Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071823.t1 | XP_013444844.1 | 96.2 | 79 | 3 | 0 | 1 | 79 | 1 | 79 | 1.50E-32 | 148.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071823.t1 | A0A072TN25 | 96.2 | 79 | 3 | 0 | 1 | 79 | 1 | 79 | 1.1e-32 | 148.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055469 | MS.gene071823 | -0.807471 | 4.97E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071823.t1 | MTR_8g031010 | 96.203 | 79 | 3 | 0 | 1 | 79 | 1 | 79 | 3.71e-51 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071823.t1 | AT4G00530 | 60.274 | 73 | 27 | 1 | 4 | 76 | 1 | 71 | 1.89e-26 | 92.4 |
| MS.gene071823.t1 | AT1G01725 | 63.793 | 58 | 21 | 0 | 4 | 61 | 1 | 58 | 1.78e-18 | 72.0 |
Find 13 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTCAAGAGCATTGGGTTT+GGG | 0.207891 | 8.3:+64354024 | None:intergenic |
| TTTCTCTTAACCGCTGATTA+TGG | 0.351208 | 8.3:-64354048 | MS.gene071823:CDS |
| AGGGTCAAGAGCATTGGGTT+TGG | 0.363373 | 8.3:+64354023 | None:intergenic |
| AGAAAAGCGTATAGAGAAAT+CGG | 0.434485 | 8.3:-64351993 | MS.gene071823:CDS |
| CTTACAGGGTCAAGAGCATT+GGG | 0.437031 | 8.3:+64354018 | None:intergenic |
| ATCAGCGGTTAAGAGAAAAT+AGG | 0.439089 | 8.3:+64354053 | None:intergenic |
| ACTTACAGGGTCAAGAGCAT+TGG | 0.476007 | 8.3:+64354017 | None:intergenic |
| AAACCGACAAGTTTGTGAAA+AGG | 0.497180 | 8.3:-64354104 | MS.gene071823:CDS |
| GGTCAAGAGCATTGGGTTTG+GGG | 0.502771 | 8.3:+64354025 | None:intergenic |
| AGCGGTAATAGTTGCAACAA+TGG | 0.608154 | 8.3:+64354077 | None:intergenic |
| GGGTTTGGGGCCATAATCAG+CGG | 0.621458 | 8.3:+64354038 | None:intergenic |
| GGTTAAGAGAAAATAGGAAG+CGG | 0.645152 | 8.3:+64354059 | None:intergenic |
| AGAGAAATCGGACAGCAACA+AGG | 0.654363 | 8.3:-64351981 | MS.gene071823:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACCTCAAAAAAAACATT+TGG | + | chr8.3:64353131-64353150 | None:intergenic | 20.0% |
| !! | AAAAGACAAACTATTGAAAA+TGG | + | chr8.3:64353173-64353192 | None:intergenic | 20.0% |
| !! | TAAAAACATAGCTATTGTTA+AGG | + | chr8.3:64353017-64353036 | None:intergenic | 20.0% |
| !! | TAAAAACATGATCAATAGTA+GGG | + | chr8.3:64352268-64352287 | None:intergenic | 20.0% |
| !! | TAATATTCATAGAGATTTGT+GGG | - | chr8.3:64352291-64352310 | MS.gene071823:intron | 20.0% |
| !! | TAGTTTGAACTTTGAATTTA+GGG | - | chr8.3:64352126-64352145 | MS.gene071823:intron | 20.0% |
| !! | TGAAAGTTAAATCTAGAAAA+TGG | - | chr8.3:64353202-64353221 | MS.gene071823:intron | 20.0% |
| !! | TTAAGGAAAATAACATATGT+TGG | + | chr8.3:64352225-64352244 | None:intergenic | 20.0% |
| !! | TTAATATTCATAGAGATTTG+TGG | - | chr8.3:64352290-64352309 | MS.gene071823:intron | 20.0% |
