AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060837

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060837.t1 MTR_4g009960 96.522 1639 53 3 1 1636 1 1638 0.0 3251
MS.gene060837.t1 MTR_4g009960 96.678 1144 34 3 1 1141 1 1143 0.0 2288
MS.gene060837.t1 MTR_4g009960 96.682 1115 33 3 1 1112 1 1114 0.0 2228
MS.gene060837.t1 MTR_8g027685 50.618 1456 585 30 25 1388 21 1434 0.0 1278
MS.gene060837.t1 MTR_3g027610 37.223 497 268 6 645 1098 773 1268 6.79e-93 332
MS.gene060837.t1 MTR_6g052190 68.421 76 24 0 1057 1132 67 142 7.66e-26 105
MS.gene060837.t1 MTR_0321s0030 32.692 104 70 0 645 748 382 485 4.25e-13 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060837.t1 AT1G15290 53.337 1693 645 31 1 1633 1 1608 0.0 1587
MS.gene060837.t1 AT1G15290 57.964 1375 483 18 1 1330 1 1325 0.0 1488
MS.gene060837.t1 AT4G28080 54.628 1426 540 26 1 1345 1 1400 0.0 1392
MS.gene060837.t1 AT1G01320 48.639 1433 596 26 25 1344 21 1426 0.0 1251
MS.gene060837.t1 AT1G01320 48.677 1436 589 27 25 1344 21 1424 0.0 1248
MS.gene060837.t1 AT1G01320 48.369 1441 596 27 25 1344 21 1434 0.0 1244
MS.gene060837.t1 AT3G52140 34.315 577 335 8 565 1098 679 1254 7.15e-89 320
MS.gene060837.t1 AT3G52140 23.133 415 264 10 1 393 79 460 8.28e-12 71.2
MS.gene060837.t1 AT3G52140 33.907 581 336 6 565 1098 679 1258 1.02e-88 319
MS.gene060837.t1 AT3G52140 23.133 415 264 10 1 393 79 460 1.06e-11 70.9
MS.gene060837.t1 AT3G52140 33.907 581 336 6 565 1098 691 1270 1.83e-88 318
MS.gene060837.t1 AT3G52140 33.510 567 334 6 565 1098 691 1247 2.59e-84 305

Find 320 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTTGGTTCATCGTTATT+TGG 0.147486 4.3:-83499090 None:intergenic
CTATCAAAGCTCACTGTTAA+TGG 0.156321 4.3:+83503270 MS.gene060837:CDS
ATTACTTCCATCCTTGTTAT+TGG 0.166034 4.3:-83498962 None:intergenic
TCCACTCATTTCCCTTATTT+TGG 0.191149 4.3:-83503976 None:intergenic
AATAGATGGACGCAATTTAT+TGG 0.191703 4.3:+83500495 MS.gene060837:CDS
TGTTGATACATCGATATTTA+AGG 0.198758 4.3:+83497451 MS.gene060837:CDS
CACCCTCTCCTCCTCAGTTT+TGG 0.205881 4.3:-83497390 None:intergenic
TCCTCCTTAATTAAGGTTAA+AGG 0.227747 4.3:+83492846 MS.gene060837:intron
TACACACGTGCGAAGGTTAT+TGG 0.230875 4.3:+83495146 MS.gene060837:CDS
TTCTTAGTAGACATGGCTTT+AGG 0.241111 4.3:-83492902 None:intergenic
TTCTTGGGCTTTGATGAGTC+TGG 0.246046 4.3:-83495222 None:intergenic
GGTTGTGTCATTCCTGTAAC+TGG 0.257374 4.3:-83503319 None:intergenic
ATATATGTAGCAGCTGTATT+TGG 0.261955 4.3:-83501524 None:intergenic
TCCAGCATCATTGAGTTCTT+TGG 0.262086 4.3:+83503440 MS.gene060837:CDS
TGAGAGTTGTTATCACTTAC+TGG 0.262258 4.3:-83502973 None:intergenic
ATTTCGATATCCTGAACTTT+AGG 0.265597 4.3:-83498363 None:intergenic
TCTACTTGAGAAGCACTTCT+TGG 0.269825 4.3:-83504044 None:intergenic
GATGGGAACTTGGTTCTTCT+TGG 0.274238 4.3:+83498896 MS.gene060837:CDS
AGGACTAAAGATGGGATCTT+TGG 0.280296 4.3:+83499653 MS.gene060837:CDS
CTGTAATACAACGGTGATCT+AGG 0.280296 4.3:-83503918 None:intergenic
TTTCATGCGGAATGTATAAT+TGG 0.282372 4.3:-83503943 None:intergenic
TCGAAAATTGCTCTTGATAA+AGG 0.284820 4.3:+83500523 MS.gene060837:CDS
AGAAAGTTATCTATTCTTAG+AGG 0.288515 4.3:+83500157 MS.gene060837:CDS
TTCTTCCTCCTGCTGCTGCC+AGG 0.289518 4.3:+83503883 MS.gene060837:CDS
AACACAGTTCGACCAAAATA+AGG 0.290171 4.3:+83503964 MS.gene060837:CDS
AGAGCATTTGCGCCTCCTTC+TGG 0.294069 4.3:-83498396 None:intergenic
CCTTGCTATCTCTGACTTCT+CGG 0.294867 4.3:-83504111 None:intergenic
AACATAGCTGAAGCTACTTT+TGG 0.295161 4.3:-83503360 None:intergenic
CTTGAACTTTCTCCTGTTGA+TGG 0.295448 4.3:+83499600 MS.gene060837:CDS
AGGAGATTACTTTCAGCTTC+AGG 0.298242 4.3:+83495599 MS.gene060837:CDS
AGGGCACTGCTTCACAAATC+TGG 0.300618 4.3:+83498733 MS.gene060837:CDS
TCTTAGTAGACATGGCTTTA+GGG 0.301222 4.3:-83492901 None:intergenic
CTTGCAGTATTTCGATGATA+TGG 0.302415 4.3:-83500692 None:intergenic
GACTGATCAATGCAGGCTTA+TGG 0.313310 4.3:+83496923 MS.gene060837:intron
ATAAAGAATAGTTTGTAAAA+TGG 0.314149 4.3:-83492679 None:intergenic
GCAATGGATGTGTCTGTCTT+TGG 0.316597 4.3:-83502378 None:intergenic
TGGGCCTGCTATGTTGCGTT+TGG 0.319442 4.3:-83495202 None:intergenic
CGAGAGGAACTGGACTTAAA+TGG 0.320911 4.3:-83503812 None:intergenic
TAAGACAGAGAAGAAGAAAA+AGG 0.321667 4.3:+83492297 MS.gene060837:CDS
CGAGACGCGGACAACGTTCC+TGG 0.330969 4.3:-83503789 None:intergenic
GGGTGGCAATGGTGGTGGCC+AGG 0.334781 4.3:+83497301 MS.gene060837:CDS
AGCCATAGCACTTTCATTGA+TGG 0.337066 4.3:+83501755 MS.gene060837:CDS
TGGTTCTTCGGTTCCATGTT+TGG 0.338224 4.3:-83503094 None:intergenic
CTTGAGGATGCTGTTAGTTA+TGG 0.341383 4.3:+83500550 MS.gene060837:CDS
GTTTCTCCATTCGGTGTTAC+GGG 0.348777 4.3:-83495288 None:intergenic
TAATGTAACATTACCAGCTT+TGG 0.358993 4.3:-83499479 None:intergenic
TCATACTTTCCAAAGGGCTT+AGG 0.366427 4.3:-83500319 None:intergenic
ATGCTTCTAAAGATCTTGTT+AGG 0.366508 4.3:+83498809 MS.gene060837:CDS
AGTGCTTCTCAAGTAGAAAA+TGG 0.366802 4.3:+83504050 MS.gene060837:CDS
GATAATCATCACCCAAAGTT+TGG 0.372384 4.3:-83500057 None:intergenic
CATACTTTCCAAAGGGCTTA+GGG 0.372446 4.3:-83500318 None:intergenic
AGATTCTTTGAGACGCAAAA+AGG 0.373916 4.3:-83499148 None:intergenic
GTCTAGTATGAATTCTTCTC+AGG 0.374367 4.3:+83497508 MS.gene060837:CDS
