Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071752.t1 | XP_024627239.1 | 96 | 501 | 20 | 0 | 1 | 501 | 802 | 1302 | 5.10E-259 | 903.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071752.t1 | A0A1P8BH59 | 27.8 | 497 | 235 | 10 | 1 | 495 | 855 | 1229 | 5.3e-39 | 163.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071752.t1 | G7KRQ7 | 96.0 | 501 | 20 | 0 | 1 | 501 | 802 | 1302 | 3.7e-259 | 903.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049958 | MS.gene071752 | 0.816771 | 4.66E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071752.t1 | MTR_7g090500 | 96.008 | 501 | 20 | 0 | 1 | 501 | 802 | 1302 | 0.0 | 982 |
| MS.gene071752.t1 | MTR_7g090500 | 67.808 | 146 | 41 | 1 | 1 | 146 | 454 | 593 | 4.81e-53 | 194 |
| MS.gene071752.t1 | MTR_7g090500 | 43.716 | 183 | 94 | 3 | 318 | 497 | 360 | 536 | 7.83e-34 | 136 |
| MS.gene071752.t1 | MTR_7g090500 | 41.954 | 174 | 95 | 2 | 325 | 497 | 716 | 884 | 2.95e-31 | 129 |
| MS.gene071752.t1 | MTR_3g020820 | 60.000 | 90 | 36 | 0 | 408 | 497 | 564 | 653 | 1.61e-26 | 114 |
| MS.gene071752.t1 | MTR_3g020820 | 50.000 | 74 | 37 | 0 | 10 | 83 | 580 | 653 | 8.07e-15 | 77.8 |
| MS.gene071752.t1 | MTR_4g071030 | 55.670 | 97 | 42 | 1 | 405 | 500 | 613 | 709 | 1.41e-24 | 108 |
| MS.gene071752.t1 | MTR_4g071030 | 43.617 | 94 | 53 | 0 | 1 | 94 | 624 | 717 | 8.50e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071752.t1 | AT5G04020 | 39.344 | 244 | 93 | 7 | 256 | 498 | 1297 | 1486 | 5.52e-35 | 140 |
| MS.gene071752.t1 | AT5G04020 | 31.950 | 241 | 132 | 4 | 255 | 495 | 1021 | 1229 | 3.98e-31 | 128 |
| MS.gene071752.t1 | AT5G04020 | 53.191 | 94 | 42 | 1 | 405 | 496 | 845 | 938 | 3.88e-22 | 101 |
| MS.gene071752.t1 | AT5G04020 | 51.852 | 81 | 39 | 0 | 1 | 81 | 1403 | 1483 | 2.30e-18 | 89.4 |
| MS.gene071752.t1 | AT5G04020 | 45.918 | 98 | 46 | 2 | 400 | 497 | 502 | 592 | 9.10e-18 | 87.4 |
| MS.gene071752.t1 | AT5G04020 | 45.918 | 98 | 51 | 1 | 1 | 96 | 855 | 952 | 2.00e-16 | 83.2 |
| MS.gene071752.t1 | AT5G04020 | 41.509 | 106 | 61 | 1 | 1 | 106 | 1149 | 1253 | 7.31e-16 | 81.6 |
| MS.gene071752.t1 | AT5G04020 | 38.596 | 114 | 61 | 3 | 1 | 113 | 517 | 622 | 2.41e-13 | 73.6 |
| MS.gene071752.t1 | AT5G04020 | 39.344 | 244 | 93 | 7 | 256 | 498 | 1297 | 1486 | 5.52e-35 | 140 |
| MS.gene071752.t1 | AT5G04020 | 31.950 | 241 | 132 | 4 | 255 | 495 | 1021 | 1229 | 3.98e-31 | 128 |
| MS.gene071752.t1 | AT5G04020 | 53.191 | 94 | 42 | 1 | 405 | 496 | 845 | 938 | 3.88e-22 | 101 |
| MS.gene071752.t1 | AT5G04020 | 51.852 | 81 | 39 | 0 | 1 | 81 | 1403 | 1483 | 2.30e-18 | 89.4 |
| MS.gene071752.t1 | AT5G04020 | 45.918 | 98 | 46 | 2 | 400 | 497 | 502 | 592 | 9.10e-18 | 87.4 |