| !!! | AAAATTTAGCTTAATGGTTT+AGG | - | chr8.3:64353474-64353493 | MS.gene071823:intron | 20.0% |
| !!! | AAACCATTAAGCTAAATTTT+GGG | + | chr8.3:64353474-64353493 | None:intergenic | 20.0% |
| !!! | ACTGTGAAAGAATTTTTTTT+GGG | - | chr8.3:64354059-64354078 | MS.gene071823:CDS | 20.0% |
| !!! | TAAACCATTAAGCTAAATTT+TGG | + | chr8.3:64353475-64353494 | None:intergenic | 20.0% |
| !!! | TATAAGAAATTGAAAGCTTT+TGG | - | chr8.3:64352829-64352848 | MS.gene071823:intron | 20.0% |
| !!! | TATTTCCAAATTTTGATCAA+GGG | - | chr8.3:64352194-64352213 | MS.gene071823:intron | 20.0% |
| !!! | TTAGTTTGAACTTTGAATTT+AGG | - | chr8.3:64352125-64352144 | MS.gene071823:intron | 20.0% |
| ! | AATTCCAAAAGTTAACTCAA+AGG | + | chr8.3:64353864-64353883 | None:intergenic | 25.0% |
| ! | ACCTATGATTGATATGTTAT+TGG | - | chr8.3:64353718-64353737 | MS.gene071823:intron | 25.0% |
| ! | AGACTATCAAATTTCTATTG+TGG | - | chr8.3:64353688-64353707 | MS.gene071823:intron | 25.0% |
| ! | AGGATACTAATTTACTCAAA+CGG | - | chr8.3:64353384-64353403 | MS.gene071823:intron | 25.0% |
| ! | AGGATTATTCAAACTTTACA+AGG | + | chr8.3:64353838-64353857 | None:intergenic | 25.0% |
| ! | ATTCCAAAAGTTAACTCAAA+GGG | + | chr8.3:64353863-64353882 | None:intergenic | 25.0% |
| ! | CCTATGATTGATATGTTATT+GGG | - | chr8.3:64353719-64353738 | MS.gene071823:intron | 25.0% |
| ! | CTAAAAACATGATCAATAGT+AGG | + | chr8.3:64352269-64352288 | None:intergenic | 25.0% |
| ! | TATATCCTTTACCATTAGAA+AGG | - | chr8.3:64353336-64353355 | MS.gene071823:intron | 25.0% |
| ! | TCAATATCTTCAATTGTTGT+GGG | + | chr8.3:64353806-64353825 | None:intergenic | 25.0% |
| !! | AAAAAAAACATTTGGTTCGT+CGG | + | chr8.3:64353123-64353142 | None:intergenic | 25.0% |
| !! | AACCATTAAGCTAAATTTTG+GGG | + | chr8.3:64353473-64353492 | None:intergenic | 25.0% |
| !! | CCAAAATAAGAATGTTTTGT+AGG | - | chr8.3:64352769-64352788 | MS.gene071823:intron | 25.0% |
| !! | GGAAAAACTAAAGATCTTTT+GGG | - | chr8.3:64352850-64352869 | MS.gene071823:intron | 25.0% |
| !! | TGGAAAAACTAAAGATCTTT+TGG | - | chr8.3:64352849-64352868 | MS.gene071823:intron | 25.0% |
| !! | TTCAATGTAACTTTAGAAGA+TGG | + | chr8.3:64353411-64353430 | None:intergenic | 25.0% |
| !! | TTCTTTTCTTTTATGCCATT+TGG | - | chr8.3:64353057-64353076 | MS.gene071823:intron | 25.0% |
| !!! | CACTGTGAAAGAATTTTTTT+TGG | - | chr8.3:64354058-64354077 | MS.gene071823:CDS | 25.0% |
| !!! | CCTACAAAACATTCTTATTT+TGG | + | chr8.3:64352772-64352791 | None:intergenic | 25.0% |
| !!! | CTATTTCCAAATTTTGATCA+AGG | - | chr8.3:64352193-64352212 | MS.gene071823:intron | 25.0% |
| !!! | TTGTTTTTTCTTAGATCTGA+TGG | - | chr8.3:64353987-64354006 | MS.gene071823:intron | 25.0% |
