070952.t1 |
| chr1.4 | CDS | 79633343 | 79633392 | 79633343 | ID=cds.MS.gene070952.t1;Parent=MS.gene070952.t1 |
| chr1.4 | exon | 79633052 | 79633109 | 79633052 | ID=MS.gene070952.t1.exon6;Parent=MS.gene070952.t1 |
| chr1.4 | CDS | 79633052 | 79633109 | 79633052 | ID=cds.MS.gene070952.t1;Parent=MS.gene070952.t1 |
| chr1.4 | exon | 79632685 | 79632899 | 79632685 | ID=MS.gene070952.t1.exon7;Parent=MS.gene070952.t1 |
| chr1.4 | CDS | 79632685 | 79632899 | 79632685 | ID=cds.MS.gene070952.t1;Parent=MS.gene070952.t1 |
| Gene Sequence |
| Protein sequence |