| MS.gene071752.t1 | AT5G04020 | 45.918 | 98 | 51 | 1 | 1 | 96 | 855 | 952 | 2.00e-16 | 83.2 |
| MS.gene071752.t1 | AT5G04020 | 41.509 | 106 | 61 | 1 | 1 | 106 | 1149 | 1253 | 7.31e-16 | 81.6 |
| MS.gene071752.t1 | AT5G04020 | 38.596 | 114 | 61 | 3 | 1 | 113 | 517 | 622 | 2.41e-13 | 73.6 |
| MS.gene071752.t1 | AT2G38800 | 57.647 | 85 | 36 | 0 | 413 | 497 | 509 | 593 | 1.42e-25 | 110 |
| MS.gene071752.t1 | AT2G38800 | 47.561 | 82 | 43 | 0 | 2 | 83 | 512 | 593 | 3.56e-17 | 85.1 |
| MS.gene071752.t1 | AT3G54570 | 57.895 | 76 | 32 | 0 | 422 | 497 | 341 | 416 | 7.70e-21 | 95.1 |
| MS.gene071752.t1 | AT3G54570 | 44.737 | 76 | 42 | 0 | 8 | 83 | 341 | 416 | 4.76e-13 | 71.2 |
Find 94 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAATTTCTAGACAGTTTC+TGG | 0.106013 | 7.4:+18192052 | None:intergenic |
| CTTCCTAGCCGGGGTTAATT+TGG | 0.166463 | 7.4:+18191828 | None:intergenic |
| GTCAATTCTCTTGGTCTTCT+TGG | 0.181117 | 7.4:+18193203 | None:intergenic |
| AAGATCACTGAGATCTAATT+TGG | 0.203250 | 7.4:-18192637 | MS.gene071752:CDS |
| CCAATTCAAGATGCTGAAAA+TGG | 0.240095 | 7.4:-18193005 | MS.gene071752:CDS |
| AATAGGTTTGAAGGGGCTTC+TGG | 0.247829 | 7.4:+18192609 | None:intergenic |
| ATAGTTTCTACTGGCTTAAT+AGG | 0.259146 | 7.4:+18192813 | None:intergenic |
| CTGTTGTTGGTTCATCTAAT+AGG | 0.279218 | 7.4:+18192592 | None:intergenic |
| ACCAGAAACTGTCTAGAAAT+TGG | 0.290294 | 7.4:-18192053 | MS.gene071752:CDS |
| CTTCCGATGTTTGGCGGTTA+AGG | 0.304330 | 7.4:+18193147 | None:intergenic |
| GTGATCTTACAAGACCATTC+AGG | 0.324754 | 7.4:+18192652 | None:intergenic |
| TGCGTCTTCTACCATCTTGA+TGG | 0.339841 | 7.4:+18192248 | None:intergenic |
| TTGTTTCTCTAGCTGATTCT+CGG | 0.340174 | 7.4:+18192500 | None:intergenic |
| TCAGGAAGTGGCTGTGTGTC+TGG | 0.347530 | 7.4:+18192210 | None:intergenic |
| TCTTCTGAATCGGGTTCTAA+TGG | 0.357240 | 7.4:+18191940 | None:intergenic |
| AAAGATCAAAAGATGGAATC+TGG | 0.362063 | 7.4:-18192135 | MS.gene071752:CDS |
| TTAATAGGCTTGCAAAGTTC+AGG | 0.387230 | 7.4:+18192828 | None:intergenic |
| AACTTCATCGACCATTCGTT+TGG | 0.389537 | 7.4:+18192764 | None:intergenic |
| TTCTGCAACAGTGGAATCTC+AGG | 0.406186 | 7.4:-18192973 | MS.gene071752:CDS |
| GTCACTCTTTGTCTTTGAGC+TGG | 0.410099 | 7.4:+18193059 | None:intergenic |
| GGTAGATATCTAGGCTCTCT+TGG | 0.413052 | 7.4:+18191961 | None:intergenic |
| AAATCTGATACCAGATCTTC+TGG | 0.413137 | 7.4:+18192741 | None:intergenic |
| TTTCTAGACAGTTTCTGGTT+CGG | 0.425984 | 7.4:+18192057 | None:intergenic |
| CTGTCAATTGTGCTGTTGTC+AGG | 0.427341 | 7.4:+18192192 | None:intergenic |
| GATTCTACAACAGCACTTGT+AGG | 0.430522 | 7.4:+18192522 | None:intergenic |