| AACGTTTAAGAATTGACATC+TGG | + | chr8.3:64353766-64353785 | None:intergenic | 30.0% | |
| AATTGCCCTTGATCAAAATT+TGG | + | chr8.3:64352202-64352221 | None:intergenic | 30.0% | |
| ATCAAGTCAGGTATAACATA+TGG | - | chr8.3:64353265-64353284 | MS.gene071823:intron | 30.0% | |
| ATTGGGTTAAACAAATCTGT+CGG | + | chr8.3:64352592-64352611 | None:intergenic | 30.0% | |
| CCCAATAACATATCAATCAT+AGG | + | chr8.3:64353722-64353741 | None:intergenic | 30.0% | |
| CCTATCCTAGATATGTTATT+GGG | + | chr8.3:64353603-64353622 | None:intergenic | 30.0% | |
| GTCAATATCTTCAATTGTTG+TGG | + | chr8.3:64353807-64353826 | None:intergenic | 30.0% | |
| GTCAATTCTTAAACGTTATG+TGG | - | chr8.3:64353769-64353788 | MS.gene071823:intron | 30.0% | |
| TAAGAAAAAACAATTCCCAC+AGG | + | chr8.3:64353980-64353999 | None:intergenic | 30.0% | |
| TAGAACCTTTCTAATGGTAA+AGG | + | chr8.3:64353344-64353363 | None:intergenic | 30.0% | |
| TATGCTATGGCTTAGAATAA+TGG | - | chr8.3:64352389-64352408 | MS.gene071823:intron | 30.0% | |
| TGATGAACTACTTAGAATTC+AGG | - | chr8.3:64353432-64353451 | MS.gene071823:intron | 30.0% | |
| TTTAGATCCAACATCAACTA+GGG | + | chr8.3:64353531-64353550 | None:intergenic | 30.0% | |
| ! | AACCCCAAAATTTAGCTTAA+TGG | - | chr8.3:64353468-64353487 | MS.gene071823:intron | 30.0% |
| ! | AGAAAAGCGTATAGAGAAAT+CGG | - | chr8.3:64354100-64354119 | MS.gene071823:CDS | 30.0% |
| ! | TAACCTTTTCACAAACTTGT+CGG | + | chr8.3:64351995-64352014 | None:intergenic | 30.0% |
| ! | TAAGAATGTTTTGTAGGACT+TGG | - | chr8.3:64352775-64352794 | MS.gene071823:intron | 30.0% |
| ! | TCCTAGAGTATCTTAGTATT+CGG | + | chr8.3:64353901-64353920 | None:intergenic | 30.0% |
| !! | AGATCTTTTGGGAAAAGAAA+AGG | - | chr8.3:64352861-64352880 | MS.gene071823:intron | 30.0% |
| !! | CTTAACATATGCTTTTAGCT+GGG | - | chr8.3:64352240-64352259 | MS.gene071823:intron | 30.0% |
| !! | GAAGTTGTTTCTTAAAGTGA+GGG | + | chr8.3:64352525-64352544 | None:intergenic | 30.0% |
| !! | TTAACATATGCTTTTAGCTG+GGG | - | chr8.3:64352241-64352260 | MS.gene071823:intron | 30.0% |
| !!! | ACCTCTTAAACTAGTTTTTG+GGG | + | chr8.3:64353666-64353685 | None:intergenic | 30.0% |
| !!! | AGGTTTTAGAACCTTTCTAA+TGG | + | chr8.3:64353350-64353369 | None:intergenic | 30.0% |
| !!! | CACCTCTTAAACTAGTTTTT+GGG | + | chr8.3:64353667-64353686 | None:intergenic | 30.0% |
| !!! | CGAACCAAATGTTTTTTTTG+AGG | - | chr8.3:64353124-64353143 | MS.gene071823:intron | 30.0% |
| !!! | TCACCTCTTAAACTAGTTTT+TGG | + | chr8.3:64353668-64353687 | None:intergenic | 30.0% |
| AAACCGACAAGTTTGTGAAA+AGG | - | chr8.3:64351989-64352008 | MS.gene071823:CDS | 35.0% | |
