Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072461.t1 | XP_003626302.1 | 97.9 | 382 | 8 | 0 | 6 | 387 | 7 | 388 | 2.20E-201 | 711.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072461.t1 | P46086 | 68.9 | 379 | 110 | 4 | 6 | 383 | 7 | 378 | 1.8e-135 | 483.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072461.t1 | Q2HTL9 | 97.9 | 382 | 8 | 0 | 6 | 387 | 7 | 388 | 1.6e-201 | 711.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050861 | MS.gene072461 | 0.92496 | 3.50E-90 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072461 | MS.gene75011 | PPI |
| MS.gene072461 | MS.gene24606 | PPI |
| MS.gene072461 | MS.gene029829 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072461.t1 | MTR_7g113660 | 97.906 | 382 | 8 | 0 | 6 | 387 | 7 | 388 | 0.0 | 758 |
| MS.gene072461.t1 | MTR_7g113660 | 98.467 | 261 | 4 | 0 | 127 | 387 | 19 | 279 | 0.0 | 522 |
| MS.gene072461.t1 | MTR_2g030260 | 84.444 | 45 | 7 | 0 | 74 | 118 | 9 | 53 | 4.16e-17 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072461.t1 | AT5G27450 | 68.865 | 379 | 110 | 4 | 6 | 383 | 7 | 378 | 0.0 | 517 |
| MS.gene072461.t1 | AT5G27450 | 68.865 | 379 | 110 | 4 | 6 | 383 | 7 | 378 | 0.0 | 517 |
| MS.gene072461.t1 | AT5G27450 | 68.865 | 379 | 110 | 4 | 6 | 383 | 7 | 378 | 0.0 | 517 |
Find 93 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTCTTATTCTACTTAT+TGG | 0.098390 | 7.3:-3441806 | None:intergenic |
| AACTTGATTTGGTAAATAAA+TGG | 0.186049 | 7.3:+3442304 | MS.gene072461:CDS |
| CTTCCTTTGGGATCGGGTTT+GGG | 0.252521 | 7.3:+3442174 | MS.gene072461:CDS |
| TCTTCCTTTGGGATCGGGTT+TGG | 0.254236 | 7.3:+3442173 | MS.gene072461:CDS |
| TCAAGGTCTGCTCCAGAGTA+TGG | 0.261284 | 7.3:+3444958 | MS.gene072461:CDS |
| TATTAATTCTGATCTTCCTT+TGG | 0.266647 | 7.3:+3442161 | MS.gene072461:CDS |
| AATATACCTGAGGCTAAAAT+TGG | 0.267259 | 7.3:+3441920 | MS.gene072461:CDS |
| CAACAAGGGTGGCATTCTTT+TGG | 0.277254 | 7.3:+3442273 | MS.gene072461:CDS |
| GCTAAAATTGGACTTGCTTC+TGG | 0.281138 | 7.3:+3441932 | MS.gene072461:CDS |
| ATCGTTGAGACTTGTGTTAA+AGG | 0.299741 | 7.3:+3441760 | MS.gene072461:CDS |
| ATTAATTCTGATCTTCCTTT+GGG | 0.302065 | 7.3:+3442162 | MS.gene072461:CDS |
| CAATGTTTCACTGCCGGAAT+TGG | 0.324178 | 7.3:+3445281 | MS.gene072461:CDS |
| TGGAGAGAAGGAACTTGATT+TGG | 0.330091 | 7.3:+3442293 | MS.gene072461:CDS |
| TGGTTATATTCTTCTATTCA+AGG | 0.336903 | 7.3:+3441971 | MS.gene072461:CDS |
| AGAGAAGGTAGAAGAGCTAA+TGG | 0.345464 | 7.3:+3444928 | MS.gene072461:CDS |
| GATAACAAAGAAACAGATTC+AGG | 0.360230 | 7.3:-3441833 | None:intergenic |
| TCTGATCTTCCTTTGGGATC+GGG | 0.381978 | 7.3:+3442168 | MS.gene072461:CDS |
| TGATAAAGTGATTGCTGAAC+TGG | 0.386649 | 7.3:+3445244 | MS.gene072461:CDS |
| TTCTGATCTTCCTTTGGGAT+CGG | 0.387010 | 7.3:+3442167 | MS.gene072461:CDS |
| ACTTGATTTGGTAAATAAAT+GGG | 0.390031 | 7.3:+3442305 | MS.gene072461:CDS |
| AAGTTGACAGGAGCTGGTGG+TGG | 0.392697 | 7.3:+3445043 | MS.gene072461:CDS |
| GACAACACAGTTAGTTCATA+TGG | 0.397884 | 7.3:+3442372 | MS.gene072461:CDS |
| AACACAAAAGCCATGGCATC+CGG | 0.399291 | 7.3:-3444821 | None:intergenic |
| CGCGGCATTCTGTGTGGCAC+TGG | 0.408652 | 7.3:+3442203 | MS.gene072461:CDS |
| AACACCATTCCCACCAATTC+CGG | 0.409209 | 7.3:-3445294 | None:intergenic |
| CACTCAACAGAACATGAATT+AGG | 0.425612 | 7.3:-3441863 | None:intergenic |
| ACTAACTGTGTTGTCAATTC+CGG | 0.449491 | 7.3:-3442364 | None:intergenic |
| GCTCATCCGGTGTAGGTGAC+TGG | 0.461654 | 7.3:-3444886 | None:intergenic |
| AACATAATCAGCTTCAAGTC+TGG | 0.462867 | 7.3:+3444683 | MS.gene072461:CDS |
| TTGACAGGAGCTGGTGGTGG+GGG | 0.464564 | 7.3:+3445046 | MS.gene072461:CDS |
| TGTTTCACTGCCGGAATTGG+TGG | 0.467722 | 7.3:+3445284 | MS.gene072461:CDS |
| ATCATTCATGGAAAGCCATC+CGG | 0.472952 | 7.3:+3442345 | MS.gene072461:CDS |
| GAGGTTAAAGCCAGGGCTCC+CGG | 0.477265 | 7.3:+3441514 | MS.gene072461:intron |
| TCTTCTAAGTTGACAGGAGC+TGG | 0.495981 | 7.3:+3445037 | MS.gene072461:CDS |
| TTGCTGAACTGGAGTCAAAC+GGG | 0.497231 | 7.3:+3445255 | MS.gene072461:CDS |
| CAAGGTCTGCTCCAGAGTAT+GGG | 0.502791 | 7.3:+3444959 | MS.gene072461:CDS |
| GGGGAACACGCCGTTGTTCA+CGG | 0.502857 | 7.3:+3441553 | MS.gene072461:CDS |
| GGTTATATTCTTCTATTCAA+GGG | 0.504785 | 7.3:+3441972 | MS.gene072461:CDS |
| AGTTGACAGGAGCTGGTGGT+GGG | 0.505018 | 7.3:+3445044 | MS.gene072461:CDS |
| ATTGCTGAACTGGAGTCAAA+CGG | 0.508713 | 7.3:+3445254 | MS.gene072461:CDS |
| AAACTATCTTCTAAGTTGAC+AGG | 0.511442 | 7.3:+3445031 | MS.gene072461:CDS |
| GAGACTTGTGTTAAAGGATA+CGG | 0.515191 | 7.3:+3441766 | MS.gene072461:CDS |
| TGAGAGAATGCTGAGGCACC+CGG | 0.517407 | 7.3:+3444802 | MS.gene072461:CDS |
| TGTGTTAAAGGATACGGCAT+TGG | 0.519070 | 7.3:+3441772 | MS.gene072461:CDS |
| GTAGTAACAGAGAGCTCATC+CGG | 0.519204 | 7.3:-3444899 | None:intergenic |
| GTGAACAACGGCGTGTTCCC+CGG | 0.523186 | 7.3:-3441551 | None:intergenic |