ATGTAGTGTGTCAGATCTCC+TGG 0.379389 4.3:+83502502 MS.gene060837:intron
ACTGATTTCATGCATTTAAG+AGG 0.382173 4.3:+83499633 MS.gene060837:CDS
GGTTTCTCCATTCGGTGTTA+CGG 0.383835 4.3:-83495289 None:intergenic
GACGCCGGCGGCTCCGACAT+TGG 0.386095 4.3:-83495324 None:intergenic
CAAATGCTCTTAACATCAAT+AGG 0.386217 4.3:+83498409 MS.gene060837:CDS
TGATTCACAAATTGTATTGA+AGG 0.386441 4.3:+83492496 MS.gene060837:CDS
TGTACAAGGAAGCCAGTTAC+AGG 0.388012 4.3:+83503307 MS.gene060837:CDS
ATTATCATCTCAAAATTCAT+TGG 0.388705 4.3:+83500074 MS.gene060837:CDS
TACCTGCTGAGGATGAAAAC+TGG 0.388867 4.3:+83497279 MS.gene060837:CDS
TATATGCTCGCGAGAGGAAC+TGG 0.390116 4.3:-83503822 None:intergenic
CGTTCCTGGGCTGAAAGGTT+TGG 0.393130 4.3:-83503775 None:intergenic
TTGCTTTCCAAGACCTTTCA+CGG 0.393856 4.3:-83498995 None:intergenic
CGGTCGATTCGATGGGAACT+TGG 0.396649 4.3:+83498886 MS.gene060837:CDS
CAGTTTGGCAATCTTCCATA+TGG 0.398005 4.3:+83497191 MS.gene060837:intron
GCCAATTCAAAAGGGCGTTC+AGG 0.401801 4.3:+83503204 MS.gene060837:CDS
AAGCTTGCTTCCATTTGTTT+CGG 0.401819 4.3:-83503742 None:intergenic
AATACAATTTGTGAATCATA+AGG 0.403344 4.3:-83492491 None:intergenic
GGGCCTGCTATGTTGCGTTT+GGG 0.403564 4.3:-83495201 None:intergenic
TGCAAGGAAACCTAAAGTTC+AGG 0.408345 4.3:+83498353 MS.gene060837:CDS
ATATATAAATGTTGCTATGA+TGG 0.408945 4.3:+83501541 MS.gene060837:CDS
GCAGCAGCAGGAGGAAGAAC+AGG 0.409432 4.3:-83503879 None:intergenic
TTATGATGTTTGTAGTTTGA+GGG 0.410773 4.3:+83498714 MS.gene060837:intron
TAAATGCAACAAAAGATTGT+TGG 0.411016 4.3:+83501616 MS.gene060837:CDS
TCTTGGGCTTTGATGAGTCT+GGG 0.411100 4.3:-83495221 None:intergenic
GGTGGCAATGGTGGTGGCCA+GGG 0.415543 4.3:+83497302 MS.gene060837:CDS
GTGGGATGCTCCTCAATAGA+TGG 0.417473 4.3:+83500481 MS.gene060837:CDS
TCTTCCTCCTGCTGCTGCCA+GGG 0.417626 4.3:+83503884 MS.gene060837:CDS
GAGAGAGACTCACGCAAAAT+CGG 0.418260 4.3:-83495441 None:intergenic
ATAGCCTGCACAACAAAATT+CGG 0.418569 4.3:+83495174 MS.gene060837:CDS
GGTGGTGGCCAGGGAAGAAA+TGG 0.420387 4.3:+83497311 MS.gene060837:CDS
GGAATCCATCGAAAAGATAA+AGG 0.422672 4.3:+83498843 MS.gene060837:CDS
GCCGCCGGCGTCGCCGATAT+CGG 0.423071 4.3:+83495335 MS.gene060837:CDS
CCAGCCGTCAATTTGTGCTT+CGG 0.423507 4.3:+83504427 MS.gene060837:CDS
GAGCCAGCCGTGAAAGGTCT+TGG 0.423819 4.3:+83498988 MS.gene060837:CDS
CAAGGGACCCTGGCAGCAGC+AGG 0.424951 4.3:-83503891 None:intergenic
ATGGAGTCCCCTAAGCCCTT+TGG 0.425143 4.3:+83500310 MS.gene060837:CDS
TTTGTAAGATATAGACTTTG+AGG 0.425238 4.3:-83503463 None:intergenic
CATATTCTCCATTTCTTCCC+TGG 0.425829 4.3:-83497319 None:intergenic
TGGCAAGAAGCCAATTCAAA+AGG 0.429959 4.3:+83503195 MS.gene060837:CDS
ATGACAGGACACTTCTTCCT+TGG 0.430427 4.3:+83498269 MS.gene060837:intron
CAATTCAGCGACTCCATTTG+TGG 0.432158 4.3:-83504399 None:intergenic
AAATGCAACAAAAGATTGTT+GGG 0.434777 4.3:+83501617 MS.gene060837:CDS
GATTTGTAGTTGTCACAAAC+AGG 0.435823 4.3:+83504357 MS.gene060837:CDS
ATTCCCACATTCTCCGATAT+CGG 0.436332 4.3:-83495348 None:intergenic
TTCAGAAGAATTTAATCAAA+GGG 0.436478 4.3:+83497642 MS.gene060837:CDS
GGACTAAAGATGGGATCTTT+GGG 0.437182 4.3:+83499654 MS.gene060837:CDS
CAAAATCACACCTTGCAAAC+GGG 0.444180 4.3:-83500358 None:intergenic
CTGCTCTTCACTGTCATCGC+TGG 0.444835 4.3:-83504315 None:intergenic
TTTCCCTTTGAATCGTTGTC+AGG 0.444893 4.3:-83502536 None:intergenic
ACAAAATCACACCTTGCAAA+CGG 0.444971 4.3:-83500359 None:intergenic
TCTTGTTAGGAAGGTGGTTG+AGG 0.447707 4.3:+83498822 MS.gene060837:CDS
GAAGTGGTTGCTTCAGAGAA+AGG 0.447727 4.3:+83496421 MS.gene060837:CDS
CTCCATTCGGTGTTACGGGT+GGG 0.448376 4.3:-83495284 None:intergenic
ATAAGGGAAATGAGTGGATC+AGG 0.449824 4.3:+83503981 MS.gene060837:CDS
TCTAATTCATTCAAACTACT+TGG 0.453697 4.3:-83499105 None:intergenic
TTTCAAAACGGTCGATTCGA+TGG 0.453948 4.3:+83498878 MS.gene060837:CDS
GCAAAATCTTCCGAAACAAA+TGG 0.456183 4.3:+83503732 MS.gene060837:CDS
GTAGTTGTACGTGGTGGAAA+TGG 0.457295 4.3:+83497572 MS.gene060837:CDS
AACGCTGCTAATCGCAAGTC+TGG 0.458576 4.3:+83503228 MS.gene060837:CDS
GATGCCACAAAAGCAGTAGA+AGG 0.460250 4.3:+83503051 MS.gene060837:CDS
TGGATCTGGTCTTCATATGA+AGG 0.460327 4.3:+83499170 MS.gene060837:CDS
GATATAAATGAGAGGGAGCT+TGG 0.460735 4.3:+83501259 MS.gene060837:CDS
AAGCCCAAACGCAACATAGC+AGG 0.461247 4.3:+83495198 MS.gene060837:CDS
TGAAGATACAGACCAAACTT+TGG 0.463745 4.3:+83500045 MS.gene060837:CDS
CCGACATTGGTGACCCGACC+CGG 0.465203 4.3:-83495311 None:intergenic
GGCCACCATTTATCAGCAAA+AGG 0.466134 4.3:+83501231 MS.gene060837:intron
AACTACACTTAAGATACTTC+AGG 0.466443 4.3:+83501809 MS.gene060837:CDS
CCGACCCGGGTTTCTCCATT+CGG 0.467984 4.3:-83495297 None:intergenic
AACTGGGGTGGCAATGGTGG+TGG 0.469077 4.3:+83497296 MS.gene060837:CDS
GAAGATACAGACCAAACTTT+GGG 0.470379 4.3:+83500046 MS.gene060837:CDS
CGTCTCAAAGAATCTGGATC+TGG 0.471440 4.3:+83499156 MS.gene060837:CDS
GTATTCGATCGGAGTCCATA+TGG 0.473944 4.3:-83497206 None:intergenic
ACACAGTTCGACCAAAATAA+GGG 0.478278 4.3:+83503965 MS.gene060837:CDS
ATTTAAATTATTGAAGAAGA+GGG 0.482111 4.3:+83499017 MS.gene060837:CDS
GCGAGCATATATGATGCAAA+TGG 0.483644 4.3:+83503834 MS.gene060837:CDS
CATTTATCAGCAAAAGGCGT+TGG 0.484364 4.3:+83501237 MS.gene060837:CDS
GTCACCAATGTCGGAGCCGC+CGG 0.484772 4.3:+83495320 MS.gene060837:CDS
