Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07152.t1 | 4G78_A | 98.6 | 148 | 2 | 0 | 1 | 148 | 4 | 151 | 4.70E-75 | 290.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07152.t1 | Q9ZNV9 | 55.9 | 136 | 60 | 0 | 6 | 141 | 8 | 143 | 2.1e-39 | 163.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07152.t1 | G7I2T8 | 98.6 | 148 | 2 | 0 | 1 | 148 | 1 | 148 | 3.4e-75 | 290.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052040 | MS.gene07152 | 0.821329 | 4.28E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07152.t1 | MTR_1g089130 | 98.649 | 148 | 2 | 0 | 1 | 148 | 1 | 148 | 2.08e-107 | 302 |
| MS.gene07152.t1 | MTR_1g082290 | 49.645 | 141 | 71 | 0 | 1 | 141 | 4 | 144 | 4.28e-52 | 162 |
| MS.gene07152.t1 | MTR_7g114020 | 51.471 | 136 | 65 | 1 | 7 | 141 | 6 | 141 | 5.72e-50 | 157 |
| MS.gene07152.t1 | MTR_2g020770 | 55.245 | 143 | 64 | 0 | 3 | 145 | 5 | 147 | 9.77e-50 | 156 |
| MS.gene07152.t1 | MTR_2g020770 | 53.676 | 136 | 63 | 0 | 3 | 138 | 5 | 140 | 2.59e-46 | 147 |
| MS.gene07152.t1 | MTR_2g100900 | 40.769 | 130 | 77 | 0 | 5 | 134 | 7 | 136 | 1.10e-35 | 120 |
| MS.gene07152.t1 | MTR_2g100880 | 40.769 | 130 | 77 | 0 | 5 | 134 | 7 | 136 | 2.74e-35 | 120 |
| MS.gene07152.t1 | MTR_2g103870 | 47.761 | 134 | 67 | 2 | 13 | 143 | 18 | 151 | 8.08e-30 | 106 |
| MS.gene07152.t1 | MTR_4g010160 | 48.872 | 133 | 63 | 3 | 15 | 143 | 8 | 139 | 7.61e-25 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07152.t1 | AT3G29350 | 54.286 | 140 | 63 | 1 | 3 | 141 | 7 | 146 | 2.82e-52 | 163 |
| MS.gene07152.t1 | AT1G03430 | 52.703 | 148 | 69 | 1 | 3 | 149 | 8 | 155 | 8.86e-52 | 162 |
| MS.gene07152.t1 | AT5G39340 | 52.703 | 148 | 69 | 1 | 3 | 149 | 7 | 154 | 1.63e-50 | 159 |
| MS.gene07152.t1 | AT5G39340 | 52.703 | 148 | 69 | 1 | 3 | 149 | 40 | 187 | 5.22e-50 | 158 |
| MS.gene07152.t1 | AT5G39340 | 52.703 | 148 | 69 | 1 | 3 | 149 | 56 | 203 | 1.16e-49 | 158 |
| MS.gene07152.t1 | AT5G39340 | 52.703 | 148 | 69 | 1 | 3 | 149 | 56 | 203 | 1.16e-49 | 158 |
| MS.gene07152.t1 | AT1G03430 | 54.887 | 133 | 59 | 1 | 3 | 134 | 8 | 140 | 1.68e-49 | 156 |
| MS.gene07152.t1 | AT3G21510 | 55.474 | 137 | 61 | 0 | 5 | 141 | 7 | 143 | 8.72e-48 | 152 |
| MS.gene07152.t1 | AT3G16360 | 49.587 | 121 | 61 | 0 | 14 | 134 | 11 | 131 | 4.04e-42 | 137 |
| MS.gene07152.t1 | AT3G29350 | 55.556 | 108 | 47 | 1 | 3 | 109 | 7 | 114 | 9.29e-41 | 132 |
| MS.gene07152.t1 | AT3G16360 | 49.580 | 119 | 60 | 0 | 18 | 136 | 9 | 127 | 1.45e-40 | 132 |
| MS.gene07152.t1 | AT1G80100 | 47.015 | 134 | 68 | 2 | 13 | 143 | 18 | 151 | 5.54e-24 | 91.3 |
