Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049958.t1 | XP_024639340.1 | 92.7 | 465 | 22 | 2 | 1 | 465 | 1 | 453 | 3.20E-231 | 810.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049958.t1 | Q9S7V4 | 35.5 | 93 | 60 | 0 | 11 | 103 | 11 | 103 | 1.4e-12 | 75.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049958.t1 | A0A396HSG0 | 92.7 | 465 | 22 | 2 | 1 | 465 | 1 | 453 | 2.3e-231 | 810.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049958 | MS.gene050442 | 0.80166 | 8.11E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene050759 | 0.81575 | 7.88E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene050780 | 0.812451 | 4.21E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene050962 | 0.816967 | 4.21E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene051490 | 0.818119 | 2.31E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene053641 | 0.835349 | 1.77E-56 | -1.69E-46 |
| MS.gene049958 | MS.gene05414 | 0.823258 | 1.53E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene05423 | 0.813963 | 1.96E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene054291 | -0.8393 | 1.72E-57 | -1.69E-46 |
| MS.gene049958 | MS.gene054467 | 0.805774 | 1.13E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene054468 | 0.812498 | 4.11E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene055926 | 0.809068 | 2.27E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene056174 | 0.813106 | 3.03E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene057012 | 0.805932 | 1.05E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene058477 | 0.802603 | 5.19E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene060373 | 0.825094 | 5.65E-54 | -1.69E-46 |
| MS.gene049958 | MS.gene061539 | 0.841984 | 3.41E-58 | -1.69E-46 |
| MS.gene049958 | MS.gene063069 | 0.800284 | 1.55E-48 | -1.69E-46 |
| MS.gene049958 | MS.gene065752 | 0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene065768 | 0.820403 | 6.99E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene065770 | 0.822864 | 1.89E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene066335 | 0.819254 | 1.28E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene06698 | 0.803747 | 3.01E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene068889 | 0.807304 | 5.40E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene071551 | 0.81753 | 3.14E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene071752 | 0.816771 | 4.66E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene071753 | 0.833564 | 4.96E-56 | -1.69E-46 |
| MS.gene049958 | MS.gene072561 | 0.808854 | 2.52E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene07344 | 0.834469 | 2.94E-56 | -1.69E-46 |
| MS.gene049958 | MS.gene08184 | 0.800763 | 1.24E-48 | -1.69E-46 |
| MS.gene049958 | MS.gene20558 | 0.81551 | 8.91E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene20610 | 0.813032 | 3.14E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene22544 | 0.803756 | 3.00E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene27316 | 0.812525 | 4.06E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene27362 | 0.840508 | 8.34E-58 | -1.69E-46 |
| MS.gene049958 | MS.gene27492 | 0.813808 | 2.12E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene28461 | 0.813012 | 3.17E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene28904 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene30301 | 0.813495 | 2.49E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene31283 | 0.819533 | 1.11E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene31397 | 0.813155 | 2.95E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene32231 | 0.823732 | 1.18E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene33109 | 0.802759 | 4.82E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene33967 | 0.800861 | 1.18E-48 | -1.69E-46 |
| MS.gene049958 | MS.gene34667 | 0.800436 | 1.44E-48 | -1.69E-46 |
| MS.gene049958 | MS.gene34938 | 0.809562 | 1.78E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene35823 | 0.802227 | 6.20E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene35824 | 0.805837 | 1.10E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene35864 | 0.803747 | 3.01E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene36154 | 0.80302 | 4.25E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene37086 | 0.835391 | 1.72E-56 | -1.69E-46 |