GATGAAAACTGGGGTGGCAA+TGG 0.485824 4.3:+83497290 MS.gene060837:CDS
TCTGCACAATTTATGTCACT+TGG 0.486714 4.3:-83499048 None:intergenic
CAATGCAGGACGCGGCTGCA+TGG 0.489380 4.3:+83502298 MS.gene060837:intron
TGTTCAGATTCATCTTGTTG+TGG 0.489492 4.3:-83503660 None:intergenic
GAAGAGCAGGACAATTTAGA+TGG 0.490228 4.3:+83504329 MS.gene060837:CDS
CTTGTTATTGGAACTGCCAT+CGG 0.490398 4.3:-83498950 None:intergenic
AAAGCCATGTCTACTAAGAA+TGG 0.491079 4.3:+83492905 MS.gene060837:CDS
TCATCCTCAGCAGGTAGAGC+TGG 0.492701 4.3:-83497272 None:intergenic
GCCAAAGAACTCAATGATGC+TGG 0.495505 4.3:-83503441 None:intergenic
TCATCCGACGCCGAAGTTGT+CGG 0.498028 4.3:+83495380 MS.gene060837:CDS
AAGGTGACCTTTACTTGCAA+TGG 0.500614 4.3:-83502394 None:intergenic
GTAAGTGTACGACCATCAAC+AGG 0.501736 4.3:-83499612 None:intergenic
ACTTGATGTGAGGAAGCTAT+TGG 0.502522 4.3:+83492637 MS.gene060837:CDS
TTTCCAAGACCTTTCACGGC+TGG 0.504354 4.3:-83498991 None:intergenic
GAGACGCGGACAACGTTCCT+GGG 0.505785 4.3:-83503788 None:intergenic
AAGATACTTCAGGCGAAGCT+TGG 0.506461 4.3:+83501819 MS.gene060837:CDS
CTCTTCATCAGAACTTGAGA+AGG 0.506940 4.3:+83503689 MS.gene060837:CDS
ACCTGCTGAGGATGAAAACT+GGG 0.507757 4.3:+83497280 MS.gene060837:CDS
CCTGACACAATGAAAAGCTA+TGG 0.509610 4.3:+83501292 MS.gene060837:CDS
GACTCCATGTCATAATCTCT+AGG 0.510149 4.3:-83500295 None:intergenic
TAGTCCTGACAACGATTCAA+AGG 0.510179 4.3:+83502532 MS.gene060837:CDS
GAAGAAGATGATAGAGGCAA+AGG 0.512391 4.3:+83495579 MS.gene060837:CDS
CAGCCTTGTTCCCGTTTGCA+AGG 0.512432 4.3:+83500348 MS.gene060837:CDS
GAAAACTGGGGTGGCAATGG+TGG 0.512966 4.3:+83497293 MS.gene060837:CDS
TCTCCATTCGGTGTTACGGG+TGG 0.513307 4.3:-83495285 None:intergenic
CGAGCATATATGATGCAAAT+GGG 0.513641 4.3:+83503835 MS.gene060837:CDS
CTGACACAATGAAAAGCTAT+GGG 0.516207 4.3:+83501293 MS.gene060837:CDS
TTGCAAGTAAAGGTCACCTT+AGG 0.517425 4.3:+83502397 MS.gene060837:CDS
GCATTTAAGAGGACTAAAGA+TGG 0.519513 4.3:+83499644 MS.gene060837:CDS
TGAAGGTTAAAATCAGCAAT+GGG 0.521471 4.3:+83496389 MS.gene060837:intron
GTTCAGAAGAATTTAATCAA+AGG 0.522982 4.3:+83497641 MS.gene060837:CDS
GCAAAGATGATGACTGTTTG+TGG 0.524974 4.3:+83500668 MS.gene060837:CDS
CTGAAGGAAGAAGATGATAG+AGG 0.525936 4.3:+83495573 MS.gene060837:CDS
AGTCCTGACAACGATTCAAA+GGG 0.527770 4.3:+83502533 MS.gene060837:CDS
GAGAATATGAACGTCGACCA+TGG 0.529840 4.3:+83497333 MS.gene060837:CDS
CAATGAAAGTGCTATGGCTA+TGG 0.530414 4.3:-83501751 None:intergenic
GAAAGTTATCTATTCTTAGA+GGG 0.530875 4.3:+83500158 MS.gene060837:CDS
GACACATCCATTGCAAGTAA+AGG 0.533529 4.3:+83502387 MS.gene060837:CDS
TTTGAAGAAATGTGAACTGA+AGG 0.535413 4.3:+83495557 MS.gene060837:CDS
ATAATATCATACTTTCCAAA+GGG 0.536399 4.3:-83500325 None:intergenic
AAACTATTCTTTATCTCATG+AGG 0.537567 4.3:+83492688 MS.gene060837:CDS
TTCTAAAGATCTTGTTAGGA+AGG 0.540024 4.3:+83498813 MS.gene060837:CDS
TAAATTGCGTCCATCTATTG+AGG 0.540829 4.3:-83500491 None:intergenic
TTCTCCGATATCGGCGACGC+CGG 0.541241 4.3:-83495339 None:intergenic
GGCAAGAAGCCAATTCAAAA+GGG 0.541383 4.3:+83503196 MS.gene060837:CDS
CAGCGATGACAGTGAAGAGC+AGG 0.541437 4.3:+83504316 MS.gene060837:CDS
GATGGGATCTTTGGGTGAAG+TGG 0.541732 4.3:+83499662 MS.gene060837:CDS
GATAATATCATACTTTCCAA+AGG 0.541815 4.3:-83500326 None:intergenic
GTTGGGAGCAGATCATATAC+AGG 0.541942 4.3:+83501634 MS.gene060837:CDS
CGAATGGAGAAACCCGGGTC+GGG 0.543694 4.3:+83495298 MS.gene060837:CDS
TTCCAAAACTGAGGAGGAGA+GGG 0.548087 4.3:+83497388 MS.gene060837:CDS
AATTTAAATTATTGAAGAAG+AGG 0.548721 4.3:+83499016 MS.gene060837:CDS
AATGTTGCTATGATGGAAGA+AGG 0.549010 4.3:+83501548 MS.gene060837:CDS
TTCTCTTGTAGACATTATTG+TGG 0.549228 4.3:+83492463 MS.gene060837:CDS
ACAGACCGCATGTGAAATGT+AGG 0.549846 4.3:-83501496 None:intergenic
GCACTTCTTGGAACAAACTC+AGG 0.551151 4.3:-83504032 None:intergenic
TGTCAGGACTAATAAAATCC+AGG 0.551229 4.3:-83502520 None:intergenic
TCCGATATCGGCGACGCCGG+CGG 0.551539 4.3:-83495336 None:intergenic
GGGACCCTGGCAGCAGCAGG+AGG 0.554089 4.3:-83503888 None:intergenic
ATGGACTCCGATCGAATACA+TGG 0.555519 4.3:+83497210 MS.gene060837:CDS
GGCAGTTCCAATAACAAGGA+TGG 0.555747 4.3:+83498955 MS.gene060837:CDS
TGCTATGATGGAAGAAGGCA+TGG 0.555990 4.3:+83501553 MS.gene060837:CDS
CAGGACAATTTAGATGGTGA+AGG 0.556051 4.3:+83504335 MS.gene060837:CDS
CCGTCTGCAACATATTGAGC+TGG 0.557066 4.3:+83501336 MS.gene060837:CDS
TCTGGAGCTGATTCATCAGA+AGG 0.557326 4.3:+83498751 MS.gene060837:CDS
AGAAGAATTCATACTAGACT+TGG 0.558539 4.3:-83497504 None:intergenic
AGACATCATCTGATGAAGGT+TGG 0.559635 4.3:+83503175 MS.gene060837:CDS
AGCCCACCCGTAACACCGAA+TGG 0.560880 4.3:+83495282 MS.gene060837:CDS
CCGAGAAGTCAGAGATAGCA+AGG 0.561618 4.3:+83504111 MS.gene060837:CDS
TTCAAAACGGTCGATTCGAT+GGG 0.561855 4.3:+83498879 MS.gene060837:CDS
TGGCTAGTTGCTCCATCCGT+TGG 0.563157 4.3:+83497230 MS.gene060837:CDS
TGCGTATAGTCTTCTTGCTG+TGG 0.563419 4.3:+83500715 MS.gene060837:CDS
TGTCTACTAAGAATGGTTGA+AGG 0.563623 4.3:+83492912 MS.gene060837:CDS
TAAAGATCTTGTTAGGAAGG+TGG 0.563770 4.3:+83498816 MS.gene060837:CDS
ATGAAGGTTAAAATCAGCAA+TGG 0.565638 4.3:+83496388 MS.gene060837:intron
TGTAATACAACGGTGATCTA+GGG 0.566284 4.3:-83503917 None:intergenic
TCAACCATTCTTAGTAGACA+TGG 0.567302 4.3:-83492909 None:intergenic
GACAACGTTCCTGGGCTGAA+AGG 0.567359 4.3:-83503780 None:intergenic