| MS.gene07152.t1 | AT1G80100 | 43.704 | 135 | 75 | 1 | 1 | 134 | 6 | 140 | 1.27e-21 | 85.5 |
| MS.gene07152.t1 | AT4G04402 | 38.060 | 134 | 72 | 3 | 19 | 141 | 24 | 157 | 5.40e-20 | 81.3 |
| MS.gene07152.t1 | AT1G80100 | 42.857 | 133 | 53 | 3 | 13 | 143 | 18 | 129 | 1.90e-17 | 73.9 |
Find 16 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTTAAATACCTATTTA+AGG | 0.205789 | 1.4:-71045494 | MS.gene07152:intron |
| TTAAGAAAACTCACCCTTCC+AGG | 0.303814 | 1.4:+71046965 | None:intergenic |
| TAACAGTACATACCTTAAAT+AGG | 0.333879 | 1.4:+71045482 | None:intergenic |
| ATAACCTCAATCACAAAATC+AGG | 0.417121 | 1.4:+71047708 | None:intergenic |
| CGAAGCTGCTATGTTTCAAC+AGG | 0.430572 | 1.4:-71047951 | MS.gene07152:intron |
| TGCTCATGCCCATCAACAAA+AGG | 0.448350 | 1.4:-71047162 | MS.gene07152:CDS |
| ATGTCTGCAACAATTGCAAC+AGG | 0.460807 | 1.4:-71045536 | MS.gene07152:CDS |
| GCAGCTGCAACAAGAAATCA+AGG | 0.482473 | 1.4:-71045354 | MS.gene07152:intron |
| TCTATTTGTTTAAAATTCAC+AGG | 0.488923 | 1.4:+71047185 | None:intergenic |
| GTTGAAACATAGCAGCTTCG+TGG | 0.501753 | 1.4:+71047954 | None:intergenic |
| TGCGAGGCTCAGAACCTGGA+AGG | 0.534171 | 1.4:-71046979 | MS.gene07152:CDS |
| GCTCATGCCCATCAACAAAA+GGG | 0.561552 | 1.4:-71047161 | MS.gene07152:CDS |
| TCTTGTGTGAATAGATCTAA+CGG | 0.595771 | 1.4:+71045328 | None:intergenic |
| GCGAGGCTCAGAACCTGGAA+GGG | 0.598860 | 1.4:-71046978 | MS.gene07152:intron |
| AACACATGGATCACTTACAT+AGG | 0.611392 | 1.4:-71047988 | None:intergenic |
| AACAAAAGGGAAGCAGTGCT+AGG | 0.617678 | 1.4:-71047148 | MS.gene07152:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGAATACAAAAAAAA+AGG | + | chr1.4:71045439-71045458 | None:intergenic | 10.0% |
| !! | AATAAGAATACAAAAAAAAA+GGG | + | chr1.4:71045438-71045457 | None:intergenic | 10.0% |
| !! | AACATCTTAATCAATTAAAA+AGG | - | chr1.4:71045835-71045854 | MS.gene07152:intron | 15.0% |
| !! | AATACAAGCAATATAATATA+CGG | + | chr1.4:71047923-71047942 | None:intergenic | 15.0% |
| !! | ATTTGAAAAAGAAAAATAAC+AGG | + | chr1.4:71047003-71047022 | None:intergenic | 15.0% |
| !! | TATTACTCTCTTTAATTAAT+TGG | - | chr1.4:71045688-71045707 | MS.gene07152:intron | 15.0% |
| !!! | AATTTGATATTATTGGTTAT+TGG | - | chr1.4:71045512-71045531 | MS.gene07152:CDS | 15.0% |
| !!! | ATTTGATATTATTGGTTATT+GGG | - | chr1.4:71045513-71045532 | MS.gene07152:CDS | 15.0% |
| !!! | TCTATTTTATATCAGTTATT+CGG | - | chr1.4:71047574-71047593 | MS.gene07152:intron | 15.0% |
| !!! | TGAAAGTCTAAAATTTAAAA+TGG | - | chr1.4:71047543-71047562 | MS.gene07152:intron | 15.0% |