| MS.gene049958 | MS.gene38269 | -0.817201 | 3.73E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene40121 | 0.81004 | 1.40E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene40123 | 0.822185 | 2.71E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene41165 | 0.80486 | 1.76E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene41380 | 0.80799 | 3.86E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene46139 | 0.808366 | 3.21E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene47603 | 0.804143 | 2.49E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene53861 | -0.812419 | 4.28E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene54110 | 0.823855 | 1.11E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene54703 | 0.82948 | 5.03E-55 | -1.69E-46 |
| MS.gene049958 | MS.gene55778 | 0.812161 | 4.87E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene56727 | 0.816387 | 5.68E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene58468 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene58547 | 0.818665 | 1.74E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene58802 | 0.824056 | 9.93E-54 | -1.69E-46 |
| MS.gene049958 | MS.gene59403 | 0.837998 | 3.73E-57 | -1.69E-46 |
| MS.gene049958 | MS.gene64645 | 0.800228 | 1.59E-48 | -1.69E-46 |
| MS.gene049958 | MS.gene64887 | 0.824093 | 9.73E-54 | -1.69E-46 |
| MS.gene049958 | MS.gene65858 | 0.805675 | 1.19E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene69007 | 0.807584 | 4.71E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene70712 | 0.801889 | 7.28E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene70895 | 0.804664 | 1.94E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene78251 | -0.802067 | 6.69E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene80853 | 0.820396 | 7.01E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene83192 | 0.815327 | 9.79E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene84454 | 0.802717 | 4.91E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene84731 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene049958 | MS.gene86333 | 0.804968 | 1.67E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene86335 | 0.805386 | 1.37E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene86336 | 0.804563 | 2.03E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene87692 | 0.811678 | 6.21E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene89277 | 0.802616 | 5.15E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene89350 | 0.816807 | 4.57E-52 | -1.69E-46 |
| MS.gene049958 | MS.gene92755 | 0.819753 | 9.84E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene95766 | -0.805948 | 1.04E-49 | -1.69E-46 |
| MS.gene049958 | MS.gene98848 | 0.812482 | 4.15E-51 | -1.69E-46 |
| MS.gene049958 | MS.gene99746 | 0.810814 | 9.56E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049958.t1 | MTR_4g093260 | 26.182 | 275 | 160 | 7 | 11 | 250 | 9 | 275 | 8.94e-20 | 92.8 |
| MS.gene049958.t1 | MTR_4g108350 | 32.323 | 99 | 67 | 0 | 10 | 108 | 13 | 111 | 1.15e-15 | 75.1 |
| MS.gene049958.t1 | MTR_3g452470 | 34.737 | 95 | 62 | 0 | 12 | 106 | 7 | 101 | 2.72e-14 | 70.9 |
| MS.gene049958.t1 | MTR_4g093280 | 23.755 | 261 | 166 | 7 | 19 | 249 | 17 | 274 | 4.07e-14 | 74.7 |
| MS.gene049958.t1 | MTR_5g039530 | 30.476 | 105 | 73 | 0 | 1 | 105 | 1 | 105 | 1.03e-12 | 67.0 |
| MS.gene049958.t1 | MTR_5g091800 | 36.471 | 85 | 54 | 0 | 22 | 106 | 17 | 101 | 5.35e-12 | 64.3 |
| MS.gene049958.t1 | MTR_8g096670 | 27.957 | 93 | 67 | 0 | 11 | 103 | 6 | 98 | 1.78e-11 | 61.2 |
| MS.gene049958.t1 | MTR_3g099010 | 29.787 | 94 | 66 | 0 | 12 | 105 | 7 | 100 | 3.44e-11 | 61.6 |
| MS.gene049958.t1 | MTR_8g096670 | 29.268 | 82 | 58 | 0 | 22 | 103 | 7 | 88 | 3.52e-11 | 60.1 |
| MS.gene049958.t1 | MTR_4g108350 | 32.051 | 78 | 53 | 0 | 31 | 108 | 25 | 102 | 9.55e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049958.t1 | AT1G74520 | 29.730 | 148 | 90 | 3 | 11 | 144 | 11 | 158 | 1.02e-16 | 78.2 |
| MS.gene049958.t1 | AT1G74520 | 29.730 | 148 | 90 | 3 | 11 | 144 | 11 | 158 | 1.02e-16 | 78.2 |
| MS.gene049958.t1 | AT1G69700 | 28.369 | 141 | 97 | 1 | 11 | 151 | 13 | 149 | 2.55e-16 | 77.4 |
| MS.gene049958.t1 | AT2G42820 | 31.683 | 101 | 69 | 0 | 10 | 110 | 5 | 105 | 2.32e-13 | 68.2 |
Find 80 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCATTCACACCATATTA+TGG | 0.214195 | 5.3:-52441344 | None:intergenic |
| GATTCAGAATATTTGCAATT+TGG | 0.215007 | 5.3:-52441309 | None:intergenic |