AATGGCTTTAAAACTGTACC+TGG 0.567677 4.3:-83503504 None:intergenic
CGAACCGAAGCACAAATTGA+CGG 0.568612 4.3:-83504431 None:intergenic
ATTTCAAAATCTGTTGCCCA+TGG 0.568824 4.3:-83497350 None:intergenic
TTCCATCAATGAAAGTGCTA+TGG 0.569017 4.3:-83501757 None:intergenic
ACAATAATGTCTACAAGAGA+AGG 0.569410 4.3:-83492461 None:intergenic
TTCTCTTCCTTCCAAAACTG+AGG 0.569915 4.3:+83497379 MS.gene060837:CDS
GAAAGAGATTCACCAACGGA+TGG 0.571329 4.3:-83497242 None:intergenic
CCGGGTCGGGTCACCAATGT+CGG 0.572438 4.3:+83495311 MS.gene060837:CDS
GTCGCCGATATCGGAGAATG+TGG 0.573057 4.3:+83495344 MS.gene060837:CDS
GCAGCCAAACCTTTCAGCCC+AGG 0.574768 4.3:+83503771 MS.gene060837:CDS
TAACATTACCAGCTTTGGCA+AGG 0.575724 4.3:-83499474 None:intergenic
AACGGTGATCTAGGGCCACA+AGG 0.575937 4.3:-83503909 None:intergenic
TATGATGCAAATGGGAGTCA+AGG 0.576434 4.3:+83503843 MS.gene060837:CDS
CACAGAAGATCTTCGAACTC+AGG 0.577385 4.3:+83501842 MS.gene060837:CDS
AAGAGCCAAGTGTTTCAAAA+CGG 0.577737 4.3:+83498866 MS.gene060837:CDS
CCGAAGCACAAATTGACGGC+TGG 0.579050 4.3:-83504427 None:intergenic
GTGAACAACAACTACGGCCA+AGG 0.579822 4.3:-83498286 None:intergenic
TGAAGTTGCCTTGCCAAAGC+TGG 0.581024 4.3:+83499466 MS.gene060837:CDS
CGATGGCAGTTCCAATAACA+AGG 0.581847 4.3:+83498951 MS.gene060837:CDS
TCTAGGGCCACAAGGGACCC+TGG 0.583121 4.3:-83503901 None:intergenic
TATGAGACATCATCTGATGA+AGG 0.583464 4.3:+83503171 MS.gene060837:CDS
ATCGGAGAATGTGGGAATGG+TGG 0.586574 4.3:+83495353 MS.gene060837:CDS
AATGTCGAGCCAGCCGTGAA+AGG 0.590201 4.3:+83498982 MS.gene060837:CDS
TGCTGTTAGTTATGGAACAA+AGG 0.590951 4.3:+83500558 MS.gene060837:CDS
GAAGCTATTGGCTGTGAAGG+TGG 0.592150 4.3:+83492649 MS.gene060837:CDS
CATTTAAGAGGACTAAAGAT+GGG 0.592361 4.3:+83499645 MS.gene060837:CDS
CAACTAGCCATGTATTCGAT+CGG 0.592555 4.3:-83497217 None:intergenic
ACACCTTGCAAACGGGAACA+AGG 0.593546 4.3:-83500351 None:intergenic
TGTTATGCATCGAGATCAAG+TGG 0.596945 4.3:+83497535 MS.gene060837:CDS
ATGATGCTCAACGGAAACAA+AGG 0.597829 4.3:+83502558 MS.gene060837:CDS
CGACATTGGTGACCCGACCC+GGG 0.598246 4.3:-83495310 None:intergenic
GAAGTCGCTGCTGCACCACC+AGG 0.600031 4.3:+83503486 MS.gene060837:CDS
ACTCCATGTCATAATCTCTA+GGG 0.600607 4.3:-83500294 None:intergenic
CTTCCAAAACTGAGGAGGAG+AGG 0.601277 4.3:+83497387 MS.gene060837:CDS
TCCATTGTAGTTGTACGTGG+TGG 0.601584 4.3:+83497566 MS.gene060837:CDS
TGGTCGAACTGTGTTTCATG+CGG 0.602284 4.3:-83503956 None:intergenic
GATATCGGAGAATGTGGGAA+TGG 0.602646 4.3:+83495350 MS.gene060837:CDS
TCTAGTATGAATTCTTCTCA+GGG 0.603146 4.3:+83497509 MS.gene060837:CDS
TCTTCCTTCCAAAACTGAGG+AGG 0.604568 4.3:+83497382 MS.gene060837:CDS
ATACAAAGTGATTGTATGTG+TGG 0.605175 4.3:-83499896 None:intergenic
GCTGCTGCCAGGGTCCCTTG+TGG 0.605816 4.3:+83503894 MS.gene060837:CDS
ACAGCTACAGTGAAGGCTGT+TGG 0.607642 4.3:+83498321 MS.gene060837:CDS
TCATCAAAATGCTGATGCTG+TGG 0.607803 4.3:+83504166 MS.gene060837:CDS
ATGGCCCCAAAATCAGGGAA+AGG 0.608175 4.3:+83492259 MS.gene060837:CDS
AAATCCGACAACTTCGGCGT+CGG 0.609901 4.3:-83495384 None:intergenic
ATACTTTCCAAAGGGCTTAG+GGG 0.611042 4.3:-83500317 None:intergenic
GAAATGTTCATGTGGCACTT+CGG 0.611665 4.3:+83501576 MS.gene060837:CDS
CTTCTGCAACAGCTCAGCAG+AGG 0.612287 4.3:+83496493 MS.gene060837:CDS
CTTTCCAGCTCTACCTGCTG+AGG 0.612344 4.3:+83497268 MS.gene060837:CDS
GGCGTTGGATATAAATGAGA+GGG 0.613340 4.3:+83501252 MS.gene060837:CDS
GATGAGCCTAAAGTTAGTGA+AGG 0.613402 4.3:+83504188 MS.gene060837:CDS
AGAATATGAACGTCGACCAT+GGG 0.613802 4.3:+83497334 MS.gene060837:CDS
CTGTTGGTAATGCGAATGCA+AGG 0.614545 4.3:+83498337 MS.gene060837:CDS
CAAAGGGAAATGATGCTCAA+CGG 0.615314 4.3:+83502549 MS.gene060837:CDS
CTGGAGCTGATTCATCAGAA+GGG 0.615615 4.3:+83498752 MS.gene060837:CDS
ACAGCTTCAACTGTCACCAC+TGG 0.616013 4.3:-83503147 None:intergenic
AGAGACTCACGCAAAATCGG+AGG 0.616020 4.3:-83495438 None:intergenic
ACAGTGAGCTTTGATAGAAG+AGG 0.618015 4.3:-83503264 None:intergenic
TTCCTCCTACATTTCACATG+CGG 0.618216 4.3:+83501491 MS.gene060837:CDS
AGTGTCGAGGCAATGACTGA+AGG 0.618463 4.3:-83499995 None:intergenic
AAACAGGAAAATTCAACCGA+TGG 0.618685 4.3:+83498934 MS.gene060837:CDS
TTCTGATAATCACATGTACA+AGG 0.619711 4.3:+83503293 MS.gene060837:CDS
TGGATATACAGCTACAGTGA+AGG 0.619964 4.3:+83498314 MS.gene060837:CDS
ACGGAAACAAAGGCGTCCAA+AGG 0.622969 4.3:+83502568 MS.gene060837:CDS
GAAATAGATGATCAACCAGA+AGG 0.623748 4.3:+83498381 MS.gene060837:CDS
GGAACAAACTCAGGAGCATG+TGG 0.623868 4.3:-83504023 None:intergenic
GAAGAAACAAAAGCCAAACA+TGG 0.625483 4.3:+83503081 MS.gene060837:CDS
GCAAGTCTGGACGCAGACAA+CGG 0.626501 4.3:+83503241 MS.gene060837:CDS
ACGGTGATCTAGGGCCACAA+GGG 0.627019 4.3:-83503908 None:intergenic
TCTTGATAAAGGAAAGCTTG+AGG 0.627831 4.3:+83500534 MS.gene060837:CDS
CAATGGGAAAGTAATAGAAG+TGG 0.628378 4.3:+83496405 MS.gene060837:CDS
TCTTAGAGGGCTCTGTCACA+AGG 0.629150 4.3:+83500171 MS.gene060837:CDS
TGCAGCTATACAGCATGTGA+TGG 0.629382 4.3:+83497478 MS.gene060837:CDS
CAAGTCATCAAAATTTGACA+AGG 0.633172 4.3:-83498785 None:intergenic
GACCGCATGTGAAATGTAGG+AGG 0.635785 4.3:-83501493 None:intergenic
TGGACTTAAATGGCGAGACG+CGG 0.637164 4.3:-83503802 None:intergenic
TCCACCACGTACAACTACAA+TGG 0.637446 4.3:-83497567 None:intergenic
