Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071575.t1 | XP_003627371.1 | 73.5 | 1258 | 133 | 19 | 1 | 1067 | 21 | 1269 | 0.00E+00 | 1554.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071575.t1 | O80386 | 29.3 | 205 | 113 | 5 | 1 | 180 | 21 | 218 | 2.6e-11 | 72.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071575.t1 | G7L8C6 | 73.5 | 1258 | 133 | 19 | 1 | 1067 | 21 | 1269 | 0.0e+00 | 1554.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene071575 | 0.80325 | 3.81E-49 | -1.69E-46 |
| MS.gene051067 | MS.gene071575 | 0.901141 | 3.61E-78 | -1.69E-46 |
| MS.gene056228 | MS.gene071575 | 0.807767 | 4.30E-50 | -1.69E-46 |
| MS.gene058197 | MS.gene071575 | 0.801065 | 1.07E-48 | -1.69E-46 |
| MS.gene058198 | MS.gene071575 | 0.801321 | 9.51E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 256 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCTTCCGGGGTTGATTT+TGG | 0.126207 | 8.3:-69618944 | None:intergenic |
| CTTGGGTTTGGGCTTGGTTA+TGG | 0.153240 | 8.3:-69616035 | None:intergenic |
| CCATGGGGACACGGAGTAAA+AGG | 0.183987 | 8.3:+69616910 | MS.gene071575:CDS |
| TCTTCCGTTGTTGGTTTAAA+TGG | 0.187586 | 8.3:+69616738 | MS.gene071575:CDS |
| TGTTAATGATAATAATAATT+TGG | 0.201403 | 8.3:+69616432 | MS.gene071575:CDS |
| GATCATCCCTCAGTTTAAAA+TGG | 0.210298 | 8.3:-69620378 | None:intergenic |
| TTGGGTTTGGGCTTGGTTAT+GGG | 0.217295 | 8.3:-69616034 | None:intergenic |
| AGCCAGGAATCTGGTAATTC+TGG | 0.228359 | 8.3:+69618598 | MS.gene071575:CDS |
| AATTTCTCGGAGCTTAATAT+TGG | 0.242108 | 8.3:+69617504 | MS.gene071575:CDS |
| GGATGTTTGGGCTTGGGTTT+GGG | 0.262884 | 8.3:-69616046 | None:intergenic |
| ACTTTAAATGGTCCCAAGTA+TGG | 0.267678 | 8.3:-69611892 | None:intergenic |
| TTCTGGTAGAAAACAGGTTT+TGG | 0.275254 | 8.3:+69616974 | MS.gene071575:CDS |
| TGGATGTTTGGGCTTGGGTT+TGG | 0.282169 | 8.3:-69616047 | None:intergenic |
| AGTGCAAATATGAATCTTTC+TGG | 0.285893 | 8.3:+69616957 | MS.gene071575:CDS |
| TTTGGGCTTGGGTTTGGGCT+TGG | 0.288759 | 8.3:-69616041 | None:intergenic |
| TTCACCATTTCTAAAACTTC+TGG | 0.289259 | 8.3:-69612132 | None:intergenic |
| GAGGTTGCCACGTGGATGTT+TGG | 0.289865 | 8.3:-69616059 | None:intergenic |
| GATACTTTGCTCCTCTTCAT+TGG | 0.292920 | 8.3:-69618199 | None:intergenic |
| GAGTAAAAGGGATGAGATTC+GGG | 0.297497 | 8.3:+69616923 | MS.gene071575:CDS |
| CACATTCTGTGCAGTCTATC+AGG | 0.298189 | 8.3:+69611933 | MS.gene071575:CDS |
| GCCACGTGGATGTTTGGGCT+TGG | 0.300860 | 8.3:-69616053 | None:intergenic |
| AATCTTCCATATCATATTCT+AGG | 0.311110 | 8.3:-69618483 | None:intergenic |
| ATTTCTCGGAGCTTAATATT+GGG | 0.324140 | 8.3:+69617505 | MS.gene071575:CDS |
| ACTGATCAAGGGTCTTCTTC+TGG | 0.328068 | 8.3:+69616469 | MS.gene071575:CDS |
| GACTCATGCGGGTAAGAAAA+AGG | 0.330755 | 8.3:-69618777 | None:intergenic |
| ATGAGGCGCGCGTGAGTTCC+AGG | 0.333119 | 8.3:-69618754 | None:intergenic |
| GACTCCGTTGAAATTTGATT+TGG | 0.333642 | 8.3:+69618322 | MS.gene071575:CDS |
| GGTAATTCTGGGTCTGAAAT+TGG | 0.335276 | 8.3:+69618610 | MS.gene071575:CDS |