| GCTGAGGCACCCGGATGCCA+TGG | 0.525360 | 7.3:+3444811 | MS.gene072461:CDS |
| GGGTTCCAATGTTTCACTGC+CGG | 0.531775 | 7.3:+3445275 | MS.gene072461:CDS |
| AACACAAAAGCATTGGTGGC+TGG | 0.533344 | 7.3:+3444773 | MS.gene072461:CDS |
| CAATTCCGGCAGTGAAACAT+TGG | 0.536185 | 7.3:-3445280 | None:intergenic |
| GAGCTAATGGAAATGAATCA+AGG | 0.537369 | 7.3:+3444941 | MS.gene072461:CDS |
| GTTTCTACCTACTCTCGTGT+TGG | 0.538490 | 7.3:-3444753 | None:intergenic |
| GTTGACAGGAGCTGGTGGTG+GGG | 0.540263 | 7.3:+3445045 | MS.gene072461:CDS |
| GAATTAATAACCACAATAGC+AGG | 0.540525 | 7.3:-3442147 | None:intergenic |
| TAGAAACACAAAAGCATTGG+TGG | 0.548306 | 7.3:+3444769 | MS.gene072461:CDS |
| TAGATTCAAGCCTGCTATTG+TGG | 0.551090 | 7.3:+3442137 | MS.gene072461:intron |
| TCGAAGAACAGTTTCTATTG+TGG | 0.554326 | 7.3:-3444993 | None:intergenic |
| GAGAGTACCAGAAGAAGGAG+TGG | 0.555723 | 7.3:-3441632 | None:intergenic |
| AGGGAGAGAGTACCAGAAGA+AGG | 0.558485 | 7.3:-3441637 | None:intergenic |
| AAGGTCTGCTCCAGAGTATG+GGG | 0.559637 | 7.3:+3444960 | MS.gene072461:CDS |
| TGTTACTGATTCTGTTTCTG+TGG | 0.559785 | 7.3:+3442242 | MS.gene072461:CDS |
| ACTGCCGGAATTGGTGGGAA+TGG | 0.562498 | 7.3:+3445290 | MS.gene072461:CDS |
| ATCGGGTTTGGGTTCATCCG+CGG | 0.562556 | 7.3:+3442185 | MS.gene072461:CDS |
| ACACAAAAGCCATGGCATCC+GGG | 0.565975 | 7.3:-3444820 | None:intergenic |
| TGTTACTACGTTAGAAGAGA+AGG | 0.578030 | 7.3:+3444913 | MS.gene072461:CDS |
| GTTTCACTGCCGGAATTGGT+GGG | 0.590532 | 7.3:+3445285 | MS.gene072461:CDS |
| AGGTAGAAACACAAAAGCAT+TGG | 0.593702 | 7.3:+3444766 | MS.gene072461:CDS |
| ATCACTTTATCAACAACTGT+GGG | 0.598264 | 7.3:-3445233 | None:intergenic |
| GGCATTCTGTGTGGCACTGG+CGG | 0.602276 | 7.3:+3442206 | MS.gene072461:CDS |
| AGAATATAACCAAAGAAAAG+CGG | 0.602328 | 7.3:-3441960 | None:intergenic |
| ACAGAGAGCTCATCCGGTGT+AGG | 0.603559 | 7.3:-3444893 | None:intergenic |
| CAGAAGAAGGAGTGGAAAAG+CGG | 0.605331 | 7.3:-3441624 | None:intergenic |
| CGTTCTCCAGTCACCTACAC+CGG | 0.610987 | 7.3:+3444880 | MS.gene072461:CDS |
| CTCATTACCAACACGAGAGT+AGG | 0.619693 | 7.3:+3444746 | MS.gene072461:CDS |
| CTGTGGATGTGATGCAACAA+GGG | 0.621460 | 7.3:+3442259 | MS.gene072461:CDS |
| TCTAAGTTGACAGGAGCTGG+TGG | 0.621573 | 7.3:+3445040 | MS.gene072461:CDS |
| CGGTGTAGGTGACTGGAGAA+CGG | 0.623737 | 7.3:-3444879 | None:intergenic |
| AGCAGTAAACACAAAAGCCA+TGG | 0.628486 | 7.3:-3444828 | None:intergenic |
| GGCGGTTGATCCGTGAACAA+CGG | 0.630354 | 7.3:-3441563 | None:intergenic |
| AATCACTTTATCAACAACTG+TGG | 0.633979 | 7.3:-3445234 | None:intergenic |
| TAAGTCAATAGAAGAAGCAA+CGG | 0.636222 | 7.3:-3441584 | None:intergenic |
| TCAAGTCTGGTAACTTGACA+CGG | 0.638234 | 7.3:+3444696 | MS.gene072461:CDS |
| TCTGTGGATGTGATGCAACA+AGG | 0.639120 | 7.3:+3442258 | MS.gene072461:CDS |
| TTCATCCGCGGCATTCTGTG+TGG | 0.639325 | 7.3:+3442197 | MS.gene072461:CDS |
| ACTGTGTTGTCAATTCCGGA+TGG | 0.645767 | 7.3:-3442360 | None:intergenic |
| GAACCCAAACCCGATCCCAA+AGG | 0.654625 | 7.3:-3442177 | None:intergenic |
| TGAAAACCTTAATATACCTG+AGG | 0.661761 | 7.3:+3441910 | MS.gene072461:CDS |
| GTCAATAGAAGAAGCAACGG+CGG | 0.668901 | 7.3:-3441581 | None:intergenic |
| CAGTGCCACACAGAATGCCG+CGG | 0.676093 | 7.3:-3442202 | None:intergenic |
| GGAAAAGCGGAGAGAAACGT+AGG | 0.687796 | 7.3:-3441611 | None:intergenic |
| GTGTTTCTGAGAGAATGCTG+AGG | 0.704427 | 7.3:+3444795 | MS.gene072461:CDS |
| TGGATGTGATGCAACAAGGG+TGG | 0.717984 | 7.3:+3442262 | MS.gene072461:CDS |
| AGGTCTGCTCCAGAGTATGG+GGG | 0.723783 | 7.3:+3444961 | MS.gene072461:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATATATATAATTTTAT+TGG | - | chr7.3:3443794-3443813 | None:intergenic | 0.0% |
| !!! | TAAAATATATATAATTTTAT+TGG | - | chr7.3:3443742-3443761 | None:intergenic | 0.0% |
| !! | TTTAGTATTAAATTTATTAG+TGG | - | chr7.3:3443100-3443119 | None:intergenic | 10.0% |
| !! | AGGATTTAATTAATTTAACT+GGG | + | chr7.3:3441708-3441727 | MS.gene072461:intron | 15.0% |
| !! | ATTCGTAATATGAAATAAAA+GGG | + | chr7.3:3443184-3443203 | MS.gene072461:intron | 15.0% |
| !! | TATCTTAACATTTACATATT+TGG | + | chr7.3:3442473-3442492 | MS.gene072461:intron | 15.0% |
| !! | TATTCGTAATATGAAATAAA+AGG | + | chr7.3:3443183-3443202 | MS.gene072461:intron | 15.0% |
| !!! | AAAATTTCATATTCTTTTGT+TGG | + | chr7.3:3442403-3442422 | MS.gene072461:intron | 15.0% |
| !!! | AAATAATGATTTTAGTTACT+TGG | - | chr7.3:3442925-3442944 | None:intergenic | 15.0% |
| !!! | ATTTCTGTATTTTTACAAAA+CGG | + | chr7.3:3443536-3443555 | MS.gene072461:intron | 15.0% |
| !!! | TTTTTAACCTAATATCAATT+TGG | + | chr7.3:3444398-3444417 | MS.gene072461:intron | 15.0% |
| !! | CATTAATCATATATCATTAG+AGG | + | chr7.3:3441688-3441707 | MS.gene072461:intron | 20.0% |
| !! | GAGGATTTAATTAATTTAAC+TGG | + | chr7.3:3441707-3441726 | MS.gene072461:intron | 20.0% |