| !! | AAAGAAAAATAACAGGAATT+AGG | + | chr1.4:71046996-71047015 | None:intergenic | 20.0% |
| !! | AATATAATATACGGAATAGA+TGG | + | chr1.4:71047914-71047933 | None:intergenic | 20.0% |
| !! | AATTATTGAATAATATGTGC+CGG | - | chr1.4:71045906-71045925 | MS.gene07152:intron | 20.0% |
| !! | ATACAAACAAAAACAATTTG+GGG | + | chr1.4:71046859-71046878 | None:intergenic | 20.0% |
| !! | CAATCTTAAATACCTATTTA+AGG | - | chr1.4:71047811-71047830 | MS.gene07152:intron | 20.0% |
| !! | CACATCAATTTATATGTATT+AGG | + | chr1.4:71046919-71046938 | None:intergenic | 20.0% |
| !! | CATACAAACAAAAACAATTT+GGG | + | chr1.4:71046860-71046879 | None:intergenic | 20.0% |
| !! | TAAAGGGTTAAATACTAAAT+AGG | + | chr1.4:71046729-71046748 | None:intergenic | 20.0% |
| !! | TAAATAAAATCTACTTCCAT+AGG | + | chr1.4:71046233-71046252 | None:intergenic | 20.0% |
| !! | TAATAGTAATAGTACTTACA+GGG | + | chr1.4:71045673-71045692 | None:intergenic | 20.0% |
| !! | TCATACAAACAAAAACAATT+TGG | + | chr1.4:71046861-71046880 | None:intergenic | 20.0% |
| !!! | ACAAAAAAAATGTTATTTGC+AGG | - | chr1.4:71047738-71047757 | MS.gene07152:CDS | 20.0% |
| !!! | ATAAATTACTGAAGTGTTAT+TGG | - | chr1.4:71047021-71047040 | MS.gene07152:CDS | 20.0% |
| !!! | ATTTATTTGTTAAACAGTGT+TGG | - | chr1.4:71046260-71046279 | MS.gene07152:intron | 20.0% |
| !!! | TCTATTTGTTTAAAATTCAC+AGG | + | chr1.4:71046123-71046142 | None:intergenic | 20.0% |
| !!! | TCTGATTTGTATTATATGAA+AGG | - | chr1.4:71047313-71047332 | MS.gene07152:intron | 20.0% |
| !!! | TTTGATATTATTGGTTATTG+GGG | - | chr1.4:71045514-71045533 | MS.gene07152:CDS | 20.0% |
| ! | AAGTCAGAATTATAGGTAAA+GGG | + | chr1.4:71046745-71046764 | None:intergenic | 25.0% |
| ! | AATGTTTGTGCAAAACTTTA+CGG | - | chr1.4:71047087-71047106 | MS.gene07152:intron | 25.0% |
| ! | ACATGTAACGAAAAGATTAT+AGG | + | chr1.4:71045382-71045401 | None:intergenic | 25.0% |
| ! | ACTAAACAAATAGAATCTAC+AGG | - | chr1.4:71047368-71047387 | MS.gene07152:intron | 25.0% |
| ! | ATGAATTAAGCTAAAATCAG+TGG | + | chr1.4:71046794-71046813 | None:intergenic | 25.0% |
| ! | ATTATTGAATAATATGTGCC+GGG | - | chr1.4:71045907-71045926 | MS.gene07152:intron | 25.0% |
| ! | GTAATAGTAATAGTACTTAC+AGG | + | chr1.4:71045674-71045693 | None:intergenic | 25.0% |
| ! | GTTTATTGAGAAAGTAGTAT+TGG | - | chr1.4:71047227-71047246 | MS.gene07152:intron | 25.0% |
| ! | TAACAGTACATACCTTAAAT+AGG | + | chr1.4:71047826-71047845 | None:intergenic | 25.0% |
| !! | ATTTCATTTGGTTTATAGGT+AGG | + | chr1.4:71047189-71047208 | None:intergenic | 25.0% |
| !! | TGACATTTCATTTGGTTTAT+AGG | + | chr1.4:71047193-71047212 | None:intergenic | 25.0% |