| AAACCTCTTTGTTGGTATTC+AGG | - | chr8.3:64353364-64353383 | MS.gene071823:intron | 35.0% | |
| AAAGTAGTCCTTACAAGGTT+TGG | + | chr8.3:64353505-64353524 | None:intergenic | 35.0% | |
| AAGAGGAAAAACACGTAAAC+CGG | + | chr8.3:64352691-64352710 | None:intergenic | 35.0% | |
| AGAAATTCGACTAACCTAAG+AGG | + | chr8.3:64352708-64352727 | None:intergenic | 35.0% | |
| ATCAGCGGTTAAGAGAAAAT+AGG | + | chr8.3:64352043-64352062 | None:intergenic | 35.0% | |
| ATCATCTAACAGAAACCTGT+GGG | - | chr8.3:64353962-64353981 | MS.gene071823:intron | 35.0% | |
| ATTCATGTCATGTATCGTAG+AGG | - | chr8.3:64352968-64352987 | MS.gene071823:intron | 35.0% | |
| CAGCATGATTAATGTGCTTA+TGG | + | chr8.3:64352802-64352821 | None:intergenic | 35.0% | |
| GCCTATCCTAGATATGTTAT+TGG | + | chr8.3:64353604-64353623 | None:intergenic | 35.0% | |
| GGGTTATAATTCAATCCAAC+TGG | + | chr8.3:64353291-64353310 | None:intergenic | 35.0% | |
| GGTTAAGAGAAAATAGGAAG+CGG | + | chr8.3:64352037-64352056 | None:intergenic | 35.0% | |
| GTCCATGTTCCAAATGTTTA+AGG | + | chr8.3:64353568-64353587 | None:intergenic | 35.0% | |
| GTTTAGATCCAACATCAACT+AGG | + | chr8.3:64353532-64353551 | None:intergenic | 35.0% | |
| TATCATCTAACAGAAACCTG+TGG | - | chr8.3:64353961-64353980 | MS.gene071823:intron | 35.0% | |
| TATCCTGAATACCAACAAAG+AGG | + | chr8.3:64353370-64353389 | None:intergenic | 35.0% | |
| TCACAAACCATCTTCGAATT+GGG | - | chr8.3:64353624-64353643 | MS.gene071823:intron | 35.0% | |
| TCTAGAAAATGGACCATAGT+AGG | - | chr8.3:64353213-64353232 | MS.gene071823:intron | 35.0% | |
| TGGGAAAAGAAAAGGACTTT+GGG | - | chr8.3:64352869-64352888 | MS.gene071823:intron | 35.0% | |
| TGTCAATATTTGCAATGCCT+CGG | + | chr8.3:64353312-64353331 | None:intergenic | 35.0% | |
| TTGGATTGAATTATAACCCG+AGG | - | chr8.3:64353292-64353311 | MS.gene071823:intron | 35.0% | |
| TTGGGAAAAGAAAAGGACTT+TGG | - | chr8.3:64352868-64352887 | MS.gene071823:intron | 35.0% | |
| TTTGTCTGGAAAATCAAGTC+AGG | - | chr8.3:64353253-64353272 | MS.gene071823:intron | 35.0% | |
| ! | AGGATTTTCCAAACCTTGTA+AGG | - | chr8.3:64353494-64353513 | MS.gene071823:intron | 35.0% |
| ! | CCAGCTAAAAGCATATGTTA+AGG | + | chr8.3:64352242-64352261 | None:intergenic | 35.0% |
| ! | CCCAATAACATATCTAGGAT+AGG | - | chr8.3:64353600-64353619 | MS.gene071823:intron | 35.0% |
| ! | CCTAGAGTATCTTAGTATTC+GGG | + | chr8.3:64353900-64353919 | None:intergenic | 35.0% |
| ! | CCTTAACATATGCTTTTAGC+TGG | - | chr8.3:64352239-64352258 | MS.gene071823:intron | 35.0% |
| ! | GCAACACTACATGTCTTATT+GGG | - | chr8.3:64352545-64352564 | MS.gene071823:intron | 35.0% |
| ! | GTGGTGATCTCATGATTTTA+GGG | - | chr8.3:64352365-64352384 | MS.gene071823:intron | 35.0% |