| !! | TAATCAATCATTTCAATCAA+TGG | + | chr7.3:3441492-3441511 | MS.gene072461:intron | 20.0% |
| !! | TCAAGAAACTCAAATTAAAT+TGG | - | chr7.3:3444444-3444463 | None:intergenic | 20.0% |
| !!! | AACTTGATTTGGTAAATAAA+TGG | + | chr7.3:3442304-3442323 | MS.gene072461:CDS | 20.0% |
| !!! | ACTTGATTTGGTAAATAAAT+GGG | + | chr7.3:3442305-3442324 | MS.gene072461:CDS | 20.0% |
| !!! | ATATTTCGATTTTGAAATCA+AGG | + | chr7.3:3443486-3443505 | MS.gene072461:intron | 20.0% |
| !!! | GAAATTTTGAGTAATGTTTA+AGG | - | chr7.3:3443157-3443176 | None:intergenic | 20.0% |
| !!! | GTTTGAGTTTTTATCAAAAT+CGG | + | chr7.3:3443906-3443925 | MS.gene072461:intron | 20.0% |
| !!! | TATTTCGATTTTGAAATCAA+GGG | + | chr7.3:3443487-3443506 | MS.gene072461:intron | 20.0% |
| !!! | TTTCTGTATTTTTACAAAAC+GGG | + | chr7.3:3443537-3443556 | MS.gene072461:intron | 20.0% |
| !!! | TTTGAGTTTTTATCAAAATC+GGG | + | chr7.3:3443907-3443926 | MS.gene072461:intron | 20.0% |
| !!! | TTTTCAATAATGACCATTAT+CGG | + | chr7.3:3441407-3441426 | MS.gene072461:intron | 20.0% |
| ! | AGAATAAACACCAAAAAGTT+TGG | + | chr7.3:3444083-3444102 | MS.gene072461:intron | 25.0% |
| ! | AGAATATAACCAAAGAAAAG+CGG | - | chr7.3:3441963-3441982 | None:intergenic | 25.0% |
| ! | AGTAGAGGAATTACAATTTA+AGG | + | chr7.3:3443604-3443623 | MS.gene072461:intron | 25.0% |
| ! | ATGATTAATGAGAAGATTAG+AGG | - | chr7.3:3441678-3441697 | None:intergenic | 25.0% |
| ! | ATGTAAATGTTAAGATAGCA+TGG | - | chr7.3:3442470-3442489 | None:intergenic | 25.0% |
| ! | ATTAATTCTGATCTTCCTTT+GGG | + | chr7.3:3442162-3442181 | MS.gene072461:CDS | 25.0% |
| ! | GAATAAACACCAAAAAGTTT+GGG | + | chr7.3:3444084-3444103 | MS.gene072461:intron | 25.0% |
| ! | GCATTAGAAACATACATTAA+TGG | - | chr7.3:3444370-3444389 | None:intergenic | 25.0% |
| ! | GGTTATATTCTTCTATTCAA+GGG | + | chr7.3:3441972-3441991 | MS.gene072461:CDS | 25.0% |
| ! | GTAGAGGAATTACAATTTAA+GGG | + | chr7.3:3443605-3443624 | MS.gene072461:intron | 25.0% |
| ! | TAACCTAATATCAATTTGGT+AGG | + | chr7.3:3444402-3444421 | MS.gene072461:intron | 25.0% |
| ! | TATTAATTCTGATCTTCCTT+TGG | + | chr7.3:3442161-3442180 | MS.gene072461:CDS | 25.0% |
| ! | TGATTAATGAGAAGATTAGA+GGG | - | chr7.3:3441677-3441696 | None:intergenic | 25.0% |
| ! | TGGTTATATTCTTCTATTCA+AGG | + | chr7.3:3441971-3441990 | MS.gene072461:CDS | 25.0% |
| ! | TTCAATGAATAGTTTGATCT+TGG | + | chr7.3:3442946-3442965 | MS.gene072461:intron | 25.0% |
| ! | TTGCTATATATGATATATCC+AGG | - | chr7.3:3444184-3444203 | None:intergenic | 25.0% |
| !! | ATTAAGGTTTTCAACTAAAG+CGG | - | chr7.3:3441903-3441922 | None:intergenic | 25.0% |
| !! | ATTACTAATGGTTATTGGTT+TGG | + | chr7.3:3444123-3444142 | MS.gene072461:intron | 25.0% |
| !! | ATTTGGTACAACTTTTGTAA+TGG | + | chr7.3:3442973-3442992 | MS.gene072461:intron | 25.0% |
| !! | GTTATCGTTTTACTATTGAT+AGG | + | chr7.3:3443255-3443274 | MS.gene072461:intron | 25.0% |
| !! | TTCTTTGTTCATGAAGATTT+TGG | - | chr7.3:3442883-3442902 | None:intergenic | 25.0% |
| !! | TTTGGTACAACTTTTGTAAT+GGG | + | chr7.3:3442974-3442993 | MS.gene072461:intron | 25.0% |
| !!! | AACTTTTTGGTGTTTATTCT+AGG | - | chr7.3:3444083-3444102 | None:intergenic | 25.0% |
| !!! | AGTTATTTTAAGTCCATATG+CGG | + | chr7.3:3443865-3443884 | MS.gene072461:intron | 25.0% |
| !!! | TGTACAAATTTTGACTCTTT+TGG | + | chr7.3:3444577-3444596 | MS.gene072461:intron | 25.0% |
| !!! | TTCTGTATTTTTACAAAACG+GGG | + | chr7.3:3443538-3443557 | MS.gene072461:intron | 25.0% |
| AATATACCTGAGGCTAAAAT+TGG | + | chr7.3:3441920-3441939 | MS.gene072461:CDS | 30.0% | |
| AATCACTTTATCAACAACTG+TGG | - | chr7.3:3445237-3445256 | None:intergenic | 30.0% | |
| ACAAGGAAAAAGAAGCAAAA+AGG | - | chr7.3:3442505-3442524 | None:intergenic | 30.0% | |
| ACCAATAACCATTAGTAATC+TGG | - | chr7.3:3444122-3444141 | None:intergenic | 30.0% | |
| ACTCAATAATTGTCATCATC+AGG | + | chr7.3:3444659-3444678 | MS.gene072461:intron | 30.0% | |
| AGAAAATCATCACTCTAGAT+AGG | + | chr7.3:3442607-3442626 | MS.gene072461:intron | 30.0% | |
| AGCAACAGAATCAAAACATA+CGG | - | chr7.3:3442108-3442127 | None:intergenic | 30.0% | |
| AGTCCTACCAAATTGATATT+AGG | - | chr7.3:3444408-3444427 | None:intergenic | 30.0% | |
| ATCACTTTATCAACAACTGT+GGG | - | chr7.3:3445236-3445255 | None:intergenic | 30.0% | |
| ATTCAATCTGTTGTCAAAAG+CGG | - | chr7.3:3443381-3443400 | None:intergenic | 30.0% | |
| GAAAATCATCACTCTAGATA+GGG | + | chr7.3:3442608-3442627 | MS.gene072461:intron | 30.0% | |
| GAATTAATAACCACAATAGC+AGG | - | chr7.3:3442150-3442169 | None:intergenic | 30.0% | |
| GATAACAAAGAAACAGATTC+AGG | - | chr7.3:3441836-3441855 | None:intergenic | 30.0% | |
| GATGATGACAATTATTGAGT+GGG | - | chr7.3:3444659-3444678 | None:intergenic | 30.0% | |
| GCTTCTCTTATTCTACTTAT+TGG | - | chr7.3:3441809-3441828 | None:intergenic | 30.0% | |
| TAAGTCAATAGAAGAAGCAA+CGG | - | chr7.3:3441587-3441606 | None:intergenic | 30.0% | |