| AGAGGCCTTGTTCTCTCTTT+AGG | 0.218594 | 5.3:+52441532 | MS.gene049958:CDS |
| TTCACACAGGTTTCAGCTTT+TGG | 0.219860 | 5.3:-52441631 | None:intergenic |
| CTATTGTTAATACCTTATTT+TGG | 0.243172 | 5.3:+52440356 | MS.gene049958:CDS |
| CTTGTTCTCTCTTTAGGTCT+TGG | 0.247801 | 5.3:+52441538 | MS.gene049958:CDS |
| GTGGTCTGCTTCGTGATTAT+CGG | 0.253798 | 5.3:+52441434 | MS.gene049958:CDS |
| TGGTGGAACTTTGGGCTATA+TGG | 0.256656 | 5.3:+52441509 | MS.gene049958:CDS |
| TACTTTCTTGGTGGAACTTT+GGG | 0.281464 | 5.3:+52441501 | MS.gene049958:CDS |
| GTCTTGGGATAAAATCAATA+TGG | 0.303390 | 5.3:+52441554 | MS.gene049958:CDS |
| TTCGAGACAAATGCGCAAAT+TGG | 0.310319 | 5.3:-52441463 | None:intergenic |
| TTGTTCTCTCTTTAGGTCTT+GGG | 0.332936 | 5.3:+52441539 | MS.gene049958:CDS |
| AATAAAGAAACAGCTGGTTT+TGG | 0.354908 | 5.3:+52441412 | MS.gene049958:CDS |
| GTTGCAGATATGTTTCTATT+CGG | 0.367407 | 5.3:+52438627 | MS.gene049958:intron |
| TTAATTAAACGCTACTGTAC+TGG | 0.372209 | 5.3:+52440404 | MS.gene049958:CDS |
| AATTTGCAGTGTTATTTACT+TGG | 0.376792 | 5.3:+52438735 | MS.gene049958:CDS |
| TATTGCGCAGCACCAAAATA+AGG | 0.378729 | 5.3:-52440368 | None:intergenic |
| AAGCACAACTCCATTCCTTC+TGG | 0.379728 | 5.3:-52441114 | None:intergenic |
| CATATTATGGATCTAGAAAC+TGG | 0.383191 | 5.3:-52441331 | None:intergenic |
| CAAAATAAGGTATTAACAAT+AGG | 0.384113 | 5.3:-52440355 | None:intergenic |
| AATCACTCACCATCCTTTCC+TGG | 0.389151 | 5.3:+52438362 | MS.gene049958:CDS |
| ATACTTTCTTGGTGGAACTT+TGG | 0.389611 | 5.3:+52441500 | MS.gene049958:CDS |
| TCCCCAAGGAGATACTTTCT+TGG | 0.395766 | 5.3:+52441489 | MS.gene049958:CDS |
| AATGAGTTGTAATAATTGTC+TGG | 0.395962 | 5.3:-52440643 | None:intergenic |
| CAGTTTCTAGATCCATAATA+TGG | 0.399797 | 5.3:+52441332 | MS.gene049958:CDS |
| CACCAAGAAAGTATCTCCTT+GGG | 0.423053 | 5.3:-52441491 | None:intergenic |
| TGGTCTGCTTCGTGATTATC+GGG | 0.429907 | 5.3:+52441435 | MS.gene049958:CDS |
| GATCCATAATATGGTGTGAA+TGG | 0.430360 | 5.3:+52441341 | MS.gene049958:CDS |
| TAGCAAAAGTGTTGAAGAAT+CGG | 0.443544 | 5.3:+52440559 | MS.gene049958:CDS |
| TAGCAAAAGTGTTGAAGAAT+CGG | 0.443544 | 5.3:+52440589 | MS.gene049958:CDS |
| CACTTAGGGTCACATCTTCA+AGG | 0.453205 | 5.3:+52441166 | MS.gene049958:CDS |
| AGCAGATCATCTTGCAAAGA+TGG | 0.464394 | 5.3:+52441726 | MS.gene049958:CDS |
| AAAGGACAAAGCAAAGTAAT+CGG | 0.468833 | 5.3:-52438519 | None:intergenic |
| CATCAGGGGAGAGATGATCT+TGG | 0.473534 | 5.3:+52441040 | MS.gene049958:intron |
| TGGAAACATACTTTCTGAAT+CGG | 0.481170 | 5.3:+52440499 | MS.gene049958:CDS |
| CCACCAAGAAAGTATCTCCT+TGG | 0.481826 | 5.3:-52441492 | None:intergenic |
| AAAAGAAAGTCCAGAAGGAA+TGG | 0.482543 | 5.3:+52441104 | MS.gene049958:CDS |
| CATACTTTCTGAATCGGATA+CGG | 0.483563 | 5.3:+52440505 | MS.gene049958:CDS |
| CCAAGGAGATACTTTCTTGG+TGG | 0.484206 | 5.3:+52441492 | MS.gene049958:CDS |
| CTTGCAAAGATGGCTGTTTG+TGG | 0.484608 | 5.3:+52441736 | MS.gene049958:CDS |
| TTCGTTATTGCAGGCTCCCA+TGG | 0.484694 | 5.3:+52440303 | MS.gene049958:intron |
| TTTGATTCTTTGCTGCGTAA+AGG | 0.486434 | 5.3:-52441260 | None:intergenic |
| TGAGTAAGTTTGATGAGTCT+CGG | 0.487445 | 5.3:+52441671 | MS.gene049958:CDS |
| ACTGCAAGTGAAAATCACTT+AGG | 0.493129 | 5.3:+52441151 | MS.gene049958:CDS |
| CTGCAAGTGAAAATCACTTA+GGG | 0.508443 | 5.3:+52441152 | MS.gene049958:CDS |
| TCTGTAAATAAAGAAACAGC+TGG | 0.514986 | 5.3:+52441406 | MS.gene049958:CDS |
| TCTTGGGATAAAATCAATAT+GGG | 0.519546 | 5.3:+52441555 | MS.gene049958:CDS |
| TAATTAAACGCTACTGTACT+GGG | 0.522290 | 5.3:+52440405 | MS.gene049958:CDS |
| GATTGTCTTCACAACACTCA+TGG | 0.524206 | 5.3:-52441590 | None:intergenic |
| ATATGTTTCTATTCGGACGT+TGG | 0.539419 | 5.3:+52438634 | MS.gene049958:CDS |
| ATGAGTTGTAATAATTGTCT+GGG | 0.545208 | 5.3:-52440642 | None:intergenic |
| AAGTGTTAGTATACCAGGAA+AGG | 0.552633 | 5.3:-52438375 | None:intergenic |
| ATACTTTCTGAATCGGATAC+GGG | 0.559997 | 5.3:+52440506 | MS.gene049958:CDS |
| TTCTTTATTTACAGAACCGT+CGG | 0.577442 | 5.3:-52441398 | None:intergenic |
| TTTACGCAGCAAAGAATCAA+AGG | 0.578183 | 5.3:+52441262 | MS.gene049958:CDS |
| AGTCTCGGATTTCTCACTCA+TGG | 0.579409 | 5.3:+52441686 | MS.gene049958:CDS |
| GGCTGTTTGTGGAAATGATG+TGG | 0.583486 | 5.3:+52441747 | MS.gene049958:CDS |
| GTTAGTATACCAGGAAAGGA+TGG | 0.586370 | 5.3:-52438371 | None:intergenic |
| AGGGAAGAAACACAAGGCTA+AGG | 0.587634 | 5.3:+52441186 | MS.gene049958:CDS |
| TGCGTAAAGGATAGAACATA+CGG | 0.588069 | 5.3:-52441247 | None:intergenic |