CTGATAAGATACTTGATGTG+AGG 0.638400 4.3:+83492627 MS.gene060837:CDS
TAACACCGAATGGAGAAACC+CGG 0.639631 4.3:+83495292 MS.gene060837:CDS
CCAGCTCAATATGTTGCAGA+CGG 0.645176 4.3:-83501336 None:intergenic
AAGCAACTACACACGTGCGA+AGG 0.649155 4.3:+83495139 MS.gene060837:CDS
GTCTCTACAGAGTCACACAT+TGG 0.649163 4.3:+83496465 MS.gene060837:CDS
GCATCATATATGCTCGCGAG+AGG 0.650020 4.3:-83503828 None:intergenic
GCTGTGGTTCTCTACCACAC+AGG 0.652971 4.3:+83500731 MS.gene060837:CDS
AGGCGTTGGATATAAATGAG+AGG 0.654787 4.3:+83501251 MS.gene060837:CDS
ACAGTGGTGAACAACAACTA+CGG 0.656822 4.3:-83498292 None:intergenic
AGGCATGGGAAATGTTCATG+TGG 0.658266 4.3:+83501568 MS.gene060837:CDS
GGATCTGTATCAGCATCAGA+AGG 0.658933 4.3:-83503639 None:intergenic
CCTGGTTAAAATCTCCTGTG+TGG 0.659202 4.3:-83500745 None:intergenic
ACCAAAATAAGGGAAATGAG+TGG 0.661708 4.3:+83503975 MS.gene060837:CDS
CCGAATGGAGAAACCCGGGT+CGG 0.663804 4.3:+83495297 MS.gene060837:CDS
ATAGATGATCAACCAGAAGG+AGG 0.665377 4.3:+83498384 MS.gene060837:CDS
GAGGAAGCTATTGGCTGTGA+AGG 0.666270 4.3:+83492646 MS.gene060837:CDS
TCGCCGATATCGGAGAATGT+GGG 0.668154 4.3:+83495345 MS.gene060837:CDS
GCTGAGGATGAAAACTGGGG+TGG 0.669493 4.3:+83497284 MS.gene060837:CDS
GCCCATAATCAAAACAAGAG+CGG 0.671925 4.3:+83495255 MS.gene060837:CDS
TCTCAGCATGCACAAGCCAG+TGG 0.675509 4.3:+83503131 MS.gene060837:CDS
AAGTGACATAAATTGTGCAG+AGG 0.677511 4.3:+83499050 MS.gene060837:CDS
GTTTGAAAGAGATTCACCAA+CGG 0.679876 4.3:-83497246 None:intergenic
AACACCGAATGGAGAAACCC+GGG 0.682311 4.3:+83495293 MS.gene060837:CDS
TAATTGGTTCTGTAATACAA+CGG 0.683200 4.3:-83503927 None:intergenic
AGGGAAATGAGTGGATCAGG+TGG 0.683861 4.3:+83503984 MS.gene060837:CDS
TTATCCATTGTAGTTGTACG+TGG 0.684216 4.3:+83497563 MS.gene060837:CDS
GTAGTTGTTGTTCACCACTG+TGG 0.690388 4.3:+83498294 MS.gene060837:CDS
GGTGGATGAGCTTATCAACA+TGG 0.709276 4.3:+83499427 MS.gene060837:CDS
GTTCCCTAGAGATTATGACA+TGG 0.726585 4.3:+83500291 MS.gene060837:CDS
GTTATGCATCGAGATCAAGT+GGG 0.737440 4.3:+83497536 MS.gene060837:CDS
GGCTTTAAAACTGTACCTGG+TGG 0.745453 4.3:-83503501 None:intergenic
GCTATGATGGAAGAAGGCAT+GGG 0.746131 4.3:+83501554 MS.gene060837:CDS
CTGTAGCTGTATATCCACAG+TGG 0.760165 4.3:-83498308 None:intergenic
TGACACAATGAAAAGCTATG+GGG 0.760596 4.3:+83501294 MS.gene060837:CDS
CCTGCTGAGGATGAAAACTG+GGG 0.763661 4.3:+83497281 MS.gene060837:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.3 gene 83492259 83504457 83492259 ID=MS.gene060837
chr4.3 mRNA 83492259 83504457 83492259 ID=MS.gene060837.t1;Parent=MS.gene060837
chr4.3 exon 83492259 83492328 83492259 ID=MS.gene060837.t1.exon1;Parent=MS.gene060837.t1
chr4.3 CDS 83492259 83492328 83492259 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83492453 83492517 83492453 ID=MS.gene060837.t1.exon2;Parent=MS.gene060837.t1
chr4.3 CDS 83492453 83492517 83492453 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83492617 83492709 83492617 ID=MS.gene060837.t1.exon3;Parent=MS.gene060837.t1
chr4.3 CDS 83492617 83492709 83492617 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83492861 83492933 83492861 ID=MS.gene060837.t1.exon4;Parent=MS.gene060837.t1
chr4.3 CDS 83492861 83492933 83492861 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83495118 83495450 83495118 ID=MS.gene060837.t1.exon5;Parent=MS.gene060837.t1
chr4.3 CDS 83495118 83495450 83495118 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83495556 83495620 83495556 ID=MS.gene060837.t1.exon6;Parent=MS.gene060837.t1
chr4.3 CDS 83495556 83495620 83495556 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83496394 83496525 83496394 ID=MS.gene060837.t1.exon7;Parent=MS.gene060837.t1
chr4.3 CDS 83496394 83496525 83496394 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83496938 83496979 83496938 ID=MS.gene060837.t1.exon8;Parent=MS.gene060837.t1
chr4.3 CDS 83496938 83496979 83496938 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83497194 83497694 83497194 ID=MS.gene060837.t1.exon9;Parent=MS.gene060837.t1
chr4.3 CDS 83497194 83497694 83497194 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83498276 83498430 83498276 ID=MS.gene060837.t1.exon10;Parent=MS.gene060837.t1
chr4.3 CDS 83498276 83498430 83498276 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83498729 83499191 83498729 ID=MS.gene060837.t1.exon11;Parent=MS.gene060837.t1
chr4.3 CDS 83498729 83499191 83498729 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83499425 83499487 83499425 ID=MS.gene060837.t1.exon12;Parent=MS.gene060837.t1
chr4.3 CDS 83499425 83499487 83499425 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83499582 83499683 83499582 ID=MS.gene060837.t1.exon13;Parent=MS.gene060837.t1
chr4.3 CDS 83499582 83499683 83499582 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83499875 83500192 83499875 ID=MS.gene060837.t1.exon14;Parent=MS.gene060837.t1
chr4.3 CDS 83499875 83500192 83499875 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83500277 83500369 83500277 ID=MS.gene060837.t1.exon15;Parent=MS.gene060837.t1
chr4.3 CDS 83500277 83500369 83500277 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83500478 83500579 83500478 ID=MS.gene060837.t1.exon16;Parent=MS.gene060837.t1