| TACAACTTGAATCTTCTGTT+AGG | + | chr7.3:3442535-3442554 | MS.gene072461:intron | 30.0% | |
| TCAATCATTTCAATCAATGG+AGG | + | chr7.3:3441495-3441514 | MS.gene072461:intron | 30.0% | |
| TGAAAACCTTAATATACCTG+AGG | + | chr7.3:3441910-3441929 | MS.gene072461:CDS | 30.0% | |
| ! | AAACTATCTTCTAAGTTGAC+AGG | + | chr7.3:3445031-3445050 | MS.gene072461:CDS | 30.0% |
| ! | ATTTGTTAAGATGAAGTACC+TGG | + | chr7.3:3444163-3444182 | MS.gene072461:intron | 30.0% |
| ! | GAATTTCAATGTGAGAGTAT+AGG | + | chr7.3:3442565-3442584 | MS.gene072461:intron | 30.0% |
| ! | TGAAAACGACATCGTATTTT+TGG | - | chr7.3:3441393-3441412 | None:intergenic | 30.0% |
| ! | TGATGATGACAATTATTGAG+TGG | - | chr7.3:3444660-3444679 | None:intergenic | 30.0% |
| ! | TTTTAGCCTCAGGTATATTA+AGG | - | chr7.3:3441919-3441938 | None:intergenic | 30.0% |
| !! | AGATTCAAGTTGTAATCACT+AGG | - | chr7.3:3442529-3442548 | None:intergenic | 30.0% |
| !! | ATCATTGATTTCTCCGATAA+TGG | - | chr7.3:3441423-3441442 | None:intergenic | 30.0% |
| !! | ATTGATTTGAAGTGAGATGA+AGG | - | chr7.3:3442010-3442029 | None:intergenic | 30.0% |
| !! | ATTTTAAGTCCATATGCAGT+CGG | + | chr7.3:3443756-3443775 | MS.gene072461:intron | 30.0% |
| !! | GTAAATAAATGGGCTTTTGA+GGG | + | chr7.3:3442315-3442334 | MS.gene072461:CDS | 30.0% |
| !!! | ACAAATTTTGACTCTTTTGG+AGG | + | chr7.3:3444580-3444599 | MS.gene072461:intron | 30.0% |
| !!! | GTTGGTAATGAGCATTTTAA+GGG | - | chr7.3:3444738-3444757 | None:intergenic | 30.0% |
| !!! | TGTTGGTAATGAGCATTTTA+AGG | - | chr7.3:3444739-3444758 | None:intergenic | 30.0% |
| AAAAGTCTCATTGCAGAACT+TGG | - | chr7.3:3444289-3444308 | None:intergenic | 35.0% | |
| AACATAATCAGCTTCAAGTC+TGG | + | chr7.3:3444683-3444702 | MS.gene072461:CDS | 35.0% | |
| AAGAAATACACAGTAGTGTC+TGG | + | chr7.3:3444534-3444553 | MS.gene072461:intron | 35.0% | |
| ACCTGTTAGATCTGAAGAAA+AGG | + | chr7.3:3443413-3443432 | MS.gene072461:intron | 35.0% | |
| ACTAACTGTGTTGTCAATTC+CGG | - | chr7.3:3442367-3442386 | None:intergenic | 35.0% | |
| AGAAAAGGTTATGTCTTGAG+AGG | + | chr7.3:3443428-3443447 | MS.gene072461:intron | 35.0% | |
| AGTTGTAATCACTAGGAACA+AGG | - | chr7.3:3442522-3442541 | None:intergenic | 35.0% | |
| AGTTTGATCTTGGACAGATT+TGG | + | chr7.3:3442956-3442975 | MS.gene072461:intron | 35.0% | |
| ATCGTTGAGACTTGTGTTAA+AGG | + | chr7.3:3441760-3441779 | MS.gene072461:CDS | 35.0% | |
| ATGAGAAGATTAGAGGGAAA+AGG | - | chr7.3:3441671-3441690 | None:intergenic | 35.0% | |
| CACTCAACAGAACATGAATT+AGG | - | chr7.3:3441866-3441885 | None:intergenic | 35.0% | |
| GACAACACAGTTAGTTCATA+TGG | + | chr7.3:3442372-3442391 | MS.gene072461:CDS | 35.0% | |
| GAGACTTGTGTTAAAGGATA+CGG | + | chr7.3:3441766-3441785 | MS.gene072461:CDS | 35.0% | |
| GAGCTAATGGAAATGAATCA+AGG | + | chr7.3:3444941-3444960 | MS.gene072461:CDS | 35.0% | |
| GAGGGTGAAAAAATCATTCA+TGG | + | chr7.3:3442333-3442352 | MS.gene072461:CDS | 35.0% | |
| GCCAGATTACTAATGGTTAT+TGG | + | chr7.3:3444118-3444137 | MS.gene072461:intron | 35.0% | |
| GTATGATGCCAGATTACTAA+TGG | + | chr7.3:3444111-3444130 | MS.gene072461:intron | 35.0% | |
| TAAGTAGAAAGCGGTTAAAG+CGG | - | chr7.3:3443282-3443301 | None:intergenic | 35.0% | |
| TCGAAGAACAGTTTCTATTG+TGG | - | chr7.3:3444996-3445015 | None:intergenic | 35.0% | |
| TCTTGATTCTGTTGTCAATG+CGG | + | chr7.3:3443000-3443019 | MS.gene072461:intron | 35.0% | |
| TGATAAAGTGATTGCTGAAC+TGG | + | chr7.3:3445244-3445263 | MS.gene072461:CDS | 35.0% | |
| TGTTACTACGTTAGAAGAGA+AGG | + | chr7.3:3444913-3444932 | MS.gene072461:CDS | 35.0% | |
| TTGCATTTCAAATATTCGCG+CGG | + | chr7.3:3442056-3442075 | MS.gene072461:intron | 35.0% | |
| ! | ACCTTTTCTTCAGATCTAAC+AGG | - | chr7.3:3443417-3443436 | None:intergenic | 35.0% |
| ! | AGGTAGAAACACAAAAGCAT+TGG | + | chr7.3:3444766-3444785 | MS.gene072461:CDS | 35.0% |
| ! | CATACAGATCCCAAACTTTT+TGG | - | chr7.3:3444096-3444115 | None:intergenic | 35.0% |
| ! | TAGGGTTTGAGACTTTGATT+TGG | + | chr7.3:3443680-3443699 | MS.gene072461:intron | 35.0% |
| ! | TTTTGTCTCTTTTCTTGACG+AGG | + | chr7.3:3444305-3444324 | MS.gene072461:intron | 35.0% |
| !! | ATACGGCATTGGAATTTTCA+TGG | + | chr7.3:3441783-3441802 | MS.gene072461:CDS | 35.0% |
| !! | GGTAAATAAATGGGCTTTTG+AGG | + | chr7.3:3442314-3442333 | MS.gene072461:CDS | 35.0% |
| !! | GTATTTTTACAAAACGGGGT+GGG | + | chr7.3:3443542-3443561 | MS.gene072461:intron | 35.0% |
| !! | GTTATTGGTTTGGATCACTA+AGG | + | chr7.3:3444133-3444152 | MS.gene072461:intron | 35.0% |
| !! | TAGAAACACAAAAGCATTGG+TGG | + | chr7.3:3444769-3444788 | MS.gene072461:CDS | 35.0% |
| !! | TGTATTTTTACAAAACGGGG+TGG | + | chr7.3:3443541-3443560 | MS.gene072461:intron | 35.0% |
| !! | TGTTACTGATTCTGTTTCTG+TGG | + | chr7.3:3442242-3442261 | MS.gene072461:CDS | 35.0% |
| !! | TTTTAAGTCCATATGCAGTC+GGG | + | chr7.3:3443757-3443776 | MS.gene072461:intron | 35.0% |