| GAGGAACAAAATATCTAAGA+CGG | 0.590469 | 5.3:+52441827 | MS.gene049958:CDS |
| CTTTCACATGAGACCACCAT+GGG | 0.604216 | 5.3:-52440319 | None:intergenic |
| CAAGACCTAAAGAGAGAACA+AGG | 0.605269 | 5.3:-52441537 | None:intergenic |
| CGTCTTGAATGATATTGCAA+AGG | 0.607459 | 5.3:-52441798 | None:intergenic |
| ACTTAGGGTCACATCTTCAA+GGG | 0.607489 | 5.3:+52441167 | MS.gene049958:CDS |
| GGAACATGTGTGCATGGACG+AGG | 0.614286 | 5.3:+52440426 | MS.gene049958:CDS |
| GCAGCAAAGAATCAAAGGAA+TGG | 0.619825 | 5.3:+52441267 | MS.gene049958:CDS |
| GAACTTTGGGCTATATGGAG+AGG | 0.625001 | 5.3:+52441514 | MS.gene049958:CDS |
| GTACTGGGAACATGTGTGCA+TGG | 0.648375 | 5.3:+52440420 | MS.gene049958:CDS |
| GTTATTGCAGGCTCCCATGG+TGG | 0.653020 | 5.3:+52440306 | MS.gene049958:intron |
| TTTGTCTCGAAAGCTCCCCA+AGG | 0.662704 | 5.3:+52441475 | MS.gene049958:CDS |
| GGACAAAGCAAAGTAATCGG+AGG | 0.679495 | 5.3:-52438516 | None:intergenic |
| ACCAAGAAAGTATCTCCTTG+GGG | 0.682738 | 5.3:-52441490 | None:intergenic |
| ATCATTCAAGACGATGCCAG+AGG | 0.688719 | 5.3:+52441808 | MS.gene049958:CDS |
| GCTTTCACATGAGACCACCA+TGG | 0.697373 | 5.3:-52440320 | None:intergenic |
| TGGACAAAACTCAATACCGA+CGG | 0.699612 | 5.3:+52441382 | MS.gene049958:CDS |
| GATTGTGACAAGACAAACAG+CGG | 0.720919 | 5.3:+52441067 | MS.gene049958:CDS |
| GTGGTCTCATGTGAAAGCTG+TGG | 0.721440 | 5.3:+52440325 | MS.gene049958:CDS |
| TCTTCAAGGGAAGAAACACA+AGG | 0.746803 | 5.3:+52441180 | MS.gene049958:CDS |
| GGTCTGCTTCGTGATTATCG+GGG | 0.768767 | 5.3:+52441436 | MS.gene049958:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAAATTACTTACAA+AGG | - | chr5.3:52438540-52438559 | None:intergenic | 10.0% |
| !! | ATATAAAAAAGCAACATTAT+AGG | - | chr5.3:52438438-52438457 | None:intergenic | 15.0% |
| !! | TAAAATGATAAATGTGTATT+TGG | - | chr5.3:52440818-52440837 | None:intergenic | 15.0% |
| !!! | CTATTTTGTTAGTAATTTTA+TGG | + | chr5.3:52438858-52438877 | MS.gene049958:intron | 15.0% |
| !! | AAGCATTAAAATCATCATAT+GGG | - | chr5.3:52440747-52440766 | None:intergenic | 20.0% |
| !! | AATAAAGATAATTGTTGTGT+TGG | - | chr5.3:52439619-52439638 | None:intergenic | 20.0% |
| !! | TACTTGGTTGAATTTATTAA+TGG | + | chr5.3:52440060-52440079 | MS.gene049958:intron | 20.0% |
| !! | TCAACTATAACAATGAAATT+TGG | + | chr5.3:52439405-52439424 | MS.gene049958:intron | 20.0% |
| !!! | AAAAGAGTAAACAAACATTT+TGG | - | chr5.3:52439319-52439338 | None:intergenic | 20.0% |
| !!! | AAAGCATTAAAATCATCATA+TGG | - | chr5.3:52440748-52440767 | None:intergenic | 20.0% |
| !!! | AGAAGGAACAAAAATAATTT+TGG | + | chr5.3:52440139-52440158 | MS.gene049958:intron | 20.0% |
| !!! | ATTATTGAAATTCAAGTTTG+AGG | + | chr5.3:52439436-52439455 | MS.gene049958:intron | 20.0% |
| !!! | CAAAATAAGGTATTAACAAT+AGG | - | chr5.3:52440358-52440377 | None:intergenic | 20.0% |
| !!! | CTATTGTTAATACCTTATTT+TGG | + | chr5.3:52440356-52440375 | MS.gene049958:CDS | 20.0% |
| !!! | GAAGGAACAAAAATAATTTT+GGG | + | chr5.3:52440140-52440159 | MS.gene049958:intron | 20.0% |
| !!! | TTATTGAAATTCAAGTTTGA+GGG | + | chr5.3:52439437-52439456 | MS.gene049958:intron | 20.0% |
| ! | AATGAGTTGTAATAATTGTC+TGG | - | chr5.3:52440646-52440665 | None:intergenic | 25.0% |
| ! | ACAAATTTACATGGATGTTA+TGG | + | chr5.3:52440886-52440905 | MS.gene049958:intron | 25.0% |
| ! | ACTAAGAATAAGCAAAATAG+AGG | + | chr5.3:52439475-52439494 | MS.gene049958:intron | 25.0% |
| ! | ATACTAAATTATGCAATGTC+AGG | - | chr5.3:52439977-52439996 | None:intergenic | 25.0% |
| ! | ATCTTCTCTTTGTAATTTCA+TGG | - | chr5.3:52439225-52439244 | None:intergenic | 25.0% |
| ! | ATGAGTTGTAATAATTGTCT+GGG | - | chr5.3:52440645-52440664 | None:intergenic | 25.0% |
| ! | ATGGAAATAAAGTTAAGAGT+CGG | + | chr5.3:52440079-52440098 | MS.gene049958:intron | 25.0% |
| ! | ATTATGTTCCGATTATTAGT+AGG | + | chr5.3:52438808-52438827 | MS.gene049958:intron | 25.0% |
| ! | ATTCGTATCACAAATTTACA+TGG | + | chr5.3:52440877-52440896 | MS.gene049958:intron | 25.0% |
| ! | GATGTTAAAAAGTGATATCA+AGG | + | chr5.3:52439353-52439372 | MS.gene049958:intron | 25.0% |
| ! | GATTCAGAATATTTGCAATT+TGG | - | chr5.3:52441312-52441331 | None:intergenic | 25.0% |
| ! | TCTTGGGATAAAATCAATAT+GGG | + | chr5.3:52441555-52441574 | MS.gene049958:CDS | 25.0% |
| ! | TTATGTTCCGATTATTAGTA+GGG | + | chr5.3:52438809-52438828 | MS.gene049958:intron | 25.0% |
| !! | ACTTTTAGTATATCAGGTAT+TGG | + | chr5.3:52440679-52440698 | MS.gene049958:intron | 25.0% |
| !! | AGGTTTAGAGTACTTATAAT+GGG | - | chr5.3:52439010-52439029 | None:intergenic | 25.0% |