| TCTAATTCCTCTTCCGTTGT+TGG | 0.341703 | 8.3:+69616729 | MS.gene071575:CDS |
| ACAAGATGAAATTGGAAGTA+TGG | 0.344027 | 8.3:+69618528 | MS.gene071575:CDS |
| GAAAACACAAAGCCTTCTTC+TGG | 0.348550 | 8.3:+69618123 | MS.gene071575:CDS |
| CCTGAACCAGCTGTGAGTTC+GGG | 0.351175 | 8.3:+69617423 | MS.gene071575:CDS |
| TTTCTCAAATCAGAGAAGTT+TGG | 0.352015 | 8.3:-69618099 | None:intergenic |
| TTTATTATTACGTCCGTTGT+TGG | 0.354272 | 8.3:-69616121 | None:intergenic |
| GACCTTGATGATTGATCATA+AGG | 0.355912 | 8.3:-69618362 | None:intergenic |
| CGGTGGATAGTCAGAATTAT+GGG | 0.357242 | 8.3:+69617466 | MS.gene071575:CDS |
| AGCTGAAGCTTTGAAGAATC+AGG | 0.361383 | 8.3:+69616815 | MS.gene071575:CDS |
| TCTTGTTGAGTAATGAGTTC+TGG | 0.362227 | 8.3:-69615922 | None:intergenic |
| AGGTTGCCACGTGGATGTTT+GGG | 0.365025 | 8.3:-69616058 | None:intergenic |
| ACAGGGGAACAAGATGAAAT+TGG | 0.368444 | 8.3:+69618520 | MS.gene071575:CDS |
| GCTCCTCTGCGAACTTTAAA+TGG | 0.372307 | 8.3:-69611904 | None:intergenic |
| GAATTCTCGTTCCCTTATCC+AGG | 0.373969 | 8.3:+69618848 | MS.gene071575:CDS |
| GCTTCTATAGATTCTCCTAT+TGG | 0.375336 | 8.3:+69618813 | MS.gene071575:CDS |
| TTGGGCTTGGTTATGGGCTT+CGG | 0.375633 | 8.3:-69616028 | None:intergenic |
| AAGGCAGAGTAAAGGAAATC+AGG | 0.377479 | 8.3:+69617049 | MS.gene071575:CDS |
| CGCTGATGCACGTGTGGAAC+AGG | 0.380367 | 8.3:+69617180 | MS.gene071575:CDS |
| GAAGAGGAATGCTAAACTTC+AGG | 0.380932 | 8.3:+69617566 | MS.gene071575:CDS |
| AATGACGATGTTAAGTTTGA+TGG | 0.381260 | 8.3:+69616576 | MS.gene071575:CDS |
| CCACGTGGATGTTTGGGCTT+GGG | 0.384132 | 8.3:-69616052 | None:intergenic |
| CATCATTCTCACCCTGGATA+AGG | 0.388526 | 8.3:-69618860 | None:intergenic |
| GGACAGAGACTTTGGCTGAT+TGG | 0.392953 | 8.3:+69619013 | MS.gene071575:CDS |
| CTCCTATTGGTAGCCCTGCT+TGG | 0.398520 | 8.3:+69618826 | MS.gene071575:CDS |
| TTCTGAAGGAGATGATGATA+TGG | 0.400701 | 8.3:+69619050 | MS.gene071575:CDS |
| AAGGAAAAGATGATCTCAAA+TGG | 0.401892 | 8.3:-69616788 | None:intergenic |
| ACGGTGGATAGTCAGAATTA+TGG | 0.404942 | 8.3:+69617465 | MS.gene071575:CDS |
| GAATCTTTCTGGTAGAAAAC+AGG | 0.406049 | 8.3:+69616968 | MS.gene071575:CDS |
| ACCCAGAATTACCAGATTCC+TGG | 0.409590 | 8.3:-69618600 | None:intergenic |
| TTGAGTTGAGAGACAGTGTA+AGG | 0.409901 | 8.3:-69614907 | None:intergenic |
| TAGGTCATTGAATTCTTTCT+CGG | 0.411868 | 8.3:-69618464 | None:intergenic |
| TGAGTTGAATCCACTATTCC+AGG | 0.412186 | 8.3:-69617226 | None:intergenic |
| CTGAGGGATGATCATATATC+AGG | 0.416209 | 8.3:+69620388 | MS.gene071575:CDS |
| CAATGACCTAGAATATGATA+TGG | 0.416299 | 8.3:+69618477 | MS.gene071575:CDS |
| AGGGTCTTCTTCTGGACGCT+GGG | 0.418023 | 8.3:+69616477 | MS.gene071575:CDS |
| TGATGCAGAGATGTCTCAAT+TGG | 0.418080 | 8.3:+69612161 | MS.gene071575:CDS |
| TTCAAAGCTTCAGCTTCTAA+AGG | 0.418516 | 8.3:-69616807 | None:intergenic |
| CCCGAACTCACAGCTGGTTC+AGG | 0.420312 | 8.3:-69617423 | None:intergenic |
| GGAGTAAAAGGGATGAGATT+CGG | 0.421145 | 8.3:+69616922 | MS.gene071575:CDS |
| TATGCTAATGCATCAGCATC+TGG | 0.422062 | 8.3:+69614877 | MS.gene071575:CDS |
