Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052040.t1 | XP_003597464.1 | 99 | 482 | 5 | 0 | 1 | 482 | 1 | 482 | 4.00E-269 | 936.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052040.t1 | G7IUF0 | 99.0 | 482 | 5 | 0 | 1 | 482 | 1 | 482 | 2.9e-269 | 936.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052040 | MS.gene055150 | 0.809588 | 1.76E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene05624 | 0.827815 | 1.27E-54 | -1.69E-46 |
| MS.gene052040 | MS.gene057148 | -0.826865 | 2.15E-54 | -1.69E-46 |
| MS.gene052040 | MS.gene05952 | 0.814054 | 1.87E-51 | -1.69E-46 |
| MS.gene052040 | MS.gene060237 | 0.800083 | 1.70E-48 | -1.69E-46 |
| MS.gene052040 | MS.gene065509 | 0.810337 | 1.21E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene065510 | 0.800626 | 1.32E-48 | -1.69E-46 |
| MS.gene052040 | MS.gene066330 | 0.808169 | 3.53E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene066879 | 0.806041 | 9.97E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene067785 | 0.828561 | 8.40E-55 | -1.69E-46 |
| MS.gene052040 | MS.gene07152 | 0.821329 | 4.28E-53 | -1.69E-46 |
| MS.gene052040 | MS.gene072227 | 0.810002 | 1.43E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene073556 | 0.819248 | 1.28E-52 | -1.69E-46 |
| MS.gene052040 | MS.gene07788 | 0.82661 | 2.47E-54 | -1.69E-46 |
| MS.gene052040 | MS.gene07789 | 0.835222 | 1.90E-56 | -1.69E-46 |
| MS.gene052040 | MS.gene21437 | 0.802114 | 6.54E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene21546 | 0.811216 | 7.82E-51 | -1.69E-46 |
| MS.gene052040 | MS.gene24408 | 0.867919 | 9.59E-66 | -1.69E-46 |
| MS.gene052040 | MS.gene24824 | 0.803857 | 2.85E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene27204 | 0.805897 | 1.07E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene30961 | 0.80914 | 2.19E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene31072 | 0.960147 | 3.14E-118 | -1.69E-46 |
| MS.gene052040 | MS.gene36100 | 0.820592 | 6.32E-53 | -1.69E-46 |
| MS.gene052040 | MS.gene36268 | 0.812567 | 3.97E-51 | -1.69E-46 |
| MS.gene052040 | MS.gene36749 | 0.850706 | 1.43E-60 | -1.69E-46 |
| MS.gene052040 | MS.gene39698 | 0.808845 | 2.54E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene39743 | 0.806185 | 9.30E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene41704 | 0.826043 | 3.37E-54 | -1.69E-46 |
| MS.gene052040 | MS.gene44909 | 0.826429 | 2.73E-54 | -1.69E-46 |
| MS.gene052040 | MS.gene45115 | 0.818729 | 1.68E-52 | -1.69E-46 |
| MS.gene052040 | MS.gene45495 | 0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene45552 | 0.812555 | 4.00E-51 | -1.69E-46 |
| MS.gene052040 | MS.gene46055 | 0.813421 | 2.58E-51 | -1.69E-46 |
| MS.gene052040 | MS.gene48276 | -0.810647 | 1.04E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene51894 | 0.82682 | 2.20E-54 | -1.69E-46 |
| MS.gene052040 | MS.gene51935 | 0.826399 | 2.77E-54 | -1.69E-46 |
| MS.gene052040 | MS.gene55183 | 0.800183 | 1.62E-48 | -1.69E-46 |
| MS.gene052040 | MS.gene59409 | 0.802451 | 5.58E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene62676 | 0.801902 | 7.23E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene66171 | 0.801364 | 9.32E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene67131 | 0.865936 | 4.11E-65 | -1.69E-46 |
| MS.gene052040 | MS.gene67236 | 0.821904 | 3.15E-53 | -1.69E-46 |
| MS.gene052040 | MS.gene68086 | 0.802955 | 4.39E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene68292 | 0.800326 | 1.52E-48 | -1.69E-46 |
| MS.gene052040 | MS.gene69750 | 0.801345 | 9.41E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene72198 | 0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene052040 | MS.gene73236 | 0.812933 | 3.30E-51 | -1.69E-46 |
| MS.gene052040 | MS.gene73393 | 0.806375 | 8.48E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene73644 | 0.835649 | 1.48E-56 | -1.69E-46 |
| MS.gene052040 | MS.gene73783 | -0.804623 | 1.98E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene75415 | -0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene75417 | -0.803815 | 2.91E-49 | -1.69E-46 |
| MS.gene052040 | MS.gene76884 | 0.835023 | 2.14E-56 | -1.69E-46 |
| MS.gene052040 | MS.gene78366 | 0.967425 | 2.93E-127 | -1.69E-46 |
| MS.gene052040 | MS.gene81401 | 0.83004 | 3.67E-55 | -1.69E-46 |