| !! | ATCTGAGTAAACAAACATTT+TGG | + | chr5.3:52439050-52439069 | MS.gene049958:intron | 25.0% |
| !! | GAAGAAACTTTTAGTATATC+AGG | + | chr5.3:52440673-52440692 | MS.gene049958:CDS | 25.0% |
| !! | GCAATAATGTCTTAAAGTTT+TGG | + | chr5.3:52439526-52439545 | MS.gene049958:intron | 25.0% |
| !! | TACTCTTTTAACATCGAATT+GGG | + | chr5.3:52439330-52439349 | MS.gene049958:intron | 25.0% |
| !! | TATTGAAATTCAAGTTTGAG+GGG | + | chr5.3:52439438-52439457 | MS.gene049958:intron | 25.0% |
| !! | TTACTCTTTTAACATCGAAT+TGG | + | chr5.3:52439329-52439348 | MS.gene049958:intron | 25.0% |
| !! | TTGTTTTCCCTACTAATAAT+CGG | - | chr5.3:52438819-52438838 | None:intergenic | 25.0% |
| !!! | AAAAATAATTTTGGGTCAAG+AGG | + | chr5.3:52440148-52440167 | MS.gene049958:intron | 25.0% |
| !!! | AATTTGCAGTGTTATTTACT+TGG | + | chr5.3:52438735-52438754 | MS.gene049958:CDS | 25.0% |
| !!! | AGTTTTAGTTATTAGCCTAT+TGG | + | chr5.3:52439583-52439602 | MS.gene049958:intron | 25.0% |
| !!! | CAAATGTATGTTTTGTTTGT+CGG | + | chr5.3:52439193-52439212 | MS.gene049958:intron | 25.0% |
| !!! | CAGAAAAGCATTTTTAGAAT+CGG | + | chr5.3:52440529-52440548 | MS.gene049958:CDS | 25.0% |
| !!! | CATTTTAAGTAGCCATAAAA+CGG | - | chr5.3:52439910-52439929 | None:intergenic | 25.0% |
| !!! | TAATGTCTTAAAGTTTTGGA+TGG | + | chr5.3:52439530-52439549 | MS.gene049958:intron | 25.0% |
| !!! | TTATAGTCTATTTCTGTACT+TGG | + | chr5.3:52440044-52440063 | MS.gene049958:intron | 25.0% |
| !!! | TTTTTATTTTTGTTGCATGC+AGG | + | chr5.3:52438493-52438512 | MS.gene049958:intron | 25.0% |
| AAACCTGTGTGAAAAAAATC+TGG | + | chr5.3:52441641-52441660 | MS.gene049958:CDS | 30.0% | |
| AAAGGACAAAGCAAAGTAAT+CGG | - | chr5.3:52438522-52438541 | None:intergenic | 30.0% | |
| AAGTAAAAAGAAAGTCCAGA+AGG | + | chr5.3:52441099-52441118 | MS.gene049958:CDS | 30.0% | |
| ACACGATGATTAGCATTAAT+TGG | - | chr5.3:52440933-52440952 | None:intergenic | 30.0% | |
| ACTAACAAAAGACACATTCT+TGG | - | chr5.3:52439161-52439180 | None:intergenic | 30.0% | |
| CAGATGCCAAAATTTAACAT+TGG | - | chr5.3:52439035-52439054 | None:intergenic | 30.0% | |
| CATATTATGGATCTAGAAAC+TGG | - | chr5.3:52441334-52441353 | None:intergenic | 30.0% | |
| CTAACAAAAGACACATTCTT+GGG | - | chr5.3:52439160-52439179 | None:intergenic | 30.0% | |
| GAGGAACAAAATATCTAAGA+CGG | + | chr5.3:52441827-52441846 | MS.gene049958:CDS | 30.0% | |
| GTCTAGAAAAACATTAAGGT+GGG | - | chr5.3:52439781-52439800 | None:intergenic | 30.0% | |
| GTCTTGGGATAAAATCAATA+TGG | + | chr5.3:52441554-52441573 | MS.gene049958:CDS | 30.0% | |
| TAAGAAAGTTGTTTGCATCA+GGG | + | chr5.3:52441025-52441044 | MS.gene049958:intron | 30.0% | |
| TAATTAAACGCTACTGTACT+GGG | + | chr5.3:52440405-52440424 | MS.gene049958:CDS | 30.0% | |
| TCTGTAAATAAAGAAACAGC+TGG | + | chr5.3:52441406-52441425 | MS.gene049958:CDS | 30.0% | |
| TGGAAACATACTTTCTGAAT+CGG | + | chr5.3:52440499-52440518 | MS.gene049958:CDS | 30.0% | |
| TGGTGTCTAGAAAAACATTA+AGG | - | chr5.3:52439785-52439804 | None:intergenic | 30.0% | |
| TGTCTAGAAAAACATTAAGG+TGG | - | chr5.3:52439782-52439801 | None:intergenic | 30.0% | |
| TTAATTAAACGCTACTGTAC+TGG | + | chr5.3:52440404-52440423 | MS.gene049958:CDS | 30.0% | |
| TTTATGGCTACTTAAAATGG+CGG | + | chr5.3:52439911-52439930 | MS.gene049958:intron | 30.0% | |
| TTTCCATTCACACCATATTA+TGG | - | chr5.3:52441347-52441366 | None:intergenic | 30.0% | |
| ! | AAATGTGTATTTGGAGTTGA+TGG | - | chr5.3:52440809-52440828 | None:intergenic | 30.0% |
| ! | ACCTCTCCAATGTTAAATTT+TGG | + | chr5.3:52439026-52439045 | MS.gene049958:intron | 30.0% |
| ! | ACTCTTTTAACATCGAATTG+GGG | + | chr5.3:52439331-52439350 | MS.gene049958:intron | 30.0% |
| ! | CAGTTTCTAGATCCATAATA+TGG | + | chr5.3:52441332-52441351 | MS.gene049958:CDS | 30.0% |
| ! | CATTTTGAATTCGTTATTGC+AGG | + | chr5.3:52440294-52440313 | MS.gene049958:intron | 30.0% |
| ! | CGTTTTATGGCTACTTAAAA+TGG | + | chr5.3:52439908-52439927 | MS.gene049958:intron | 30.0% |
| ! | GAGGTTTAGAGTACTTATAA+TGG | - | chr5.3:52439011-52439030 | None:intergenic | 30.0% |
| ! | GTCTCTTTTATCAGTCATTT+CGG | - | chr5.3:52438916-52438935 | None:intergenic | 30.0% |
| ! | GTTGCAGATATGTTTCTATT+CGG | + | chr5.3:52438627-52438646 | MS.gene049958:intron | 30.0% |
| ! | TCTTAGATATTTTGTTCCTC+TGG | - | chr5.3:52441827-52441846 | None:intergenic | 30.0% |
| ! | TGTGATTTTCAGATTGAAGA+TGG | - | chr5.3:52440459-52440478 | None:intergenic | 30.0% |
| ! | TTCTTTATTTACAGAACCGT+CGG | - | chr5.3:52441401-52441420 | None:intergenic | 30.0% |
