AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058197


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058197.t1 MTR_2g034810 94.805 924 27 2 1 904 1 923 0.0 1784
MS.gene058197.t1 MTR_7g112030 33.298 952 535 25 6 902 2 908 1.26e-119 386
MS.gene058197.t1 MTR_1g083850 30.182 878 445 35 60 901 2 747 1.68e-70 248
MS.gene058197.t1 MTR_7g082220 26.087 437 222 15 511 904 559 937 4.03e-18 90.1
MS.gene058197.t1 MTR_6g018770 25.284 352 221 10 570 902 550 878 4.18e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058197.t1 AT3G58650 31.887 922 475 32 12 902 11 810 7.17e-98 325
MS.gene058197.t1 AT5G26910 31.447 919 511 29 6 902 5 826 1.62e-91 309
MS.gene058197.t1 AT5G26910 31.447 919 511 29 6 902 5 826 1.62e-91 309
MS.gene058197.t1 AT5G26910 31.338 919 511 29 6 902 5 825 1.81e-91 308
MS.gene058197.t1 AT5G26910 41.767 249 128 5 6 240 5 250 1.73e-41 162
MS.gene058197.t1 AT3G05750 38.994 159 91 2 745 902 637 790 4.75e-23 105
MS.gene058197.t1 AT3G05750 38.994 159 91 2 745 902 542 695 4.99e-23 105
MS.gene058197.t1 AT3G05750 38.994 159 91 2 745 902 542 695 4.99e-23 105
MS.gene058197.t1 AT3G05750 38.994 159 91 2 745 902 645 798 5.62e-23 105
MS.gene058197.t1 AT1G67040 31.466 232 124 11 12 223 28 244 1.35e-11 68.9
MS.gene058197.t1 AT1G67040 31.466 232 124 11 12 223 28 244 1.55e-11 68.9

Find 185 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATTGATCTTGCCGATTT+TGG 0.126247 2.2:-54177313 None:intergenic
CCCTCAACTTCTGTTCTAAA+AGG 0.206450 2.2:-54178536 None:intergenic
GATTCTCAGTTTCTATATTC+TGG 0.225407 2.2:+54177184 MS.gene058197:CDS
ACAAAACCGGGATTCTTAAT+AGG 0.234211 2.2:-54177361 None:intergenic
TGATCAAATATTTAATTCTT+TGG 0.234441 2.2:+54179806 MS.gene058197:CDS
TAATAGGGGACAAAAGTTTA+TGG 0.239442 2.2:-54177345 None:intergenic
GATTCTTCTTTGAATAATAA+AGG 0.253439 2.2:+54177748 MS.gene058197:CDS
GAGGTTGATGCTTATGAATT+TGG 0.255705 2.2:+54179771 MS.gene058197:CDS
GGATTGCTGCTCCTTGTTAA+TGG 0.259788 2.2:-54178372 None:intergenic
TAATGTAGTTGCAAGGCTTA+TGG 0.290220 2.2:+54177087 MS.gene058197:CDS
TTATGTTTCAATGATGATTC+TGG 0.299384 2.2:-54178708 None:intergenic
CCAATTACATTGTATCCTAT+TGG 0.304963 2.2:-54178495 None:intergenic
CCAATAGGATACAATGTAAT+TGG 0.307017 2.2:+54178495 MS.gene058197:CDS
CAACAATCCTGCTTATATAA+TGG 0.326959 2.2:+54177390 MS.gene058197:CDS
CAATGATGATTCTGGAAGAT+TGG 0.328218 2.2:-54178700 None:intergenic
AATCCAACCACTTTCCATAT+TGG 0.332576 2.2:-54179746 None:intergenic
TGAGAACATTAGAAGAATTC+TGG 0.343239 2.2:-54177939 None:intergenic
AATGTAGTTGCAAGGCTTAT+GGG 0.343622 2.2:+54177088 MS.gene058197:CDS
TCTAAAGTTAACCTCAATCT+AGG 0.348348 2.2:+54178597 MS.gene058197:CDS
CTCCCTTTCGGCTTTCCAAC+TGG 0.349402 2.2:-54179485 None:intergenic
CAAAACCGGGATTCTTAATA+GGG 0.350999 2.2:-54177360 None:intergenic
AAAAGTTTATGGTGTGTAAC+AGG 0.355362 2.2:-54177334 None:intergenic
TTTGCCTCCTTCCGGTTTCT+CGG 0.358423 2.2:+54177120 MS.gene058197:CDS
GGGATCTTCTAGCAATTTCA+TGG 0.358544 2.2:+54177228 MS.gene058197:CDS
TTAGATTCTTTGCCTCCTTC+CGG 0.359642 2.2:+54177112 MS.gene058197:CDS
ACGACTGGAGATTCCTCTTA+TGG 0.366120 2.2:+54178057 MS.gene058197:CDS
GTTGGCAAAAGATGTGTATA+AGG 0.368623 2.2:+54179656 MS.gene058197:CDS
AGATCAAGATATGTCGTTTA+CGG 0.368642 2.2:+54178635 MS.gene058197:CDS
AAGGATATGAGTAGCCAATA+TGG 0.377746 2.2:+54179732 MS.gene058197:CDS
GACCGGTGGCAGAAATTTGA+TGG 0.381328 2.2:+54177834 MS.gene058197:CDS
CAATGTAGAGTTAATGTATA+TGG 0.382857 2.2:+54179413 MS.gene058197:CDS
ATAAGCCTTGCAACTACATT+AGG 0.385722 2.2:-54177085 None:intergenic
AGCAAAGGCTAAAGCGCATT+TGG 0.386167 2.2:+54177450 MS.gene058197:CDS
AATTTGCATAGGAAATCTTC+TGG 0.387773 2.2:+54177916 MS.gene058197:CDS
AATGCGCTTTAGCCTTTGCT+TGG 0.391802 2.2:-54177447 None:intergenic
GGAGACTTAACAGATGTTTC+CGG 0.393264 2.2:-54177709 None:intergenic
CGCTCTTGAAACCTCCCTTT+CGG 0.395032 2.2:-54179497 None:intergenic
GAATGCTGTGAAGTGTTTAC+AGG 0.396936 2.2:+54177654 MS.gene058197:CDS
GGCAATGAGACATCCCTATC+TGG 0.407656 2.2:+54176863 MS.gene058197:CDS
ATTCTTCTTTGAATAATAAA+GGG 0.413579 2.2:+54177749 MS.gene058197:CDS
GATTGATATTGCTACCAGAT+AGG 0.414071 2.2:-54176877 None:intergenic
ATAGAAACTGAGAATCTTGA+AGG 0.414969 2.2:-54177177 None:intergenic
CTAGTGAGTAATAAACAATA+TGG 0.417569 2.2:+54178291 MS.gene058197:CDS
TGTCATTATTATCAATTGAA+TGG 0.417904 2.2:-54177984 None:intergenic
ATTTGCCTTAGGTGGTTGAT+TGG 0.419546 2.2:-54177884 None:intergenic
TTGGAAACCAATGGCTTAGA+TGG 0.421919 2.2:-54178015 None:intergenic
TAATTTCTTACGCGATTTCG+AGG 0.425164 2.2:-54176678 None:intergenic
AGAAGTATTGCCTCCAAAAT+CGG 0.425187 2.2:+54177300 MS.gene058197:CDS
GTTAACTTTAGAAACATCAT+TGG 0.426304 2.2:-54178586 None:intergenic
GAAGGCTCAAGAACTGAGAT+TGG 0.428155 2.2:-54179026 None:intergenic
GACAATCTTTGAACAAAAGC+TGG 0.430363 2.2:+54177677 MS.gene058197:CDS