| MS.gene052040 | MS.gene89082 | 0.810048 | 1.40E-50 | -1.69E-46 |
| MS.gene052040 | MS.gene89256 | 0.824273 | 8.82E-54 | -1.69E-46 |
| MS.gene052040 | MS.gene92076 | 0.833135 | 6.34E-56 | -1.69E-46 |
| MS.gene052040 | MS.gene94266 | 0.826429 | 2.73E-54 | -1.69E-46 |
| MS.gene052040 | MS.gene98636 | 0.833366 | 5.56E-56 | -1.69E-46 |
| MS.gene052040 | MS.gene99431 | 0.835225 | 1.90E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052040.t1 | MTR_2g098340 | 98.963 | 482 | 5 | 0 | 1 | 482 | 1 | 482 | 0.0 | 983 |
| MS.gene052040.t1 | MTR_4g065980 | 74.390 | 492 | 113 | 7 | 1 | 482 | 1 | 489 | 0.0 | 731 |
| MS.gene052040.t1 | MTR_3g104820 | 30.102 | 392 | 240 | 11 | 32 | 417 | 19 | 382 | 5.08e-41 | 151 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052040.t1 | AT4G12070 | 62.551 | 494 | 154 | 8 | 3 | 479 | 1 | 480 | 0.0 | 598 |
Find 104 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGCAAATGCAAGCCTTTA+TGG | 0.082855 | 2.2:-4376740 | MS.gene052040:CDS |
| GAAAGAAAGTTACTTGAATT+TGG | 0.144686 | 2.2:+4377193 | None:intergenic |
| AACAGACACTTGTAGATTAT+TGG | 0.210823 | 2.2:-4376320 | MS.gene052040:CDS |
| CATTCGATTGATAAAACTTT+TGG | 0.214288 | 2.2:+4379679 | None:intergenic |
| TTGTTCGAGCAGTTCGTTTA+TGG | 0.226809 | 2.2:-4376685 | MS.gene052040:CDS |
| TTCTCCTCCATGTCTTCCTT+TGG | 0.249282 | 2.2:-4376171 | MS.gene052040:CDS |
| CCGTTTGTGTGACAGATATC+TGG | 0.291353 | 2.2:-4376815 | MS.gene052040:intron |
| AATGTACCTGCTACACGTTC+AGG | 0.296544 | 2.2:-4376367 | MS.gene052040:CDS |
| ATTAATGCAGGTCAAGCTTC+TGG | 0.299561 | 2.2:-4377085 | MS.gene052040:CDS |
| TACTGTCCATTCATCTGCTT+TGG | 0.305858 | 2.2:+4379642 | None:intergenic |
| TGCTACTCTATCTGAAGCTT+TGG | 0.315662 | 2.2:+4377156 | None:intergenic |
| TCTCCTCCATGTCTTCCTTT+GGG | 0.323310 | 2.2:-4376170 | MS.gene052040:CDS |
| TTGCCATCTGAAGTTCAAAT+TGG | 0.332426 | 2.2:-4376076 | MS.gene052040:CDS |
| CTTTGAACGGTGAATTATAT+CGG | 0.349993 | 2.2:+4379554 | None:intergenic |
| ATTTCTCTCTCTCTAGCAAC+TGG | 0.355297 | 2.2:-4375922 | MS.gene052040:CDS |
| GCTACTCTATCTGAAGCTTT+GGG | 0.356630 | 2.2:+4377157 | None:intergenic |
| TTCTTCCCCGACGCATCATT+CGG | 0.367188 | 2.2:+4379412 | None:intergenic |
| AGGAAGACATGGAGGAGAAT+TGG | 0.368027 | 2.2:+4376175 | None:intergenic |
| GTTGAATGCTTTGAGATTCA+AGG | 0.399457 | 2.2:-4379325 | MS.gene052040:intron |
| TGGATGTTCATGAAGACAAT+AGG | 0.400118 | 2.2:+4377058 | None:intergenic |
| TATGAGTTTCATTTGAAAAC+CGG | 0.409910 | 2.2:+4376053 | None:intergenic |
| TTAATGCAGGTCAAGCTTCT+GGG | 0.411481 | 2.2:-4377084 | MS.gene052040:CDS |
| AGCTTTGGGGAGGAGCAATA+TGG | 0.411800 | 2.2:+4377171 | None:intergenic |
| TCGAAGAGGCTCTGATGAAT+TGG | 0.414132 | 2.2:-4379458 | MS.gene052040:CDS |
| TCGGTTGGATCAGAAGCTTC+TGG | 0.416167 | 2.2:+4376016 | None:intergenic |
| GGTAATCCTCAAAACCATAA+AGG | 0.418803 | 2.2:+4376726 | None:intergenic |
| TGAAACCTCGCTAGTGATAT+CGG | 0.425137 | 2.2:+4375997 | None:intergenic |
| ATGGATATGTTTCTTATCCA+TGG | 0.429426 | 2.2:-4377246 | MS.gene052040:CDS |
| TAGTGAGTAGGGACTCAGTT+TGG | 0.440285 | 2.2:+4377038 | None:intergenic |
| ATAGAAAGCTCTCCTCCAAC+TGG | 0.440635 | 2.2:+4376656 | None:intergenic |
| AAAGAAGAAGATTCAAAACT+TGG | 0.442147 | 2.2:-4376620 | MS.gene052040:CDS |
| ATGACCCGAATTATGTTGTC+GGG | 0.457753 | 2.2:-4379366 | MS.gene052040:CDS |
| CCATGGATGGTATCTTCAAC+AGG | 0.458400 | 2.2:-4376265 | MS.gene052040:CDS |
| ATCATTTACCTTAGTGAGTA+GGG | 0.465579 | 2.2:+4377027 | None:intergenic |
| AACATAATTCGGGTCATCAA+TGG | 0.466943 | 2.2:+4379372 | None:intergenic |
| AAAACCCGACAACATAATTC+GGG | 0.468163 | 2.2:+4379362 | None:intergenic |
| TCAGAAGCTTCTGGTGGCAA+TGG | 0.477271 | 2.2:+4376025 | None:intergenic |
| GACCTCTTCAGTACGACTAA+TGG | 0.480305 | 2.2:+4376592 | None:intergenic |
| CATCTGAAGTTCAAATTGGC+CGG | 0.481830 | 2.2:-4376072 | MS.gene052040:CDS |
| CATAAAGGCTTGCATTTGCT+AGG | 0.488507 | 2.2:+4376741 | None:intergenic |
| CGTTTATGGTATGCTCCAGT+TGG | 0.489922 | 2.2:-4376671 | MS.gene052040:CDS |
| GGCAATGGCTGCAGCACAGA+AGG | 0.495943 | 2.2:+4376094 | None:intergenic |
| GTCTGTGCAAGGATAGCTTC+TGG | 0.498058 | 2.2:+4376209 | None:intergenic |
| AGCTTCAAGAAGCAGTAGAA+TGG | 0.500970 | 2.2:-4377299 | MS.gene052040:CDS |
| CTCAAAGTGAAACATGATCA+TGG | 0.501211 | 2.2:-4379743 | None:intergenic |