chr4.3 CDS 83500478 83500579 83500478 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83500662 83500766 83500662 ID=MS.gene060837.t1.exon17;Parent=MS.gene060837.t1
chr4.3 CDS 83500662 83500766 83500662 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83501232 83501365 83501232 ID=MS.gene060837.t1.exon18;Parent=MS.gene060837.t1
chr4.3 CDS 83501232 83501365 83501232 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83501472 83501655 83501472 ID=MS.gene060837.t1.exon19;Parent=MS.gene060837.t1
chr4.3 CDS 83501472 83501655 83501472 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83501732 83501863 83501732 ID=MS.gene060837.t1.exon20;Parent=MS.gene060837.t1
chr4.3 CDS 83501732 83501863 83501732 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83502306 83502418 83502306 ID=MS.gene060837.t1.exon21;Parent=MS.gene060837.t1
chr4.3 CDS 83502306 83502418 83502306 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83502508 83502589 83502508 ID=MS.gene060837.t1.exon22;Parent=MS.gene060837.t1
chr4.3 CDS 83502508 83502589 83502508 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
chr4.3 exon 83502967 83504457 83502967 ID=MS.gene060837.t1.exon23;Parent=MS.gene060837.t1
chr4.3 CDS 83502967 83504457 83502967 ID=cds.MS.gene060837.t1;Parent=MS.gene060837.t1
Gene Sequence

>MS.gene060837

ATGGCCCCAAAATCAGGGAAAGGAAAAACAAATAAAGCTAAGACAGAGAAGAAGAAAAAGGAGGAGAAAGGTCACATTCTTTATCTTACTTCAAGAATTTTAAAAACAAACATCATATTTTTATGTCTTTTTTTTTTTTTTTAATGAAACATGCTTTACTAAATAATTACTTGTTTTAATTTTCATTTTTTCAGCTGTGGCACCTTCTCTTGTAGACATTATTGTGGTAACTCCTTATGATTCACAAATTGTATTGAAGGTACACATTTTTTCTCACATTCATCAAAATTGATTTTTTAAAAATTGGTTTAATTTATTATTAACAATGATTAATAATATTCTTTTTTTTGTGCAAAAGGGTATCTCTACTGATAAGATACTTGATGTGAGGAAGCTATTGGCTGTGAAGGTGGAGACATGCCATTTTACAAACTATTCTTTATCTCATGAGGTTTGTGTTTTTTAGCTCAATTGAGTATTTTTTTTTTTTTAATATTTCATCATTCTTTAATTTATTAATAGTTTATTCCTAACTAGCCAAACTAAGTACTTAGCTTTTGATTATTTAATTAATTGGTTTATTCTCTTCCTCCTTAATTAAGGTTAAAGGTCAGAGATTAAATGACAGAGTTGAAGTTGTTACCCTAAAGCCATGTCTACTAAGAATGGTTGAAGGTAGGTGTAGCTAGTATATCTGTTTATTTAACATCAACTACTATTTGTGTCACTCACATATTTGCATGTGCATTTTGTTGAATTTACCATGTGTTGAAATTCTTATGCAATTAGTATAATCTAAGTACTTTATTGTATCTTAGCAAAGTGGGTAATAAACTACTTAGTGATGCTAAGCAAATCTTGCACCTATAAAAAAATAAGCCATGAAAAGGTCAATTTCAAGTAAAATATATTGACTGCTGTGTATCATATTTTTACATGTAAATTCCATTTTGTGTTCTGTTTTCAAAAGTTTGTATAAAAAAGATGAAAAAAATAATAGTTTACTTTTTTACATATAAATATTTGAAAACATAAAAAAGAGTAAAAACAAATGGAAACTTTATAATTTAAATAAAACATTTAAATTTTTTCCTTTTTCCTTTTTCCTAATTAAACATACCCATATTTATTTATTTTTTGACAAAAAACATACCCATATTTGTTTATCTACTTTTAGTGCTGATTGAATAACAAACGGGGCATGTATAAATGACATAGTGTGTGGACATGTCTAAGGTGGATGTGACCACTAATGAACCATAACTATAGGCAATATTAACATTAACATTTAAATACATAAGGTTAAATTTTTGATATATTCAATGGTTATTACTATTGGTAATGGTTCATCGATCCCCCATCTACCACGTTCTTTGCTTCATCTACCAATGGAAAAAGTCAAAGAGTTTTACCATTTTTTATATCAAAAAAATAAATATGAACAAGTGTTTTGGAATACTGGTACTCTTTATTTATAGGTTGCAAAATCAATGCTGCCCTTTATTTTTTGCTGAAACATTTGGTATCTTTCTTTTTGGTAACAAACATTTGGTATCTTTCAAAGTTGAAGTTGAGTACAATCTAATTTTAGATATTTATTTTTAAAATGTAGTACTAGAATGAATGATATTTTTAGATTTGGAATCTAAGAAAATTCTCTTGTTTCCCTCATTCTCTTGTTAGAAACTTTGTTCAATGTCACTAGTGTCAAAGCCTCTAAATAATTATTGAATCATTCCATGTATTGATTCATAAGATTTGTTTATTCTTATAGTATATATTTGGTGATTTGAATCAACTATTTGGTAAAAATTCATGTGAGTAACTTAACATAAAATATATGGTTAGGAATCGCTCTTTAATGCTTCCCATATTGGAGAAGACAGGTTGCTCCTAAGAAGTCATTAAATTTTTTATGGTAACATAAAAATATCATTTTCTGGGGGCGCCCTTGTAAAACTCTGAAAGCAATGACATTCATTGGTTCAGATGTTTTCAACAAAATCTATTTTTTTTTTAACAAGTTAAAATAACACAAAAACTATTTGATATACTAAAAAGAAATATTTTATTTATTAGAAATGAAAATGTACTAGCTTTTTCAAACAATTTTTCATATTTTAATTGTTTTAATTTTTTTCTCAGATAAATGTAAAGAATATAGTCATTTTCATTTGCGGTGATATTTGTTTTTGTGTGATGCATTGATTGATTCTATAGACTTTCTGTGTGTCATTTATTCATTCAAGTTGCGTCCTTAGTGGAATACCAAACCCCACCTCTCTGTTTCCAATAAATCTCCATCACATGTTTATATATTCAATAATAAATAATTTAACTTATGTTTGGAGCGGGATTTTGAAAGAAAAAGTTATAGAAATCTTTCTAAAAATAAAAAAAAAATGTAATAAAATATTTGTAATATTATAAAGAAAAAAGTTGTAAAATACTTGAAAAAATAAATTCAATGGATTCAAATATTCTAGAATCTTTTTTGTTGATCAAATTTATCTACTAGAAAAAAATCATAAGTTCAACTTACCTGAGCTAAAGCTTGAAGAATAAAATTATACTAAAATGTAAGTTTGACCCTTCAAAATCCTCCAAAACTCTCGCTCTAAATATATAATTGTATTATTATTATTTTTATTCATATTTACAAATACCTTACTCAACATATCAAATATCTCTACAACTTTCCTAATGTAAGTTGTATTTACGGACTACATCATGCATGCATTTTTATTAAGAGCTAATCATTTTTTTAATAGATTATTAAGAGTTTAATTGGTATATATTGTTGATGTATCCATTTTTACCCTGAAAATAAATATAATTTTTTATTTTTTATTTTTACAGAGAATTACAATGAAGAATCTCAAGCAACTACACACGTGCGAAGGTTATTGGACATTATAGCCTGCACAACAAAATTCGGAAAGCCCAAACGCAACATAGCAGGCCCAGACTCATCAAAGCCCAAGAAAAACGGAAAAGCCCATAATCAAAACAAGAGCGGTTTGAGCCCACCCGTAACACCGAATGGAGAAACCCGGGTCGGGTCACCAATGTCGGAGCCGCCGGCGTCGCCGATATCGGAGAATGTGGGAATGGTGGCGATTCATCCGACGCCGAAGTTGTCGGATTTTTATGAGTTCTTTTCATTTTCGAATCTCACTCCTCCGATTTTGCGTGAGTCTCTCTCTCTCTCTCTCTCTCTCTTCAATTTTCATGCGTTTTTGCTAGGGTTGAAAATTTGGCATGGTGATAAGGGTATTTATGTCTTTTTATATGCAGATTTGAAGAAATGTGAACTGAAGGAAGAAGATGATAGAGGCAAAGGAGATTACTTTCAGCTTCAGGTTCTGCTAATTTTTCTTTTTTGTTCCTTATTTGTTTTGTTATTTAGGGCTTCTTTGAATTTGAATTGTTAGTTTCAGCTTATATAATACTATGAAATACGGAAACGGACACGGGACACGGTCAGTCTGACACAATTTGATAAAATCACATAATTTACTGCAAATATATGTGTCGCGACACCTTTCTGACATCGGGACACACCTAATCCGAGGAGTGTCCGTGCTTTATAGATGTAATATGATATGACCAAATGCTTGTGAGCTTATAAGCTATAAGCTCAAAAAATGTGACTTGCCAAACAAACGCTTTGTGTGGCAAGACAAAAATGCTTGTTTATACTCCATCCGTTTCAAAATGAGTGTCGCTTTAGCCAATTGCACATAGATTAAGGAATGGAATAAAGTAGTCAAATGTCATAGCAATTTTACCAAATTATCCTAATCAACTATTGGTTTGTTTTTCATCAAAGAAAAAATAATACTTTAGAAGTAGTGTAACATAGTATTAATTGGAGGGTACAATTGAAAAGAAAAAGTTATTATTGCATTGAAAACCGAAAGTGACATTCATTTTGAAACAATTTTTTTTGGCTAAAGCGACACTCATTTTGAAACGGAGGGAGTAGTGTATAAGCTCGTATAATTGTTGTTCTTTCACGAGCATATATATCACATTGTATTAAAAAAAAATTAAATGTATTACCCTGTAATATTGTTATGGTTGCATGTGTCTGATTTAAAGCTGAAAGTGTAAATGTTGTTGGTGCATGAAGGTTAAAATCAGCAATGGGAAAGTAATAGAAGTGGTTGCTTCAGAGAAAGGCTTTTACAGTGTTGGAAAGCTGTCTCTACAGAGTCACACATTGGTTGATCTTCTGCAACAGCTCAGCAGAGGTTTTGCTAATGTAAGTTTCTATTTATGTACATATTTATTTGATTGTCTGGTTATAACCTCTTGGTCATTATTATTTTTTGTTGTATATTGTCTTTAAATAATATAATAGTCATTTAATTTGTTAAAAAAAATTCTTATATACTCTTCAAAGAAATTTATTTTGATTTTAGTAAATTAGTTTGTTAGTTTATTCTAACGATTCATAGCTTCCAACTTTGTAGAAATATCTGCACACACATTTCCTTGGTATTAAATAATGATAACTAATGAATAATAAATTTTTCGGTAAAAAATGCCAACTTAGTGATATTCATGAATCATGACGTTATACACGGGCCAGATTCTAAATGATTTCCTATTGAATGGCTAGCTATACTTTCATGTGTTTTCTGCTGACTCTAACAAATGACTGATCAATGCAGGCTTATGGATCATTGATGAAAGCTTTTGCGGATCGTAACAAGGTTAGCTTTACATTAAATGAAATTGGTCTTGGTTTTTTTTTTGAGAAAAAGAGTTCGATAACTTAATGATTGTGCAAACAAGTTTTACGCAGACATTCGTTAATATTACACTGATGCAAGATAATGAAATATGGTTGGACATTATTGTAAATTTTACTCTGTACAGTCTTTAAACTCAGATTTTGTTTTATTAAATAACTGCATAATTCTCCAGTTTGGCAATCTTCCATATGGACTCCGATCGAATACATGGCTAGTTGCTCCATCCGTTGGTGAATCTCTTTCAAACTTTCCAGCTCTACCTGCTGAGGATGAAAACTGGGGTGGCAATGGTGGTGGCCAGGGAAGAAATGGAGAATATGAACGTCGACCATGGGCAACAGATTTTGAAATTTTGGCTTCTCTTCCTTCCAAAACTGAGGAGGAGAGGGTGATCAGAGACCGAAAAGCTTTTCTACTTCATAATCAGTTTGTTGATACATCGATATTTAAGGCTGTTGCAGCTATACAGCATGTGATGGAGTCCAAGTCTAGTATGAATTCTTCTCAGGGTTCTGTTATGCATCGAGATCAAGTGGGAGACTTATCCATTGTAGTTGTACGTGGTGGAAATGGAAAGTTTGATTCTACACTGAATGAATCGAGTAAGCATAATGACGATGTTCAGAAGAATTTAATCAAAGGGTTGTCTGCAGATGAAAGTGTCACTGTTAATGTAAGTAATGTATACTCCCATTTTTCGAGGTTATAGATGTATATGCTTATGTACTTTTTGAGATCGATCATATGTCACTCGTCTAATTTCATCTCTGTTTTTTATTTTACCAAAAATCACATTGATGATTGATTACCATTCTACTTCATATTTTACTGATAGCATCTCCAAAATACCCCTCATTTAATTTAACTTTATGTATTTTCAATGAATCAATTTATTTGTCATGAAGGGTAATTTATTTGTCATGAAGGGTAATTTAGCCAATAGATTGAATGTTAAATGAATCAATTTATTTGTCATGAAGGGTAATTTAGCCAATAGATTAAATGTGATCAACTACTTTTCTTAATACGCGTAATTTGGTCTAATTTTGCTTATACTTCACTCCTAAAAAACTCTTCATCCTTCCATGTGATTTTGTTGTCTTTGTATTTCATGATACATACATGATTCTATCTACTCTTAGTTCATTGAAATTCTAAAATTAGTGATGAATTGGTTTTGAACTTGGGTGGTTAGAATATTTCTATATGAAAGATACTAAGATGAGGTTTTTTTTTTGGCATTTTTTATGACAGGACACTTCTTCCTTGGCCGTAGTTGTTGTTCACCACTGTGGATATACAGCTACAGTGAAGGCTGTTGGTAATGCGAATGCAAGGAAACCTAAAGTTCAGGATATCGAAATAGATGATCAACCAGAAGGAGGCGCAAATGCTCTTAACATCAATAGGTTTGAACATTAAGCTATTCTAAGATTGCATATCAATTCTGGTTAAACATTTGGATTTAATTGGTATTCACTGTCGATGTGAAGAGTTTTACAATGTCATTCGATTGTAATCATTGGATCATTAAATATCTCAGTTTACTTAAATGACCATTTTTAAAGTCACAGATACGATAGGTTGTGATTGATTGATAGTGACAAAAGTGTTACACTAACAGTGCATTAAAATTAAACTCAAATCATTTTATTAACAATAAAAAAGTTATGGTGAGGCTTACAACACTTTTTATGATGTTTGTAGTTTGAGGGCACTGCTTCACAAATCTGGAGCTGATTCATCAGAAGGGACTTTGACGTCCTTGTCAAATTTTGATGACTTGGATGCTTCTAAAGATCTTGTTAGGAAGGTGGTTGAGGAATCCATCGAAAAGATAAAGGAAGAGCCAAGTGTTTCAAAACGGTCGATTCGATGGGAACTTGGTTCTTCTTGGATGCAGCATCTGCAAAAACAGGAAAATTCAACCGATGGCAGTTCCAATAACAAGGATGGAAGTAATGTCGAGCCAGCCGTGAAAGGTCTTGGAAAGCAATTTAAATTATTGAAGAAGAGGGAAAAGAAACCAAGTGACATAAATTGTGCAGAGGAGCAAAATAACGATGAGCCAAATAACGATGAACCAAGTAGTTTGAATGAATTAGAGAAACTACTTTCTCCAGAAGCCTTTTTGCGTCTCAAAGAATCTGGATCTGGTCTTCATATGAAGGTTTGTGGTATACTTTGTAGATTGTGATACTTTATTTTAGGTGTATTTTCTTGTTGTCATTTGTTTTACTTGAAAATATGTATGTCACTTCTCTTGTAATTATGCTAATTCTCTTTTTTTTATTTTTTTTTATTTTCTTATTTATCGTACATTGTAAATTTGCTATGTTGATGTTTATGATGTGTTTTTTATATTTTTATATCTGATTTTCAATTTGTATCTTCCTGCAACAGACGGTGGATGAGCTTATCAACATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGTAATGTTACATTATTCAATGGACTCTACATTCCTTAAATAACTTGAATGTTGTTTCCATGGATTAAGAACTGAGGAGTGTGTTACTTTTTTAGGTTACGGACTTTGGATCACTTGAACTTTCTCCTGTTGATGGTCGTACACTTACTGATTTCATGCATTTAAGAGGACTAAAGATGGGATCTTTGGGTGAAGTGGTGAGAATTTTTCTCTTCATCCTTGGTTATAGAAAAAGTATATTTTGAATGAATGTTAAAATGTTTTAAGCTATAGTTTCAAATTTACTTTTGTAAACTAAATACCGTGTCTAGTTATACTAACTAGTTTTTGTAATTTAACATTTGTTTTTTTTTTTTTTTTTTTTGTTCTAATCTCATGTATGAATCAGGTTAAACTTTCAGAGAATCTTCCACACATACAATCACTTTGTATTCATGAGATGATTACTCGAGCATTCAAGCATCTACTTAAAGCAGTCATTGCTTCTGTAGACAATGCAGCAGATTTACCTTCAGTCATTGCCTCGACACTGAATTTTTTTCTTGGAGGGTGTCAAACTGAAGATACAGACCAAACTTTGGGTGATGATTATCATCTCAAAATTCATTGGTTACGTATGTTTTTGTCAAAAAGATTTGGATGGACATTAAAAGATGAATTTCAACATTTGAGAAAGTTATCTATTCTTAGAGGGCTCTGTCACAAGGTATCAGTTGGTTCTCTTGATCACTTATTATATCTTTTTACACGACTCTTTTATTGATTTCAGATGTTATTTTGTTTTCTTCAGGTTGGATTAGAATTGTTCCCTAGAGATTATGACATGGAGTCCCCTAAGCCCTTTGGAAAGTATGATATTATCAGCCTTGTTCCCGTTTGCAAGGTGTGATTTTGTTAATGTATCAGTCACAAGTCCATTTTAAGAATAATTCATTAATTATGATCTCATTATACAACATATTTACCAACAAGATCATATTTTACTTTACAGCATGTGGGATGCTCCTCAATAGATGGACGCAATTTATTGGAATCATCGAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTTAGTTATGGAACAAAGGTAATCATCAATTCCTTGGAACGAACCATTTAGTGTTTTTTATAAACATGGCACATAGTTTGACATTACTATCATATTACAGGCATTAGCAAAGATGATGACTGTTTGTGGTCCATATCATCGAAATACTGCAAGTGCGTATAGTCTTCTTGCTGTGGTTCTCTACCACACAGGAGATTTTAACCAGGTAAATTACACTTGTCAGATTTTAGTCCCAGATACTATAGAATTCTGATATTTATGGTTTAATTTTTCCTGATACTAGTTTTAGACTAGCAATGATAGAAACAGAGTTTTTTTAGACTAGCGATGATAGAAACAGAGTTTTTTTCTTAAGCTGCCAAGTTATAAGGGAAAAAAGAGGTAAGAAAGGATAAAGGAAAAAATATGTTGTACCTATATATGGTCCTGTATGTGTATGTTTGGTGGATCCAATGTTGTCAATAACGGATCACAGAAATAGCTATTTGTTCAAATTCTGCTACAATACAGTCCTATAGCACTGGTATAACCACTATTTGACAAAACTTTGTACTTGCACCATTATAGCAGCTACTTGAAAATACCGGGTGGACCTGTGCCAATTTTATGTAGAAAATAACTGAAGGTTTAGTATTTATATTTAATCTTCATTATACTGTCTTTTATTCAGGCCACCATTTATCAGCAAAAGGCGTTGGATATAAATGAGAGGGAGCTTGGACTTGACCATCCTGACACAATGAAAAGCTATGGGGATCTTTCTGTTTTCTATTACCGTCTGCAACATATTGAGCTGGCTCTGAAGTAAGTAAAGCTTTGCTGAATTGGATTAGTTGTTTGTTTCATGAATTTCTGTTCATTATTATGAAACTTACCATGTTCTCATTAAACTTAATGCATATTTTGATAGGTACGTTAATCGCGCTCTCTTCCTCCTACATTTCACATGCGGTCTGTCTCATCCAAATACAGCTGCTACATATATAAATGTTGCTATGATGGAAGAAGGCATGGGAAATGTTCATGTGGCACTTCGGTACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTGGGAGCAGATCATATACAGGTCTCTCTATCTTTCATTTATTTAACTTTGTTTCCCACTGGAGAACATTGTTTTATAATGTATTTTTCATCTATAGACTGCTGCAAGCTATCATGCCATAGCCATAGCACTTTCATTGATGGAAGCATATTCTCTGAGTGTGCAACATGAGCAAACTACACTTAAGATACTTCAGGCGAAGCTTGGCACAGAAGATCTTCGAACTCAGGTCATTTCCCTTTCTTCTATTATTAGCAGTGAATCTCAAAGATTATGCAGTTAGATACTATTAGATTGTAAGATGTATTATAATATTTTTGATATCTTTGATATTATATTAGAGTATCTTAGTTTATTTCCTAGGATCAGTTTATATAAGCTTAGAGTATCTCTTAGGATTAGTTTTTTTTCTTGTTATGATTTATTACCTGATTTCCGTATTTATTTAGGATTGAGTCTATCTATGTATTCCTTTTAAATTGGGATTAATGTTTAGCCTTTTGTATTAAGTCAACATCAAGCTGTTATCGATAAAATTTGAGCTTTTATTTTTTATCTCCTCTGTAAACCTCACAACTTCATCATATACTCTAATTGCCATAATATAGAATTAGTAAATAATATTGGATAGTGTTAACAATTTTTTAAATTTGGAAATTTCGCCAATGCAGGACGCGGCTGCATGGCTAGAATATTTTGAATCAAAAGCTATAGAGCAGCAAGAAGCAGCAAAAAATGGAACTCCAAAGACAGACACATCCATTGCAAGTAAAGGTCACCTTAGGTACTGACCTTAAATCCCTTTATTATTGTTTTCCAAATAAATAGGTTATATTATTTGCTACAAAAATATGTGAATATGTTTTCATGTAGTGTGTCAGATCTCCTGGATTTTATTAGTCCTGACAACGATTCAAAGGGAAATGATGCTCAACGGAAACAAAGGCGTCCAAAGGTGAGGAAATATATATTTTTTCATGTTTATTTATTCTTAACATAAAATCTACTTGGATTTTCCCTTTGAGGGCATGCTTGTAAACTTGGGATTCATTTCAGTTTTGATCATATTTATACTATATTCTGATGGCATGCTAAGGTAACACATGCTTTGTTCTTTAATAAATACTTGTATAAGGTAAACAAGGAAGACTATGTTACAAAGATTGGGAGTTTTTACATTTATTAAAGTCAACTGTGAAGGACATTCAACCTATTACATTCTTTTTTGGAGTTAGCTTATATTTCTAGGTGAAGCTCTGAGAGTTTGATAAGTTTCAAATCAAAACTAATTCTGAAAACCTTTTATGTCACTTTTATATGTGATTTTTTCAGATACTTCCAGTAAGTGATAACAACTCTCAAGAACACGATGATGCTGCAATAGTTGATGATGTCGTTATTGTTGACAATGCAAAAGATGCCACAAAAGCAGTAGAAGGCAAAATAGAAGAAACAAAAGCCAAACATGGAACCGAAGAACCAAAAAAAATTGTTGATCTCAGCATGCACAAGCCAGTGGTGACAGTTGAAGCTGTTTATGAGACATCATCTGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGCGTTCAGGTAACGCTGCTAATCGCAAGTCTGGACGCAGACAACGGCCTCTTCTATCAAAGCTCACTGTTAATGGTTCTGATAATCACATGTACAAGGAAGCCAGTTACAGGAATGACACAACCCTGCACCAAAAAGCAGCTCCAAAAGTAGCTTCAGCTATGTTATCTCCATCTAGAAAATCAAAAACACCAAAAGCTTTGTCATCTAAAATTTCATCAACTCCAGCATCATTGAGTTCTTTGGCCTCAAAGTCTATATCTTACAAAGAAGTCGCTGCTGCACCACCAGGTACAGTTTTAAAGCCATTGTTGGAAAAAACCGAGACAGAAAAGGTAAATGATGAAAATGAGATGCCGAAAAATGAAGGTTCTATCGAAACTTCTAATGCTGATACAGTTCCACAAAAAGATGAAAAAGAACCTTCTGATGCTGATACAGATCCACAACAAGATGAATCTGAACAAGATAACTCTTCATCAGAACTTGAGAAGGTTTCCCCTTCATCTGATCAAGCAAAATCTTCCGAAACAAATGGAAGCAAGCTTTCTGCTGCAGCCAAACCTTTCAGCCCAGGAACGTTGTCCGCGTCTCGCCATTTAAGTCCAGTTCCTCTCGCGAGCATATATGATGCAAATGGGAGTCAAGGCATTCTTGTAGAGCCTGTTCTTCCTCCTGCTGCTGCCAGGGTCCCTTGTGGCCCTAGATCACCGTTGTATTACAGAACCAATTATACATTCCGCATGAAACACAGTTCGACCAAAATAAGGGAAATGAGTGGATCAGGTGGTCCGAAAATTATGAATCCACATGCTCCTGAGTTTGTTCCAAGAAGTGCTTCTCAAGTAGAAAATGGTGAAAAGAACAGTGCCTCCAAAAACTGTCTTTCTGAATCCGAGAAGTCAGAGATAGCAAGGCAGATATTGCTGAGTTTTCTAGTGAAGTCTGTTCATCAAAATGCTGATGCTGTGGATGAGCCTAAAGTTAGTGAAGGAAAAGTTGAGAACTTTGAAAACTCTTCTGATGAAGTAGCTAAAGACAGCGCTGTCATAAAAATAATGTACGGTACTGAGGAAAAGAATAAGACAGTAGTTAATTCCAGCGATGACAGTGAAGAGCAGGACAATTTAGATGGTGAAGGATTTGTAGTTGTCACAAACAGGAGAAAAAGCAGGCAAAAAACCACAAATGGAGTCGCTGAATTGTACAACCAGCCGTCAATTTGTGCTTCGGTTCGTTGA
Protein sequence

>MS.gene060837.t1

MAPKSGKGKTNKAKTEKKKKEEKAVAPSLVDIIVVTPYDSQIVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGQRLNDRVEVVTLKPCLLRMVEENYNEESQATTHVRRLLDIIACTTKFGKPKRNIAGPDSSKPKKNGKAHNQNKSGLSPPVTPNGETRVGSPMSEPPASPISENVGMVAIHPTPKLSDFYEFFSFSNLTPPILHLKKCELKEEDDRGKGDYFQLQVKISNGKVIEVVASEKGFYSVGKLSLQSHTLVDLLQQLSRGFANAYGSLMKAFADRNKFGNLPYGLRSNTWLVAPSVGESLSNFPALPAEDENWGGNGGGQGRNGEYERRPWATDFEILASLPSKTEEERVIRDRKAFLLHNQFVDTSIFKAVAAIQHVMESKSSMNSSQGSVMHRDQVGDLSIVVVRGGNGKFDSTLNESSKHNDDVQKNLIKGLSADESVTVNDTSSLAVVVVHHCGYTATVKAVGNANARKPKVQDIEIDDQPEGGANALNINSLRALLHKSGADSSEGTLTSLSNFDDLDASKDLVRKVVEESIEKIKEEPSVSKRSIRWELGSSWMQHLQKQENSTDGSSNNKDGSNVEPAVKGLGKQFKLLKKREKKPSDINCAEEQNNDEPNNDEPSSLNELEKLLSPEAFLRLKESGSGLHMKTVDELINMAHKFYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMGSLGEVVKLSENLPHIQSLCIHEMITRAFKHLLKAVIASVDNAADLPSVIASTLNFFLGGCQTEDTDQTLGDDYHLKIHWLRMFLSKRFGWTLKDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKYDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGTEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKILPVSDNNSQEHDDAAIVDDVVIVDNAKDATKAVEGKIEETKAKHGTEEPKKIVDLSMHKPVVTVEAVYETSSDEGWQEANSKGRSGNAANRKSGRRQRPLLSKLTVNGSDNHMYKEASYRNDTTLHQKAAPKVASAMLSPSRKSKTPKALSSKISSTPASLSSLASKSISYKEVAAAPPGTVLKPLLEKTETEKVNDENEMPKNEGSIETSNADTVPQKDEKEPSDADTDPQQDESEQDNSSSELEKVSPSSDQAKSSETNGSKLSAAAKPFSPGTLSASRHLSPVPLASIYDANGSQGILVEPVLPPAAARVPCGPRSPLYYRTNYTFRMKHSSTKIREMSGSGGPKIMNPHAPEFVPRSASQVENGEKNSASKNCLSESEKSEIARQILLSFLVKSVHQNADAVDEPKVSEGKVENFENSSDEVAKDSAVIKIMYGTEEKNKTVVNSSDDSEEQDNLDGEGFVVVTNRRKSRQKTTNGVAELYNQPSICASVR