| !! | TTGATATTATTGGTTATTGG+GGG | - | chr1.4:71045515-71045534 | MS.gene07152:CDS | 25.0% |
| !! | TTTCATTTGGTTTATAGGTA+GGG | + | chr1.4:71047188-71047207 | None:intergenic | 25.0% |
| !! | TTTTCTTTGAATTAGATCCT+CGG | + | chr1.4:71046586-71046605 | None:intergenic | 25.0% |
| !!! | ACTGATTTTAGCTTAATTCA+TGG | - | chr1.4:71046793-71046812 | MS.gene07152:intron | 25.0% |
| ACATCACTACCTATAAATGT+TGG | - | chr1.4:71047704-71047723 | MS.gene07152:CDS | 30.0% | |
| AGATAGCAACAAAATTACTG+TGG | - | chr1.4:71047457-71047476 | MS.gene07152:intron | 30.0% | |
| ATAACCTCAATCACAAAATC+AGG | + | chr1.4:71045600-71045619 | None:intergenic | 30.0% | |
| ATGTTTGTGCAAAACTTTAC+GGG | - | chr1.4:71047088-71047107 | MS.gene07152:intron | 30.0% | |
| CAAGTCAGAATTATAGGTAA+AGG | + | chr1.4:71046746-71046765 | None:intergenic | 30.0% | |
| CTTAAATTCTTTCATGTTCC+CGG | - | chr1.4:71046358-71046377 | MS.gene07152:intron | 30.0% | |
| CTTTACCTATAATTCTGACT+TGG | - | chr1.4:71046744-71046763 | MS.gene07152:intron | 30.0% | |
| GAAAAATAACAGGAATTAGG+AGG | + | chr1.4:71046993-71047012 | None:intergenic | 30.0% | |
| GACTTAGATGACATTTCATT+TGG | + | chr1.4:71047201-71047220 | None:intergenic | 30.0% | |
| GAGTAAAAAAAGGGCAAAAA+AGG | - | chr1.4:71046965-71046984 | MS.gene07152:intron | 30.0% | |
| GATGCATGGAAATATTAAAC+TGG | - | chr1.4:71046059-71046078 | MS.gene07152:intron | 30.0% | |
| GATTATTGTGGACATTTCAT+TGG | + | chr1.4:71047608-71047627 | None:intergenic | 30.0% | |
| GCTAGAGTTAAAAATGTTTG+TGG | - | chr1.4:71046287-71046306 | MS.gene07152:intron | 30.0% | |
| GTGAATACTCCAACATTTAT+AGG | + | chr1.4:71047716-71047735 | None:intergenic | 30.0% | |
| GTTATACCAAAAACTTTCGT+AGG | - | chr1.4:71046019-71046038 | MS.gene07152:intron | 30.0% | |
| TACTACTTTCTCAATAAACG+TGG | + | chr1.4:71047226-71047245 | None:intergenic | 30.0% | |
| TCAAAAGTAGAGAATTGTGT+AGG | + | chr1.4:71047058-71047077 | None:intergenic | 30.0% | |
| TCTTGTGTGAATAGATCTAA+CGG | + | chr1.4:71047980-71047999 | None:intergenic | 30.0% | |
| TGTCCACAATAATCCTTAAA+AGG | - | chr1.4:71047614-71047633 | MS.gene07152:intron | 30.0% | |
| TTTAAGCAGCTAAATGTTTC+CGG | + | chr1.4:71046380-71046399 | None:intergenic | 30.0% | |
| ! | ACCATTGAATACACCTTTTA+AGG | + | chr1.4:71047630-71047649 | None:intergenic | 30.0% |
| ! | GTACTGTTACGTTTCATTTT+CGG | - | chr1.4:71047837-71047856 | MS.gene07152:intron | 30.0% |
| ! | TCAAGCTATTTCGTTAAAGA+CGG | - | chr1.4:71047862-71047881 | MS.gene07152:intron | 30.0% |
| ! | TCCTTAAAAGGTGTATTCAA+TGG | - | chr1.4:71047626-71047645 | MS.gene07152:intron | 30.0% |