| ATTGTTCCGAATGATGCGTC+GGG | 0.503672 | 2.2:-4379418 | MS.gene052040:CDS |
| CCATGCATTTGCTCTTGCTA+GGG | 0.506175 | 2.2:+4377108 | None:intergenic |
| CAGAAGCTTCTGGTGGCAAT+GGG | 0.506734 | 2.2:+4376026 | None:intergenic |
| TCTTGCATCCTTCTCTCCCA+TGG | 0.511112 | 2.2:+4377229 | None:intergenic |
| TTATGGTATGCTCCAGTTGG+AGG | 0.512618 | 2.2:-4376668 | MS.gene052040:CDS |
| CTTCCTTTGGGACCGATCGT+TGG | 0.519217 | 2.2:-4376158 | MS.gene052040:CDS |
| CGGCCAATTTGAACTTCAGA+TGG | 0.521290 | 2.2:+4376073 | None:intergenic |
| GAAGTTCCAAAGCAGATGAA+TGG | 0.521349 | 2.2:-4379648 | MS.gene052040:CDS |
| GATGACCCGAATTATGTTGT+CGG | 0.526077 | 2.2:-4379367 | MS.gene052040:CDS |
| GATCATTTACCTTAGTGAGT+AGG | 0.527150 | 2.2:+4377026 | None:intergenic |
| AACTGAGTCCCTACTCACTA+AGG | 0.531054 | 2.2:-4377035 | MS.gene052040:intron |
| TCAAGAAGCGTATAAGAAGA+AGG | 0.533469 | 2.2:-4379503 | MS.gene052040:CDS |
| TCCATGCATTTGCTCTTGCT+AGG | 0.533509 | 2.2:+4377107 | None:intergenic |
| GCAAATGCATGGATTAATGC+AGG | 0.538218 | 2.2:-4377097 | MS.gene052040:CDS |
| ATGTACCTGCTACACGTTCA+GGG | 0.538477 | 2.2:-4376366 | MS.gene052040:CDS |
| TTTCTTATCCATGGGAGAGA+AGG | 0.539848 | 2.2:-4377237 | MS.gene052040:CDS |
| ACAGTAGACATGCTTCAAAC+CGG | 0.541364 | 2.2:-4379625 | MS.gene052040:CDS |
| CGCCATTAGTCGTACTGAAG+AGG | 0.541414 | 2.2:-4376594 | MS.gene052040:intron |
| CCGTTCAAAGGTGGTAGAAG+TGG | 0.544518 | 2.2:-4379541 | MS.gene052040:CDS |
| TGGATATGTTTCTTATCCAT+GGG | 0.548252 | 2.2:-4377245 | MS.gene052040:CDS |
| ACCTCGCTAGTGATATCGGT+TGG | 0.551736 | 2.2:+4376001 | None:intergenic |
| CTTAGCCCTGAACGTGTAGC+AGG | 0.552589 | 2.2:+4376361 | None:intergenic |
| AAGCTCTTCGACTATGTCAC+CGG | 0.557060 | 2.2:+4379606 | None:intergenic |
| AAGAGGCTCTGATGAATTGG+CGG | 0.558613 | 2.2:-4379455 | MS.gene052040:CDS |
| GCTTCTGCTACTGTGAATGC+AGG | 0.560288 | 2.2:-4376785 | MS.gene052040:CDS |
| AACTCTGGTGTGTCTGTGCA+AGG | 0.563105 | 2.2:+4376198 | None:intergenic |
| CAAGGATAGCTTCTGGCTCA+AGG | 0.563411 | 2.2:+4376216 | None:intergenic |
| TATTGTTCCGAATGATGCGT+CGG | 0.564442 | 2.2:-4379419 | MS.gene052040:CDS |
| CGATATAATTCACCGTTCAA+AGG | 0.564917 | 2.2:-4379553 | MS.gene052040:CDS |
| ACAAGGACAAAACTACAAGA+TGG | 0.571738 | 2.2:-4377265 | MS.gene052040:CDS |
| ATGGAGGAGAATTGGAACTC+TGG | 0.573386 | 2.2:+4376183 | None:intergenic |
| GAAATCATGAAATCTGAATG+AGG | 0.576150 | 2.2:+4375940 | None:intergenic |
| CCTGTTGAAGATACCATCCA+TGG | 0.578338 | 2.2:+4376265 | None:intergenic |
| CCCTAGCAAGAGCAAATGCA+TGG | 0.578440 | 2.2:-4377108 | MS.gene052040:CDS |
| CAACACCTATGTCTATTCCA+TGG | 0.584176 | 2.2:+4376705 | None:intergenic |
| ATAGTCGAAGAGCTTCGAAT+CGG | 0.585608 | 2.2:-4379598 | MS.gene052040:CDS |
| TAATGCAGGTCAAGCTTCTG+GGG | 0.594138 | 2.2:-4377083 | MS.gene052040:CDS |
| CTACTCTATCTGAAGCTTTG+GGG | 0.596829 | 2.2:+4377158 | None:intergenic |
| CGTTGGTTAATTCAAGCGGT+GGG | 0.598754 | 2.2:-4376141 | MS.gene052040:CDS |
| ATTTGAACTTCAGATGGCAA+TGG | 0.598877 | 2.2:+4376079 | None:intergenic |
| TCGTTGGTTAATTCAAGCGG+TGG | 0.599562 | 2.2:-4376142 | MS.gene052040:CDS |
| GATTACCATGGAATAGACAT+AGG | 0.600024 | 2.2:-4376710 | MS.gene052040:CDS |
| AGGCTTGAGAGAGATACAGC+TGG | 0.610095 | 2.2:-4375968 | MS.gene052040:CDS |
| ATCGGTCCCAAAGGAAGACA+TGG | 0.611774 | 2.2:+4376164 | None:intergenic |
| CCACTTCTACCACCTTTGAA+CGG | 0.612925 | 2.2:+4379541 | None:intergenic |
| CGATCGTTGGTTAATTCAAG+CGG | 0.619505 | 2.2:-4376145 | MS.gene052040:CDS |
| TAACCAACGATCGGTCCCAA+AGG | 0.619719 | 2.2:+4376155 | None:intergenic |
| GAATGGTAAATGCACTAACA+AGG | 0.621103 | 2.2:-4377282 | MS.gene052040:CDS |
| CTCTATCTGAAGCTTTGGGG+AGG | 0.627339 | 2.2:+4377161 | None:intergenic |
| CGCTTGAATTAACCAACGAT+CGG | 0.631713 | 2.2:+4376146 | None:intergenic |
| TTTCTCTCTCTCTAGCAACT+GGG | 0.634700 | 2.2:-4375921 | MS.gene052040:CDS |
| TATAATTCACCGTTCAAAGG+TGG | 0.646802 | 2.2:-4379550 | MS.gene052040:CDS |
| CTAGCGAGGTTTCACAATCG+AGG | 0.649633 | 2.2:-4375988 | MS.gene052040:CDS |
| ATAATGATTCGAGTTCGAAG+AGG | 0.657808 | 2.2:-4379472 | MS.gene052040:CDS |
| TCCAACCGATATCACTAGCG+AGG | 0.687705 | 2.2:-4376002 | MS.gene052040:CDS |
| GTTGGATCAGAAGCTTCTGG+TGG | 0.702542 | 2.2:+4376019 | None:intergenic |
| TTGTTCCGAATGATGCGTCG+GGG | 0.714999 | 2.2:-4379417 | MS.gene052040:CDS |