GGATACAAAATGTGGACAAA+AGG 0.432659 2.2:+54179606 MS.gene058197:CDS
CATCATTGAAACATAAATCA+TGG 0.434027 2.2:+54178715 MS.gene058197:CDS
ATATGCAGAGTCTTTGAAAC+AGG 0.436345 2.2:+54176818 MS.gene058197:intron
CAGGTCGATGAAGACGAAAA+TGG 0.438366 2.2:+54176980 MS.gene058197:intron
GCTTCTATGCCGTCCATAAG+AGG 0.439709 2.2:-54178070 None:intergenic
ATTGTTGGATGGAACAAAAC+CGG 0.440286 2.2:-54177374 None:intergenic
ATGAAGACGAAAATGGTGTT+GGG 0.440544 2.2:+54176987 MS.gene058197:CDS
GAAAGGGATGAGAGATTCAA+TGG 0.441206 2.2:+54179692 MS.gene058197:CDS
TCTAGGAAAATTATTTGTCC+TGG 0.441310 2.2:-54178181 None:intergenic
CCGCAAGAATTCTTGAACCT+GGG 0.445062 2.2:+54177419 MS.gene058197:CDS
ACTGAAGATGTCGCAATAAG+AGG 0.450581 2.2:-54177538 None:intergenic
AGAATTCTTCTAATGTTCTC+AGG 0.451320 2.2:+54177941 MS.gene058197:CDS
TGATTGTGTGAGTGAATGTA+TGG 0.451480 2.2:+54179554 MS.gene058197:CDS
GTTTCTATATTCTGGAAAGT+TGG 0.452052 2.2:+54177192 MS.gene058197:CDS
CGCTTTAGCCTTTGCTTGGG+AGG 0.453823 2.2:-54177443 None:intergenic
GCCCATCAAATTTCTGCCAC+CGG 0.457784 2.2:-54177836 None:intergenic
GGTTGATGAGCTTGTGGATA+AGG 0.459758 2.2:+54179713 MS.gene058197:CDS
CATGGAGTCAAAGCCTCAAA+AGG 0.460709 2.2:+54177246 MS.gene058197:CDS
GTAATTGGCGGCGATGCCTT+AGG 0.460790 2.2:+54178510 MS.gene058197:CDS
CTCACTAGATTTGACTTCGC+TGG 0.460882 2.2:-54178276 None:intergenic
GACAATACAAGGTCTCCAAT+AGG 0.471049 2.2:+54178480 MS.gene058197:CDS
ATGCGCTTTAGCCTTTGCTT+GGG 0.471863 2.2:-54177446 None:intergenic
TTGAGATGTAGAAGTTATGT+TGG 0.471928 2.2:+54179579 MS.gene058197:CDS
TTCTGAGCATTTGCCTTAGG+TGG 0.472013 2.2:-54177892 None:intergenic
TGTCGAGGTGTCACAGAACC+TGG 0.473644 2.2:-54178393 None:intergenic
TGGAAAGTGGTTGGATTATG+AGG 0.473906 2.2:+54179752 MS.gene058197:CDS
CAACCTCGCGAGATCGGCCG+AGG 0.475906 2.2:-54179443 None:intergenic
TCAAGAACTGAGATTGGACT+TGG 0.479255 2.2:-54179020 None:intergenic
GCCGCAAGAATTCTTGAACC+TGG 0.480122 2.2:+54177418 MS.gene058197:CDS
CATTATATAAGCAGGATTGT+TGG 0.482949 2.2:-54177389 None:intergenic
CATCATCGACGGTCTCACTA+AGG 0.485114 2.2:+54177473 MS.gene058197:CDS
CAAAAGTGAATGTTCAAAGA+AGG 0.486529 2.2:+54177797 MS.gene058197:CDS
CGAGTAGGGATCCGAGAAAC+CGG 0.493083 2.2:-54177131 None:intergenic
CTGAGATTGGACTTGGTTGT+CGG 0.498616 2.2:-54179013 None:intergenic
TTGTCCCCTATTAAGAATCC+CGG 0.498971 2.2:+54177355 MS.gene058197:CDS
TTTAGAAACATCATTGGAAG+AGG 0.499066 2.2:-54178580 None:intergenic
GATACAAAATGTGGACAAAA+GGG 0.500320 2.2:+54179607 MS.gene058197:CDS
GGTTAAAGATCTTAGAGATA+AGG 0.502958 2.2:+54177495 MS.gene058197:CDS
GAATACTAATGATCTTTCGT+TGG 0.507943 2.2:+54178425 MS.gene058197:CDS
ATTGATATTGCTACCAGATA+GGG 0.509200 2.2:-54176876 None:intergenic
ATCAGTACCATCTAAGCCAT+TGG 0.511226 2.2:+54178008 MS.gene058197:CDS
TCTCATTGCCACATTGTGGT+TGG 0.512196 2.2:-54176850 None:intergenic
CTCTCATCTATTCAACCAGT+TGG 0.518033 2.2:+54179470 MS.gene058197:CDS
AGATGTAGAAGTTATGTTGG+TGG 0.518076 2.2:+54179582 MS.gene058197:CDS
AGTTCACAACCTCGCGAGAT+CGG 0.518518 2.2:-54179449 None:intergenic
CAGCTTTCAACCGAAAATGA+AGG 0.520086 2.2:-54179044 None:intergenic
TTAACAAGGAGCAGCAATCC+AGG 0.521935 2.2:+54178375 MS.gene058197:CDS
AACCAGTTGGAAAGCCGAAA+GGG 0.522654 2.2:+54179483 MS.gene058197:CDS
GGTGTTGGGGAATATGTTAG+AGG 0.527966 2.2:+54177001 MS.gene058197:CDS
ACGATGAATCAAGGATAGAA+AGG 0.528440 2.2:+54179520 MS.gene058197:CDS
AAAGGTCTACAGACAAGGAC+TGG 0.530185 2.2:+54178208 MS.gene058197:CDS
AGGGAAGGTTTGAGTTCGAC+CGG 0.531361 2.2:+54177817 MS.gene058197:CDS
GTGGACAAAAGGGTTTGAAA+TGG 0.534070 2.2:+54179617 MS.gene058197:CDS
GCCTTTGCTTGGGAGGACCC+AGG 0.534090 2.2:-54177436 None:intergenic
CAGCTTCTTCAACATCAACT+AGG 0.535267 2.2:+54179295 MS.gene058197:CDS
TCTTTGAACAAAAGCTGGAA+TGG 0.535359 2.2:+54177682 MS.gene058197:CDS
TGTAGAAGTTATGTTGGTGG+AGG 0.536172 2.2:+54179585 MS.gene058197:CDS
CAAAAGCTGGAATGGAGCAC+CGG 0.536269 2.2:+54177690 MS.gene058197:CDS
GCAGCCTCCATTATATAAGC+AGG 0.537047 2.2:-54177397 None:intergenic
GATGAAGACGAAAATGGTGT+TGG 0.540397 2.2:+54176986 MS.gene058197:CDS
AGCGCATTTGGCATCATCGA+CGG 0.545183 2.2:+54177462 MS.gene058197:CDS
TCTGTTGCAATCCTAGATTG+AGG 0.548612 2.2:-54178608 None:intergenic
GTGAATGTTCAAAGAAGGGA+AGG 0.551174 2.2:+54177802 MS.gene058197:CDS
AAATGGTGAAAAGAAAAGAC+TGG 0.552136 2.2:+54179634 MS.gene058197:CDS
AAAAGTGAATGTTCAAAGAA+GGG 0.552284 2.2:+54177798 MS.gene058197:CDS
TTGTTGGATGGAACAAAACC+GGG 0.552886 2.2:-54177373 None:intergenic
ATCATTGAAACATAAATCAT+GGG 0.554865 2.2:+54178716 MS.gene058197:CDS
TCAAGAGCGACGATGAATCA+AGG 0.555470 2.2:+54179511 MS.gene058197:CDS
CAAGGTAGAAAAGTTACGAC+TGG 0.558357 2.2:+54178042 MS.gene058197:CDS
TTGGTAGATCATCAACTACA+TGG 0.558692 2.2:+54179361 MS.gene058197:CDS
ATTCAATCTCAAGAAATCCA+TGG 0.560466 2.2:+54179216 MS.gene058197:CDS