| !! | ACACCTTTTAAGGATTATTG+TGG | + | chr1.4:71047620-71047639 | None:intergenic | 30.0% |
| !! | CCCTTTTGAGAGTAAAAAAA+GGG | - | chr1.4:71046956-71046975 | MS.gene07152:intron | 30.0% |
| !!! | CCCTTTTTTTACTCTCAAAA+GGG | + | chr1.4:71046959-71046978 | None:intergenic | 30.0% |
| !!! | CCTTTTTTTACTCTCAAAAG+GGG | + | chr1.4:71046958-71046977 | None:intergenic | 30.0% |
| !!! | CTTTTAGTTTGTTTGATGCA+TGG | - | chr1.4:71046045-71046064 | MS.gene07152:intron | 30.0% |
| AACTTATTCTCAGCGTTCTT+TGG | - | chr1.4:71046681-71046700 | MS.gene07152:intron | 35.0% | |
| AATAGATGGTGTGTATTAGG+AGG | + | chr1.4:71047900-71047919 | None:intergenic | 35.0% | |
| CTCAACACTCATCAAAACAA+TGG | - | chr1.4:71047676-71047695 | MS.gene07152:CDS | 35.0% | |
| GGATTACAAAAGATACTACC+GGG | + | chr1.4:71046654-71046673 | None:intergenic | 35.0% | |
| GGGATTACAAAAGATACTAC+CGG | + | chr1.4:71046655-71046674 | None:intergenic | 35.0% | |
| TACATAGCACAAAAGTTGGA+GGG | - | chr1.4:71045944-71045963 | MS.gene07152:intron | 35.0% | |
| TGTATTAGTGCACTAACCTA+TGG | - | chr1.4:71046214-71046233 | MS.gene07152:intron | 35.0% | |
| TTAAGCAGCTAAATGTTTCC+GGG | + | chr1.4:71046379-71046398 | None:intergenic | 35.0% | |
| ! | AAGTCACCTACGAAAGTTTT+TGG | + | chr1.4:71046028-71046047 | None:intergenic | 35.0% |
| ! | CAATAAGTTGAGAGACACAT+TGG | - | chr1.4:71047433-71047452 | MS.gene07152:intron | 35.0% |
| ! | TAGTCCTGATTTTGTGATTG+AGG | - | chr1.4:71045593-71045612 | MS.gene07152:intron | 35.0% |
| !! | ACGCTGAGAATAAGTTTTAG+AGG | + | chr1.4:71046677-71046696 | None:intergenic | 35.0% |
| !! | CCCCTTTTGAGAGTAAAAAA+AGG | - | chr1.4:71046955-71046974 | MS.gene07152:intron | 35.0% |
| !!! | CGCTGAGAATAAGTTTTAGA+GGG | + | chr1.4:71046676-71046695 | None:intergenic | 35.0% |
| !!! | GAAAGTTTTTGGTATAACCC+AGG | + | chr1.4:71046017-71046036 | None:intergenic | 35.0% |
| !!! | GCCCTTTTTTTACTCTCAAA+AGG | + | chr1.4:71046960-71046979 | None:intergenic | 35.0% |
| !!! | GCTGAGAATAAGTTTTAGAG+GGG | + | chr1.4:71046675-71046694 | None:intergenic | 35.0% |
| AAAAGTTAGTCCAAGAGGTG+AGG | + | chr1.4:71047508-71047527 | None:intergenic | 40.0% | |
| AACTACATCTTGAATCTGCC+CGG | - | chr1.4:71046633-71046652 | MS.gene07152:intron | 40.0% | |
| ACCCTAGGATACGACAATTT+GGG | + | chr1.4:71045988-71046007 | None:intergenic | 40.0% | |
| ACCTCAAAAGTTAGTCCAAG+AGG | + | chr1.4:71047513-71047532 | None:intergenic | 40.0% | |
| ACTTCGACACCAAACATACA+TGG | + | chr1.4:71046518-71046537 | None:intergenic | 40.0% | |