| !!! | AAACGACATCGTATTTTTGG+TGG | - | chr7.3:3441390-3441409 | None:intergenic | 35.0% |
| AAAACATGCCTCCGTTTCTA+CGG | + | chr7.3:3444009-3444028 | MS.gene072461:intron | 40.0% | |
| AAAGGTTATGTCTTGAGAGG+CGG | + | chr7.3:3443431-3443450 | MS.gene072461:intron | 40.0% | |
| AATACTGATCGGTTGAGAGA+AGG | + | chr7.3:3443573-3443592 | MS.gene072461:intron | 40.0% | |
| AATCAATGGAGGTTAAAGCC+AGG | + | chr7.3:3441506-3441525 | MS.gene072461:intron | 40.0% | |
| AGAGAAGGTAGAAGAGCTAA+TGG | + | chr7.3:3444928-3444947 | MS.gene072461:CDS | 40.0% | |
| AGCAGTAAACACAAAAGCCA+TGG | - | chr7.3:3444831-3444850 | None:intergenic | 40.0% | |
| AGGGGGATTAGAGAAATCTA+GGG | + | chr7.3:3443662-3443681 | MS.gene072461:intron | 40.0% | |
| AGTGAAGAGGACATACAAGT+TGG | - | chr7.3:3445091-3445110 | None:intergenic | 40.0% | |
| ATACTGATCGGTTGAGAGAA+GGG | + | chr7.3:3443574-3443593 | MS.gene072461:intron | 40.0% | |
| ATCAATGGAGGTTAAAGCCA+GGG | + | chr7.3:3441507-3441526 | MS.gene072461:intron | 40.0% | |
| ATCATTCATGGAAAGCCATC+CGG | + | chr7.3:3442345-3442364 | MS.gene072461:CDS | 40.0% | |
| ATTGCTGAACTGGAGTCAAA+CGG | + | chr7.3:3445254-3445273 | MS.gene072461:CDS | 40.0% | |
| ATTTCAAATATTCGCGCGGT+CGG | + | chr7.3:3442060-3442079 | MS.gene072461:intron | 40.0% | |
| CTGAAAATCCCAAAACGGAA+TGG | + | chr7.3:3442653-3442672 | MS.gene072461:intron | 40.0% | |
| CTGAGATGCGATTATCACTT+GGG | - | chr7.3:3442822-3442841 | None:intergenic | 40.0% | |
| GATCAAAGCATGTCAAGGAA+AGG | - | chr7.3:3445203-3445222 | None:intergenic | 40.0% | |
| GCGATGCTCAAAATCAGAAT+AGG | + | chr7.3:3444492-3444511 | MS.gene072461:intron | 40.0% | |
| GGTTGAGATATTCTCCTCTT+CGG | - | chr7.3:3442681-3442700 | None:intergenic | 40.0% | |
| TACTGAATGTGTGTTTGTGG+TGG | + | chr7.3:3443703-3443722 | MS.gene072461:intron | 40.0% | |
| TAGATTCAAGCCTGCTATTG+TGG | + | chr7.3:3442137-3442156 | MS.gene072461:intron | 40.0% | |
| TCAAGTCTGGTAACTTGACA+CGG | + | chr7.3:3444696-3444715 | MS.gene072461:CDS | 40.0% | |
| TGGAGAGAAGGAACTTGATT+TGG | + | chr7.3:3442293-3442312 | MS.gene072461:CDS | 40.0% | |
| TGTGTTAAAGGATACGGCAT+TGG | + | chr7.3:3441772-3441791 | MS.gene072461:CDS | 40.0% | |
| ! | GCTAAAATTGGACTTGCTTC+TGG | + | chr7.3:3441932-3441951 | MS.gene072461:CDS | 40.0% |
| ! | GTGTGTTTGTGGTGGAAATA+GGG | + | chr7.3:3443711-3443730 | MS.gene072461:intron | 40.0% |
| ! | TCTGAGATGCGATTATCACT+TGG | - | chr7.3:3442823-3442842 | None:intergenic | 40.0% |
| ! | TGGTACTGAATGTGTGTTTG+TGG | + | chr7.3:3443700-3443719 | MS.gene072461:intron | 40.0% |
| ! | TGTGTGTTTGTGGTGGAAAT+AGG | + | chr7.3:3443710-3443729 | MS.gene072461:intron | 40.0% |
| !! | TATTGAGTGGGTTGCACATT+CGG | - | chr7.3:3444647-3444666 | None:intergenic | 40.0% |
| !! | TTCTGATCTTCCTTTGGGAT+CGG | + | chr7.3:3442167-3442186 | MS.gene072461:CDS | 40.0% |
| !! | TTTTAAGTCCATATGCGGTC+AGG | + | chr7.3:3443870-3443889 | MS.gene072461:intron | 40.0% |
| AAAACGGAATGGAACCGAAG+AGG | + | chr7.3:3442664-3442683 | MS.gene072461:intron | 45.0% | |
| AAACATGCCTCCGTTTCTAC+GGG | + | chr7.3:3444010-3444029 | MS.gene072461:intron | 45.0% | |
| AACACAAAAGCCATGGCATC+CGG | - | chr7.3:3444824-3444843 | None:intergenic | 45.0% | |
| AACACCATTCCCACCAATTC+CGG | - | chr7.3:3445297-3445316 | None:intergenic | 45.0% | |
| AAGGTTATGTCTTGAGAGGC+GGG | + | chr7.3:3443432-3443451 | MS.gene072461:intron | 45.0% | |
| AATCCGATGCTACAAACGGT+CGG | - | chr7.3:3442708-3442727 | None:intergenic | 45.0% | |
| ACTGTGTTGTCAATTCCGGA+TGG | - | chr7.3:3442363-3442382 | None:intergenic | 45.0% | |
| AGAACTTGGCGAATTGGATG+AGG | - | chr7.3:3444275-3444294 | None:intergenic | 45.0% | |
| AGAGGGAAAAGGATTGAGTG+AGG | - | chr7.3:3441660-3441679 | None:intergenic | 45.0% | |
| ATTCGGAGGCAGTAACTAGT+GGG | - | chr7.3:3444630-3444649 | None:intergenic | 45.0% | |
| CAATGTTTCACTGCCGGAAT+TGG | + | chr7.3:3445281-3445300 | MS.gene072461:CDS | 45.0% | |
| CAATTCCGGCAGTGAAACAT+TGG | - | chr7.3:3445283-3445302 | None:intergenic | 45.0% | |
| CAGAAGAAGGAGTGGAAAAG+CGG | - | chr7.3:3441627-3441646 | None:intergenic | 45.0% | |
| CATTGCAGAACTTGGCGAAT+TGG | - | chr7.3:3444281-3444300 | None:intergenic | 45.0% | |
| CCCGGAAAAATCATCTTAGC+CGG | + | chr7.3:3441532-3441551 | MS.gene072461:CDS | 45.0% | |
| CCGGAAAAATCATCTTAGCC+GGG | + | chr7.3:3441533-3441552 | MS.gene072461:CDS | 45.0% | |
| CGGAAAAATCATCTTAGCCG+GGG | + | chr7.3:3441534-3441553 | MS.gene072461:CDS | 45.0% | |
| CTCAACCGATCAGTATTGCA+TGG | - | chr7.3:3443570-3443589 | None:intergenic | 45.0% | |
| CTCATTACCAACACGAGAGT+AGG | + | chr7.3:3444746-3444765 | MS.gene072461:CDS | 45.0% | |
| CTCTAGATAGGGTAGAGCTT+CGG | + | chr7.3:3442619-3442638 | MS.gene072461:intron | 45.0% | |
| CTGTGGATGTGATGCAACAA+GGG | + | chr7.3:3442259-3442278 | MS.gene072461:CDS | 45.0% | |