TTCAATGGTTGATGAGCTTG+TGG 0.560544 2.2:+54179707 MS.gene058197:CDS
GGTGAAAAGAAAAGACTGGT+TGG 0.561563 2.2:+54179638 MS.gene058197:CDS
GAAATCCAATCAACCACCTA+AGG 0.567150 2.2:+54177879 MS.gene058197:CDS
TTCCCTCGGCCGATCTCGCG+AGG 0.570693 2.2:+54179440 MS.gene058197:CDS
GCATCAAAGTCAGATTTACC+AGG 0.572115 2.2:+54176704 MS.gene058197:CDS
TAAAGATCTTAGAGATAAGG+TGG 0.573035 2.2:+54177498 MS.gene058197:CDS
ACCGGTGGCAGAAATTTGAT+GGG 0.573900 2.2:+54177835 MS.gene058197:CDS
CAACCAGTTGGAAAGCCGAA+AGG 0.575183 2.2:+54179482 MS.gene058197:CDS
TAGCCAATATGGAAAGTGGT+TGG 0.575562 2.2:+54179743 MS.gene058197:CDS
CCCAGGTTCAAGAATTCTTG+CGG 0.576295 2.2:-54177419 None:intergenic
AAGGTGGACTCTTCGCAGAA+AGG 0.576510 2.2:+54177514 MS.gene058197:CDS
ATATAAGCAGGATTGTTGGA+TGG 0.580763 2.2:-54177385 None:intergenic
TGCTTGATACAGACAATACA+AGG 0.581399 2.2:+54178469 MS.gene058197:CDS
TGAGTAATAAACAATATGGT+GGG 0.582248 2.2:+54178295 MS.gene058197:CDS
TGAGTAGCCAATATGGAAAG+TGG 0.584195 2.2:+54179739 MS.gene058197:CDS
TCCATTGTAAAATCTAAAGT+CGG 0.584358 2.2:+54178105 MS.gene058197:CDS
ATAGGATACAATGTAATTGG+CGG 0.584996 2.2:+54178498 MS.gene058197:CDS
ATGTTTGCAGGGTGATGAGA+TGG 0.589624 2.2:+54178971 MS.gene058197:intron
GAATCTTCTTCTGCGTGTGT+AGG 0.589839 2.2:-54177730 None:intergenic
TGATGTTGAAGAAGCTGAGT+CGG 0.591186 2.2:-54179289 None:intergenic
GTGAGTAATAAACAATATGG+TGG 0.591690 2.2:+54178294 MS.gene058197:CDS
ACCTGGGTCCTCCCAAGCAA+AGG 0.594584 2.2:+54177435 MS.gene058197:CDS
ATCATCGACGGTCTCACTAA+GGG 0.595032 2.2:+54177474 MS.gene058197:CDS
CCATTGGTTTCCAACTCGCA+AGG 0.595241 2.2:+54178024 MS.gene058197:CDS
CAATCCTGCTTATATAATGG+AGG 0.595285 2.2:+54177393 MS.gene058197:CDS
TCGAGGTCCAATCAAACAAG+TGG 0.595809 2.2:-54176661 None:intergenic
GTATTCTTTCCACCTTGTCG+AGG 0.598057 2.2:-54178408 None:intergenic
ACGGATGTTATCAGTGCAGA+AGG 0.599029 2.2:+54179083 MS.gene058197:CDS
CATTCACTACACCATTAACA+AGG 0.608076 2.2:+54178361 MS.gene058197:CDS
CTGTTCTAAAAGGATACCTA+AGG 0.611780 2.2:-54178526 None:intergenic
CTGTGAATCCTCGATGAGCA+CGG 0.612501 2.2:+54179064 MS.gene058197:CDS
TCTCATCAGAATCTACTCAA+AGG 0.615246 2.2:+54177620 MS.gene058197:CDS
CCTTGCGAGTTGGAAACCAA+TGG 0.620891 2.2:-54178024 None:intergenic
ACTATGATAAAGAAGCAGAC+AGG 0.622027 2.2:+54179318 MS.gene058197:CDS
TAGAAACTGAGAATCTTGAA+GGG 0.623762 2.2:-54177176 None:intergenic
GGACGGCATAGAAGCTCAAG+TGG 0.631619 2.2:+54178078 MS.gene058197:CDS
AATTTCTCAAAGAAGAAGCA+AGG 0.634224 2.2:+54177597 MS.gene058197:CDS
ACACTTCACAGCATTCGACT+CGG 0.634714 2.2:-54177647 None:intergenic
CTGGAGATTCCTCTTATGGA+CGG 0.637212 2.2:+54178061 MS.gene058197:CDS
TAGGGATCCGAGAAACCGGA+AGG 0.638892 2.2:-54177127 None:intergenic
GACAGTTTAAACAGTAGCTG+TGG 0.639820 2.2:+54178657 MS.gene058197:CDS
CAGTTGGAAAGCCGAAAGGG+AGG 0.641527 2.2:+54179486 MS.gene058197:CDS
GAGCTCCTAATGTAGTTGCA+AGG 0.641567 2.2:+54177080 MS.gene058197:CDS
AACTCTGCATCAGATTCAGT+AGG 0.641798 2.2:-54179264 None:intergenic
AAAGAAAAGGTCTACAGACA+AGG 0.643351 2.2:+54178203 MS.gene058197:CDS
AATGCTGTGAAGTGTTTACA+GGG 0.647568 2.2:+54177655 MS.gene058197:CDS
TGAAGACGAAAATGGTGTTG+GGG 0.648206 2.2:+54176988 MS.gene058197:CDS
AACCTCGCGAGATCGGCCGA+GGG 0.650868 2.2:-54179442 None:intergenic
GATGTCTCATTGCCACATTG+TGG 0.650908 2.2:-54176854 None:intergenic
TGGTAGATCATCAACTACAT+GGG 0.652706 2.2:+54179362 MS.gene058197:CDS
GAAGGTTTGAGTTCGACCGG+TGG 0.655900 2.2:+54177820 MS.gene058197:CDS
AAAATGAAATTCTATACACC+AGG 0.659647 2.2:+54178163 MS.gene058197:CDS
AAGAAAATCCAACCACAATG+TGG 0.662792 2.2:+54176842 MS.gene058197:CDS
TGTCGGCAATTGAATGACAG+AGG 0.665750 2.2:-54178996 None:intergenic
TGATTCTGGAAGATTGGTCA+AGG 0.670057 2.2:-54178694 None:intergenic
AAGTTGAGGGAATTGACAAG+TGG 0.671342 2.2:+54178549 MS.gene058197:CDS
GGTTCTGTGACACCTCGACA+AGG 0.671483 2.2:+54178396 MS.gene058197:CDS
GGATCCGAGAAACCGGAAGG+AGG 0.677160 2.2:-54177124 None:intergenic
AAAACCGGGATTCTTAATAG+GGG 0.690424 2.2:-54177359 None:intergenic
TTGGTGGAGGATACAAAATG+TGG 0.699477 2.2:+54179598 MS.gene058197:CDS
TCTGTGACACCTCGACAAGG+TGG 0.707322 2.2:+54178399 MS.gene058197:CDS
GTTACAAGTGATGACACATG+TGG 0.725091 2.2:+54177052 MS.gene058197:CDS
GATAACATCCGTGCTCATCG+AGG 0.725688 2.2:-54179072 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAATACAATTGACAA+GGG - chr2.2:54176753-54176772 None:intergenic 15.0%
!! AGATAATAATCACTTAAATA+TGG - chr2.2:54178757-54178776 None:intergenic 15.0%
!! ATTCTTCTTTGAATAATAAA+GGG + chr2.2:54177749-54177768 MS.gene058197:CDS 15.0%
!! TGATCAAATATTTAATTCTT+TGG + chr2.2:54179806-54179825 MS.gene058197:CDS 15.0%
!!! AGTGATTATTCAATAATTTT+TGG - chr2.2:54178887-54178906 None:intergenic 15.0%
!!! ATAATCACTCTTTTATTAAT+TGG + chr2.2:54178898-54178917 MS.gene058197:intron 15.0%
!!! TTAATTTCATCTTTTGTTAT+TGG + chr2.2:54176779-54176798 MS.gene058197:intron 15.0%