| !! | AATAAAGAAACAGCTGGTTT+TGG | + | chr5.3:52441412-52441431 | MS.gene049958:CDS | 30.0% |
| !! | TAGCAAAAGTGTTGAAGAAT+CGG | + | chr5.3:52440559-52440578 | MS.gene049958:CDS | 30.0% |
| !!! | AAAGCATTTTTAGAATCGGA+TGG | + | chr5.3:52440533-52440552 | MS.gene049958:CDS | 30.0% |
| !!! | ATCAACGATGTCTTGTTTTT+TGG | + | chr5.3:52438678-52438697 | MS.gene049958:CDS | 30.0% |
| !!! | TCAACGATGTCTTGTTTTTT+GGG | + | chr5.3:52438679-52438698 | MS.gene049958:CDS | 30.0% |
| !!! | TTTCCAGATTTTTTTCACAC+AGG | - | chr5.3:52441647-52441666 | None:intergenic | 30.0% |
| AAAAGAAAGTCCAGAAGGAA+TGG | + | chr5.3:52441104-52441123 | MS.gene049958:CDS | 35.0% | |
| AAGAAAGTTGTTTGCATCAG+GGG | + | chr5.3:52441026-52441045 | MS.gene049958:intron | 35.0% | |
| AAGGAAAAAGAACTTCGAGT+TGG | + | chr5.3:52441205-52441224 | MS.gene049958:CDS | 35.0% | |
| AAGTGTTAGTATACCAGGAA+AGG | - | chr5.3:52438378-52438397 | None:intergenic | 35.0% | |
| ACAAAGAGAAGATACACTGA+GGG | + | chr5.3:52439232-52439251 | MS.gene049958:intron | 35.0% | |
| ACTGATAAAAGAGACACATG+TGG | + | chr5.3:52438921-52438940 | MS.gene049958:intron | 35.0% | |
| ACTGCAAGTGAAAATCACTT+AGG | + | chr5.3:52441151-52441170 | MS.gene049958:CDS | 35.0% | |
| AGAATATACACCACAAGACT+TGG | + | chr5.3:52440958-52440977 | MS.gene049958:intron | 35.0% | |
| AGCTAGGTTGTGAAAGAAAA+AGG | + | chr5.3:52440171-52440190 | MS.gene049958:intron | 35.0% | |
| ATAAAGTTAAGAGTCGGAGT+AGG | + | chr5.3:52440085-52440104 | MS.gene049958:intron | 35.0% | |
| ATACTTTCTGAATCGGATAC+GGG | + | chr5.3:52440506-52440525 | MS.gene049958:CDS | 35.0% | |
| ATACTTTCTTGGTGGAACTT+TGG | + | chr5.3:52441500-52441519 | MS.gene049958:CDS | 35.0% | |
| ATGCTCAAAAGCAATACCAA+AGG | - | chr5.3:52440023-52440042 | None:intergenic | 35.0% | |
| CATACTTTCTGAATCGGATA+CGG | + | chr5.3:52440505-52440524 | MS.gene049958:CDS | 35.0% | |
| CGTCTTGAATGATATTGCAA+AGG | - | chr5.3:52441801-52441820 | None:intergenic | 35.0% | |
| CTAAGAAAGTTGTTTGCATC+AGG | + | chr5.3:52441024-52441043 | MS.gene049958:intron | 35.0% | |
| CTGCAAGTGAAAATCACTTA+GGG | + | chr5.3:52441152-52441171 | MS.gene049958:CDS | 35.0% | |
| CTGTTAAATATTGGTCACCA+TGG | + | chr5.3:52439819-52439838 | MS.gene049958:intron | 35.0% | |
| GAAACTAGACACAAATCAGA+AGG | + | chr5.3:52440122-52440141 | MS.gene049958:intron | 35.0% | |
| GATCCATAATATGGTGTGAA+TGG | + | chr5.3:52441341-52441360 | MS.gene049958:CDS | 35.0% | |
| GCCAAAATTTAACATTGGAG+AGG | - | chr5.3:52439030-52439049 | None:intergenic | 35.0% | |
| TAATGGGAAAACCAACACTT+TGG | - | chr5.3:52438994-52439013 | None:intergenic | 35.0% | |
| TACAAAGAGAAGATACACTG+AGG | + | chr5.3:52439231-52439250 | MS.gene049958:intron | 35.0% | |
| TACTTTCTTGGTGGAACTTT+GGG | + | chr5.3:52441501-52441520 | MS.gene049958:CDS | 35.0% | |
| TAGCATCATTTCATTGACCA+AGG | - | chr5.3:52439706-52439725 | None:intergenic | 35.0% | |
| TATAGCATTCACATGCATGT+TGG | + | chr5.3:52439994-52440013 | MS.gene049958:intron | 35.0% | |
| TATGGTAATCACCACATACA+AGG | + | chr5.3:52440904-52440923 | MS.gene049958:intron | 35.0% | |
| TGACCAATATTTAACAGCAC+TGG | - | chr5.3:52439816-52439835 | None:intergenic | 35.0% | |
| TGAGTAAGTTTGATGAGTCT+CGG | + | chr5.3:52441671-52441690 | MS.gene049958:CDS | 35.0% | |
| TGCGTAAAGGATAGAACATA+CGG | - | chr5.3:52441250-52441269 | None:intergenic | 35.0% | |
| TTAAATATTGGTCACCATGG+TGG | + | chr5.3:52439822-52439841 | MS.gene049958:intron | 35.0% | |
| TTGTTCTCTCTTTAGGTCTT+GGG | + | chr5.3:52441539-52441558 | MS.gene049958:CDS | 35.0% | |
| TTTACGCAGCAAAGAATCAA+AGG | + | chr5.3:52441262-52441281 | MS.gene049958:CDS | 35.0% | |
| TTTGATTCTTTGCTGCGTAA+AGG | - | chr5.3:52441263-52441282 | None:intergenic | 35.0% | |
| ! | AGATAATTGTTGTGTTGGCA+AGG | - | chr5.3:52439614-52439633 | None:intergenic | 35.0% |
| ! | AGGAAAAAGAACTTCGAGTT+GGG | + | chr5.3:52441206-52441225 | MS.gene049958:CDS | 35.0% |
| ! | AGTAGGGAAAACAACCATTT+TGG | + | chr5.3:52438825-52438844 | MS.gene049958:intron | 35.0% |
| ! | ATATGTTTCTATTCGGACGT+TGG | + | chr5.3:52438634-52438653 | MS.gene049958:CDS | 35.0% |
| ! | GACATTTTCTCTCACATTTG+TGG | + | chr5.3:52439292-52439311 | MS.gene049958:intron | 35.0% |
| ! | GATAATTGTTGTGTTGGCAA+GGG | - | chr5.3:52439613-52439632 | None:intergenic | 35.0% |
| ! | TGACCAGTGCTGTTAAATAT+TGG | + | chr5.3:52439810-52439829 | MS.gene049958:intron | 35.0% |
| ! | TTAATTGGTCTCCTTGTATG+TGG | - | chr5.3:52440918-52440937 | None:intergenic | 35.0% |