| ! | GTTTACGTGTTTTTCCTCTT+AGG | - | chr8.3:64352691-64352710 | MS.gene071823:intron | 35.0% |
| ! | TCCCCAAAAACTAGTTTAAG+AGG | - | chr8.3:64353662-64353681 | MS.gene071823:intron | 35.0% |
| ! | TGGAACAAGTGATAGTGTTA+AGG | - | chr8.3:64352466-64352485 | MS.gene071823:intron | 35.0% |
| ! | TGGCTTAGAATAATGGAAGA+TGG | - | chr8.3:64352396-64352415 | MS.gene071823:intron | 35.0% |
| ! | TGTGGTGATCTCATGATTTT+AGG | - | chr8.3:64352364-64352383 | MS.gene071823:intron | 35.0% |
| ! | TTGTTTCTTAAAGTGAGGGA+TGG | + | chr8.3:64352521-64352540 | None:intergenic | 35.0% |
| ! | TTTCTCTTAACCGCTGATTA+TGG | - | chr8.3:64352045-64352064 | MS.gene071823:CDS | 35.0% |
| !! | AGGTTCTAAAACCTCTTTGT+TGG | - | chr8.3:64353356-64353375 | MS.gene071823:intron | 35.0% |
| !! | AGTCGAATTTCTAGCAAGTT+CGG | - | chr8.3:64352716-64352735 | MS.gene071823:intron | 35.0% |
| !! | CGAAGTTGTTTCTTAAAGTG+AGG | + | chr8.3:64352526-64352545 | None:intergenic | 35.0% |
| !!! | ATGATTTTAGGGCTATGCTA+TGG | - | chr8.3:64352376-64352395 | MS.gene071823:intron | 35.0% |
| !!! | ATTTTGGAATGCAACTTGCT+AGG | + | chr8.3:64352756-64352775 | None:intergenic | 35.0% |
| !!! | CTAAATTTTGGGGTTGAGTT+AGG | + | chr8.3:64353463-64353482 | None:intergenic | 35.0% |
| !!! | TTCACAAACTTGTCGGTTTT+TGG | + | chr8.3:64351988-64352007 | None:intergenic | 35.0% |
| !!! | TTTTGGAATGCAACTTGCTA+GGG | + | chr8.3:64352755-64352774 | None:intergenic | 35.0% |
| AAAAGTTAACTCAAAGGGCG+AGG | + | chr8.3:64353858-64353877 | None:intergenic | 40.0% | |
| AAGAGAGAGAGAGACTTACA+GGG | + | chr8.3:64352092-64352111 | None:intergenic | 40.0% | |
| AGATCACCACAAATCTGACA+CGG | + | chr8.3:64352355-64352374 | None:intergenic | 40.0% | |
| AGCGGTAATAGTTGCAACAA+TGG | + | chr8.3:64352019-64352038 | None:intergenic | 40.0% | |
| AGGTATAACATATGGCCAGT+TGG | - | chr8.3:64353273-64353292 | MS.gene071823:intron | 40.0% | |
| ATGAGATGGATAGCAGCTAA+AGG | - | chr8.3:64352932-64352951 | MS.gene071823:intron | 40.0% | |
| ATGGCATGCTATGTGAAGTA+TGG | - | chr8.3:64352897-64352916 | MS.gene071823:intron | 40.0% | |
| CCCGAATACTAAGATACTCT+AGG | - | chr8.3:64353897-64353916 | MS.gene071823:intron | 40.0% | |
| CGCAACACTACATGTCTTAT+TGG | - | chr8.3:64352544-64352563 | MS.gene071823:intron | 40.0% | |
| CTCACAAACCATCTTCGAAT+TGG | - | chr8.3:64353623-64353642 | MS.gene071823:intron | 40.0% | |
| GACTTAACCCAATTCGAAGA+TGG | + | chr8.3:64353634-64353653 | None:intergenic | 40.0% | |
| GGATCAAAGTAGTCCTTACA+AGG | + | chr8.3:64353510-64353529 | None:intergenic | 40.0% | |
| GGGAATTGTGTTTGATGAGA+TGG | - | chr8.3:64352918-64352937 | MS.gene071823:intron | 40.0% | |
| GTCAATATTTGCAATGCCTC+GGG | + | chr8.3:64353311-64353330 | None:intergenic | 40.0% | |