| TACACATGTAACGGTACCTT+TGG | 0.422345 | 8.3:+69617010 | MS.gene071575:CDS |
| ATCATTCTCACCCTGGATAA+GGG | 0.424961 | 8.3:-69618859 | None:intergenic |
| TCATTCTGAAGGGAATCTAT+AGG | 0.426226 | 8.3:-69617903 | None:intergenic |
| TAATCCTGATGCTAGTTTCT+CGG | 0.430373 | 8.3:-69611863 | None:intergenic |
| TCAGCTCAGTTTGAAGGTAG+TGG | 0.430622 | 8.3:+69616669 | MS.gene071575:CDS |
| GCCTGAACCAGCTGTGAGTT+CGG | 0.430971 | 8.3:+69617422 | MS.gene071575:CDS |
| GGTTATAGACCCTGAAAACT+TGG | 0.434505 | 8.3:-69617676 | None:intergenic |
| GAAACCAGTACCTGCTAGTT+CGG | 0.437323 | 8.3:+69616881 | MS.gene071575:CDS |
| GTTAGTCTGAGCCAGGAATC+TGG | 0.439275 | 8.3:+69618589 | MS.gene071575:CDS |
| AGGATTAGTGAAGCCATACT+TGG | 0.442199 | 8.3:+69611879 | MS.gene071575:CDS |
| CTGTTGAGAGTCCTGTGTCC+TGG | 0.445287 | 8.3:+69618736 | MS.gene071575:CDS |
| TATGGACGATGGCCGAGATC+TGG | 0.447248 | 8.3:+69619068 | MS.gene071575:CDS |
| AAGATAGTCTTGAGCGGAGT+AGG | 0.448279 | 8.3:+69617640 | MS.gene071575:CDS |
| TGGAACAGAATCAGAGAGTA+AGG | 0.450433 | 8.3:+69617030 | MS.gene071575:CDS |
| TTAAAATGGGCGGGAGGTGC+AGG | 0.455887 | 8.3:-69620364 | None:intergenic |
| TCAGGTACACCTCGCACAAC+AGG | 0.457937 | 8.3:+69618018 | MS.gene071575:intron |
| AGGAAAAGATGATCTCAAAT+GGG | 0.458016 | 8.3:-69616787 | None:intergenic |
| GTGTCAATGTCACGTCCATC+TGG | 0.458396 | 8.3:+69618042 | MS.gene071575:CDS |
| CTTCATCCTCTTCATTCTGA+AGG | 0.461063 | 8.3:-69617914 | None:intergenic |
| AACTCGTGGGACAGAGACTT+TGG | 0.462395 | 8.3:+69619005 | MS.gene071575:CDS |
| GCCAGGAATCTGGTAATTCT+GGG | 0.462442 | 8.3:+69618599 | MS.gene071575:CDS |
| AATGTCTTATTTCAGGGGAC+AGG | 0.463253 | 8.3:+69612301 | MS.gene071575:intron |
| AGCTTTGAAGAATCAGGTTA+AGG | 0.464390 | 8.3:+69616821 | MS.gene071575:CDS |
| TGCTGTAAGGCAAAATTTCT+CGG | 0.467310 | 8.3:+69617491 | MS.gene071575:CDS |
| ATGCTAAACTTCAGGAAGAA+TGG | 0.467513 | 8.3:+69617574 | MS.gene071575:CDS |
| GAAGAATCAGGTTAAGGAAG+AGG | 0.467828 | 8.3:+69616827 | MS.gene071575:CDS |
| GTCTAGAAGACCTGGAATAG+TGG | 0.468174 | 8.3:+69617216 | MS.gene071575:CDS |
| TTCCAAGCAGGGCTACCAAT+AGG | 0.468469 | 8.3:-69618828 | None:intergenic |
| AAGCAAACCAACCCGCTCTC+AGG | 0.468923 | 8.3:+69618149 | MS.gene071575:CDS |
| AAGGGTCTTCTTCTGGACGC+TGG | 0.469577 | 8.3:+69616476 | MS.gene071575:CDS |
| GAAGAATTAGCAACAAGATA+AGG | 0.470636 | 8.3:-69618921 | None:intergenic |
| AGACTTGAGGAAGTCGAGAA+TGG | 0.471343 | 8.3:+69619107 | MS.gene071575:CDS |
| GGGGATGGAACAAGAGTAAT+CGG | 0.473196 | 8.3:+69613641 | MS.gene071575:CDS |
| TTTAAAGTTCGCAGAGGAGC+AGG | 0.473418 | 8.3:+69611907 | MS.gene071575:CDS |
| CGCCCTGCCTGTGCCGGCGT+TGG | 0.475839 | 8.3:-69616245 | None:intergenic |
| TTTGTCCTCTTGAACTCAGA+TGG | 0.476035 | 8.3:+69618290 | MS.gene071575:CDS |
| CAGGACACAGGACTCTCAAC+AGG | 0.476046 | 8.3:-69618735 | None:intergenic |
| CTTGTTCCCCTGTGGCCGTA+TGG | 0.477358 | 8.3:-69618510 | None:intergenic |
| TAGAGAGTTGAAGGTGGTGA+AGG | 0.477976 | 8.3:-69616088 | None:intergenic |
| ATTAAAAGCACTATCTTCAA+TGG | 0.481053 | 8.3:-69618551 | None:intergenic |