| GGTCCCAAAGGAAGACATGG+AGG | 0.715574 | 2.2:+4376167 | None:intergenic |
| TTATCAATCGAATGTCTACG+AGG | 0.747317 | 2.2:-4379670 | MS.gene052040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTCTAGTATTTTTAA+AGG | - | chr2.2:4376504-4376523 | MS.gene052040:intron | 10.0% |
| !!! | ATAATTTTATTGTAATATAC+AGG | - | chr2.2:4379221-4379240 | MS.gene052040:intron | 10.0% |
| !!! | ATTCCAATTTTTTTAAAAAT+TGG | - | chr2.2:4377370-4377389 | MS.gene052040:intron | 10.0% |
| !!! | TAATTTTATTGTAATATACA+GGG | - | chr2.2:4379222-4379241 | MS.gene052040:intron | 10.0% |
| !! | AAAAATTGGACTATAAATAT+AGG | - | chr2.2:4377384-4377403 | MS.gene052040:intron | 15.0% |
| !! | AGTTAATTATAATTAGTTGT+TGG | - | chr2.2:4377884-4377903 | MS.gene052040:intron | 15.0% |
| !! | ATGACATTATAAAAAGTTAT+TGG | + | chr2.2:4377286-4377305 | None:intergenic | 15.0% |
| !! | ATTATAAGGTAATTAATTGT+TGG | - | chr2.2:4377921-4377940 | MS.gene052040:intron | 15.0% |
| !! | TATAATACATATAGTTAAAG+AGG | - | chr2.2:4379171-4379190 | MS.gene052040:intron | 15.0% |
| !! | TTGATTATATAGTGATTATA+AGG | - | chr2.2:4377907-4377926 | MS.gene052040:intron | 15.0% |
| !!! | AGTCCAATTTTTAAAAAAAT+TGG | + | chr2.2:4377376-4377395 | None:intergenic | 15.0% |
| !!! | TAATGAATTTTATCTAAAGA+CGG | + | chr2.2:4376578-4376597 | None:intergenic | 15.0% |
| !! | AAGAATTTCAATTGATTGTA+AGG | - | chr2.2:4378089-4378108 | MS.gene052040:intron | 20.0% |
| !! | AATGTAATTTAATTAGATGC+AGG | - | chr2.2:4377101-4377120 | MS.gene052040:CDS | 20.0% |
| !! | AGATGAATTTCATTTCTATA+TGG | + | chr2.2:4377526-4377545 | None:intergenic | 20.0% |
| !! | AGATGTTATAGATAAATGTT+CGG | - | chr2.2:4377811-4377830 | MS.gene052040:intron | 20.0% |
| !! | ATAGGGTTTAATAAAAGAAA+AGG | + | chr2.2:4377462-4377481 | None:intergenic | 20.0% |
| !! | TTCAAGAACTAACTTAAAAA+AGG | + | chr2.2:4377069-4377088 | None:intergenic | 20.0% |
| !!! | AATTGGTGATTTATTAGATT+CGG | - | chr2.2:4377837-4377856 | MS.gene052040:intron | 20.0% |
| !!! | AGAATAATTTTTACAGTTGA+GGG | - | chr2.2:4376873-4376892 | MS.gene052040:intron | 20.0% |
| !!! | AGGAATTTATTTTTTTGACT+TGG | - | chr2.2:4376828-4376847 | MS.gene052040:intron | 20.0% |
| !!! | ATTCGATTGATAAAACTTTT+GGG | + | chr2.2:4375969-4375988 | None:intergenic | 20.0% |
| !!! | ATTTTTAAAGGTTTTTTCTC+CGG | - | chr2.2:4376516-4376535 | MS.gene052040:intron | 20.0% |
| !!! | CACATTTTAACTTTTAACAA+AGG | + | chr2.2:4377164-4377183 | None:intergenic | 20.0% |
| !!! | CTTGTTTGTTTTAACTTTTA+AGG | - | chr2.2:4376768-4376787 | MS.gene052040:CDS | 20.0% |
| !!! | GAATTTATTTTTTTGACTTG+GGG | - | chr2.2:4376830-4376849 | MS.gene052040:intron | 20.0% |
| !!! | GGAATTTATTTTTTTGACTT+GGG | - | chr2.2:4376829-4376848 | MS.gene052040:intron | 20.0% |
| !!! | TATCTGAATCGAAAAATTTT+AGG | + | chr2.2:4376481-4376500 | None:intergenic | 20.0% |
| !!! | TGTTTTTAGGACAAATATTT+TGG | - | chr2.2:4376931-4376950 | MS.gene052040:intron | 20.0% |
| !!! | TTATTTTCCCTAATTATGAT+TGG | + | chr2.2:4377413-4377432 | None:intergenic | 20.0% |
| ! | AAAGAAGAAGATTCAAAACT+TGG | - | chr2.2:4379026-4379045 | MS.gene052040:intron | 25.0% |
| ! | AAAGGAAATAAAAATGTAGC+GGG | + | chr2.2:4376694-4376713 | None:intergenic | 25.0% |
| ! | AGATAAATGTTCGGTATAAT+TGG | - | chr2.2:4377820-4377839 | MS.gene052040:intron | 25.0% |
| ! | AGATTTACATCATGTCAATT+TGG | - | chr2.2:4377195-4377214 | MS.gene052040:CDS | 25.0% |
| ! | ATTGTAAAAATGTCTCACAT+AGG | - | chr2.2:4378018-4378037 | MS.gene052040:intron | 25.0% |
| ! | ATTTCATTTCTATATGGAGT+AGG | + | chr2.2:4377520-4377539 | None:intergenic | 25.0% |
| ! | CTATATATCTATAGCAAAGT+GGG | + | chr2.2:4377793-4377812 | None:intergenic | 25.0% |
| ! | GAAAGAAAGTTACTTGAATT+TGG | + | chr2.2:4378456-4378475 | None:intergenic | 25.0% |
| ! | GAAAGGAAATAAAAATGTAG+CGG | + | chr2.2:4376695-4376714 | None:intergenic | 25.0% |
| ! | GCTAAATCAATTAGTTAGTT+TGG | - | chr2.2:4376607-4376626 | MS.gene052040:CDS | 25.0% |
| ! | TAACTTAATCAACTAAGCTT+GGG | - | chr2.2:4378666-4378685 | MS.gene052040:intron | 25.0% |
| ! | TAATTCAAAGTTCGATTAAG+AGG | - | chr2.2:4376440-4376459 | MS.gene052040:intron | 25.0% |
| ! | TATATATCTATAGCAAAGTG+GGG | + | chr2.2:4377792-4377811 | None:intergenic | 25.0% |
| ! | TATGAGTTTCATTTGAAAAC+CGG | + | chr2.2:4379596-4379615 | None:intergenic | 25.0% |
| ! | TCTATATATCTATAGCAAAG+TGG | + | chr2.2:4377794-4377813 | None:intergenic | 25.0% |