| TGGCATGCTATGTGAAGTAT+GGG | - | chr8.3:64352898-64352917 | MS.gene071823:intron | 40.0% | |
| TTCTTAAAGTGAGGGATGGT+GGG | + | chr8.3:64352517-64352536 | None:intergenic | 40.0% | |
| TTTCTTAAAGTGAGGGATGG+TGG | + | chr8.3:64352518-64352537 | None:intergenic | 40.0% | |
| ! | AAGAATTGACATCTGGAGTG+TGG | + | chr8.3:64353759-64353778 | None:intergenic | 40.0% |
| ! | AATGGAAGATGGTGATGAAG+AGG | - | chr8.3:64352407-64352426 | MS.gene071823:intron | 40.0% |
| ! | CACTACATGTCTTATTGGGT+CGG | - | chr8.3:64352549-64352568 | MS.gene071823:intron | 40.0% |
| ! | CCAAATGTTTAAGGCGTGAA+GGG | + | chr8.3:64353559-64353578 | None:intergenic | 40.0% |
| ! | CGCCTTAAACATTTGGAACA+TGG | - | chr8.3:64353563-64353582 | MS.gene071823:intron | 40.0% |
| ! | CTTTGATCCCTAGTTGATGT+TGG | - | chr8.3:64353521-64353540 | MS.gene071823:intron | 40.0% |
| ! | GCTAGACTTGCATTTTTGTC+TGG | - | chr8.3:64353239-64353258 | MS.gene071823:intron | 40.0% |
| ! | TCCAAATGTTTAAGGCGTGA+AGG | + | chr8.3:64353560-64353579 | None:intergenic | 40.0% |
| ! | TTTATGCCATTTGGTCACGA+GGG | - | chr8.3:64353066-64353085 | MS.gene071823:intron | 40.0% |
| ! | TTTGGAACATGGACAACATC+AGG | - | chr8.3:64353574-64353593 | MS.gene071823:intron | 40.0% |
| !! | TCGCCCTTTGAGTTAACTTT+TGG | - | chr8.3:64353857-64353876 | MS.gene071823:intron | 40.0% |
| !! | TTTTATGCCATTTGGTCACG+AGG | - | chr8.3:64353065-64353084 | MS.gene071823:intron | 40.0% |
| AGAGAAATCGGACAGCAACA+AGG | - | chr8.3:64354112-64354131 | MS.gene071823:CDS | 45.0% | |
| AGTCAGACAGGCTCAGAATT+GGG | + | chr8.3:64352609-64352628 | None:intergenic | 45.0% | |
| ATCGTAGAGGTGACAATGAC+TGG | - | chr8.3:64352981-64353000 | MS.gene071823:intron | 45.0% | |
| CAAATATGTGGCGAACTCAC+TGG | + | chr8.3:64352327-64352346 | None:intergenic | 45.0% | |
| CAAGTCTAGCAAGCCTACTA+TGG | + | chr8.3:64353229-64353248 | None:intergenic | 45.0% | |
| CCCTTCACGCCTTAAACATT+TGG | - | chr8.3:64353556-64353575 | MS.gene071823:intron | 45.0% | |
| CGTAAACCGGAAGATGTGAT+CGG | + | chr8.3:64352678-64352697 | None:intergenic | 45.0% | |
| GAAGAGAGAGAGAGACTTAC+AGG | + | chr8.3:64352093-64352112 | None:intergenic | 45.0% | |
| GGTGGCCCAATAACATATCT+AGG | - | chr8.3:64353595-64353614 | MS.gene071823:intron | 45.0% | |
| GTAAACCGGAAGATGTGATC+GGG | + | chr8.3:64352677-64352696 | None:intergenic | 45.0% | |
| TAGTCAGACAGGCTCAGAAT+TGG | + | chr8.3:64352610-64352629 | None:intergenic | 45.0% | |
| TGAGACAGTCTTAGTCAGAC+AGG | + | chr8.3:64352621-64352640 | None:intergenic | 45.0% | |
| ! | AAAAGGACTTTGGGAGCTGA+TGG | - | chr8.3:64352878-64352897 | MS.gene071823:intron | 45.0% |