| TCTCAACGCGCAGATAAACT+TGG | 0.481664 | 8.3:+69617720 | MS.gene071575:CDS |
| ATGACGATGTTAAGTTTGAT+GGG | 0.482204 | 8.3:+69616577 | MS.gene071575:CDS |
| ATCATCCCTCAGTTTAAAAT+GGG | 0.482489 | 8.3:-69620377 | None:intergenic |
| ATGGCCGAGATCTGGCCAAC+CGG | 0.483788 | 8.3:+69619076 | MS.gene071575:CDS |
| TTGTCTCTTCGTTTGCCAGA+TGG | 0.487249 | 8.3:-69618057 | None:intergenic |
| TCCTCAAGTCTTCTGATGAC+CGG | 0.488254 | 8.3:-69619095 | None:intergenic |
| TCACCAACGCCGGCACAGGC+AGG | 0.490050 | 8.3:+69616242 | MS.gene071575:CDS |
| TGTTCCGAACTAGCAGGTAC+TGG | 0.490653 | 8.3:-69616885 | None:intergenic |
| GACTTGAGGAAGTCGAGAAT+GGG | 0.491125 | 8.3:+69619108 | MS.gene071575:CDS |
| CACAGGTTTGTGCGGTATGT+TGG | 0.496046 | 8.3:+69612105 | MS.gene071575:intron |
| GGTGATGACGGCAACGGCGT+CGG | 0.496777 | 8.3:-69616224 | None:intergenic |
| AAGGTTGTGAAAACTGATCA+AGG | 0.498183 | 8.3:+69616457 | MS.gene071575:CDS |
| GATTCATTCCATACGGCCAC+AGG | 0.500497 | 8.3:+69618502 | MS.gene071575:CDS |
| GAGATTGAGTGCAGTTAGGC+AGG | 0.501270 | 8.3:+69614840 | MS.gene071575:CDS |
| GTGGTGGTGCATTCAAATCA+AGG | 0.504288 | 8.3:+69616694 | MS.gene071575:CDS |
| ATGAAAAGTACATGAAGAAG+AGG | 0.505881 | 8.3:+69617550 | MS.gene071575:CDS |
| TATCAGGATGAAAGCTTCAA+TGG | 0.510924 | 8.3:+69618432 | MS.gene071575:CDS |
| CACTACTACCACTCCACCGC+CGG | 0.511212 | 8.3:-69616366 | None:intergenic |
| GAATTTGCTCCAGGCGGGGA+TGG | 0.511390 | 8.3:+69613626 | MS.gene071575:intron |
| TCATTGAAGCTTTCGTCAGA+AGG | 0.512321 | 8.3:-69619147 | None:intergenic |
| ATAGTTTCTCACCTGAGAGC+GGG | 0.512328 | 8.3:-69618160 | None:intergenic |
| CTTTCAACGGTGTAGGATCT+CGG | 0.512825 | 8.3:+69618703 | MS.gene071575:intron |
| ATGTGAGATTGAGTGCAGTT+AGG | 0.513110 | 8.3:+69614836 | MS.gene071575:CDS |
| AGTCGTCGCCCTGCCTGTGC+CGG | 0.513589 | 8.3:-69616251 | None:intergenic |
| GTATCAAGGAAGAGAAGCTA+AGG | 0.515763 | 8.3:+69618217 | MS.gene071575:CDS |
| TGGAAAGGTTAGTCTGAGCC+AGG | 0.515819 | 8.3:+69618582 | MS.gene071575:CDS |
| TTGTCCTCTTGAACTCAGAT+GGG | 0.518994 | 8.3:+69618291 | MS.gene071575:CDS |
| GGTTTGCTTACTCCAGAAGA+AGG | 0.522653 | 8.3:-69618135 | None:intergenic |
| TGTTCCACACGTGCATCAGC+GGG | 0.524887 | 8.3:-69617178 | None:intergenic |
| TGGTTGCTACATCACTTGGT+AGG | 0.525917 | 8.3:+69616619 | MS.gene071575:CDS |
| ATGACCGGTTGGCCAGATCT+CGG | 0.526896 | 8.3:-69619080 | None:intergenic |
| TGAAGAGGAGCAAAGTATCA+AGG | 0.528530 | 8.3:+69618203 | MS.gene071575:CDS |
| TGTTCTACGTGCACATCAGC+AGG | 0.530794 | 8.3:-69617253 | None:intergenic |
| TCCCTCAGTTTAAAATGGGC+GGG | 0.532504 | 8.3:-69620373 | None:intergenic |
| TTCTTCGTCTTCGTTATCGA+TGG | 0.536054 | 8.3:-69616004 | None:intergenic |
| CAGTTTGAAGGTAGTGGTGG+TGG | 0.536443 | 8.3:+69616675 | MS.gene071575:CDS |
| CTGTTCCACACGTGCATCAG+CGG | 0.537964 | 8.3:-69617179 | None:intergenic |
| CAATCCCATCTGAGTTCAAG+AGG | 0.539827 | 8.3:-69618295 | None:intergenic |
| GATGATTGATCATAAGGGCT+CGG | 0.541574 | 8.3:-69618356 | None:intergenic |
| ACAGATCAGAGAAGGAAGCT+AGG | 0.541744 | 8.3:+69617604 | MS.gene071575:CDS |