| ! | TTAACTTAATCAACTAAGCT+TGG | - | chr2.2:4378665-4378684 | MS.gene052040:intron | 25.0% |
| ! | TTAATCGAACTTTGAATTAC+TGG | + | chr2.2:4376439-4376458 | None:intergenic | 25.0% |
| !! | CATTCGATTGATAAAACTTT+TGG | + | chr2.2:4375970-4375989 | None:intergenic | 25.0% |
| !! | GAGAATAATTTTTACAGTTG+AGG | - | chr2.2:4376872-4376891 | MS.gene052040:intron | 25.0% |
| AAAAACCCGACAACATAATT+CGG | + | chr2.2:4376288-4376307 | None:intergenic | 30.0% | |
| AAAGTCAAAACGCAAAAGAA+AGG | + | chr2.2:4376369-4376388 | None:intergenic | 30.0% | |
| AACAAAGTGACATAAATTGC+TGG | + | chr2.2:4377572-4377591 | None:intergenic | 30.0% | |
| AACAACTCACATGATAAGAT+AGG | + | chr2.2:4377480-4377499 | None:intergenic | 30.0% | |
| AACAGACACTTGTAGATTAT+TGG | - | chr2.2:4379326-4379345 | MS.gene052040:CDS | 30.0% | |
| AACCACTTAAGTTACATGTT+TGG | + | chr2.2:4378725-4378744 | None:intergenic | 30.0% | |
| AAGTCTTCAATCAGAAATGT+CGG | + | chr2.2:4378137-4378156 | None:intergenic | 30.0% | |
| AAGTTGCAAACTATGTAATC+GGG | - | chr2.2:4376804-4376823 | MS.gene052040:intron | 30.0% | |
| ACAACTCACATGATAAGATA+GGG | + | chr2.2:4377479-4377498 | None:intergenic | 30.0% | |
| ATAGGACTCCAATCATAATT+AGG | - | chr2.2:4377402-4377421 | MS.gene052040:intron | 30.0% | |
| ATCATTTACCTTAGTGAGTA+GGG | + | chr2.2:4378622-4378641 | None:intergenic | 30.0% | |
| ATGGATATGTTTCTTATCCA+TGG | - | chr2.2:4378400-4378419 | MS.gene052040:intron | 30.0% | |
| CAAGTTGCAAACTATGTAAT+CGG | - | chr2.2:4376803-4376822 | MS.gene052040:CDS | 30.0% | |
| CACACAAAAAAAGACTTAGT+AGG | - | chr2.2:4378642-4378661 | MS.gene052040:intron | 30.0% | |
| CATGTCAATTTGGATACATT+AGG | - | chr2.2:4377205-4377224 | MS.gene052040:CDS | 30.0% | |
| CTTTGAACGGTGAATTATAT+CGG | + | chr2.2:4376095-4376114 | None:intergenic | 30.0% | |
| CTTTGTTGAATGTTGACAAT+AGG | - | chr2.2:4377604-4377623 | MS.gene052040:intron | 30.0% | |
| GAAATCATGAAATCTGAATG+AGG | + | chr2.2:4379709-4379728 | None:intergenic | 30.0% | |
| TAACATGACATACTAACACA+TGG | - | chr2.2:4378802-4378821 | MS.gene052040:intron | 30.0% | |
| TAGAAATCAAACAAATGCAG+CGG | + | chr2.2:4376968-4376987 | None:intergenic | 30.0% | |
| TAGGACTCCAATCATAATTA+GGG | - | chr2.2:4377403-4377422 | MS.gene052040:intron | 30.0% | |
| TGCAGGTGTAAAAATTTACA+CGG | - | chr2.2:4377118-4377137 | MS.gene052040:CDS | 30.0% | |
| TGGATATGTTTCTTATCCAT+GGG | - | chr2.2:4378401-4378420 | MS.gene052040:intron | 30.0% | |
| TTTCTGATTGAAGACTTGTA+AGG | - | chr2.2:4378140-4378159 | MS.gene052040:intron | 30.0% | |
| ! | GAGAATCGAAAACTCATTTT+TGG | - | chr2.2:4378688-4378707 | MS.gene052040:intron | 30.0% |
| ! | GCTGAAATGTACATGTTTTT+AGG | - | chr2.2:4376918-4376937 | MS.gene052040:intron | 30.0% |
| ! | TGTTTGATTTCTATGACTGA+CGG | - | chr2.2:4376975-4376994 | MS.gene052040:intron | 30.0% |
| !! | ATGTTTTTGCCTCAAACAAA+AGG | + | chr2.2:4377635-4377654 | None:intergenic | 30.0% |
| !! | CAACACTAGTTCTATCTAAT+GGG | + | chr2.2:4377992-4378011 | None:intergenic | 30.0% |
| !! | TTATGTCACTTTGTTTGAAC+TGG | - | chr2.2:4377577-4377596 | MS.gene052040:intron | 30.0% |
| AAAACCCGACAACATAATTC+GGG | + | chr2.2:4376287-4376306 | None:intergenic | 35.0% | |
| AAAAGAAAGGAAGTTGAGGT+AGG | + | chr2.2:4376356-4376375 | None:intergenic | 35.0% | |
| AACATAATTCGGGTCATCAA+TGG | + | chr2.2:4376277-4376296 | None:intergenic | 35.0% | |
| ACAAACAAGTACTCCTGTTA+AGG | + | chr2.2:4376757-4376776 | None:intergenic | 35.0% | |
| ACAAGGACAAAACTACAAGA+TGG | - | chr2.2:4378381-4378400 | MS.gene052040:intron | 35.0% | |
| ACATTCGAAGAAGTTTGAGA+AGG | - | chr2.2:4378753-4378772 | MS.gene052040:intron | 35.0% | |
| AGTGGGGATGTAATAAAAAG+TGG | + | chr2.2:4377776-4377795 | None:intergenic | 35.0% | |
| ATAATCGACAAGAGAAGAGA+TGG | + | chr2.2:4379089-4379108 | None:intergenic | 35.0% | |
| ATGAAACTTGTGATGTCACA+TGG | - | chr2.2:4377710-4377729 | MS.gene052040:intron | 35.0% | |
| ATTTGAACTTCAGATGGCAA+TGG | + | chr2.2:4379570-4379589 | None:intergenic | 35.0% | |
| CCATTAGATAGAACTAGTGT+TGG | - | chr2.2:4377990-4378009 | MS.gene052040:intron | 35.0% | |
| CGATATAATTCACCGTTCAA+AGG | - | chr2.2:4376093-4376112 | MS.gene052040:CDS | 35.0% | |
| CTCCAAACATGTAACTTAAG+TGG | - | chr2.2:4378720-4378739 | MS.gene052040:intron | 35.0% | |
| CTTCTTGAAGCTGAAAATTG+TGG | + | chr2.2:4378339-4378358 | None:intergenic | 35.0% | |