| !! | GAAAGAAGTGTTAGTATACC+AGG | - | chr5.3:52438383-52438402 | None:intergenic | 35.0% |
| ACTTAGGGTCACATCTTCAA+GGG | + | chr5.3:52441167-52441186 | MS.gene049958:CDS | 40.0% | |
| ACTTTCAAGGACCAAAGTGT+TGG | + | chr5.3:52438980-52438999 | MS.gene049958:intron | 40.0% | |
| AGCAGATCATCTTGCAAAGA+TGG | + | chr5.3:52441726-52441745 | MS.gene049958:CDS | 40.0% | |
| AGCGAACGATGTATGATAGT+AGG | + | chr5.3:52440848-52440867 | MS.gene049958:intron | 40.0% | |
| AGGAGCAGTGTTATCCATTT+CGG | - | chr5.3:52439957-52439976 | None:intergenic | 40.0% | |
| AGGCTATGTGAAAAATCAGC+TGG | - | chr5.3:52441781-52441800 | None:intergenic | 40.0% | |
| ATGGTGTGAATGGAAAAAGC+CGG | + | chr5.3:52441351-52441370 | MS.gene049958:CDS | 40.0% | |
| CAAGACCTAAAGAGAGAACA+AGG | - | chr5.3:52441540-52441559 | None:intergenic | 40.0% | |
| CATCCTTCACAAATTGGCAA+TGG | - | chr5.3:52439876-52439895 | None:intergenic | 40.0% | |
| CATTGCCAATTTGTGAAGGA+TGG | + | chr5.3:52439874-52439893 | MS.gene049958:intron | 40.0% | |
| CTCAGAACAATCATCATCAC+TGG | + | chr5.3:52440222-52440241 | MS.gene049958:intron | 40.0% | |
| CTTGTTCTCTCTTTAGGTCT+TGG | + | chr5.3:52441538-52441557 | MS.gene049958:CDS | 40.0% | |
| GAATGGAAAAAGCCGGAATT+CGG | + | chr5.3:52441358-52441377 | MS.gene049958:CDS | 40.0% | |
| GACAACGAGTTACACTTTCA+AGG | + | chr5.3:52438967-52438986 | MS.gene049958:intron | 40.0% | |
| GATTGTCTTCACAACACTCA+TGG | - | chr5.3:52441593-52441612 | None:intergenic | 40.0% | |
| GATTGTGACAAGACAAACAG+CGG | + | chr5.3:52441067-52441086 | MS.gene049958:CDS | 40.0% | |
| GCAGCAAAGAATCAAAGGAA+TGG | + | chr5.3:52441267-52441286 | MS.gene049958:CDS | 40.0% | |
| GTAGCTTCTTCATTGCTTTG+AGG | + | chr5.3:52439670-52439689 | MS.gene049958:intron | 40.0% | |
| GTTAGTATACCAGGAAAGGA+TGG | - | chr5.3:52438374-52438393 | None:intergenic | 40.0% | |
| TAAGTAGCCATAAAACGGCA+TGG | - | chr5.3:52439905-52439924 | None:intergenic | 40.0% | |
| TATTGCGCAGCACCAAAATA+AGG | - | chr5.3:52440371-52440390 | None:intergenic | 40.0% | |
| TCTTCAAGGGAAGAAACACA+AGG | + | chr5.3:52441180-52441199 | MS.gene049958:CDS | 40.0% | |
| TGGACAAAACTCAATACCGA+CGG | + | chr5.3:52441382-52441401 | MS.gene049958:CDS | 40.0% | |
| TTACTTTCTGCCATCCGAAA+TGG | + | chr5.3:52439940-52439959 | MS.gene049958:intron | 40.0% | |
| TTCGAGACAAATGCGCAAAT+TGG | - | chr5.3:52441466-52441485 | None:intergenic | 40.0% | |
| ! | CACACATTTTGAATTGAGCG+AGG | + | chr5.3:52440475-52440494 | MS.gene049958:CDS | 40.0% |
| ! | CATTTTGAATTGAGCGAGGA+TGG | + | chr5.3:52440479-52440498 | MS.gene049958:CDS | 40.0% |
| ! | GTGATAACGAGACACATTCA+AGG | - | chr5.3:52439077-52439096 | None:intergenic | 40.0% |
| ! | TTCACACAGGTTTCAGCTTT+TGG | - | chr5.3:52441634-52441653 | None:intergenic | 40.0% |
| ! | TTTGAGGTTGACTACTACCT+TGG | + | chr5.3:52439686-52439705 | MS.gene049958:intron | 40.0% |
| !! | ACCAAGAAAGTATCTCCTTG+GGG | - | chr5.3:52441493-52441512 | None:intergenic | 40.0% |
| !! | AGTTTTGTCCATCCGAATTC+CGG | - | chr5.3:52441373-52441392 | None:intergenic | 40.0% |
| !! | CACCAAGAAAGTATCTCCTT+GGG | - | chr5.3:52441494-52441513 | None:intergenic | 40.0% |
| !! | GGGAAAACAACCATTTTGGT+CGG | + | chr5.3:52438829-52438848 | MS.gene049958:intron | 40.0% |
| !! | GTGGAAATGATGTGGTTTTG+TGG | + | chr5.3:52441755-52441774 | MS.gene049958:CDS | 40.0% |
| !!! | AAAGAAACAGCTGGTTTTGG+TGG | + | chr5.3:52441415-52441434 | MS.gene049958:CDS | 40.0% |
| !!! | GTATGTTTTGTTTGTCGGTC+TGG | + | chr5.3:52439198-52439217 | MS.gene049958:intron | 40.0% |
| AAGCACAACTCCATTCCTTC+TGG | - | chr5.3:52441117-52441136 | None:intergenic | 45.0% | |
| AATCACTCACCATCCTTTCC+TGG | + | chr5.3:52438362-52438381 | MS.gene049958:CDS | 45.0% | |
| AGGGAAGAAACACAAGGCTA+AGG | + | chr5.3:52441186-52441205 | MS.gene049958:CDS | 45.0% | |
| AGTCTCGGATTTCTCACTCA+TGG | + | chr5.3:52441686-52441705 | MS.gene049958:CDS | 45.0% | |
| ATCATTCAAGACGATGCCAG+AGG | + | chr5.3:52441808-52441827 | MS.gene049958:CDS | 45.0% | |
| CACTTAGGGTCACATCTTCA+AGG | + | chr5.3:52441166-52441185 | MS.gene049958:CDS | 45.0% | |
| CCAAGGAGATACTTTCTTGG+TGG | + | chr5.3:52441492-52441511 | MS.gene049958:CDS | 45.0% | |
| CCTTCACAAATTGGCAATGG+CGG | - | chr5.3:52439873-52439892 | None:intergenic | 45.0% | |
| CTTGCAAAGATGGCTGTTTG+TGG | + | chr5.3:52441736-52441755 | MS.gene049958:CDS | 45.0% | |
| CTTTCACATGAGACCACCAT+GGG | - | chr5.3:52440322-52440341 | None:intergenic | 45.0% | |