!!! TTTTACTGTATATATTTTTC+AGG + chr2.2:54179174-54179193 MS.gene058197:intron 15.0%
!! AAAAATTATGTACAAGTAAC+AGG - chr2.2:54176921-54176940 None:intergenic 20.0%
!! AAAACCATAAACAAAAAGTT+AGG + chr2.2:54178824-54178843 MS.gene058197:intron 20.0%
!! ATCATTGAAACATAAATCAT+GGG + chr2.2:54178716-54178735 MS.gene058197:CDS 20.0%
!! CAATAAAAATACAATTGACA+AGG - chr2.2:54176754-54176773 None:intergenic 20.0%
!! GATTCTTCTTTGAATAATAA+AGG + chr2.2:54177748-54177767 MS.gene058197:CDS 20.0%
!! TGTCATTATTATCAATTGAA+TGG - chr2.2:54177987-54178006 None:intergenic 20.0%
!!! ATAATTTTCCTAGAAAGAAA+AGG + chr2.2:54178190-54178209 MS.gene058197:CDS 20.0%
!!! GCTAAATTTATACTTTTTGA+TGG + chr2.2:54178850-54178869 MS.gene058197:intron 20.0%
!!! TCAAAAAGTATAAATTTAGC+AGG - chr2.2:54178850-54178869 None:intergenic 20.0%
! AAAAGTGAATGTTCAAAGAA+GGG + chr2.2:54177798-54177817 MS.gene058197:CDS 25.0%
! AAAATGAAATTCTATACACC+AGG + chr2.2:54178163-54178182 MS.gene058197:CDS 25.0%
! ATTACATGTTTAATTCTTCC+AGG + chr2.2:54176961-54176980 MS.gene058197:intron 25.0%
! CAATGTAGAGTTAATGTATA+TGG + chr2.2:54179413-54179432 MS.gene058197:CDS 25.0%
! CATCATTGAAACATAAATCA+TGG + chr2.2:54178715-54178734 MS.gene058197:CDS 25.0%
! CTAGTGAGTAATAAACAATA+TGG + chr2.2:54178291-54178310 MS.gene058197:CDS 25.0%
! CTTAAAAAGTTACTGTTGTT+TGG + chr2.2:54179115-54179134 MS.gene058197:intron 25.0%
! GTATAATGTCATCAGTTTAA+TGG + chr2.2:54178799-54178818 MS.gene058197:intron 25.0%
! TCCTTGAAAAATTAAATCCA+TGG - chr2.2:54179236-54179255 None:intergenic 25.0%
! TGAGTAATAAACAATATGGT+GGG + chr2.2:54178295-54178314 MS.gene058197:CDS 25.0%
! TGAGTTAATGACTTACTTAA+TGG - chr2.2:54178948-54178967 None:intergenic 25.0%
! TTAATTTAATGACACATGAG+TGG + chr2.2:54179145-54179164 MS.gene058197:intron 25.0%
! TTATGTTTCAATGATGATTC+TGG - chr2.2:54178711-54178730 None:intergenic 25.0%
!! ACATTTTCTATGATGAAGTT+TGG + chr2.2:54179342-54179361 MS.gene058197:CDS 25.0%
!! ATCACTCTTTTATTAATTGG+TGG + chr2.2:54178901-54178920 MS.gene058197:intron 25.0%
!! GTTAACTTTAGAAACATCAT+TGG - chr2.2:54178589-54178608 None:intergenic 25.0%
!! TAGAATTTCATTTTCGCTAT+CGG - chr2.2:54178157-54178176 None:intergenic 25.0%
!! TCCATTGTAAAATCTAAAGT+CGG + chr2.2:54178105-54178124 MS.gene058197:CDS 25.0%
!!! AAGGAAATTTTGAGTTTGAA+AGG + chr2.2:54179675-54179694 MS.gene058197:CDS 25.0%
!!! AGGAAATTTTGAGTTTGAAA+GGG + chr2.2:54179676-54179695 MS.gene058197:CDS 25.0%
!!! TCCATGGATTTAATTTTTCA+AGG + chr2.2:54179232-54179251 MS.gene058197:CDS 25.0%
!!! TCTCTTTGAAACTTTTCAAT+TGG - chr2.2:54177283-54177302 None:intergenic 25.0%
AAAAGTTTATGGTGTGTAAC+AGG - chr2.2:54177337-54177356 None:intergenic 30.0%
AAATGGTGAAAAGAAAAGAC+TGG + chr2.2:54179634-54179653 MS.gene058197:CDS 30.0%
AATTTCTCAAAGAAGAAGCA+AGG + chr2.2:54177597-54177616 MS.gene058197:CDS 30.0%
AATTTGCATAGGAAATCTTC+TGG + chr2.2:54177916-54177935 MS.gene058197:CDS 30.0%
AGAAGTGAAAAAGAAAGACA+TGG + chr2.2:54178323-54178342 MS.gene058197:CDS 30.0%
AGAATTCTTCTAATGTTCTC+AGG + chr2.2:54177941-54177960 MS.gene058197:CDS 30.0%
ATAGAAACTGAGAATCTTGA+AGG - chr2.2:54177180-54177199 None:intergenic 30.0%
ATAGGATACAATGTAATTGG+CGG + chr2.2:54178498-54178517 MS.gene058197:CDS 30.0%
ATGCTCAGAAAAATTTGCAT+AGG + chr2.2:54177905-54177924 MS.gene058197:CDS 30.0%
ATTAACTCAAAGATGTTTGC+AGG + chr2.2:54178959-54178978 MS.gene058197:intron 30.0%
ATTCAATCTCAAGAAATCCA+TGG + chr2.2:54179216-54179235 MS.gene058197:CDS 30.0%
ATTGATATTGCTACCAGATA+GGG - chr2.2:54176879-54176898 None:intergenic 30.0%
CAAAAGTGAATGTTCAAAGA+AGG + chr2.2:54177797-54177816 MS.gene058197:CDS 30.0%
CAACAATCCTGCTTATATAA+TGG + chr2.2:54177390-54177409 MS.gene058197:CDS 30.0%
CATTATATAAGCAGGATTGT+TGG - chr2.2:54177392-54177411 None:intergenic 30.0%
CCAATAGGATACAATGTAAT+TGG + chr2.2:54178495-54178514 MS.gene058197:CDS 30.0%
CCAATTACATTGTATCCTAT+TGG - chr2.2:54178498-54178517 None:intergenic 30.0%
GAAAAAGAAGGGACTAAAAA+TGG + chr2.2:54176626-54176645 MS.gene058197:CDS 30.0%
GAATACTAATGATCTTTCGT+TGG + chr2.2:54178425-54178444 MS.gene058197:CDS 30.0%
GATACAAAATGTGGACAAAA+GGG + chr2.2:54179607-54179626 MS.gene058197:CDS 30.0%
GATTCTCAGTTTCTATATTC+TGG + chr2.2:54177184-54177203 MS.gene058197:CDS 30.0%
GGTTAAAGATCTTAGAGATA+AGG + chr2.2:54177495-54177514 MS.gene058197:CDS 30.0%
GTGAGTAATAAACAATATGG+TGG + chr2.2:54178294-54178313 MS.gene058197:CDS 30.0%
TAAAGATCTTAGAGATAAGG+TGG + chr2.2:54177498-54177517 MS.gene058197:CDS 30.0%
TAATAGGGGACAAAAGTTTA+TGG - chr2.2:54177348-54177367 None:intergenic 30.0%
TAGAAACTGAGAATCTTGAA+GGG - chr2.2:54177179-54177198 None:intergenic 30.0%
TCTAGGAAAATTATTTGTCC+TGG - chr2.2:54178184-54178203 None:intergenic 30.0%
TGAGAACATTAGAAGAATTC+TGG - chr2.2:54177942-54177961 None:intergenic 30.0%