| GAGTTGCTTGTTTCAAGTGA+TGG | 0.543765 | 8.3:+69611835 | MS.gene071575:CDS |
| GTTACGTTGTAGAGAGTTGA+AGG | 0.544461 | 8.3:-69616097 | None:intergenic |
| ATTTAAACCAACAACGGAAG+AGG | 0.545934 | 8.3:-69616736 | None:intergenic |
| TCCTTTCGTAAACCATGTCT+CGG | 0.546079 | 8.3:-69611980 | None:intergenic |
| AGATAGTCTTGAGCGGAGTA+GGG | 0.546356 | 8.3:+69617641 | MS.gene071575:CDS |
| TGGTAGTTTACTTCAAGCGA+TGG | 0.547556 | 8.3:-69614954 | None:intergenic |
| ACTCTCTGATTCTGTTCCAA+AGG | 0.549401 | 8.3:-69617026 | None:intergenic |
| ATCTCTGTTACAACTTCTGA+AGG | 0.549505 | 8.3:+69619036 | MS.gene071575:CDS |
| ATGGTTTGTTCCGAACTAGC+AGG | 0.550367 | 8.3:-69616891 | None:intergenic |
| TTCATCCTCTTCATTCTGAA+GGG | 0.551403 | 8.3:-69617913 | None:intergenic |
| AGTTTGGTACAGACTGCGCA+AGG | 0.553497 | 8.3:-69618083 | None:intergenic |
| TGAAGCTTTCGTCAGAAGGA+TGG | 0.553546 | 8.3:-69619143 | None:intergenic |
| TTTCTCGGAGCTTAATATTG+GGG | 0.555166 | 8.3:+69617506 | MS.gene071575:CDS |
| CAGAGAGTAAGGCAGAGTAA+AGG | 0.556082 | 8.3:+69617041 | MS.gene071575:CDS |
| CAACGGTGTAGGATCTCGGC+AGG | 0.557408 | 8.3:+69618707 | MS.gene071575:intron |
| GGTTGCTACATCACTTGGTA+GGG | 0.557575 | 8.3:+69616620 | MS.gene071575:CDS |
| AGGGAACGAGAATTCCAAGC+AGG | 0.560307 | 8.3:-69618840 | None:intergenic |
| CAAGTCTTCTGATGACCGGT+TGG | 0.561681 | 8.3:-69619091 | None:intergenic |
| TGTGCCGGCGTTGGTGATGA+CGG | 0.562230 | 8.3:-69616236 | None:intergenic |
| TTCACCGAGAAACTAGCATC+AGG | 0.562391 | 8.3:+69611859 | MS.gene071575:CDS |
| ATAACCAGACAAAATTCAGC+AGG | 0.562447 | 8.3:+69617693 | MS.gene071575:CDS |
| ATCCCTCAGTTTAAAATGGG+CGG | 0.563871 | 8.3:-69620374 | None:intergenic |
| CATGAGCATTGACGCTAGCA+TGG | 0.566400 | 8.3:+69616390 | MS.gene071575:CDS |
| TGCTAGTTCGGAACAAACCA+TGG | 0.567133 | 8.3:+69616893 | MS.gene071575:CDS |
| AGAGAAGGAAGCTAGGATGA+AGG | 0.567425 | 8.3:+69617611 | MS.gene071575:CDS |
| AACTCACAGTCTAGAAGACC+TGG | 0.568801 | 8.3:+69617208 | MS.gene071575:CDS |
| GGTAGTTTACTTCAAGCGAT+GGG | 0.569272 | 8.3:-69614953 | None:intergenic |
| TTGAGACATCTCTGCATCAA+AGG | 0.569583 | 8.3:-69612157 | None:intergenic |
| TTAGTCCCCGAACTCACAGC+TGG | 0.572238 | 8.3:-69617429 | None:intergenic |
| TAGCAGAAGCACCAATGAAG+AGG | 0.572636 | 8.3:+69618188 | MS.gene071575:CDS |
| TGATAATAATAATTTGGACA+AGG | 0.575415 | 8.3:+69616438 | MS.gene071575:CDS |
| GGCGTTGGTGATGACGGCAA+CGG | 0.575419 | 8.3:-69616230 | None:intergenic |
| TTTGAAGGTAGTGGTGGTGG+TGG | 0.577036 | 8.3:+69616678 | MS.gene071575:CDS |
| CGGAACAAACCATGGGGACA+CGG | 0.578400 | 8.3:+69616901 | MS.gene071575:CDS |
| TTCGTTATCGATGGACATGT+CGG | 0.579689 | 8.3:-69615995 | None:intergenic |
| CATGGGGACACGGAGTAAAA+GGG | 0.583032 | 8.3:+69616911 | MS.gene071575:CDS |
| GAGTTTGAACAGATCAGAGA+AGG | 0.583828 | 8.3:+69617596 | MS.gene071575:CDS |
| AATTCTCGTTCCCTTATCCA+GGG | 0.584993 | 8.3:+69618849 | MS.gene071575:CDS |
| GTCATCACCAACGCCGGCAC+AGG | 0.585521 | 8.3:+69616238 | MS.gene071575:CDS |