| GAACTTTGGGCTATATGGAG+AGG | + | chr5.3:52441514-52441533 | MS.gene049958:CDS | 45.0% | |
| GCAGTGTTATCCATTTCGGA+TGG | - | chr5.3:52439953-52439972 | None:intergenic | 45.0% | |
| GGACAAAGCAAAGTAATCGG+AGG | - | chr5.3:52438519-52438538 | None:intergenic | 45.0% | |
| GGCTGTTTGTGGAAATGATG+TGG | + | chr5.3:52441747-52441766 | MS.gene049958:CDS | 45.0% | |
| GTGGTCTGCTTCGTGATTAT+CGG | + | chr5.3:52441434-52441453 | MS.gene049958:CDS | 45.0% | |
| TCCCCAAGGAGATACTTTCT+TGG | + | chr5.3:52441489-52441508 | MS.gene049958:CDS | 45.0% | |
| TGCCAATTTGTGAAGGATGG+TGG | + | chr5.3:52439877-52439896 | MS.gene049958:intron | 45.0% | |
| TGGTCTGCTTCGTGATTATC+GGG | + | chr5.3:52441435-52441454 | MS.gene049958:CDS | 45.0% | |
| TGGTGGAACTTTGGGCTATA+TGG | + | chr5.3:52441509-52441528 | MS.gene049958:CDS | 45.0% | |
| !! | ACATGCATGTTGGCTTCCTT+TGG | + | chr5.3:52440004-52440023 | MS.gene049958:intron | 45.0% |
| !! | AGAGGCCTTGTTCTCTCTTT+AGG | + | chr5.3:52441532-52441551 | MS.gene049958:CDS | 45.0% |
| !! | ATTTTGGGTCAAGAGGAGCT+AGG | + | chr5.3:52440155-52440174 | MS.gene049958:intron | 45.0% |
| !! | CCACCAAGAAAGTATCTCCT+TGG | - | chr5.3:52441495-52441514 | None:intergenic | 45.0% |
| !! | TAACAGCACTGGTCAAGACT+TGG | - | chr5.3:52439805-52439824 | None:intergenic | 45.0% |
| AGTGTCGTGTTGTGGTCTCT+TGG | + | chr5.3:52439559-52439578 | MS.gene049958:intron | 50.0% | |
| CATCAGGGGAGAGATGATCT+TGG | + | chr5.3:52441040-52441059 | MS.gene049958:intron | 50.0% | |
| CCGCCATTGCCAATTTGTGA+AGG | + | chr5.3:52439870-52439889 | MS.gene049958:intron | 50.0% | |
| CGCCACCATCCTTCACAAAT+TGG | - | chr5.3:52439882-52439901 | None:intergenic | 50.0% | |
| GCATCTCTCACCAAGTCTTG+TGG | - | chr5.3:52440971-52440990 | None:intergenic | 50.0% | |
| GCTTTCACATGAGACCACCA+TGG | - | chr5.3:52440323-52440342 | None:intergenic | 50.0% | |
| GGAAAAAGCCGGAATTCGGA+TGG | + | chr5.3:52441362-52441381 | MS.gene049958:CDS | 50.0% | |
| GGAGATGTAGTGTCGTGTTG+TGG | + | chr5.3:52439551-52439570 | MS.gene049958:intron | 50.0% | |
| GGTCTGCTTCGTGATTATCG+GGG | + | chr5.3:52441436-52441455 | MS.gene049958:CDS | 50.0% | |
| GTACTGGGAACATGTGTGCA+TGG | + | chr5.3:52440420-52440439 | MS.gene049958:CDS | 50.0% | |
| GTGGTCTCATGTGAAAGCTG+TGG | + | chr5.3:52440325-52440344 | MS.gene049958:CDS | 50.0% | |
| TTCGTTATTGCAGGCTCCCA+TGG | + | chr5.3:52440303-52440322 | MS.gene049958:intron | 50.0% | |
| TTTGTCTCGAAAGCTCCCCA+AGG | + | chr5.3:52441475-52441494 | MS.gene049958:CDS | 50.0% | |
| !! | ATAGACAGCGCCGACCAAAA+TGG | - | chr5.3:52438842-52438861 | None:intergenic | 50.0% |
| !! | TTGGTCACCATGGTGGATTG+CGG | + | chr5.3:52439829-52439848 | MS.gene049958:intron | 50.0% |
| GGAACATGTGTGCATGGACG+AGG | + | chr5.3:52440426-52440445 | MS.gene049958:CDS | 55.0% | |
| GTTATTGCAGGCTCCCATGG+TGG | + | chr5.3:52440306-52440325 | MS.gene049958:intron | 55.0% | |
| ACTGCCACCGCAATCCACCA+TGG | - | chr5.3:52439839-52439858 | None:intergenic | 60.0% | |
| ! | GTTGGCAAGGGCGCACCAAT+AGG | - | chr5.3:52439601-52439620 | None:intergenic | 60.0% |
| !! | GTCACCATGGTGGATTGCGG+TGG | + | chr5.3:52439832-52439851 | MS.gene049958:intron | 60.0% |
| !!! | GGTGGCGCCATGCCGTTTTA+TGG | + | chr5.3:52439895-52439914 | MS.gene049958:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 52438322 | 52441852 | 52438322 | ID=MS.gene049958 |
| chr5.3 | mRNA | 52438322 | 52441852 | 52438322 | ID=MS.gene049958.t1;Parent=MS.gene049958 |
| chr5.3 | exon | 52438322 | 52438383 | 52438322 | ID=MS.gene049958.t1.exon1;Parent=MS.gene049958.t1 |
| chr5.3 | CDS | 52438322 | 52438383 | 52438322 | ID=cds.MS.gene049958.t1;Parent=MS.gene049958.t1 |
| chr5.3 | exon | 52438515 | 52438541 | 52438515 | ID=MS.gene049958.t1.exon2;Parent=MS.gene049958.t1 |
| chr5.3 | CDS | 52438515 | 52438541 | 52438515 | ID=cds.MS.gene049958.t1;Parent=MS.gene049958.t1 |
| chr5.3 | exon | 52438634 | 52438756 | 52438634 | ID=MS.gene049958.t1.exon3;Parent=MS.gene049958.t1 |
| chr5.3 | CDS | 52438634 | 52438756 | 52438634 | ID=cds.MS.gene049958.t1;Parent=MS.gene049958.t1 |
| chr5.3 | exon | 52440316 | 52440694 | 52440316 | ID=MS.gene049958.t1.exon4;Parent=MS.gene049958.t1 |
| chr5.3 | CDS | 52440316 | 52440694 | 52440316 | ID=cds.MS.gene049958.t1;Parent=MS.gene049958.t1 |
| chr5.3 | exon | 52441046 | 52441852 | 52441046 | ID=MS.gene049958.t1.exon5;Parent=MS.gene049958.t1 |
| chr5.3 | CDS | 52441046 | 52441852 | 52441046 | ID=cds.MS.gene049958.t1;Parent=MS.gene049958.t1 |
| Gene Sequence |
| Protein sequence |