TTAACTCAAAGATGTTTGCA+GGG + chr2.2:54178960-54178979 MS.gene058197:intron 30.0%
TTGAGATGTAGAAGTTATGT+TGG + chr2.2:54179579-54179598 MS.gene058197:CDS 30.0%
TTTAGAAACATCATTGGAAG+AGG - chr2.2:54178583-54178602 None:intergenic 30.0%
! AAAGTTGGTTGAAAAAGTTG+AGG + chr2.2:54177207-54177226 MS.gene058197:CDS 30.0%
! AAGTTGGTTGAAAAAGTTGA+GGG + chr2.2:54177208-54177227 MS.gene058197:CDS 30.0%
! AGATCAAGATATGTCGTTTA+CGG + chr2.2:54178635-54178654 MS.gene058197:CDS 30.0%
! ATGTATATGGATTTTTCCCT+CGG + chr2.2:54179426-54179445 MS.gene058197:CDS 30.0%
! GTTTCTATATTCTGGAAAGT+TGG + chr2.2:54177192-54177211 MS.gene058197:CDS 30.0%
! TCCGACTTTAGATTTTACAA+TGG - chr2.2:54178109-54178128 None:intergenic 30.0%
! TCTAAAGTTAACCTCAATCT+AGG + chr2.2:54178597-54178616 MS.gene058197:CDS 30.0%
!! TTTGAACATTCACTTTTGCT+TGG - chr2.2:54177795-54177814 None:intergenic 30.0%
!!! GTTTTTTCCACTTGTTTGAT+TGG + chr2.2:54176654-54176673 MS.gene058197:CDS 30.0%
AAAACCGGGATTCTTAATAG+GGG - chr2.2:54177362-54177381 None:intergenic 35.0%
AAAGAAAAGGTCTACAGACA+AGG + chr2.2:54178203-54178222 MS.gene058197:CDS 35.0%
AAAGAAGGGACTAAAAATGG+AGG + chr2.2:54176629-54176648 MS.gene058197:CDS 35.0%
AAGAAAATCCAACCACAATG+TGG + chr2.2:54176842-54176861 MS.gene058197:CDS 35.0%
AAGGATATGAGTAGCCAATA+TGG + chr2.2:54179732-54179751 MS.gene058197:CDS 35.0%
AATCCAACCACTTTCCATAT+TGG - chr2.2:54179749-54179768 None:intergenic 35.0%
AATGTAGTTGCAAGGCTTAT+GGG + chr2.2:54177088-54177107 MS.gene058197:CDS 35.0%
ACAAAACCGGGATTCTTAAT+AGG - chr2.2:54177364-54177383 None:intergenic 35.0%
ACGATGAATCAAGGATAGAA+AGG + chr2.2:54179520-54179539 MS.gene058197:CDS 35.0%
ACTATGATAAAGAAGCAGAC+AGG + chr2.2:54179318-54179337 MS.gene058197:CDS 35.0%
AGATGTAGAAGTTATGTTGG+TGG + chr2.2:54179582-54179601 MS.gene058197:CDS 35.0%
AGGGATCGTGTATCAAAAAA+TGG - chr2.2:54177160-54177179 None:intergenic 35.0%
ATAAGCCTTGCAACTACATT+AGG - chr2.2:54177088-54177107 None:intergenic 35.0%
ATATAAGCAGGATTGTTGGA+TGG - chr2.2:54177388-54177407 None:intergenic 35.0%
ATGAAGACGAAAATGGTGTT+GGG + chr2.2:54176987-54177006 MS.gene058197:CDS 35.0%
ATTGTTGGATGGAACAAAAC+CGG - chr2.2:54177377-54177396 None:intergenic 35.0%
CAAAACCGGGATTCTTAATA+GGG - chr2.2:54177363-54177382 None:intergenic 35.0%
CAATCCTGCTTATATAATGG+AGG + chr2.2:54177393-54177412 MS.gene058197:CDS 35.0%
CATTCACTACACCATTAACA+AGG + chr2.2:54178361-54178380 MS.gene058197:CDS 35.0%
GACAATCTTTGAACAAAAGC+TGG + chr2.2:54177677-54177696 MS.gene058197:CDS 35.0%
GATTGATATTGCTACCAGAT+AGG - chr2.2:54176880-54176899 None:intergenic 35.0%
GGATACAAAATGTGGACAAA+AGG + chr2.2:54179606-54179625 MS.gene058197:CDS 35.0%
GTTGGCAAAAGATGTGTATA+AGG + chr2.2:54179656-54179675 MS.gene058197:CDS 35.0%
TAATGTAGTTGCAAGGCTTA+TGG + chr2.2:54177087-54177106 MS.gene058197:CDS 35.0%
TAATTTCTTACGCGATTTCG+AGG - chr2.2:54176681-54176700 None:intergenic 35.0%
TCTCATCAGAATCTACTCAA+AGG + chr2.2:54177620-54177639 MS.gene058197:CDS 35.0%
TCTTTGAACAAAAGCTGGAA+TGG + chr2.2:54177682-54177701 MS.gene058197:CDS 35.0%
TGATTGTGTGAGTGAATGTA+TGG + chr2.2:54179554-54179573 MS.gene058197:CDS 35.0%
TGCTTGATACAGACAATACA+AGG + chr2.2:54178469-54178488 MS.gene058197:CDS 35.0%
TGGTAGATCATCAACTACAT+GGG + chr2.2:54179362-54179381 MS.gene058197:CDS 35.0%
TTGGTAGATCATCAACTACA+TGG + chr2.2:54179361-54179380 MS.gene058197:CDS 35.0%
! AATGCTGTGAAGTGTTTACA+GGG + chr2.2:54177655-54177674 MS.gene058197:CDS 35.0%
! AGTTCTTGAGCCTTCATTTT+CGG + chr2.2:54179034-54179053 MS.gene058197:CDS 35.0%
! CAATGATGATTCTGGAAGAT+TGG - chr2.2:54178703-54178722 None:intergenic 35.0%
! GGTCTAGTAATAACCTTTTG+AGG - chr2.2:54177262-54177281 None:intergenic 35.0%
! TCTGTAGACCTTTTCTTTCT+AGG - chr2.2:54178201-54178220 None:intergenic 35.0%
! TTTTTCTGAGCATTTGCCTT+AGG - chr2.2:54177898-54177917 None:intergenic 35.0%
!! AGAAGTATTGCCTCCAAAAT+CGG + chr2.2:54177300-54177319 MS.gene058197:CDS 35.0%
!! ATATGCAGAGTCTTTGAAAC+AGG + chr2.2:54176818-54176837 MS.gene058197:intron 35.0%
!! CAGGCCTAACTTTTTGTTTA+TGG - chr2.2:54178831-54178850 None:intergenic 35.0%
!! CTGTTCTAAAAGGATACCTA+AGG - chr2.2:54178529-54178548 None:intergenic 35.0%
!! GAGGTTGATGCTTATGAATT+TGG + chr2.2:54179771-54179790 MS.gene058197:CDS 35.0%
!!! CCTTTTAGAACAGAAGTTGA+GGG + chr2.2:54178536-54178555 MS.gene058197:CDS 35.0%
!!! TCCTTTTAGAACAGAAGTTG+AGG + chr2.2:54178535-54178554 MS.gene058197:CDS 35.0%
AACACAAAATTGCCTGTACC+TGG - chr2.2:54176725-54176744 None:intergenic 40.0%
AACTCTGCATCAGATTCAGT+AGG - chr2.2:54179267-54179286 None:intergenic 40.0%
AAGTCAGATTTACCAGGTAC+AGG + chr2.2:54176710-54176729 MS.gene058197:intron 40.0%
AAGTTGAGGGAATTGACAAG+TGG + chr2.2:54178549-54178568 MS.gene058197:CDS 40.0%
ACTGAAGATGTCGCAATAAG+AGG - chr2.2:54177541-54177560 None:intergenic 40.0%