| TGCACGGAAGATATATTCGC+AGG | 0.588721 | 8.3:+69612188 | MS.gene071575:CDS |
| TATGGAAGATTCATTCCATA+CGG | 0.589840 | 8.3:+69618495 | MS.gene071575:CDS |
| AGATTCCCTTCAGAATGAAG+AGG | 0.590406 | 8.3:+69617908 | MS.gene071575:CDS |
| TCTTCCAAATCAAATTTCAA+CGG | 0.592536 | 8.3:-69618326 | None:intergenic |
| ACCTTGATGATTGATCATAA+GGG | 0.593848 | 8.3:-69618361 | None:intergenic |
| AATGTGGTTGCTACATCACT+TGG | 0.594624 | 8.3:+69616615 | MS.gene071575:CDS |
| TCGAGAATGGGATTGTCTCA+TGG | 0.596972 | 8.3:+69619120 | MS.gene071575:CDS |
| CACCAACGCCGGCACAGGCA+GGG | 0.597853 | 8.3:+69616243 | MS.gene071575:CDS |
| CAATGTCAGAAGACTCATGC+GGG | 0.600644 | 8.3:-69618788 | None:intergenic |
| GCTCAGTTTGAAGGTAGTGG+TGG | 0.600840 | 8.3:+69616672 | MS.gene071575:CDS |
| GCGCGTGAGTTCCAGGACAC+AGG | 0.605108 | 8.3:-69618747 | None:intergenic |
| AGAATGATGCTGCTCGAATG+AGG | 0.608638 | 8.3:+69618874 | MS.gene071575:CDS |
| TTTGGTACAGACTGCGCAAG+GGG | 0.609859 | 8.3:-69618081 | None:intergenic |
| GCCCTTATGATCAATCATCA+AGG | 0.612177 | 8.3:+69618360 | MS.gene071575:CDS |
| GGATTAGTGAAGCCATACTT+GGG | 0.612725 | 8.3:+69611880 | MS.gene071575:CDS |
| GCTAGTTCGGAACAAACCAT+GGG | 0.613627 | 8.3:+69616894 | MS.gene071575:CDS |
| TTTCTCACCTGAGAGCGGGT+TGG | 0.616190 | 8.3:-69618156 | None:intergenic |
| GACTAAGTCACTTATGAAGA+CGG | 0.616319 | 8.3:+69617446 | MS.gene071575:CDS |
| TTACGAAAGGAACATTTGAG+AGG | 0.616763 | 8.3:+69611992 | MS.gene071575:CDS |
| ATTCATTCCATACGGCCACA+GGG | 0.617363 | 8.3:+69618503 | MS.gene071575:CDS |
| CTGAACCAGCTGTGAGTTCG+GGG | 0.618997 | 8.3:+69617424 | MS.gene071575:CDS |
| GCCGAGACATGGTTTACGAA+AGG | 0.622262 | 8.3:+69611979 | MS.gene071575:CDS |
| TGAGCCCGCTGATGCACGTG+TGG | 0.623663 | 8.3:+69617174 | MS.gene071575:intron |
| CATAGTTTCTCACCTGAGAG+CGG | 0.624037 | 8.3:-69618161 | None:intergenic |
| GAGCAGCATCATTCTCACCC+TGG | 0.624179 | 8.3:-69618866 | None:intergenic |
| GACGTAGAAATGCCGAGACA+TGG | 0.624776 | 8.3:+69611968 | MS.gene071575:CDS |
| AATTTCATCTTGTTCCCCTG+TGG | 0.625503 | 8.3:-69618518 | None:intergenic |
| AACACCATTTAAACCAACAA+CGG | 0.627589 | 8.3:-69616742 | None:intergenic |
| TCAGGATAGTACACATGTAA+CGG | 0.628758 | 8.3:+69617001 | MS.gene071575:CDS |
| GGGTCTTCTTCTGGACGCTG+GGG | 0.629781 | 8.3:+69616478 | MS.gene071575:CDS |
| TGTCTCAATTGGAAGCTGCA+CGG | 0.630977 | 8.3:+69612172 | MS.gene071575:CDS |
| ACCGGTCATCAGAAGACTTG+AGG | 0.631776 | 8.3:+69619094 | MS.gene071575:CDS |
| ACCAGACAAAATTCAGCAGG+AGG | 0.636055 | 8.3:+69617696 | MS.gene071575:CDS |
| AGGTTGTGAAAACTGATCAA+GGG | 0.642830 | 8.3:+69616458 | MS.gene071575:CDS |
| GGTGGATAGTCAGAATTATG+GGG | 0.644647 | 8.3:+69617467 | MS.gene071575:CDS |
| AATATTGGGGATGAATCTAG+AGG | 0.645498 | 8.3:+69617519 | MS.gene071575:CDS |
| ATTCTTCCCAAAATCAACCC+CGG | 0.646550 | 8.3:+69618937 | MS.gene071575:CDS |
| GTTTGGTACAGACTGCGCAA+GGG | 0.646573 | 8.3:-69618082 | None:intergenic |
| GACGATGTTAAGTTTGATGG+GGG | 0.649104 | 8.3:+69616579 | MS.gene071575:CDS |
| ATCAAATATAAAGAGAGACC+AGG | 0.649669 | 8.3:+69617752 | MS.gene071575:CDS |