| AGACTTTAATCCTCACCTCT+TGG | - | chr1.4:71047495-71047514 | MS.gene07152:intron | 40.0% | |
| ATGTCTGCAACAATTGCAAC+AGG | - | chr1.4:71047769-71047788 | MS.gene07152:intron | 40.0% | |
| CATATGTCCCCATGTATGTT+TGG | - | chr1.4:71046506-71046525 | MS.gene07152:intron | 40.0% | |
| CGGAATAGATGGTGTGTATT+AGG | + | chr1.4:71047903-71047922 | None:intergenic | 40.0% | |
| CTACATAGCACAAAAGTTGG+AGG | - | chr1.4:71045943-71045962 | MS.gene07152:intron | 40.0% | |
| CTCCTTCACAACTTATCTTG+AGG | - | chr1.4:71046768-71046787 | MS.gene07152:intron | 40.0% | |
| CTTCGACACCAAACATACAT+GGG | + | chr1.4:71046517-71046536 | None:intergenic | 40.0% | |
| GATGAGCAAACAGAAAACGT+AGG | - | chr1.4:71047410-71047429 | MS.gene07152:intron | 40.0% | |
| GGAGTCCAAGTCAGAATTAT+AGG | + | chr1.4:71046752-71046771 | None:intergenic | 40.0% | |
| GTGCTACATAGCACAAAAGT+TGG | - | chr1.4:71045940-71045959 | MS.gene07152:intron | 40.0% | |
| GTTAGTGTCAATATCGTGTC+TGG | + | chr1.4:71045774-71045793 | None:intergenic | 40.0% | |
| TACCCTAGGATACGACAATT+TGG | + | chr1.4:71045989-71046008 | None:intergenic | 40.0% | |
| TTAAGAAAACTCACCCTTCC+AGG | + | chr1.4:71046343-71046362 | None:intergenic | 40.0% | |
| TTCGACACCAAACATACATG+GGG | + | chr1.4:71046516-71046535 | None:intergenic | 40.0% | |
| ! | AAAGCTTTAGCAATCTACCG+AGG | - | chr1.4:71046566-71046585 | MS.gene07152:intron | 40.0% |
| ! | ACCTCTTGGACTAACTTTTG+AGG | - | chr1.4:71047509-71047528 | MS.gene07152:intron | 40.0% |
| ! | ACTGCTTCCCTTTTGTTGAT+GGG | + | chr1.4:71046154-71046173 | None:intergenic | 40.0% |
| ! | CACGTTCAGAAATTTTTGCG+AGG | - | chr1.4:71046310-71046329 | MS.gene07152:intron | 40.0% |
| AACAAAAGGGAAGCAGTGCT+AGG | - | chr1.4:71046157-71046176 | MS.gene07152:intron | 45.0% | |
| CGAAGCTGCTATGTTTCAAC+AGG | - | chr1.4:71045354-71045373 | MS.gene07152:intron | 45.0% | |
| CTAGGATACGACAATTTGGG+CGG | + | chr1.4:71045985-71046004 | None:intergenic | 45.0% | |
| GCAGCTGCAACAAGAAATCA+AGG | - | chr1.4:71047951-71047970 | MS.gene07152:intron | 45.0% | |
| GCCCAAATTGTCGTATCCTA+GGG | - | chr1.4:71045984-71046003 | MS.gene07152:intron | 45.0% | |
| GCTCATCTATCACTGTGTTG+TGG | + | chr1.4:71047397-71047416 | None:intergenic | 45.0% | |
| GCTCATGCCCATCAACAAAA+GGG | - | chr1.4:71046144-71046163 | MS.gene07152:intron | 45.0% | |
| GGCCTCAAGATAAGTTGTGA+AGG | + | chr1.4:71046773-71046792 | None:intergenic | 45.0% | |
| GTTGAAACATAGCAGCTTCG+TGG | + | chr1.4:71045354-71045373 | None:intergenic | 45.0% | |
| TATCCTAGGGTACGATACCT+GGG | - | chr1.4:71045997-71046016 | MS.gene07152:intron | 45.0% | |
| TGCTCATGCCCATCAACAAA+AGG | - | chr1.4:71046143-71046162 | MS.gene07152:intron | 45.0% | |