ATCAGTACCATCTAAGCCAT+TGG + chr2.2:54178008-54178027 MS.gene058197:CDS 40.0%
ATTTGCCTTAGGTGGTTGAT+TGG - chr2.2:54177887-54177906 None:intergenic 40.0%
CAAGGTAGAAAAGTTACGAC+TGG + chr2.2:54178042-54178061 MS.gene058197:CDS 40.0%
CAGCTTCTTCAACATCAACT+AGG + chr2.2:54179295-54179314 MS.gene058197:CDS 40.0%
CAGCTTTCAACCGAAAATGA+AGG - chr2.2:54179047-54179066 None:intergenic 40.0%
CTCTCATCTATTCAACCAGT+TGG + chr2.2:54179470-54179489 MS.gene058197:CDS 40.0%
GAAAGGGATGAGAGATTCAA+TGG + chr2.2:54179692-54179711 MS.gene058197:CDS 40.0%
GAAATCCAATCAACCACCTA+AGG + chr2.2:54177879-54177898 MS.gene058197:CDS 40.0%
GACAATACAAGGTCTCCAAT+AGG + chr2.2:54178480-54178499 MS.gene058197:CDS 40.0%
GACAGTTTAAACAGTAGCTG+TGG + chr2.2:54178657-54178676 MS.gene058197:CDS 40.0%
GATGAAGACGAAAATGGTGT+TGG + chr2.2:54176986-54177005 MS.gene058197:CDS 40.0%
GCATCAAAGTCAGATTTACC+AGG + chr2.2:54176704-54176723 MS.gene058197:CDS 40.0%
GGAGACTTAACAGATGTTTC+CGG - chr2.2:54177712-54177731 None:intergenic 40.0%
GGGATCTTCTAGCAATTTCA+TGG + chr2.2:54177228-54177247 MS.gene058197:CDS 40.0%
GGTGAAAAGAAAAGACTGGT+TGG + chr2.2:54179638-54179657 MS.gene058197:CDS 40.0%
GTGAATGTTCAAAGAAGGGA+AGG + chr2.2:54177802-54177821 MS.gene058197:CDS 40.0%
GTGGACAAAAGGGTTTGAAA+TGG + chr2.2:54179617-54179636 MS.gene058197:CDS 40.0%
GTTACAAGTGATGACACATG+TGG + chr2.2:54177052-54177071 MS.gene058197:CDS 40.0%
TAGCCAATATGGAAAGTGGT+TGG + chr2.2:54179743-54179762 MS.gene058197:CDS 40.0%
TCAAGAACTGAGATTGGACT+TGG - chr2.2:54179023-54179042 None:intergenic 40.0%
TCTGTTGCAATCCTAGATTG+AGG - chr2.2:54178611-54178630 None:intergenic 40.0%
TGAGTAGCCAATATGGAAAG+TGG + chr2.2:54179739-54179758 MS.gene058197:CDS 40.0%
TGATGTTGAAGAAGCTGAGT+CGG - chr2.2:54179292-54179311 None:intergenic 40.0%
TGGAAAGTGGTTGGATTATG+AGG + chr2.2:54179752-54179771 MS.gene058197:CDS 40.0%
TTAGATTCTTTGCCTCCTTC+CGG + chr2.2:54177112-54177131 MS.gene058197:CDS 40.0%
TTGGAAACCAATGGCTTAGA+TGG - chr2.2:54178018-54178037 None:intergenic 40.0%
TTGGTGGAGGATACAAAATG+TGG + chr2.2:54179598-54179617 MS.gene058197:CDS 40.0%
TTGTCCCCTATTAAGAATCC+CGG + chr2.2:54177355-54177374 MS.gene058197:CDS 40.0%
TTGTTGGATGGAACAAAACC+GGG - chr2.2:54177376-54177395 None:intergenic 40.0%
! AACTTTTCTACCTTGCGAGT+TGG - chr2.2:54178037-54178056 None:intergenic 40.0%
! ATCAAAAAATGGCGTCGAGT+AGG - chr2.2:54177149-54177168 None:intergenic 40.0%
! CCCTCAACTTCTGTTCTAAA+AGG - chr2.2:54178539-54178558 None:intergenic 40.0%
! CGACATCTTCAGTAGCTTTT+AGG + chr2.2:54177548-54177567 MS.gene058197:CDS 40.0%
! GAATGCTGTGAAGTGTTTAC+AGG + chr2.2:54177654-54177673 MS.gene058197:CDS 40.0%
! TCAAAAAATGGCGTCGAGTA+GGG - chr2.2:54177148-54177167 None:intergenic 40.0%
! TCATGTCGAGATGCTCTTTT+TGG - chr2.2:54177861-54177880 None:intergenic 40.0%
! TGAAGACGAAAATGGTGTTG+GGG + chr2.2:54176988-54177007 MS.gene058197:CDS 40.0%
! TGATTCTGGAAGATTGGTCA+AGG - chr2.2:54178697-54178716 None:intergenic 40.0%
! TGTAGAAGTTATGTTGGTGG+AGG + chr2.2:54179585-54179604 MS.gene058197:CDS 40.0%
!! TTCAATGGTTGATGAGCTTG+TGG + chr2.2:54179707-54179726 MS.gene058197:CDS 40.0%
!!! ATTGATCTTGCCGATTTTGG+AGG - chr2.2:54177313-54177332 None:intergenic 40.0%
!!! CTTCAGTAGCTTTTAGGACT+CGG + chr2.2:54177554-54177573 MS.gene058197:CDS 40.0%
!!! GGAATTGATCTTGCCGATTT+TGG - chr2.2:54177316-54177335 None:intergenic 40.0%
!!! TTCAGTAGCTTTTAGGACTC+GGG + chr2.2:54177555-54177574 MS.gene058197:CDS 40.0%
AAAGGTCTACAGACAAGGAC+TGG + chr2.2:54178208-54178227 MS.gene058197:CDS 45.0%
AACCAGTTGGAAAGCCGAAA+GGG + chr2.2:54179483-54179502 MS.gene058197:CDS 45.0%
ACACTTCACAGCATTCGACT+CGG - chr2.2:54177650-54177669 None:intergenic 45.0%
ACCGGTGGCAGAAATTTGAT+GGG + chr2.2:54177835-54177854 MS.gene058197:CDS 45.0%
ACGACTGGAGATTCCTCTTA+TGG + chr2.2:54178057-54178076 MS.gene058197:CDS 45.0%
ACGGATGTTATCAGTGCAGA+AGG + chr2.2:54179083-54179102 MS.gene058197:CDS 45.0%
AGCAAAGGCTAAAGCGCATT+TGG + chr2.2:54177450-54177469 MS.gene058197:CDS 45.0%
ATCATCGACGGTCTCACTAA+GGG + chr2.2:54177474-54177493 MS.gene058197:CDS 45.0%
ATCGAAAAAGTCAGCTGTGG+AGG + chr2.2:54178128-54178147 MS.gene058197:CDS 45.0%
ATGTTTGCAGGGTGATGAGA+TGG + chr2.2:54178971-54178990 MS.gene058197:intron 45.0%
CAGGTCGATGAAGACGAAAA+TGG + chr2.2:54176980-54176999 MS.gene058197:intron 45.0%
CATGGAGTCAAAGCCTCAAA+AGG + chr2.2:54177246-54177265 MS.gene058197:CDS 45.0%
CCCAGGTTCAAGAATTCTTG+CGG - chr2.2:54177422-54177441 None:intergenic 45.0%
CCGCAAGAATTCTTGAACCT+GGG + chr2.2:54177419-54177438 MS.gene058197:CDS 45.0%
CTGGAGATTCCTCTTATGGA+CGG + chr2.2:54178061-54178080 MS.gene058197:CDS 45.0%
GAAGGCTCAAGAACTGAGAT+TGG - chr2.2:54179029-54179048 None:intergenic 45.0%
GAATCTTCTTCTGCGTGTGT+AGG - chr2.2:54177733-54177752 None:intergenic 45.0%
GAGCTCCTAATGTAGTTGCA+AGG + chr2.2:54177080-54177099 MS.gene058197:CDS 45.0%