| TGCCACATCAGTTGATGTCT+TGG | 0.431113 | 7.4:+18192413 | None:intergenic |
| ACATCTTTGATGTCTGTTGT+TGG | 0.435599 | 7.4:+18192579 | None:intergenic |
| TAGGAGATTCATCAAGGCAT+TGG | 0.436395 | 7.4:-18192004 | MS.gene071752:CDS |
| AACAGCACAATTGACAGAAC+TGG | 0.437768 | 7.4:-18192186 | MS.gene071752:CDS |
| CAAAAGATGGAATCTGGAAA+TGG | 0.438745 | 7.4:-18192129 | MS.gene071752:CDS |
| TCAATTGAGGCATCAAGATA+TGG | 0.438891 | 7.4:-18191908 | MS.gene071752:CDS |
| GCATCTGAAGTCAATTCTCT+TGG | 0.443920 | 7.4:+18193194 | None:intergenic |
| GGTTCTAATGGTAGATATCT+AGG | 0.445208 | 7.4:+18191952 | None:intergenic |
| TTCTCTCTTCCGATGTTTGG+CGG | 0.448219 | 7.4:+18193141 | None:intergenic |
| CGATGAAGTTCCAGAAGATC+TGG | 0.450041 | 7.4:-18192751 | MS.gene071752:CDS |
| GGTTCATCTAATAGGTTTGA+AGG | 0.454459 | 7.4:+18192600 | None:intergenic |
| TTATCTGCTAAGACATTGCT+TGG | 0.461003 | 7.4:-18192915 | MS.gene071752:CDS |
| AAAAGCTAATCATGTTGAAA+AGG | 0.461501 | 7.4:-18193262 | None:intergenic |
| CGCCACAGCACGATCTTTGA+AGG | 0.468626 | 7.4:+18192302 | None:intergenic |
| GCTTGACTATGCACTTCAAA+AGG | 0.468681 | 7.4:-18193099 | MS.gene071752:CDS |
| GGCTTGCAAAGTTCAGGCAT+TGG | 0.469075 | 7.4:+18192834 | None:intergenic |
| CAACTGCTTATAGTTTCTAC+TGG | 0.472255 | 7.4:+18192804 | None:intergenic |
| TCATCGACCATTCGTTTGGT+TGG | 0.476110 | 7.4:+18192768 | None:intergenic |
| GCTTGATTATGCACTTAGAC+AGG | 0.478746 | 7.4:-18191857 | MS.gene071752:CDS |
| CTTCAGATGCCAACTTCGAA+GGG | 0.481812 | 7.4:-18193181 | MS.gene071752:CDS |
| GTAGATATCTAGGCTCTCTT+GGG | 0.482666 | 7.4:+18191962 | None:intergenic |
| ACAAGAGAAACTTCTGTCTC+TGG | 0.487251 | 7.4:-18192357 | MS.gene071752:CDS |
| ACTAAAAGCTTAATCCTGAA+TGG | 0.489288 | 7.4:-18192666 | MS.gene071752:CDS |
| ACAAAATCCAAGGATGTCAT+TGG | 0.489496 | 7.4:-18192714 | MS.gene071752:CDS |
| CATGTTGAAAAGGTTTGTAA+AGG | 0.491924 | 7.4:-18193252 | MS.gene071752:CDS |
| GTTTGTAAAGGCATTAGATA+AGG | 0.492442 | 7.4:-18193240 | MS.gene071752:CDS |
| AAAGAAAAGGCACAGAAGAA+TGG | 0.501317 | 7.4:-18191882 | MS.gene071752:CDS |
| ATGACCACCAATGACATCCT+TGG | 0.502011 | 7.4:+18192707 | None:intergenic |
| CTAGAGAAACAAGGCAGCAC+AGG | 0.502444 | 7.4:-18192489 | MS.gene071752:CDS |
| GAGAAAAGTGGAGCTGTTGG+TGG | 0.508165 | 7.4:-18191806 | MS.gene071752:CDS |
| CAAGATATGGCAGAAAGAAA+AGG | 0.510869 | 7.4:-18191895 | MS.gene071752:CDS |
| ACTTCAGATGCCAACTTCGA+AGG | 0.511765 | 7.4:-18193182 | MS.gene071752:CDS |
| GTTCATCTAATAGGTTTGAA+GGG | 0.514010 | 7.4:+18192601 | None:intergenic |
| ATTGTGCTGTTGTCAGGAAG+TGG | 0.532899 | 7.4:+18192198 | None:intergenic |