| GAAGACGACAATGAGTGAAG+AGG | - | chr7.3:3445104-3445123 | None:intergenic | 45.0% | |
| GACCAATCCGATGCTACAAA+CGG | - | chr7.3:3442712-3442731 | None:intergenic | 45.0% | |
| GAGGGAAAAGGATTGAGTGA+GGG | - | chr7.3:3441659-3441678 | None:intergenic | 45.0% | |
| GAGGGGGATTAGAGAAATCT+AGG | + | chr7.3:3443661-3443680 | MS.gene072461:intron | 45.0% | |
| GTAGTAACAGAGAGCTCATC+CGG | - | chr7.3:3444902-3444921 | None:intergenic | 45.0% | |
| GTCAATAGAAGAAGCAACGG+CGG | - | chr7.3:3441584-3441603 | None:intergenic | 45.0% | |
| GTTTCTACCTACTCTCGTGT+TGG | - | chr7.3:3444756-3444775 | None:intergenic | 45.0% | |
| TCGGGCTGAAAATCCCAAAA+CGG | + | chr7.3:3442648-3442667 | MS.gene072461:intron | 45.0% | |
| TCTGTGGATGTGATGCAACA+AGG | + | chr7.3:3442258-3442277 | MS.gene072461:CDS | 45.0% | |
| TTCAACTGTATGCACCTACC+TGG | + | chr7.3:3443930-3443949 | MS.gene072461:intron | 45.0% | |
| TTGCTGAACTGGAGTCAAAC+GGG | + | chr7.3:3445255-3445274 | MS.gene072461:CDS | 45.0% | |
| TTTCAAATATTCGCGCGGTC+GGG | + | chr7.3:3442061-3442080 | MS.gene072461:intron | 45.0% | |
| ! | CAACAAGGGTGGCATTCTTT+TGG | + | chr7.3:3442273-3442292 | MS.gene072461:CDS | 45.0% |
| ! | CCCGGCTAAGATGATTTTTC+CGG | - | chr7.3:3441536-3441555 | None:intergenic | 45.0% |
| ! | CCGGCTAAGATGATTTTTCC+GGG | - | chr7.3:3441535-3441554 | None:intergenic | 45.0% |
| ! | CTTCGGTTCCATTCCGTTTT+GGG | - | chr7.3:3442664-3442683 | None:intergenic | 45.0% |
| ! | GCACTGATCAAAGCATGTCA+AGG | - | chr7.3:3445208-3445227 | None:intergenic | 45.0% |
| ! | GTGTTTCTGAGAGAATGCTG+AGG | + | chr7.3:3444795-3444814 | MS.gene072461:CDS | 45.0% |
| ! | GTTGACCACATCTAGAGTCA+GGG | - | chr7.3:3444061-3444080 | None:intergenic | 45.0% |
| ! | TCTTCGGTTCCATTCCGTTT+TGG | - | chr7.3:3442665-3442684 | None:intergenic | 45.0% |
| ! | TCTTCTAAGTTGACAGGAGC+TGG | + | chr7.3:3445037-3445056 | MS.gene072461:CDS | 45.0% |
| ! | TTCGGTTGAGCAGTTTTGCA+CGG | + | chr7.3:3442745-3442764 | MS.gene072461:intron | 45.0% |
| ! | TTGAGATGAGAGCACGAAGA+GGG | + | chr7.3:3443643-3443662 | MS.gene072461:intron | 45.0% |
| ! | TTTGAGATGAGAGCACGAAG+AGG | + | chr7.3:3443642-3443661 | MS.gene072461:intron | 45.0% |
| !! | AACACAAAAGCATTGGTGGC+TGG | + | chr7.3:3444773-3444792 | MS.gene072461:CDS | 45.0% |
| !! | GCAAGTCCAATTTTAGCCTC+AGG | - | chr7.3:3441929-3441948 | None:intergenic | 45.0% |
| !! | GTGGCATTCTTTTGGAGAGA+AGG | + | chr7.3:3442281-3442300 | MS.gene072461:CDS | 45.0% |
| !! | GTTTGTAGCATCGGATTGGT+CGG | + | chr7.3:3442711-3442730 | MS.gene072461:intron | 45.0% |
| !! | TCTGATCTTCCTTTGGGATC+GGG | + | chr7.3:3442168-3442187 | MS.gene072461:CDS | 45.0% |
| !! | TTTGTAGCATCGGATTGGTC+GGG | + | chr7.3:3442712-3442731 | MS.gene072461:intron | 45.0% |
| !!! | ATTTTTTTTTTTTAATAGTA+TGG | - | chr7.3:3443125-3443144 | None:intergenic | 5.0% |
| AACCAAACCCGTAGAAACGG+AGG | - | chr7.3:3444020-3444039 | None:intergenic | 50.0% | |
| AAGGTCTGCTCCAGAGTATG+GGG | + | chr7.3:3444960-3444979 | MS.gene072461:CDS | 50.0% | |
| ACACAAAAGCCATGGCATCC+GGG | - | chr7.3:3444823-3444842 | None:intergenic | 50.0% | |
| ACCCAAAAATTAGCGCGTCG+CGG | + | chr7.3:3443036-3443055 | MS.gene072461:intron | 50.0% | |
| AGATAGGGTAGAGCTTCGGT+CGG | + | chr7.3:3442623-3442642 | MS.gene072461:intron | 50.0% | |
| AGTCCATATGCAGTCGGGTT+CGG | + | chr7.3:3443762-3443781 | MS.gene072461:intron | 50.0% | |
| AGTCCATATGCGGTCAGGTT+CGG | + | chr7.3:3443875-3443894 | MS.gene072461:intron | 50.0% | |
| ATCCGATGCTACAAACGGTC+GGG | - | chr7.3:3442707-3442726 | None:intergenic | 50.0% | |
| ATGCTACAAACGGTCGGGAA+TGG | - | chr7.3:3442702-3442721 | None:intergenic | 50.0% | |
| ATTCTGTTGTCAATGCGGCG+CGG | + | chr7.3:3443005-3443024 | MS.gene072461:intron | 50.0% | |
| CAAGGTCTGCTCCAGAGTAT+GGG | + | chr7.3:3444959-3444978 | MS.gene072461:CDS | 50.0% | |
| CATTCGGAGGCAGTAACTAG+TGG | - | chr7.3:3444631-3444650 | None:intergenic | 50.0% | |
| CCCAACCAAACCCGTAGAAA+CGG | - | chr7.3:3444023-3444042 | None:intergenic | 50.0% | |
| CGCGTGGCATAAGTAGAAAG+CGG | - | chr7.3:3443291-3443310 | None:intergenic | 50.0% | |
| GAGAAGGGATGACAGAGTAG+AGG | + | chr7.3:3443589-3443608 | MS.gene072461:intron | 50.0% | |
| GGAAAAGCGGAGAGAAACGT+AGG | - | chr7.3:3441614-3441633 | None:intergenic | 50.0% | |
| GGCGGGTGATGAAACAGAAT+CGG | + | chr7.3:3443449-3443468 | MS.gene072461:intron | 50.0% | |
| GGGTTCCAATGTTTCACTGC+CGG | + | chr7.3:3445275-3445294 | MS.gene072461:CDS | 50.0% | |
| GTTTCACTGCCGGAATTGGT+GGG | + | chr7.3:3445285-3445304 | MS.gene072461:CDS | 50.0% | |
| TCAAGGTCTGCTCCAGAGTA+TGG | + | chr7.3:3444958-3444977 | MS.gene072461:CDS | 50.0% | |
| TGGATGTGATGCAACAAGGG+TGG | + | chr7.3:3442262-3442281 | MS.gene072461:CDS | 50.0% | |
| TGTTTCACTGCCGGAATTGG+TGG | + | chr7.3:3445284-3445303 | MS.gene072461:CDS | 50.0% | |