GATGTCTCATTGCCACATTG+TGG - chr2.2:54176857-54176876 None:intergenic 45.0%
GCAGCCTCCATTATATAAGC+AGG - chr2.2:54177400-54177419 None:intergenic 45.0%
GGATTGCTGCTCCTTGTTAA+TGG - chr2.2:54178375-54178394 None:intergenic 45.0%
GTATTCTTTCCACCTTGTCG+AGG - chr2.2:54178411-54178430 None:intergenic 45.0%
TCAAGAGCGACGATGAATCA+AGG + chr2.2:54179511-54179530 MS.gene058197:CDS 45.0%
TCGAGGTCCAATCAAACAAG+TGG - chr2.2:54176664-54176683 None:intergenic 45.0%
TCTCATTGCCACATTGTGGT+TGG - chr2.2:54176853-54176872 None:intergenic 45.0%
TGTCGGCAATTGAATGACAG+AGG - chr2.2:54178999-54179018 None:intergenic 45.0%
TTAACAAGGAGCAGCAATCC+AGG + chr2.2:54178375-54178394 MS.gene058197:CDS 45.0%
TTCTGAGCATTTGCCTTAGG+TGG - chr2.2:54177895-54177914 None:intergenic 45.0%
! AATGCGCTTTAGCCTTTGCT+TGG - chr2.2:54177450-54177469 None:intergenic 45.0%
! ATGCGCTTTAGCCTTTGCTT+GGG - chr2.2:54177449-54177468 None:intergenic 45.0%
! CATTTTCGTCTTCATCGACC+TGG - chr2.2:54176982-54177001 None:intergenic 45.0%
! CTCACTAGATTTGACTTCGC+TGG - chr2.2:54178279-54178298 None:intergenic 45.0%
! CTGAGATTGGACTTGGTTGT+CGG - chr2.2:54179016-54179035 None:intergenic 45.0%
! GGTGTTGGGGAATATGTTAG+AGG + chr2.2:54177001-54177020 MS.gene058197:CDS 45.0%
!! GGTTGATGAGCTTGTGGATA+AGG + chr2.2:54179713-54179732 MS.gene058197:CDS 45.0%
AGCGCATTTGGCATCATCGA+CGG + chr2.2:54177462-54177481 MS.gene058197:CDS 50.0%
AGTTCACAACCTCGCGAGAT+CGG - chr2.2:54179452-54179471 None:intergenic 50.0%
CAAAAGCTGGAATGGAGCAC+CGG + chr2.2:54177690-54177709 MS.gene058197:CDS 50.0%
CAACCAGTTGGAAAGCCGAA+AGG + chr2.2:54179482-54179501 MS.gene058197:CDS 50.0%
CATCATCGACGGTCTCACTA+AGG + chr2.2:54177473-54177492 MS.gene058197:CDS 50.0%
CGCTCTTGAAACCTCCCTTT+CGG - chr2.2:54179500-54179519 None:intergenic 50.0%
CGGATCGAAAAAGTCAGCTG+TGG + chr2.2:54178125-54178144 MS.gene058197:CDS 50.0%
CTGTGAATCCTCGATGAGCA+CGG + chr2.2:54179064-54179083 MS.gene058197:CDS 50.0%
GACCGGTGGCAGAAATTTGA+TGG + chr2.2:54177834-54177853 MS.gene058197:CDS 50.0%
GATAACATCCGTGCTCATCG+AGG - chr2.2:54179075-54179094 None:intergenic 50.0%
GCCCATCAAATTTCTGCCAC+CGG - chr2.2:54177839-54177858 None:intergenic 50.0%
GCCGCAAGAATTCTTGAACC+TGG + chr2.2:54177418-54177437 MS.gene058197:CDS 50.0%
GCTTCTATGCCGTCCATAAG+AGG - chr2.2:54178073-54178092 None:intergenic 50.0%
GGCAATGAGACATCCCTATC+TGG + chr2.2:54176863-54176882 MS.gene058197:CDS 50.0%
TTTGCCTCCTTCCGGTTTCT+CGG + chr2.2:54177120-54177139 MS.gene058197:CDS 50.0%
! AAGGTGGACTCTTCGCAGAA+AGG + chr2.2:54177514-54177533 MS.gene058197:CDS 50.0%
! AGGGAAGGTTTGAGTTCGAC+CGG + chr2.2:54177817-54177836 MS.gene058197:CDS 50.0%
! CCTTGCGAGTTGGAAACCAA+TGG - chr2.2:54178027-54178046 None:intergenic 50.0%
!! CCATTGGTTTCCAACTCGCA+AGG + chr2.2:54178024-54178043 MS.gene058197:CDS 50.0%
CAGTTGGAAAGCCGAAAGGG+AGG + chr2.2:54179486-54179505 MS.gene058197:CDS 55.0%
CGAGTAGGGATCCGAGAAAC+CGG - chr2.2:54177134-54177153 None:intergenic 55.0%
CTCCCTTTCGGCTTTCCAAC+TGG - chr2.2:54179488-54179507 None:intergenic 55.0%
GGACGGCATAGAAGCTCAAG+TGG + chr2.2:54178078-54178097 MS.gene058197:CDS 55.0%
GGTTCTGTGACACCTCGACA+AGG + chr2.2:54178396-54178415 MS.gene058197:CDS 55.0%
GTAATTGGCGGCGATGCCTT+AGG + chr2.2:54178510-54178529 MS.gene058197:CDS 55.0%
TAGGGATCCGAGAAACCGGA+AGG - chr2.2:54177130-54177149 None:intergenic 55.0%
TCTGTGACACCTCGACAAGG+TGG + chr2.2:54178399-54178418 MS.gene058197:CDS 55.0%
! CGCTTTAGCCTTTGCTTGGG+AGG - chr2.2:54177446-54177465 None:intergenic 55.0%
! GAAGGTTTGAGTTCGACCGG+TGG + chr2.2:54177820-54177839 MS.gene058197:CDS 55.0%
! TGTCGAGGTGTCACAGAACC+TGG - chr2.2:54178396-54178415 None:intergenic 55.0%
ACCTGGGTCCTCCCAAGCAA+AGG + chr2.2:54177435-54177454 MS.gene058197:CDS 60.0%
GGATCCGAGAAACCGGAAGG+AGG - chr2.2:54177127-54177146 None:intergenic 60.0%
AACCTCGCGAGATCGGCCGA+GGG - chr2.2:54179445-54179464 None:intergenic 65.0%
GCCTTTGCTTGGGAGGACCC+AGG - chr2.2:54177439-54177458 None:intergenic 65.0%
CAACCTCGCGAGATCGGCCG+AGG - chr2.2:54179446-54179465 None:intergenic 70.0%
TTCCCTCGGCCGATCTCGCG+AGG + chr2.2:54179440-54179459 MS.gene058197:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 54176617 54179863 54176617 ID=MS.gene058197
chr2.2 mRNA 54176617 54179863 54176617 ID=MS.gene058197.t1;Parent=MS.gene058197
chr2.2 exon 54176617 54176725 54176617 ID=MS.gene058197.t1.exon1;Parent=MS.gene058197.t1
chr2.2 CDS 54176617 54176725 54176617 ID=cds.MS.gene058197.t1;Parent=MS.gene058197.t1
chr2.2 exon 54176826 54176884 54176826 ID=MS.gene058197.t1.exon2;Parent=MS.gene058197.t1
chr2.2 CDS 54176826 54176884 54176826 ID=cds.MS.gene058197.t1;Parent=MS.gene058197.t1
chr2.2 exon 54176983 54178737 54176983 ID=MS.gene058197.t1.exon3;Parent=MS.gene058197.t1