| CAGCACAGGACTGTGGTTCA+CGG | 0.538685 | 7.4:-18192475 | MS.gene071752:CDS |
| AAAAGAAGAATCAGTATCAA+AGG | 0.544289 | 7.4:-18192091 | MS.gene071752:CDS |
| AAGGATGTCATTGGTGGTCA+TGG | 0.553583 | 7.4:-18192705 | MS.gene071752:CDS |
| CTTCAAAGATCGTGCTGTGG+CGG | 0.555017 | 7.4:-18192301 | MS.gene071752:CDS |
| GAAGAGAAAAGTGGAGCTGT+TGG | 0.558888 | 7.4:-18191809 | MS.gene071752:CDS |
| ACTTCTTAGGAGATTCATCA+AGG | 0.560611 | 7.4:-18192010 | MS.gene071752:CDS |
| ATCGCGATCTTCTGCAACAG+TGG | 0.563189 | 7.4:-18192982 | MS.gene071752:CDS |
| ACTGGAGAAATTTACAGTGA+AGG | 0.567602 | 7.4:-18192168 | MS.gene071752:CDS |
| TTCATCTAATAGGTTTGAAG+GGG | 0.585327 | 7.4:+18192602 | None:intergenic |
| AAATCCAAGGATGTCATTGG+TGG | 0.586783 | 7.4:-18192711 | MS.gene071752:CDS |
| GAAGCATCAAGTGATTGACT+TGG | 0.589095 | 7.4:+18192945 | None:intergenic |
| CCCGGCTAGGAAGAGAAAAG+TGG | 0.589984 | 7.4:-18191818 | MS.gene071752:CDS |
| TTTCCAAATTAACCCCGGCT+AGG | 0.593973 | 7.4:-18191831 | MS.gene071752:CDS |
| TCTTGATGGCTTCAATCTGT+CGG | 0.596612 | 7.4:+18192262 | None:intergenic |
| GAAGTGGCTGTGTGTCTGGA+AGG | 0.602919 | 7.4:+18192214 | None:intergenic |
| GGCATATCTTGAATAACCAC+AGG | 0.606171 | 7.4:+18192324 | None:intergenic |
| AACTATAAGCAGTTGTCATG+AGG | 0.608415 | 7.4:-18192796 | MS.gene071752:CDS |
| TTTCCTTAACCGCCAAACAT+CGG | 0.614681 | 7.4:-18193150 | MS.gene071752:CDS |
| ACAGATTGAAGCCATCAAGA+TGG | 0.615714 | 7.4:-18192259 | MS.gene071752:CDS |
| GTTCACGGTGTTTAAGCACA+TGG | 0.618898 | 7.4:-18192460 | MS.gene071752:CDS |
| AGATTTGAATACAAAATCCA+AGG | 0.620348 | 7.4:-18192724 | MS.gene071752:CDS |
| ATCTGGAAATGGAATAGCCG+AGG | 0.625733 | 7.4:-18192118 | MS.gene071752:CDS |
| TATAAGCAGTTGTCATGAGG+AGG | 0.629021 | 7.4:-18192793 | MS.gene071752:CDS |
| AACAACAGACATCAAAGATG+TGG | 0.636758 | 7.4:-18192577 | MS.gene071752:CDS |
| GGTTGTTTCCAAATTAACCC+CGG | 0.637450 | 7.4:-18191836 | MS.gene071752:CDS |
| TTCCAAGACATCAACTGATG+TGG | 0.642657 | 7.4:-18192415 | MS.gene071752:CDS |
| GCCACAGCACGATCTTTGAA+GGG | 0.645871 | 7.4:+18192303 | None:intergenic |
| GGAGGCTCCAACCAAACGAA+TGG | 0.648909 | 7.4:-18192775 | MS.gene071752:CDS |
| CTCTGGTGAAAGTACACCTG+TGG | 0.652581 | 7.4:-18192340 | MS.gene071752:CDS |
| GAGAATCAGCTAGAGAAACA+AGG | 0.663713 | 7.4:-18192498 | MS.gene071752:CDS |
| AGAAGAATCAGTATCAAAGG+AGG | 0.668259 | 7.4:-18192088 | MS.gene071752:CDS |
| GCCCTTCAAAGATCGTGCTG+TGG | 0.671017 | 7.4:-18192304 | MS.gene071752:CDS |
| TTCAGATGCCAACTTCGAAG+GGG | 0.679519 | 7.4:-18193180 | MS.gene071752:CDS |
| AACAAGGCAGCACAGGACTG+TGG | 0.680675 | 7.4:-18192482 | MS.gene071752:CDS |