| GAAAGAAGAAAGATTTGTCG+TGG | - | chr2.2:4378063-4378082 | MS.gene052040:intron | 35.0% | |
| GAAGTTTGAGAAGGAAGTTT+AGG | - | chr2.2:4378762-4378781 | MS.gene052040:intron | 35.0% | |
| GAATGGTAAATGCACTAACA+AGG | - | chr2.2:4378364-4378383 | MS.gene052040:intron | 35.0% | |
| GATCATTTACCTTAGTGAGT+AGG | + | chr2.2:4378623-4378642 | None:intergenic | 35.0% | |
| GATTACCATGGAATAGACAT+AGG | - | chr2.2:4378936-4378955 | MS.gene052040:intron | 35.0% | |
| GGTAATCCTCAAAACCATAA+AGG | + | chr2.2:4378923-4378942 | None:intergenic | 35.0% | |
| GTGGGGATGTAATAAAAAGT+GGG | + | chr2.2:4377775-4377794 | None:intergenic | 35.0% | |
| GTGTTAGTATGTCATGTTAG+AGG | + | chr2.2:4378801-4378820 | None:intergenic | 35.0% | |
| TATAATTCACCGTTCAAAGG+TGG | - | chr2.2:4376096-4376115 | MS.gene052040:CDS | 35.0% | |
| TGAAACTTGTGATGTCACAT+GGG | - | chr2.2:4377711-4377730 | MS.gene052040:intron | 35.0% | |
| TGAAGTAAATCACGTGAGAA+AGG | + | chr2.2:4376712-4376731 | None:intergenic | 35.0% | |
| TGAATTACTGGAACAGAACT+TGG | + | chr2.2:4376427-4376446 | None:intergenic | 35.0% | |
| TGGATGTTCATGAAGACAAT+AGG | + | chr2.2:4378591-4378610 | None:intergenic | 35.0% | |
| TTATCAATCGAATGTCTACG+AGG | - | chr2.2:4375976-4375995 | MS.gene052040:CDS | 35.0% | |
| ! | ATAATGATTCGAGTTCGAAG+AGG | - | chr2.2:4376174-4376193 | MS.gene052040:CDS | 35.0% |
| ! | GAATTATGTTGTCGGGTTTT+TGG | - | chr2.2:4376287-4376306 | MS.gene052040:CDS | 35.0% |
| ! | GATTCGGTTTGATATTGATC+AGG | - | chr2.2:4377853-4377872 | MS.gene052040:intron | 35.0% |
| ! | TCAAGAAGCGTATAAGAAGA+AGG | - | chr2.2:4376143-4376162 | MS.gene052040:CDS | 35.0% |
| ! | TTGAGAAGGAAGTTTAGGAT+TGG | - | chr2.2:4378767-4378786 | MS.gene052040:intron | 35.0% |
| ! | TTGCCATCTGAAGTTCAAAT+TGG | - | chr2.2:4379570-4379589 | MS.gene052040:CDS | 35.0% |
| ! | TTTCTTCTTTCCTTTTGCGT+GGG | + | chr2.2:4378054-4378073 | None:intergenic | 35.0% |
| !! | CAAACCAAAAAGTACTTCCA+TGG | - | chr2.2:4379364-4379383 | MS.gene052040:CDS | 35.0% |
| !! | CCAACACTAGTTCTATCTAA+TGG | + | chr2.2:4377993-4378012 | None:intergenic | 35.0% |
| !! | GTTGAATGCTTTGAGATTCA+AGG | - | chr2.2:4376321-4376340 | MS.gene052040:CDS | 35.0% |
| !! | TGATAAAACTTTTGGGTCTC+TGG | + | chr2.2:4375962-4375981 | None:intergenic | 35.0% |
| !!! | TATGGTTTTGAGGATTACCA+TGG | - | chr2.2:4378924-4378943 | MS.gene052040:intron | 35.0% |
| !!! | TGACTGACGGCAATTTTTTT+TGG | - | chr2.2:4376988-4377007 | MS.gene052040:intron | 35.0% |
| ACAGTAGACATGCTTCAAAC+CGG | - | chr2.2:4376021-4376040 | MS.gene052040:CDS | 40.0% | |
| ACGCAAAAGAAAGGAAGTTG+AGG | + | chr2.2:4376360-4376379 | None:intergenic | 40.0% | |
| AGCTTCAAGAAGCAGTAGAA+TGG | - | chr2.2:4378347-4378366 | MS.gene052040:intron | 40.0% | |
| ATAGTCGAAGAGCTTCGAAT+CGG | - | chr2.2:4376048-4376067 | MS.gene052040:CDS | 40.0% | |
| ATGACCCGAATTATGTTGTC+GGG | - | chr2.2:4376280-4376299 | MS.gene052040:CDS | 40.0% | |
| ATTAATGCAGGTCAAGCTTC+TGG | - | chr2.2:4378561-4378580 | MS.gene052040:intron | 40.0% | |
| ATTTCTCTCTCTCTAGCAAC+TGG | - | chr2.2:4379724-4379743 | MS.gene052040:CDS | 40.0% | |
| CAACACCTATGTCTATTCCA+TGG | + | chr2.2:4378944-4378963 | None:intergenic | 40.0% | |
| CATAAAGGCTTGCATTTGCT+AGG | + | chr2.2:4378908-4378927 | None:intergenic | 40.0% | |
| CCAGATATCTGTCACACAAA+CGG | + | chr2.2:4378834-4378853 | None:intergenic | 40.0% | |
| CGCTTGAATTAACCAACGAT+CGG | + | chr2.2:4379503-4379522 | None:intergenic | 40.0% | |
| CTAGCAAATGCAAGCCTTTA+TGG | - | chr2.2:4378906-4378925 | MS.gene052040:intron | 40.0% | |
| GAACAGAACTTGGTCGTAAT+TGG | + | chr2.2:4376417-4376436 | None:intergenic | 40.0% | |
| GAAGTTCCAAAGCAGATGAA+TGG | - | chr2.2:4375998-4376017 | MS.gene052040:CDS | 40.0% | |
| GATGACCCGAATTATGTTGT+CGG | - | chr2.2:4376279-4376298 | MS.gene052040:CDS | 40.0% | |
| TACATCATTCATGTGCAGCA+AGG | + | chr2.2:4377738-4377757 | None:intergenic | 40.0% | |
| TACTGTCCATTCATCTGCTT+TGG | + | chr2.2:4376007-4376026 | None:intergenic | 40.0% | |
| TATTGTTCCGAATGATGCGT+CGG | - | chr2.2:4376227-4376246 | MS.gene052040:CDS | 40.0% | |
| TGAAACCTCGCTAGTGATAT+CGG | + | chr2.2:4379652-4379671 | None:intergenic | 40.0% | |
| TGCAAACTATGTAATCGGGA+AGG | - | chr2.2:4376808-4376827 | MS.gene052040:intron | 40.0% | |