chr2.2 CDS 54176983 54178737 54176983 ID=cds.MS.gene058197.t1;Parent=MS.gene058197.t1
chr2.2 exon 54178981 54179104 54178981 ID=MS.gene058197.t1.exon4;Parent=MS.gene058197.t1
chr2.2 CDS 54178981 54179104 54178981 ID=cds.MS.gene058197.t1;Parent=MS.gene058197.t1
chr2.2 exon 54179196 54179863 54179196 ID=MS.gene058197.t1.exon5;Parent=MS.gene058197.t1
chr2.2 CDS 54179196 54179863 54179196 ID=cds.MS.gene058197.t1;Parent=MS.gene058197.t1
Gene Sequence

>MS.gene058197

ATGGGAGTTGAAAAAGAAGGGACTAAAAATGGAGGTAGTTTTTTCCACTTGTTTGATTGGACCTCGAAATCGCGTAAGAAATTATTTGCATCAAAGTCAGATTTACCAGGTACAGGCAATTTTGTGTTTATATCCCTTGTCAATTGTATTTTTATTGTTCAGTTAATTTCATCTTTTGTTATTGGTAAATTTTTCTTCGTCATATGCAGAGTCTTTGAAACAGGAAAGAAAATCCAACCACAATGTGGCAATGAGACATCCCTATCTGGTAGCAATATCAATCACTATATCTTCAATTTTACCTGTTACTTGTACATAATTTTTTGTTATGAAATTAGCTAATTATTACATGTTTAATTCTTCCAGGTCGATGAAGACGAAAATGGTGTTGGGGAATATGTTAGAGGAAGCTGTGATCATAGTTATGCTTCATCTGTTACAAGTGATGACACATGTGGAACAAGAGCTCCTAATGTAGTTGCAAGGCTTATGGGATTAGATTCTTTGCCTCCTTCCGGTTTCTCGGATCCCTACTCGACGCCATTTTTTGATACACGATCCCTTCAAGATTCTCAGTTTCTATATTCTGGAAAGTTGGTTGAAAAAGTTGAGGGATCTTCTAGCAATTTCATGGAGTCAAAGCCTCAAAAGGTTATTACTAGACCAATTGAAAAGTTTCAAAGAGAAGTATTGCCTCCAAAATCGGCAAGATCAATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAATCCCGGTTTTGTTCCATCCAACAATCCTGCTTATATAATGGAGGCTGCCGCAAGAATTCTTGAACCTGGGTCCTCCCAAGCAAAGGCTAAAGCGCATTTGGCATCATCGACGGTCTCACTAAGGGTTAAAGATCTTAGAGATAAGGTGGACTCTTCGCAGAAAGGACCTCTTATTGCGACATCTTCAGTAGCTTTTAGGACTCGGGAGCTAAAAGAAAAAAGAGAAATTTCTCAAAGAAGAAGCAAGGTCTCATCAGAATCTACTCAAAGGTCAGCCGAGTCGAATGCTGTGAAGTGTTTACAGGGACAATCTTTGAACAAAAGCTGGAATGGAGCACCGGAAACATCTGTTAAGTCTCCTACACACGCAGAAGAAGATTCTTCTTTGAATAATAAAGGGAAGTCTGTTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTCGACCGGTGGCAGAAATTTGATGGGCCAAAAAGAGCATCTCGACATGAAATCCAATCAACCACCTAAGGCAAATGCTCAGAAAAATTTGCATAGGAAATCTTCTGGCCAGAATTCTTCTAATGTTCTCAGGCAGAATAATCTGAAACAGAACCATTCAATTGATAATAATGACAAATCAGTACCATCTAAGCCATTGGTTTCCAACTCGCAAGGTAGAAAAGTTACGACTGGAGATTCCTCTTATGGACGGCATAGAAGCTCAAGTGGTAAATCCATTGTAAAATCTAAAGTCGGATCGAAAAAGTCAGCTGTGGAGGTAACCGATAGCGAAAATGAAATTCTATACACCAGGACAAATAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGACTGGAACGATAGAGTTGTTGATAATTTGTTCATTGACAAAACTCAGAAGCCAGCGAAGTCAAATCTAGTGAGTAATAAACAATATGGTGGGACTGAAGAAGTGAAAAAGAAAGACATGGATGTAGTTTCTTTCACATTCACTACACCATTAACAAGGAGCAGCAATCCAGGTTCTGTGACACCTCGACAAGGTGGAAAGAATACTAATGATCTTTCGTTGGATCAACGCATTAAAAGAGTGTTGCTTGATACAGACAATACAAGGTCTCCAATAGGATACAATGTAATTGGCGGCGATGCCTTAGGTATCCTTTTAGAACAGAAGTTGAGGGAATTGACAAGTGGAGTTGAAACCTCTTCCAATGATGTTTCTAAAGTTAACCTCAATCTAGGATTGCAACAGAAGAAAGATCAAGATATGTCGTTTACGGACAGTTTAAACAGTAGCTGTGGTTCTAACATATCATCCTTGACCAATCTTCCAGAATCATCATTGAAACATAAATCATGGGTACGTCACAATCTCACCATATTTAAGTGATTATTATCTCTTAAGCATGTCAATATGAGTAGTATAATGTCATCAGTTTAATGGCTAAAACCATAAACAAAAAGTTAGGCCTGCTAAATTTATACTTTTTGATGGCATTGAAAATACCAAAAATTATTGAATAATCACTCTTTTATTAATTGGTGGCATTTTCGCTATGCTTTTCTTCCATTAAGTAAGTCATTAACTCAAAGATGTTTGCAGGGTGATGAGATGGAACCTCTGTCATTCAATTGCCGACAACCAAGTCCAATCTCAGTTCTTGAGCCTTCATTTTCGGTTGAAAGCTGTGAATCCTCGATGAGCACGGATGTTATCAGTGCAGAAGGTAAGTCATGCTTAAAAAGTTACTGTTGTTTGGTAGTTATTTAATTTAATGACACATGAGTGGTAATTTTTTTACTGTATATATTTTTCAGGAAGCAAGATGTTTTCATCTATTCAATCTCAAGAAATCCATGGATTTAATTTTTCAAGGAAGTTCTATCCTACTGAATCTGATGCAGAGTTATCCGACTCAGCTTCTTCAACATCAACTAGGACTATGATAAAGAAGCAGACAGGTACATTTTCTATGATGAAGTTTGGTAGATCATCAACTACATGGGAGCTAGACTATGTGAAAGAGATATTGTGCAATGTAGAGTTAATGTATATGGATTTTTCCCTCGGCCGATCTCGCGAGGTTGTGAACTCTCATCTATTCAACCAGTTGGAAAGCCGAAAGGGAGGTTTCAAGAGCGACGATGAATCAAGGATAGAAAGGAAAGTTATATTTGATTGTGTGAGTGAATGTATGGATTTGAGATGTAGAAGTTATGTTGGTGGAGGATACAAAATGTGGACAAAAGGGTTTGAAATGGTGAAAAGAAAAGACTGGTTGGCAAAAGATGTGTATAAGGAAATTTTGAGTTTGAAAGGGATGAGAGATTCAATGGTTGATGAGCTTGTGGATAAGGATATGAGTAGCCAATATGGAAAGTGGTTGGATTATGAGGTTGATGCTTATGAATTTGGAGAAGAAGTTGTTGATCAAATATTTAATTCTTTGGTTGATGATGTTGTCTATGAAATGTTGCAATTTTAA

Protein sequence

>MS.gene058197.t1

MGVEKEGTKNGGSFFHLFDWTSKSRKKLFASKSDLPESLKQERKSNHNVAMRHPYLVDEDENGVGEYVRGSCDHSYASSVTSDDTCGTRAPNVVARLMGLDSLPPSGFSDPYSTPFFDTRSLQDSQFLYSGKLVEKVEGSSSNFMESKPQKVITRPIEKFQREVLPPKSARSIPVTHHKLLSPIKNPGFVPSNNPAYIMEAAARILEPGSSQAKAKAHLASSTVSLRVKDLRDKVDSSQKGPLIATSSVAFRTRELKEKREISQRRSKVSSESTQRSAESNAVKCLQGQSLNKSWNGAPETSVKSPTHAEEDSSLNNKGKSVSLAIQAKVNVQRREGLSSTGGRNLMGQKEHLDMKSNQPPKANAQKNLHRKSSGQNSSNVLRQNNLKQNHSIDNNDKSVPSKPLVSNSQGRKVTTGDSSYGRHRSSSGKSIVKSKVGSKKSAVEVTDSENEILYTRTNNFPRKKRSTDKDWNDRVVDNLFIDKTQKPAKSNLVSNKQYGGTEEVKKKDMDVVSFTFTTPLTRSSNPGSVTPRQGGKNTNDLSLDQRIKRVLLDTDNTRSPIGYNVIGGDALGILLEQKLRELTSGVETSSNDVSKVNLNLGLQQKKDQDMSFTDSLNSSCGSNISSLTNLPESSLKHKSWGDEMEPLSFNCRQPSPISVLEPSFSVESCESSMSTDVISAEGSKMFSSIQSQEIHGFNFSRKFYPTESDAELSDSASSTSTRTMIKKQTGTFSMMKFGRSSTTWELDYVKEILCNVELMYMDFSLGRSREVVNSHLFNQLESRKGGFKSDDESRIERKVIFDCVSECMDLRCRSYVGGGYKMWTKGFEMVKRKDWLAKDVYKEILSLKGMRDSMVDELVDKDMSSQYGKWLDYEVDAYEFGEEVVDQIFNSLVDDVVYEMLQF