| TGACGATGTTAAGTTTGATG+GGG | 0.649774 | 8.3:+69616578 | MS.gene071575:CDS |
| GGAAAAGATGATCTCAAATG+GGG | 0.652354 | 8.3:-69616786 | None:intergenic |
| GGGGACAGGAGATCAGCGCA+TGG | 0.661082 | 8.3:+69612315 | MS.gene071575:intron |
| CTCAGTTTAAAATGGGCGGG+AGG | 0.661370 | 8.3:-69620370 | None:intergenic |
| GGGAACGAGAATTCCAAGCA+GGG | 0.661444 | 8.3:-69618839 | None:intergenic |
| TGGTGGTGCATTCAAATCAA+GGG | 0.664398 | 8.3:+69616695 | MS.gene071575:CDS |
| ATGATGCTCACAGGTTTGTG+CGG | 0.666085 | 8.3:+69612097 | MS.gene071575:intron |
| GGACCATTTAAAGTTCGCAG+AGG | 0.669460 | 8.3:+69611901 | MS.gene071575:CDS |
| GGGTGTGAAAAGTAATAATG+TGG | 0.669968 | 8.3:+69616599 | MS.gene071575:CDS |
| GCATGACGAGTTGAAGCTGA+AGG | 0.672898 | 8.3:+69617076 | MS.gene071575:CDS |
| CTGAAATTGGTGATTCTACG+AGG | 0.677991 | 8.3:+69618623 | MS.gene071575:CDS |
| GTTGCCGTCATCACCAACGC+CGG | 0.684269 | 8.3:+69616232 | MS.gene071575:CDS |
| AAAAGGGATGAGATTCGGGG+TGG | 0.686111 | 8.3:+69616927 | MS.gene071575:CDS |
| ATTGACACTCCTGTTGTGCG+AGG | 0.689849 | 8.3:-69618027 | None:intergenic |
| CAATGCAAGATAGTCTTGAG+CGG | 0.692628 | 8.3:+69617634 | MS.gene071575:CDS |
| AAGATCTTGAATGACTACGG+TGG | 0.694140 | 8.3:-69616644 | None:intergenic |
| GTGGATAGTCAGAATTATGG+GGG | 0.696577 | 8.3:+69617468 | MS.gene071575:CDS |
| TTCATTCCATACGGCCACAG+GGG | 0.700611 | 8.3:+69618504 | MS.gene071575:CDS |
| GATCAGCGCATGGATTCACA+AGG | 0.700761 | 8.3:+69612325 | MS.gene071575:CDS |
| TAAGTCACTTATGAAGACGG+TGG | 0.702124 | 8.3:+69617449 | MS.gene071575:CDS |
| AGTAAAAGGGATGAGATTCG+GGG | 0.702463 | 8.3:+69616924 | MS.gene071575:CDS |
| CTACAACGTAACACCAACAA+CGG | 0.705009 | 8.3:+69616108 | MS.gene071575:CDS |
| ACGTTGTAGAGAGTTGAAGG+TGG | 0.713152 | 8.3:-69616094 | None:intergenic |
| CAAGACGACGAAAAGTCACG+TGG | 0.713674 | 8.3:+69615940 | MS.gene071575:CDS |
| GGAGATGATGATATGGACGA+TGG | 0.713828 | 8.3:+69619057 | MS.gene071575:CDS |
| CCCAAGCCCAAACATCCACG+TGG | 0.722286 | 8.3:+69616052 | MS.gene071575:CDS |
| TCAATGTCAGAAGACTCATG+CGG | 0.734206 | 8.3:-69618789 | None:intergenic |
| TGGAACAAGAGTAATCGGAG+CGG | 0.770089 | 8.3:+69613646 | MS.gene071575:CDS |
| CTAGTTCGGAACAAACCATG+GGG | 0.780495 | 8.3:+69616895 | MS.gene071575:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 69611831 | 69620412 | 69611831 | ID=MS.gene071575 |
| chr8.3 | mRNA | 69611831 | 69620412 | 69611831 | ID=MS.gene071575.t1;Parent=MS.gene071575 |
| chr8.3 | exon | 69611831 | 69612013 | 69611831 | ID=MS.gene071575.t1.exon1;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69611831 | 69612013 | 69611831 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69612110 | 69612209 | 69612110 | ID=MS.gene071575.t1.exon2;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69612110 | 69612209 | 69612110 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69612316 | 69612346 | 69612316 | ID=MS.gene071575.t1.exon3;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69612316 | 69612346 | 69612316 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69613639 | 69613681 | 69613639 | ID=MS.gene071575.t1.exon4;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69613639 | 69613681 | 69613639 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69614828 | 69614965 | 69614828 | ID=MS.gene071575.t1.exon5;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69614828 | 69614965 | 69614828 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69615882 | 69616132 | 69615882 | ID=MS.gene071575.t1.exon6;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69615882 | 69616132 | 69615882 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69616195 | 69616309 | 69616195 | ID=MS.gene071575.t1.exon7;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69616195 | 69616309 | 69616195 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69616348 | 69616499 | 69616348 | ID=MS.gene071575.t1.exon8;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69616348 | 69616499 | 69616348 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69616538 | 69617139 | 69616538 | ID=MS.gene071575.t1.exon9;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69616538 | 69617139 | 69616538 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69617178 | 69617275 | 69617178 | ID=MS.gene071575.t1.exon10;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69617178 | 69617275 | 69617178 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69617413 | 69617773 | 69617413 | ID=MS.gene071575.t1.exon11;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69617413 | 69617773 | 69617413 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69617900 | 69617984 | 69617900 | ID=MS.gene071575.t1.exon12;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69617900 | 69617984 | 69617900 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69618022 | 69618243 | 69618022 | ID=MS.gene071575.t1.exon13;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69618022 | 69618243 | 69618022 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69618288 | 69618381 | 69618288 | ID=MS.gene071575.t1.exon14;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69618288 | 69618381 | 69618288 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69618429 | 69618676 | 69618429 | ID=MS.gene071575.t1.exon15;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69618429 | 69618676 | 69618429 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69618718 | 69618964 | 69618718 | ID=MS.gene071575.t1.exon16;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69618718 | 69618964 | 69618718 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69619002 | 69619178 | 69619002 | ID=MS.gene071575.t1.exon17;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69619002 | 69619178 | 69619002 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| chr8.3 | exon | 69620357 | 69620412 | 69620357 | ID=MS.gene071575.t1.exon18;Parent=MS.gene071575.t1 |
| chr8.3 | CDS | 69620357 | 69620412 | 69620357 | ID=cds.MS.gene071575.t1;Parent=MS.gene071575.t1 |
| Gene Sequence |
| Protein sequence |