| ! | CACTGCTTCCCTTTTGTTGA+TGG | + | chr1.4:71046155-71046174 | None:intergenic | 45.0% |
| ! | TATTGGTTATTGGGGGAGCA+GGG | - | chr1.4:71045522-71045541 | MS.gene07152:CDS | 45.0% |
| ! | TTATTGGTTATTGGGGGAGC+AGG | - | chr1.4:71045521-71045540 | MS.gene07152:CDS | 45.0% |
| !! | TTTAATAAATTTGATATTAT+TGG | - | chr1.4:71045505-71045524 | MS.gene07152:CDS | 5.0% |
| CGCCCAAATTGTCGTATCCT+AGG | - | chr1.4:71045983-71046002 | MS.gene07152:intron | 50.0% | |
| GTATCCTAGGGTACGATACC+TGG | - | chr1.4:71045996-71046015 | MS.gene07152:intron | 50.0% | |
| ! | TAACCCAGGTATCGTACCCT+AGG | + | chr1.4:71046003-71046022 | None:intergenic | 50.0% |
| ! | TTTTTGCGAGGCTCAGAACC+TGG | - | chr1.4:71046322-71046341 | MS.gene07152:intron | 50.0% |
| ATTGGGGGAGCAGGGTTATC+TGG | - | chr1.4:71045530-71045549 | MS.gene07152:CDS | 55.0% | |
| GCGAGGCTCAGAACCTGGAA+GGG | - | chr1.4:71046327-71046346 | MS.gene07152:intron | 60.0% | |
| TGCGAGGCTCAGAACCTGGA+AGG | - | chr1.4:71046326-71046345 | MS.gene07152:intron | 60.0% | |
| TGTAGCACGTGTGCGACACC+CGG | + | chr1.4:71045928-71045947 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 71045322 | 71048005 | 71045322 | ID=MS.gene07152 |
| chr1.4 | mRNA | 71045322 | 71048005 | 71045322 | ID=MS.gene07152.t1;Parent=MS.gene07152 |
| chr1.4 | exon | 71047952 | 71048005 | 71047952 | ID=MS.gene07152.t1.exon1;Parent=MS.gene07152.t1 |
| chr1.4 | CDS | 71047952 | 71048005 | 71047952 | ID=cds.MS.gene07152.t1;Parent=MS.gene07152.t1 |
| chr1.4 | exon | 71047654 | 71047784 | 71047654 | ID=MS.gene07152.t1.exon2;Parent=MS.gene07152.t1 |
| chr1.4 | CDS | 71047654 | 71047784 | 71047654 | ID=cds.MS.gene07152.t1;Parent=MS.gene07152.t1 |
| chr1.4 | exon | 71047149 | 71047217 | 71047149 | ID=MS.gene07152.t1.exon3;Parent=MS.gene07152.t1 |
| chr1.4 | CDS | 71047149 | 71047217 | 71047149 | ID=cds.MS.gene07152.t1;Parent=MS.gene07152.t1 |
| chr1.4 | exon | 71046979 | 71047050 | 71046979 | ID=MS.gene07152.t1.exon4;Parent=MS.gene07152.t1 |
| chr1.4 | CDS | 71046979 | 71047050 | 71046979 | ID=cds.MS.gene07152.t1;Parent=MS.gene07152.t1 |
| chr1.4 | exon | 71045495 | 71045567 | 71045495 | ID=MS.gene07152.t1.exon5;Parent=MS.gene07152.t1 |
| chr1.4 | CDS | 71045495 | 71045567 | 71045495 | ID=cds.MS.gene07152.t1;Parent=MS.gene07152.t1 |
| chr1.4 | exon | 71045322 | 71045372 | 71045322 | ID=MS.gene07152.t1.exon6;Parent=MS.gene07152.t1 |
| chr1.4 | CDS | 71045322 | 71045372 | 71045322 | ID=cds.MS.gene07152.t1;Parent=MS.gene07152.t1 |
| Gene Sequence |
| Protein sequence |