| TTCCCGACCGTTTGTAGCAT+CGG | + | chr7.3:3442702-3442721 | MS.gene072461:intron | 50.0% | |
| ! | CAGAGCGTAGCGGAAAAATC+AGG | - | chr7.3:3443337-3443356 | None:intergenic | 50.0% |
| ! | CCGTTTCTACGGGTTTGGTT+GGG | + | chr7.3:3444020-3444039 | MS.gene072461:intron | 50.0% |
| ! | CGCTTTTCCACTCCTTCTTC+TGG | + | chr7.3:3441625-3441644 | MS.gene072461:CDS | 50.0% |
| ! | GACCGTTTGTAGCATCGGAT+TGG | + | chr7.3:3442707-3442726 | MS.gene072461:intron | 50.0% |
| ! | GAGCAGTTTTGCACGGTTGA+AGG | + | chr7.3:3442752-3442771 | MS.gene072461:intron | 50.0% |
| ! | GGGTGCCATGCAATACTGAT+CGG | + | chr7.3:3443562-3443581 | MS.gene072461:intron | 50.0% |
| ! | GGTTGACCACATCTAGAGTC+AGG | - | chr7.3:3444062-3444081 | None:intergenic | 50.0% |
| ! | TCCGTTTCTACGGGTTTGGT+TGG | + | chr7.3:3444019-3444038 | MS.gene072461:intron | 50.0% |
| ! | TCTAAGTTGACAGGAGCTGG+TGG | + | chr7.3:3445040-3445059 | MS.gene072461:CDS | 50.0% |
| ! | TGAGATGAGAGCACGAAGAG+GGG | + | chr7.3:3443644-3443663 | MS.gene072461:intron | 50.0% |
| !! | AGGGAGAGAGTACCAGAAGA+AGG | - | chr7.3:3441640-3441659 | None:intergenic | 50.0% |
| !! | CTTCCTTTGGGATCGGGTTT+GGG | + | chr7.3:3442174-3442193 | MS.gene072461:CDS | 50.0% |
| !! | GAGAGTACCAGAAGAAGGAG+TGG | - | chr7.3:3441635-3441654 | None:intergenic | 50.0% |
| !! | TCTTCCTTTGGGATCGGGTT+TGG | + | chr7.3:3442173-3442192 | MS.gene072461:CDS | 50.0% |
| !!! | CGACGCGCTAATTTTTGGGT+TGG | - | chr7.3:3443036-3443055 | None:intergenic | 50.0% |
| !!! | CTGGTGTTGCCGCTTTTCTT+TGG | + | chr7.3:3441951-3441970 | MS.gene072461:CDS | 50.0% |
| AAGTTGACAGGAGCTGGTGG+TGG | + | chr7.3:3445043-3445062 | MS.gene072461:CDS | 55.0% | |
| ACAGAGAGCTCATCCGGTGT+AGG | - | chr7.3:3444896-3444915 | None:intergenic | 55.0% | |
| ACTGCCGGAATTGGTGGGAA+TGG | + | chr7.3:3445290-3445309 | MS.gene072461:CDS | 55.0% | |
| AGGTCTGCTCCAGAGTATGG+GGG | + | chr7.3:3444961-3444980 | MS.gene072461:CDS | 55.0% | |
| AGGTGAGCATAGTCAGGTCC+AGG | - | chr7.3:3443951-3443970 | None:intergenic | 55.0% | |
| AGTTGACAGGAGCTGGTGGT+GGG | + | chr7.3:3445044-3445063 | MS.gene072461:CDS | 55.0% | |
| CATGACTGACCCCCATACTC+TGG | - | chr7.3:3444973-3444992 | None:intergenic | 55.0% | |
| CCCAAAAATTAGCGCGTCGC+GGG | + | chr7.3:3443037-3443056 | MS.gene072461:intron | 55.0% | |
| CGGTGTAGGTGACTGGAGAA+CGG | - | chr7.3:3444882-3444901 | None:intergenic | 55.0% | |
| CGTTCTCCAGTCACCTACAC+CGG | + | chr7.3:3444880-3444899 | MS.gene072461:CDS | 55.0% | |
| CTCAGCCCTGACTCTAGATG+TGG | + | chr7.3:3444053-3444072 | MS.gene072461:intron | 55.0% | |
| CTGGGTGGAGACGATTTGAG+CGG | - | chr7.3:3443980-3443999 | None:intergenic | 55.0% | |
| GAACCCAAACCCGATCCCAA+AGG | - | chr7.3:3442180-3442199 | None:intergenic | 55.0% | |
| GACCTGACTATGCTCACCTG+AGG | + | chr7.3:3443952-3443971 | MS.gene072461:intron | 55.0% | |
| GAGCATAGTCAGGTCCAGGT+AGG | - | chr7.3:3443947-3443966 | None:intergenic | 55.0% | |
| GAGTCAGGGCTGAGCATAAC+CGG | - | chr7.3:3444047-3444066 | None:intergenic | 55.0% | |
| GGCGGTTGATCCGTGAACAA+CGG | - | chr7.3:3441566-3441585 | None:intergenic | 55.0% | |
| GTCCTCAGGTGAGCATAGTC+AGG | - | chr7.3:3443957-3443976 | None:intergenic | 55.0% | |
| TCCGCTACGCTCTGCTATAG+CGG | + | chr7.3:3443343-3443362 | MS.gene072461:intron | 55.0% | |
| TGACCGAACCCGACTGCATA+TGG | - | chr7.3:3443768-3443787 | None:intergenic | 55.0% | |
| TGACCGAACCTGACCGCATA+TGG | - | chr7.3:3443881-3443900 | None:intergenic | 55.0% | |
| TGCCTCCGTTTCTACGGGTT+TGG | + | chr7.3:3444015-3444034 | MS.gene072461:intron | 55.0% | |
| TGGGTGGAGACGATTTGAGC+GGG | - | chr7.3:3443979-3443998 | None:intergenic | 55.0% | |
| TTCATCCGCGGCATTCTGTG+TGG | + | chr7.3:3442197-3442216 | MS.gene072461:CDS | 55.0% | |
| ! | ATCGGGTTTGGGTTCATCCG+CGG | + | chr7.3:3442185-3442204 | MS.gene072461:CDS | 55.0% |
| ! | CCCGCGACGCGCTAATTTTT+GGG | - | chr7.3:3443040-3443059 | None:intergenic | 55.0% |
| ! | GAGATGAGAGCACGAAGAGG+GGG | + | chr7.3:3443645-3443664 | MS.gene072461:intron | 55.0% |
| ! | GATGATTTTTCCGGGAGCCC+TGG | - | chr7.3:3441527-3441546 | None:intergenic | 55.0% |
| ! | GGTAGAGCTTCGGTCGGTTT+CGG | + | chr7.3:3442629-3442648 | MS.gene072461:intron | 55.0% |
| ! | GTAGAGCTTCGGTCGGTTTC+GGG | + | chr7.3:3442630-3442649 | MS.gene072461:intron | 55.0% |
| ! | TCCCGCGACGCGCTAATTTT+TGG | - | chr7.3:3443041-3443060 | None:intergenic | 55.0% |
| ! | TCTACGGGTTTGGTTGGGTC+CGG | + | chr7.3:3444025-3444044 | MS.gene072461:intron | 55.0% |
| ! | TGAGAGAATGCTGAGGCACC+CGG | + | chr7.3:3444802-3444821 | MS.gene072461:CDS | 55.0% |
| !! | CGGAGGCATGTTTTGAGCCA+CGG | - | chr7.3:3444003-3444022 | None:intergenic | 55.0% |
| !! | GCATGTTTTGAGCCACGGCT+GGG | - | chr7.3:3443998-3444017 | None:intergenic | 55.0% |
| !! | TGAGTGGGTTGCACATTCGG+AGG | - | chr7.3:3444644-3444663 | None:intergenic | 55.0% |
| !! | TTGCGTAGCGGGCGCTATTT+CGG | + | chr7.3:3443066-3443085 | MS.gene072461:intron | 55.0% |