| TGTCTTAGCAGATAAAACTG+AGG | 0.721934 | 7.4:+18192923 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAAGAAGAATCAGTATCAA+AGG | - | chr7.4:18192928-18192947 | MS.gene071752:CDS | 25.0% |
| ! | AAGATGAAAAAGTTCAATTG+AGG | - | chr7.4:18193098-18193117 | MS.gene071752:CDS | 25.0% |
| ! | AGATTTGAATACAAAATCCA+AGG | - | chr7.4:18192295-18192314 | MS.gene071752:CDS | 25.0% |
| ! | TTAAAAAAGTGGTACTTCTT+AGG | - | chr7.4:18192996-18193015 | MS.gene071752:CDS | 25.0% |
| !! | ATTCCATCTTTTGATCTTTT+TGG | + | chr7.4:18192883-18192902 | None:intergenic | 25.0% |
| !!! | AACTTTTTCATCTTCTGAAT+CGG | + | chr7.4:18193092-18193111 | None:intergenic | 25.0% |
| AAAGATCAAAAGATGGAATC+TGG | - | chr7.4:18192884-18192903 | MS.gene071752:CDS | 30.0% | |
| AAGATCACTGAGATCTAATT+TGG | - | chr7.4:18192382-18192401 | MS.gene071752:CDS | 30.0% | |
| ACTAAAAGCTTAATCCTGAA+TGG | - | chr7.4:18192353-18192372 | MS.gene071752:CDS | 30.0% | |
| ATCGGAAGAGAGAAAAAAAT+CGG | - | chr7.4:18191887-18191906 | MS.gene071752:CDS | 30.0% | |
| GAACCAAAAAGATCAAAAGA+TGG | - | chr7.4:18192877-18192896 | MS.gene071752:CDS | 30.0% | |
| GTTCATCTAATAGGTTTGAA+GGG | + | chr7.4:18192421-18192440 | None:intergenic | 30.0% | |
| TGTGGTTAAAAAAGATCAAC+TGG | - | chr7.4:18192460-18192479 | MS.gene071752:CDS | 30.0% | |
| TTCATCTAATAGGTTTGAAG+GGG | + | chr7.4:18192420-18192439 | None:intergenic | 30.0% | |
| TTGGAGCAATCTTAAAAAAG+TGG | - | chr7.4:18192985-18193004 | MS.gene071752:CDS | 30.0% | |
| !! | ATAGTTTCTACTGGCTTAAT+AGG | + | chr7.4:18192209-18192228 | None:intergenic | 30.0% |
| !! | GTTTGTAAAGGCATTAGATA+AGG | - | chr7.4:18191779-18191798 | MS.gene071752:CDS | 30.0% |
| !!! | ACTTTTTCATCTTCTGAATC+GGG | + | chr7.4:18193091-18193110 | None:intergenic | 30.0% |
| !!! | TAGAAGCTTTTGAAACACTT+CGG | - | chr7.4:18191991-18192010 | MS.gene071752:CDS | 30.0% |
| AAATCTGATACCAGATCTTC+TGG | + | chr7.4:18192281-18192300 | None:intergenic | 35.0% | |
| AACAACAGACATCAAAGATG+TGG | - | chr7.4:18192442-18192461 | MS.gene071752:CDS | 35.0% | |
| AACTATAAGCAGTTGTCATG+AGG | - | chr7.4:18192223-18192242 | MS.gene071752:CDS | 35.0% | |
| ACAAAATCCAAGGATGTCAT+TGG | - | chr7.4:18192305-18192324 | MS.gene071752:CDS | 35.0% | |
| ACATCTTTGATGTCTGTTGT+TGG | + | chr7.4:18192443-18192462 | None:intergenic | 35.0% | |
| ACCAGAAACTGTCTAGAAAT+TGG | - | chr7.4:18192966-18192985 | MS.gene071752:CDS | 35.0% | |
| ACTGGAGAAATTTACAGTGA+AGG | - | chr7.4:18192851-18192870 | MS.gene071752:CDS | 35.0% | |
| ACTTCTTAGGAGATTCATCA+AGG | - | chr7.4:18193009-18193028 | MS.gene071752:CDS | 35.0% | |
| AGAAGAATCAGTATCAAAGG+AGG | - | chr7.4:18192931-18192950 | MS.gene071752:CDS | 35.0% | |