| ! | AAGATGGTGATGAAGAGGAG+AGG | - | chr8.3:64352412-64352431 | MS.gene071823:intron | 45.0% |
| ! | ACATGTCTTATTGGGTCGGT+CGG | - | chr8.3:64352553-64352572 | MS.gene071823:intron | 45.0% |
| ! | ACTTACAGGGTCAAGAGCAT+TGG | + | chr8.3:64352079-64352098 | None:intergenic | 45.0% |
| !! | CTTACAGGGTCAAGAGCATT+GGG | + | chr8.3:64352078-64352097 | None:intergenic | 45.0% |
| AGAGGCTGCTTAACAGCACA+TGG | - | chr8.3:64352446-64352465 | MS.gene071823:intron | 50.0% | |
| GACACGGCAGCACAAATATG+TGG | + | chr8.3:64352339-64352358 | None:intergenic | 50.0% | |
| GGAACATGGACAACATCAGG+TGG | - | chr8.3:64353577-64353596 | MS.gene071823:intron | 50.0% | |
| GGAGAGGATGGTAACAAGAG+AGG | - | chr8.3:64352428-64352447 | MS.gene071823:intron | 50.0% | |
| GTGAAACCCTCGTGACCAAA+TGG | + | chr8.3:64353075-64353094 | None:intergenic | 50.0% | |
| ! | ATCTGGAGTGTGGACAAGAG+AGG | + | chr8.3:64353749-64353768 | None:intergenic | 50.0% |
| ! | CATGTCTTATTGGGTCGGTC+GGG | - | chr8.3:64352554-64352573 | MS.gene071823:intron | 50.0% |
| ! | TGGTGATGAAGAGGAGAGGA+TGG | - | chr8.3:64352416-64352435 | MS.gene071823:intron | 50.0% |
| !! | AGGGTCAAGAGCATTGGGTT+TGG | + | chr8.3:64352073-64352092 | None:intergenic | 50.0% |
| !! | GGGTCAAGAGCATTGGGTTT+GGG | + | chr8.3:64352072-64352091 | None:intergenic | 50.0% |
| !! | GGTCAAGAGCATTGGGTTTG+GGG | + | chr8.3:64352071-64352090 | None:intergenic | 50.0% |
| AACCGGAAGATGTGATCGGG+CGG | + | chr8.3:64352674-64352693 | None:intergenic | 55.0% | |
| GTGCTGCCGTGTCAGATTTG+TGG | - | chr8.3:64352346-64352365 | MS.gene071823:intron | 55.0% | |
| ! | GGGTTTGGGGCCATAATCAG+CGG | + | chr8.3:64352058-64352077 | None:intergenic | 55.0% |
| AGCCGCCCGATCACATCTTC+CGG | - | chr8.3:64352669-64352688 | MS.gene071823:intron | 60.0% | |
| TGGGTCGGTCGGGTTCATTC+AGG | - | chr8.3:64352564-64352583 | MS.gene071823:intron | 60.0% | |
| GGAAGATGTGATCGGGCGGC+TGG | + | chr8.3:64352670-64352689 | None:intergenic | 65.0% | |
| !! | TGATCGGGCGGCTGGTCTGC+TGG | + | chr8.3:64352662-64352681 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 64351970 | 64354145 | 64351970 | ID=MS.gene071823 |
| chr8.3 | mRNA | 64351970 | 64354145 | 64351970 | ID=MS.gene071823.t1;Parent=MS.gene071823 |
| chr8.3 | exon | 64354023 | 64354145 | 64354023 | ID=MS.gene071823.t1.exon1;Parent=MS.gene071823.t1 |
| chr8.3 | CDS | 64354023 | 64354145 | 64354023 | ID=cds.MS.gene071823.t1;Parent=MS.gene071823.t1 |
| chr8.3 | exon | 64351970 | 64352086 | 64351970 | ID=MS.gene071823.t1.exon2;Parent=MS.gene071823.t1 |
| chr8.3 | CDS | 64351970 | 64352086 | 64351970 | ID=cds.MS.gene071823.t1;Parent=MS.gene071823.t1 |
| Gene Sequence |
| Protein sequence |