| AAAATCAGGACCACCGCGCC+AGG | - | chr7.3:3443323-3443342 | None:intergenic | 60.0% | |
| AAATCGTCTCCACCCAGCCG+TGG | + | chr7.3:3443983-3444002 | MS.gene072461:intron | 60.0% | |
| AAATTAGCGCGTCGCGGGAG+TGG | + | chr7.3:3443042-3443061 | MS.gene072461:intron | 60.0% | |
| AATTAGCGCGTCGCGGGAGT+GGG | + | chr7.3:3443043-3443062 | MS.gene072461:intron | 60.0% | |
| ACTTATGCCACGCGCCAACG+CGG | + | chr7.3:3443297-3443316 | MS.gene072461:intron | 60.0% | |
| CAGTGCCACACAGAATGCCG+CGG | - | chr7.3:3442205-3442224 | None:intergenic | 60.0% | |
| GACGATTTGAGCGGGTCCTC+AGG | - | chr7.3:3443971-3443990 | None:intergenic | 60.0% | |
| GAGGTTAAAGCCAGGGCTCC+CGG | + | chr7.3:3441514-3441533 | MS.gene072461:intron | 60.0% | |
| GCCGCTATAGCAGAGCGTAG+CGG | - | chr7.3:3443347-3443366 | None:intergenic | 60.0% | |
| GCTACGCTCTGCTATAGCGG+CGG | + | chr7.3:3443346-3443365 | MS.gene072461:intron | 60.0% | |
| GCTCATCCGGTGTAGGTGAC+TGG | - | chr7.3:3444889-3444908 | None:intergenic | 60.0% | |
| GGGGAACACGCCGTTGTTCA+CGG | + | chr7.3:3441553-3441572 | MS.gene072461:CDS | 60.0% | |
| GTGAACAACGGCGTGTTCCC+CGG | - | chr7.3:3441554-3441573 | None:intergenic | 60.0% | |
| GTTGTCAAAAGCGGCCGCAC+CGG | - | chr7.3:3443372-3443391 | None:intergenic | 60.0% | |
| ! | GGCATTCTGTGTGGCACTGG+CGG | + | chr7.3:3442206-3442225 | MS.gene072461:CDS | 60.0% |
| ! | GTTGACAGGAGCTGGTGGTG+GGG | + | chr7.3:3445045-3445064 | MS.gene072461:CDS | 60.0% |
| ! | TGGTCGGGTGGCGGTTTGTT+CGG | + | chr7.3:3442727-3442746 | MS.gene072461:intron | 60.0% |
| !! | GGCATGTTTTGAGCCACGGC+TGG | - | chr7.3:3443999-3444018 | None:intergenic | 60.0% |
| !! | GTAGCATCGGATTGGTCGGG+TGG | + | chr7.3:3442715-3442734 | MS.gene072461:intron | 60.0% |
| !! | TGTTTTGAGCCACGGCTGGG+TGG | - | chr7.3:3443995-3444014 | None:intergenic | 60.0% |
| !! | TTGACAGGAGCTGGTGGTGG+GGG | + | chr7.3:3445046-3445065 | MS.gene072461:CDS | 60.0% |
| CGCGGCATTCTGTGTGGCAC+TGG | + | chr7.3:3442203-3442222 | MS.gene072461:CDS | 65.0% | |
| GTTGTCAATGCGGCGCGGAG+CGG | + | chr7.3:3443010-3443029 | MS.gene072461:intron | 65.0% | |
| ! | CGGGCGCTATTTCGGTGGTG+TGG | + | chr7.3:3443074-3443093 | MS.gene072461:intron | 65.0% |
| ! | GCGGTCAGGTTCGGTCAGTG+CGG | + | chr7.3:3443884-3443903 | MS.gene072461:intron | 65.0% |
| !! | CGTAGCGGGCGCTATTTCGG+TGG | + | chr7.3:3443069-3443088 | MS.gene072461:intron | 65.0% |
| !! | GCATCGGATTGGTCGGGTGG+CGG | + | chr7.3:3442718-3442737 | MS.gene072461:intron | 65.0% |
| CGCTCTGCTATAGCGGCGGC+CGG | + | chr7.3:3443350-3443369 | MS.gene072461:intron | 70.0% | |
| TGCTATAGCGGCGGCCGGTG+CGG | + | chr7.3:3443355-3443374 | MS.gene072461:intron | 70.0% | |
| ! | GCTGAGGCACCCGGATGCCA+TGG | + | chr7.3:3444811-3444830 | MS.gene072461:CDS | 70.0% |
| !! | CGCGGGAGTGGGTTGCGTAG+CGG | + | chr7.3:3443054-3443073 | MS.gene072461:intron | 70.0% |
| !! | GCGGGAGTGGGTTGCGTAGC+GGG | + | chr7.3:3443055-3443074 | MS.gene072461:intron | 70.0% |
| ! | ACCACCGCGCCAGGCCGCGT+TGG | - | chr7.3:3443314-3443333 | None:intergenic | 80.0% |
| ! | TGCCACGCGCCAACGCGGCC+TGG | + | chr7.3:3443302-3443321 | MS.gene072461:intron | 80.0% |
| ! | CGCGCCAACGCGGCCTGGCG+CGG | + | chr7.3:3443307-3443326 | MS.gene072461:intron | 85.0% |
| ! | GCCAACGCGGCCTGGCGCGG+TGG | + | chr7.3:3443310-3443329 | MS.gene072461:intron | 85.0% |
| !! | CGCCAGGCCGCGTTGGCGCG+TGG | - | chr7.3:3443307-3443326 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 3441352 | 3445343 | 3441352 | ID=MS.gene072461 |
| chr7.3 | mRNA | 3441352 | 3445343 | 3441352 | ID=MS.gene072461.t1;Parent=MS.gene072461 |
| chr7.3 | exon | 3441352 | 3441365 | 3441352 | ID=MS.gene072461.t1.exon1;Parent=MS.gene072461.t1 |
| chr7.3 | CDS | 3441352 | 3441365 | 3441352 | ID=cds.MS.gene072461.t1;Parent=MS.gene072461.t1 |
| chr7.3 | exon | 3441528 | 3441646 | 3441528 | ID=MS.gene072461.t1.exon2;Parent=MS.gene072461.t1 |
| chr7.3 | CDS | 3441528 | 3441646 | 3441528 | ID=cds.MS.gene072461.t1;Parent=MS.gene072461.t1 |
| chr7.3 | exon | 3441750 | 3441993 | 3441750 | ID=MS.gene072461.t1.exon3;Parent=MS.gene072461.t1 |
| chr7.3 | CDS | 3441750 | 3441993 | 3441750 | ID=cds.MS.gene072461.t1;Parent=MS.gene072461.t1 |
| chr7.3 | exon | 3442140 | 3442393 | 3442140 | ID=MS.gene072461.t1.exon4;Parent=MS.gene072461.t1 |
| chr7.3 | CDS | 3442140 | 3442393 | 3442140 | ID=cds.MS.gene072461.t1;Parent=MS.gene072461.t1 |
| chr7.3 | exon | 3444681 | 3445094 | 3444681 | ID=MS.gene072461.t1.exon5;Parent=MS.gene072461.t1 |
| chr7.3 | CDS | 3444681 | 3445094 | 3444681 | ID=cds.MS.gene072461.t1;Parent=MS.gene072461.t1 |
| chr7.3 | exon | 3445225 | 3445343 | 3445225 | ID=MS.gene072461.t1.exon6;Parent=MS.gene072461.t1 |
| chr7.3 | CDS | 3445225 | 3445343 | 3445225 | ID=cds.MS.gene072461.t1;Parent=MS.gene072461.t1 |
| Gene Sequence |
| Protein sequence |