| AGAGAAAAAAATCGGAAGAG+TGG | - | chr7.4:18191895-18191914 | MS.gene071752:CDS | 35.0% | |
| CAAAAGATGGAATCTGGAAA+TGG | - | chr7.4:18192890-18192909 | MS.gene071752:CDS | 35.0% | |
| CAACTGCTTATAGTTTCTAC+TGG | + | chr7.4:18192218-18192237 | None:intergenic | 35.0% | |
| CAAGATATGGCAGAAAGAAA+AGG | - | chr7.4:18193124-18193143 | MS.gene071752:CDS | 35.0% | |
| CCAATTCAAGATGCTGAAAA+TGG | - | chr7.4:18192014-18192033 | MS.gene071752:CDS | 35.0% | |
| GGTTCATCTAATAGGTTTGA+AGG | + | chr7.4:18192422-18192441 | None:intergenic | 35.0% | |
| TGTCTTAGCAGATAAAACTG+AGG | + | chr7.4:18192099-18192118 | None:intergenic | 35.0% | |
| TTAATAGGCTTGCAAAGTTC+AGG | + | chr7.4:18192194-18192213 | None:intergenic | 35.0% | |
| TTATCTGCTAAGACATTGCT+TGG | - | chr7.4:18192104-18192123 | MS.gene071752:CDS | 35.0% | |
| ! | AAAGAAAAGGCACAGAAGAA+TGG | - | chr7.4:18193137-18193156 | MS.gene071752:CDS | 35.0% |
| ! | CCATTTTCAGCATCTTGAAT+TGG | + | chr7.4:18192017-18192036 | None:intergenic | 35.0% |
| ! | GGTTCTAATGGTAGATATCT+AGG | + | chr7.4:18193070-18193089 | None:intergenic | 35.0% |
| ! | TCAATTGAGGCATCAAGATA+TGG | - | chr7.4:18193111-18193130 | MS.gene071752:CDS | 35.0% |
| ! | TCCAATTTCTAGACAGTTTC+TGG | + | chr7.4:18192970-18192989 | None:intergenic | 35.0% |
| ! | TGATTCTTCTTTTCGTTCCT+CGG | + | chr7.4:18192921-18192940 | None:intergenic | 35.0% |
| ! | TTGTTTCTCTAGCTGATTCT+CGG | + | chr7.4:18192522-18192541 | None:intergenic | 35.0% |
| ! | TTTTTCTCTCTTCCGATGTT+TGG | + | chr7.4:18191884-18191903 | None:intergenic | 35.0% |
| !! | CTGTTGTTGGTTCATCTAAT+AGG | + | chr7.4:18192430-18192449 | None:intergenic | 35.0% |
| !! | TCAAGGCATTGGAAAAAGTA+AGG | - | chr7.4:18193026-18193045 | MS.gene071752:CDS | 35.0% |
| !! | TTTCTAGACAGTTTCTGGTT+CGG | + | chr7.4:18192965-18192984 | None:intergenic | 35.0% |
| AAATCCAAGGATGTCATTGG+TGG | - | chr7.4:18192308-18192327 | MS.gene071752:CDS | 40.0% | |
| AACAGCACAATTGACAGAAC+TGG | - | chr7.4:18192833-18192852 | MS.gene071752:CDS | 40.0% | |
| AACTTCATCGACCATTCGTT+TGG | + | chr7.4:18192258-18192277 | None:intergenic | 40.0% | |
| ACAAGAGAAACTTCTGTCTC+TGG | - | chr7.4:18192662-18192681 | MS.gene071752:CDS | 40.0% | |
| ACAGATTGAAGCCATCAAGA+TGG | - | chr7.4:18192760-18192779 | MS.gene071752:CDS | 40.0% | |
| GAGAATCAGCTAGAGAAACA+AGG | - | chr7.4:18192521-18192540 | MS.gene071752:CDS | 40.0% | |
| GATTCTACAACAGCACTTGT+AGG | + | chr7.4:18192500-18192519 | None:intergenic | 40.0% | |
| GCTTGACTATGCACTTCAAA+AGG | - | chr7.4:18191920-18191939 | MS.gene071752:CDS | 40.0% | |
| GCTTGATTATGCACTTAGAC+AGG | - | chr7.4:18193162-18193181 | MS.gene071752:CDS | 40.0% | |