| TTAATGCAGGTCAAGCTTCT+GGG | - | chr2.2:4378562-4378581 | MS.gene052040:intron | 40.0% | |
| TTGTTCGAGCAGTTCGTTTA+TGG | - | chr2.2:4378961-4378980 | MS.gene052040:intron | 40.0% | |
| TTTCTCTCTCTCTAGCAACT+GGG | - | chr2.2:4379725-4379744 | MS.gene052040:CDS | 40.0% | |
| TTTCTTATCCATGGGAGAGA+AGG | - | chr2.2:4378409-4378428 | MS.gene052040:intron | 40.0% | |
| TTTGCCTCAAACAAAAGGTG+TGG | + | chr2.2:4377630-4377649 | None:intergenic | 40.0% | |
| ! | ATGAAGCACTAACACAGACA+CGG | + | chr2.2:4378248-4378267 | None:intergenic | 40.0% |
| ! | CATCTGAAGTTCAAATTGGC+CGG | - | chr2.2:4379574-4379593 | MS.gene052040:CDS | 40.0% |
| ! | CGATCGTTGGTTAATTCAAG+CGG | - | chr2.2:4379501-4379520 | MS.gene052040:CDS | 40.0% |
| ! | CTACTCTATCTGAAGCTTTG+GGG | + | chr2.2:4378491-4378510 | None:intergenic | 40.0% |
| ! | CTTTCTTCTTTCCTTTTGCG+TGG | + | chr2.2:4378055-4378074 | None:intergenic | 40.0% |
| ! | GCAAATGCATGGATTAATGC+AGG | - | chr2.2:4378549-4378568 | MS.gene052040:intron | 40.0% |
| ! | GCTACTCTATCTGAAGCTTT+GGG | + | chr2.2:4378492-4378511 | None:intergenic | 40.0% |
| ! | GTCACTTTGTTTGAACTGGT+TGG | - | chr2.2:4377581-4377600 | MS.gene052040:intron | 40.0% |
| ! | TGCTACTCTATCTGAAGCTT+TGG | + | chr2.2:4378493-4378512 | None:intergenic | 40.0% |
| !! | AAAACTTTTGGGTCTCTGGT+TGG | + | chr2.2:4375958-4375977 | None:intergenic | 40.0% |
| !! | CCAAAAAGTACTTCCATGGA+TGG | - | chr2.2:4379368-4379387 | MS.gene052040:CDS | 40.0% |
| !! | TGCAAGCCTTTATGGTTTTG+AGG | - | chr2.2:4378914-4378933 | MS.gene052040:intron | 40.0% |
| !!! | CCATCCATGGAAGTACTTTT+TGG | + | chr2.2:4379371-4379390 | None:intergenic | 40.0% |
| !!! | TTTTGACTTGGGGTGTAAGT+TGG | - | chr2.2:4376840-4376859 | MS.gene052040:intron | 40.0% |
| AAAGAACACACCCACGCAAA+AGG | - | chr2.2:4378041-4378060 | MS.gene052040:intron | 45.0% | |
| AACTGAGTCCCTACTCACTA+AGG | - | chr2.2:4378611-4378630 | MS.gene052040:intron | 45.0% | |
| AAGCTCTTCGACTATGTCAC+CGG | + | chr2.2:4376043-4376062 | None:intergenic | 45.0% | |
| AATGTACCTGCTACACGTTC+AGG | - | chr2.2:4379279-4379298 | MS.gene052040:intron | 45.0% | |
| AGGAAGACATGGAGGAGAAT+TGG | + | chr2.2:4379474-4379493 | None:intergenic | 45.0% | |
| ATAGAAAGCTCTCCTCCAAC+TGG | + | chr2.2:4378993-4379012 | None:intergenic | 45.0% | |
| ATGGAGGAGAATTGGAACTC+TGG | + | chr2.2:4379466-4379485 | None:intergenic | 45.0% | |
| ATGTACCTGCTACACGTTCA+GGG | - | chr2.2:4379280-4379299 | MS.gene052040:intron | 45.0% | |
| ATTGTTCCGAATGATGCGTC+GGG | - | chr2.2:4376228-4376247 | MS.gene052040:CDS | 45.0% | |
| CAGAACTTGGTCGTAATTGG+AGG | + | chr2.2:4376414-4376433 | None:intergenic | 45.0% | |
| CCACTTCTACCACCTTTGAA+CGG | + | chr2.2:4376108-4376127 | None:intergenic | 45.0% | |
| CCATGCATTTGCTCTTGCTA+GGG | + | chr2.2:4378541-4378560 | None:intergenic | 45.0% | |
| CCATGGATGGTATCTTCAAC+AGG | - | chr2.2:4379381-4379400 | MS.gene052040:CDS | 45.0% | |
| CCGTTTGTGTGACAGATATC+TGG | - | chr2.2:4378831-4378850 | MS.gene052040:intron | 45.0% | |
| CCTGTTGAAGATACCATCCA+TGG | + | chr2.2:4379384-4379403 | None:intergenic | 45.0% | |
| CGGCCAATTTGAACTTCAGA+TGG | + | chr2.2:4379576-4379595 | None:intergenic | 45.0% | |
| CGTGTGGCAATAACCTTAAC+AGG | - | chr2.2:4376741-4376760 | MS.gene052040:CDS | 45.0% | |
| CGTTTATGGTATGCTCCAGT+TGG | - | chr2.2:4378975-4378994 | MS.gene052040:intron | 45.0% | |
| GACCTCTTCAGTACGACTAA+TGG | + | chr2.2:4379057-4379076 | None:intergenic | 45.0% | |
| TAATGCAGGTCAAGCTTCTG+GGG | - | chr2.2:4378563-4378582 | MS.gene052040:intron | 45.0% | |
| TACTTCACAGTTCACACGTG+TGG | - | chr2.2:4376725-4376744 | MS.gene052040:CDS | 45.0% | |
| TAGTGAGTAGGGACTCAGTT+TGG | + | chr2.2:4378611-4378630 | None:intergenic | 45.0% | |
| TCCATGCATTTGCTCTTGCT+AGG | + | chr2.2:4378542-4378561 | None:intergenic | 45.0% | |
| TCTCCTCCATGTCTTCCTTT+GGG | - | chr2.2:4379476-4379495 | MS.gene052040:CDS | 45.0% | |
| TGACGTGTCAGTGTTGTGTA+TGG | - | chr2.2:4378219-4378238 | MS.gene052040:intron | 45.0% | |
| TTATGGTATGCTCCAGTTGG+AGG | - | chr2.2:4378978-4378997 | MS.gene052040:intron | 45.0% | |
| TTCTCCTCCATGTCTTCCTT+TGG | - | chr2.2:4379475-4379494 | MS.gene052040:CDS | 45.0% | |
| ! | AAGAGGCTCTGATGAATTGG+CGG | - | chr2.2:4376191-4376210 | MS.gene052040:CDS | 45.0% |
| ! | CGTTGGTTAATTCAAGCGGT+GGG | - | chr2.2:4379505-4379524 | MS.gene052040:CDS | 45.0% |