| GGCATATCTTGAATAACCAC+AGG | + | chr7.4:18192698-18192717 | None:intergenic | 40.0% | |
| GTAGATATCTAGGCTCTCTT+GGG | + | chr7.4:18193060-18193079 | None:intergenic | 40.0% | |
| GTGATCTTACAAGACCATTC+AGG | + | chr7.4:18192370-18192389 | None:intergenic | 40.0% | |
| TAGGAGATTCATCAAGGCAT+TGG | - | chr7.4:18193015-18193034 | MS.gene071752:CDS | 40.0% | |
| TATAAGCAGTTGTCATGAGG+AGG | - | chr7.4:18192226-18192245 | MS.gene071752:CDS | 40.0% | |
| TTCCAAGACATCAACTGATG+TGG | - | chr7.4:18192604-18192623 | MS.gene071752:CDS | 40.0% | |
| TTTCCTTAACCGCCAAACAT+CGG | - | chr7.4:18191869-18191888 | MS.gene071752:CDS | 40.0% | |
| ! | GAAGCATCAAGTGATTGACT+TGG | + | chr7.4:18192077-18192096 | None:intergenic | 40.0% |
| ! | GCATCTGAAGTCAATTCTCT+TGG | + | chr7.4:18191828-18191847 | None:intergenic | 40.0% |
| ! | GGTTGTTTCCAAATTAACCC+CGG | - | chr7.4:18193183-18193202 | MS.gene071752:CDS | 40.0% |
| ! | GTCAATTCTCTTGGTCTTCT+TGG | + | chr7.4:18191819-18191838 | None:intergenic | 40.0% |
| ! | TCTTCTGAATCGGGTTCTAA+TGG | + | chr7.4:18193082-18193101 | None:intergenic | 40.0% |
| ! | TCTTGATGGCTTCAATCTGT+CGG | + | chr7.4:18192760-18192779 | None:intergenic | 40.0% |
| !! | AACTTTTTCCCCTTCGAAGT+TGG | + | chr7.4:18191850-18191869 | None:intergenic | 40.0% |
| AATAGGTTTGAAGGGGCTTC+TGG | + | chr7.4:18192413-18192432 | None:intergenic | 45.0% | |
| ACTTCAGATGCCAACTTCGA+AGG | - | chr7.4:18191837-18191856 | MS.gene071752:CDS | 45.0% | |
| ATCTGGAAATGGAATAGCCG+AGG | - | chr7.4:18192901-18192920 | MS.gene071752:CDS | 45.0% | |
| ATGACCACCAATGACATCCT+TGG | + | chr7.4:18192315-18192334 | None:intergenic | 45.0% | |
| CGATGAAGTTCCAGAAGATC+TGG | - | chr7.4:18192268-18192287 | MS.gene071752:CDS | 45.0% | |
| CTTCAGATGCCAACTTCGAA+GGG | - | chr7.4:18191838-18191857 | MS.gene071752:CDS | 45.0% | |
| GAAGAGAAAAGTGGAGCTGT+TGG | - | chr7.4:18193210-18193229 | MS.gene071752:CDS | 45.0% | |
| GGTAGATATCTAGGCTCTCT+TGG | + | chr7.4:18193061-18193080 | None:intergenic | 45.0% | |
| GTCACTCTTTGTCTTTGAGC+TGG | + | chr7.4:18191963-18191982 | None:intergenic | 45.0% | |
| GTTCACGGTGTTTAAGCACA+TGG | - | chr7.4:18192559-18192578 | MS.gene071752:CDS | 45.0% | |
| TCATCGACCATTCGTTTGGT+TGG | + | chr7.4:18192254-18192273 | None:intergenic | 45.0% | |
| TGCGTCTTCTACCATCTTGA+TGG | + | chr7.4:18192774-18192793 | None:intergenic | 45.0% | |
| TTCAGATGCCAACTTCGAAG+GGG | - | chr7.4:18191839-18191858 | MS.gene071752:CDS | 45.0% | |
| TTCTCTCTTCCGATGTTTGG+CGG | + | chr7.4:18191881-18191900 | None:intergenic | 45.0% | |
| TTCTGCAACAGTGGAATCTC+AGG | - | chr7.4:18192046-18192065 | MS.gene071752:CDS | 45.0% | |
| TTTCCAAATTAACCCCGGCT+AGG | - | chr7.4:18193188-18193207 | MS.gene071752:CDS | 45.0% | |