| ! | TCGAAGAGGCTCTGATGAAT+TGG | - | chr2.2:4376188-4376207 | MS.gene052040:CDS | 45.0% |
| ! | TCGTTGGTTAATTCAAGCGG+TGG | - | chr2.2:4379504-4379523 | MS.gene052040:CDS | 45.0% |
| !! | TAGGCCACACCTTTTGTTTG+AGG | - | chr2.2:4377623-4377642 | MS.gene052040:intron | 45.0% |
| !!! | TCTCCGGTTTTGAGCAAGAT+GGG | - | chr2.2:4376532-4376551 | MS.gene052040:intron | 45.0% |
| !!! | TTCTCCGGTTTTGAGCAAGA+TGG | - | chr2.2:4376531-4376550 | MS.gene052040:intron | 45.0% |
| !!! | TCATTTTATTAAATTATTAT+CGG | - | chr2.2:4378193-4378212 | MS.gene052040:intron | 5.0% |
| !!! | TTTTTTAAGAAAAATATAAA+CGG | + | chr2.2:4377233-4377252 | None:intergenic | 5.0% |
| AACTCTGGTGTGTCTGTGCA+AGG | + | chr2.2:4379451-4379470 | None:intergenic | 50.0% | |
| ACCTCGCTAGTGATATCGGT+TGG | + | chr2.2:4379648-4379667 | None:intergenic | 50.0% | |
| AGGCTTGAGAGAGATACAGC+TGG | - | chr2.2:4379678-4379697 | MS.gene052040:CDS | 50.0% | |
| ATCGGTCCCAAAGGAAGACA+TGG | + | chr2.2:4379485-4379504 | None:intergenic | 50.0% | |
| CAGAAGCTTCTGGTGGCAAT+GGG | + | chr2.2:4379623-4379642 | None:intergenic | 50.0% | |
| CCCTAGCAAGAGCAAATGCA+TGG | - | chr2.2:4378538-4378557 | MS.gene052040:intron | 50.0% | |
| CCGTTCAAAGGTGGTAGAAG+TGG | - | chr2.2:4376105-4376124 | MS.gene052040:CDS | 50.0% | |
| CGCCATTAGTCGTACTGAAG+AGG | - | chr2.2:4379052-4379071 | MS.gene052040:intron | 50.0% | |
| CTAGCGAGGTTTCACAATCG+AGG | - | chr2.2:4379658-4379677 | MS.gene052040:CDS | 50.0% | |
| GCTTCTGCTACTGTGAATGC+AGG | - | chr2.2:4378861-4378880 | MS.gene052040:intron | 50.0% | |
| GTCTGTGCAAGGATAGCTTC+TGG | + | chr2.2:4379440-4379459 | None:intergenic | 50.0% | |
| GTTGGATCAGAAGCTTCTGG+TGG | + | chr2.2:4379630-4379649 | None:intergenic | 50.0% | |
| TAACCAACGATCGGTCCCAA+AGG | + | chr2.2:4379494-4379513 | None:intergenic | 50.0% | |
| TCAGAAGCTTCTGGTGGCAA+TGG | + | chr2.2:4379624-4379643 | None:intergenic | 50.0% | |
| TCCAACCGATATCACTAGCG+AGG | - | chr2.2:4379644-4379663 | MS.gene052040:CDS | 50.0% | |
| TCGGTTGGATCAGAAGCTTC+TGG | + | chr2.2:4379633-4379652 | None:intergenic | 50.0% | |
| TCTTGCATCCTTCTCTCCCA+TGG | + | chr2.2:4378420-4378439 | None:intergenic | 50.0% | |
| TTCTTCCCCGACGCATCATT+CGG | + | chr2.2:4376237-4376256 | None:intergenic | 50.0% | |
| TTGTTCCGAATGATGCGTCG+GGG | - | chr2.2:4376229-4376248 | MS.gene052040:CDS | 50.0% | |
| !! | AGCTTTGGGGAGGAGCAATA+TGG | + | chr2.2:4378478-4378497 | None:intergenic | 50.0% |
| !! | CAAGGATAGCTTCTGGCTCA+AGG | + | chr2.2:4379433-4379452 | None:intergenic | 50.0% |
| !! | CTCTATCTGAAGCTTTGGGG+AGG | + | chr2.2:4378488-4378507 | None:intergenic | 50.0% |
| !! | TGTCGGTGCTACAGAGAAGT+TGG | + | chr2.2:4378120-4378139 | None:intergenic | 50.0% |
| !!! | CTCCGGTTTTGAGCAAGATG+GGG | - | chr2.2:4376533-4376552 | MS.gene052040:intron | 50.0% |
| CGCCCCATCTTGCTCAAAAC+CGG | + | chr2.2:4376538-4376557 | None:intergenic | 55.0% | |
| CTTAGCCCTGAACGTGTAGC+AGG | + | chr2.2:4379288-4379307 | None:intergenic | 55.0% | |
| GGTCCCAAAGGAAGACATGG+AGG | + | chr2.2:4379482-4379501 | None:intergenic | 55.0% | |
| !! | CTTCCTTTGGGACCGATCGT+TGG | - | chr2.2:4379488-4379507 | MS.gene052040:CDS | 55.0% |
| !!! | CGGTTTTGAGCAAGATGGGG+CGG | - | chr2.2:4376536-4376555 | MS.gene052040:intron | 55.0% |
| GGCAATGGCTGCAGCACAGA+AGG | + | chr2.2:4379555-4379574 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 4375916 | 4379752 | 4375916 | ID=MS.gene052040 |
| chr2.2 | mRNA | 4375916 | 4379752 | 4375916 | ID=MS.gene052040.t1;Parent=MS.gene052040 |
| chr2.2 | exon | 4379326 | 4379752 | 4379326 | ID=MS.gene052040.t1.exon1;Parent=MS.gene052040.t1 |
| chr2.2 | CDS | 4379326 | 4379752 | 4379326 | ID=cds.MS.gene052040.t1;Parent=MS.gene052040.t1 |
| chr2.2 | exon | 4377036 | 4377319 | 4377036 | ID=MS.gene052040.t1.exon2;Parent=MS.gene052040.t1 |
| chr2.2 | CDS | 4377036 | 4377319 | 4377036 | ID=cds.MS.gene052040.t1;Parent=MS.gene052040.t1 |
| chr2.2 | exon | 4376595 | 4376822 | 4376595 | ID=MS.gene052040.t1.exon3;Parent=MS.gene052040.t1 |
| chr2.2 | CDS | 4376595 | 4376822 | 4376595 | ID=cds.MS.gene052040.t1;Parent=MS.gene052040.t1 |
| chr2.2 | exon | 4375916 | 4376425 | 4375916 | ID=MS.gene052040.t1.exon4;Parent=MS.gene052040.t1 |
| chr2.2 | CDS | 4375916 | 4376425 | 4375916 | ID=cds.MS.gene052040.t1;Parent=MS.gene052040.t1 |
| Gene Sequence |
| Protein sequence |