| ! | AAGGATGTCATTGGTGGTCA+TGG | - | chr7.4:18192314-18192333 | MS.gene071752:CDS | 45.0% |
| ! | ATTGTGCTGTTGTCAGGAAG+TGG | + | chr7.4:18192824-18192843 | None:intergenic | 45.0% |
| ! | CTGTCAATTGTGCTGTTGTC+AGG | + | chr7.4:18192830-18192849 | None:intergenic | 45.0% |
| ! | TGCCACATCAGTTGATGTCT+TGG | + | chr7.4:18192609-18192628 | None:intergenic | 45.0% |
| !! | TCCACTTTTCTCTTCCTAGC+CGG | + | chr7.4:18193205-18193224 | None:intergenic | 45.0% |
| ATCGCGATCTTCTGCAACAG+TGG | - | chr7.4:18192037-18192056 | MS.gene071752:CDS | 50.0% | |
| CTAGAGAAACAAGGCAGCAC+AGG | - | chr7.4:18192530-18192549 | MS.gene071752:CDS | 50.0% | |
| CTTCAAAGATCGTGCTGTGG+CGG | - | chr7.4:18192718-18192737 | MS.gene071752:CDS | 50.0% | |
| CTTCCGATGTTTGGCGGTTA+AGG | + | chr7.4:18191875-18191894 | None:intergenic | 50.0% | |
| CTTCCTAGCCGGGGTTAATT+TGG | + | chr7.4:18193194-18193213 | None:intergenic | 50.0% | |
| GAGAAAAGTGGAGCTGTTGG+TGG | - | chr7.4:18193213-18193232 | MS.gene071752:CDS | 50.0% | |
| GCCACAGCACGATCTTTGAA+GGG | + | chr7.4:18192719-18192738 | None:intergenic | 50.0% | |
| GGCTTGCAAAGTTCAGGCAT+TGG | + | chr7.4:18192188-18192207 | None:intergenic | 50.0% | |
| ! | CACTTTTCTCTTCCTAGCCG+GGG | + | chr7.4:18193203-18193222 | None:intergenic | 50.0% |
| ! | CTCTGGTGAAAGTACACCTG+TGG | - | chr7.4:18192679-18192698 | MS.gene071752:CDS | 50.0% |
| !! | CCACTTTTCTCTTCCTAGCC+GGG | + | chr7.4:18193204-18193223 | None:intergenic | 50.0% |
| AACAAGGCAGCACAGGACTG+TGG | - | chr7.4:18192537-18192556 | MS.gene071752:CDS | 55.0% | |
| CAGCACAGGACTGTGGTTCA+CGG | - | chr7.4:18192544-18192563 | MS.gene071752:CDS | 55.0% | |
| CCCGGCTAGGAAGAGAAAAG+TGG | - | chr7.4:18193201-18193220 | MS.gene071752:CDS | 55.0% | |
| CGCCACAGCACGATCTTTGA+AGG | + | chr7.4:18192720-18192739 | None:intergenic | 55.0% | |
| GAAGTGGCTGTGTGTCTGGA+AGG | + | chr7.4:18192808-18192827 | None:intergenic | 55.0% | |
| GCCCTTCAAAGATCGTGCTG+TGG | - | chr7.4:18192715-18192734 | MS.gene071752:CDS | 55.0% | |
| GGAGGCTCCAACCAAACGAA+TGG | - | chr7.4:18192244-18192263 | MS.gene071752:CDS | 55.0% | |
| TCAGGAAGTGGCTGTGTGTC+TGG | + | chr7.4:18192812-18192831 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 18191768 | 18193273 | 18191768 | ID=MS.gene071752 |
| chr7.4 | mRNA | 18191768 | 18193273 | 18191768 | ID=MS.gene071752.t1;Parent=MS.gene071752 |
| chr7.4 | exon | 18191768 | 18193273 | 18191768 | ID=MS.gene071752.t1.exon1;Parent=MS.gene071752.t1 |
| chr7.4 | CDS | 18191768 | 18193273 | 18191768 | ID=cds.MS.gene071752.t1;Parent=MS.gene071752.t1 |
| Gene Sequence |
| Protein sequence |
