Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050861.t1 | XP_003626302.1 | 98.4 | 382 | 6 | 0 | 6 | 387 | 7 | 388 | 5.20E-203 | 716.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050861.t1 | P46086 | 68.9 | 379 | 110 | 4 | 6 | 383 | 7 | 378 | 3.6e-136 | 486.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050861.t1 | Q2HTL9 | 98.4 | 382 | 6 | 0 | 6 | 387 | 7 | 388 | 3.8e-203 | 716.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050861 | MS.gene066727 | 0.94972 | 7.18E-108 | -1.69E-46 |
| MS.gene050861 | MS.gene072461 | 0.92496 | 3.50E-90 | -1.69E-46 |
| MS.gene050861 | MS.gene29326 | 0.920385 | 1.37E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050861 | MS.gene75011 | PPI |
| MS.gene24606 | MS.gene050861 | PPI |
| MS.gene029829 | MS.gene050861 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050861.t1 | MTR_7g113660 | 98.429 | 382 | 6 | 0 | 6 | 387 | 7 | 388 | 0.0 | 764 |
| MS.gene050861.t1 | MTR_7g113660 | 98.851 | 261 | 3 | 0 | 127 | 387 | 19 | 279 | 0.0 | 524 |
| MS.gene050861.t1 | MTR_2g030260 | 84.444 | 45 | 7 | 0 | 74 | 118 | 9 | 53 | 2.03e-17 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050861.t1 | AT5G27450 | 68.865 | 379 | 110 | 4 | 6 | 383 | 7 | 378 | 0.0 | 518 |
| MS.gene050861.t1 | AT5G27450 | 68.865 | 379 | 110 | 4 | 6 | 383 | 7 | 378 | 0.0 | 518 |
| MS.gene050861.t1 | AT5G27450 | 68.865 | 379 | 110 | 4 | 6 | 383 | 7 | 378 | 0.0 | 518 |
Find 95 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTCTTATTCTACTTAT+TGG | 0.098390 | 7.1:-2803095 | None:intergenic |
| AACTTGATTTGGTAAATAAA+TGG | 0.186049 | 7.1:+2803593 | MS.gene050861:CDS |
| CTTCCTTTGGGATCGGGTTT+GGG | 0.252521 | 7.1:+2803463 | MS.gene050861:CDS |
| TCTTCCTTTGGGATCGGGTT+TGG | 0.254236 | 7.1:+2803462 | MS.gene050861:CDS |
| TCAAGGTCTGCTCCAGAGTA+TGG | 0.261284 | 7.1:+2806315 | MS.gene050861:CDS |
| TATTAATTCTGATCTTCCTT+TGG | 0.266647 | 7.1:+2803450 | MS.gene050861:CDS |
| AATATACCTGAGGCTAAAAT+TGG | 0.267259 | 7.1:+2803209 | MS.gene050861:CDS |
| CAACAAGGGTGGCATTCTTT+TGG | 0.277254 | 7.1:+2803562 | MS.gene050861:CDS |
| GCTAAAATTGGACTTGCTTC+TGG | 0.281138 | 7.1:+2803221 | MS.gene050861:CDS |
| ATCGTTGAGACTTGTGTTAA+AGG | 0.299741 | 7.1:+2803049 | MS.gene050861:CDS |
| ATTAATTCTGATCTTCCTTT+GGG | 0.302065 | 7.1:+2803451 | MS.gene050861:CDS |
| CAATGTTTCACTGCCGGAAT+TGG | 0.324178 | 7.1:+2806638 | MS.gene050861:CDS |
| TGGAGAGAAGGAACTTGATT+TGG | 0.330091 | 7.1:+2803582 | MS.gene050861:CDS |
| TGGTTATATTCTTCTATTCA+AGG | 0.336903 | 7.1:+2803260 | MS.gene050861:CDS |
| AGAGAAGGTAGAAGAGCTAA+TGG | 0.345464 | 7.1:+2806285 | MS.gene050861:CDS |
| GATAACAAAGAAACAGATTC+AGG | 0.360230 | 7.1:-2803122 | None:intergenic |
| TCTGATCTTCCTTTGGGATC+GGG | 0.381978 | 7.1:+2803457 | MS.gene050861:CDS |
| TGATAAAGTGATTGCTGAAC+TGG | 0.386649 | 7.1:+2806601 | MS.gene050861:CDS |
| TTCTGATCTTCCTTTGGGAT+CGG | 0.387010 | 7.1:+2803456 | MS.gene050861:CDS |
| ACTTGATTTGGTAAATAAAT+GGG | 0.390031 | 7.1:+2803594 | MS.gene050861:CDS |
| AAGTTGACAGGAGCTGGTGG+TGG | 0.392697 | 7.1:+2806400 | MS.gene050861:CDS |
| GACAACACAGTTAGTTCATA+TGG | 0.397884 | 7.1:+2803661 | MS.gene050861:CDS |
| AACACAAAAGCCATGGCATC+CGG | 0.399291 | 7.1:-2806178 | None:intergenic |
| CGCGGCATTCTGTGTGGCAC+TGG | 0.408652 | 7.1:+2803492 | MS.gene050861:CDS |
| AACACCATTCCCACCAATTC+CGG | 0.409209 | 7.1:-2806651 | None:intergenic |
| CACTCAACAGAACATGAATT+AGG | 0.425612 | 7.1:-2803152 | None:intergenic |
| ACTAACTGTGTTGTCAATTC+CGG | 0.449491 | 7.1:-2803653 | None:intergenic |
| GCTCATCCGGTGTAGGTGAC+TGG | 0.461654 | 7.1:-2806243 | None:intergenic |
| AACATAATCAGCTTCAAGTC+TGG | 0.462867 | 7.1:+2806040 | MS.gene050861:CDS |
| TTGACAGGAGCTGGTGGTGG+GGG | 0.464564 | 7.1:+2806403 | MS.gene050861:CDS |
| TGTTTCACTGCCGGAATTGG+TGG | 0.467722 | 7.1:+2806641 | MS.gene050861:CDS |
| ATCATTCATGGAAAGCCATC+CGG | 0.472952 | 7.1:+2803634 | MS.gene050861:CDS |
| GAGGTTAAAGCCAGGGCTCC+CGG | 0.477265 | 7.1:+2802803 | MS.gene050861:intron |
| GAATTAATAACCACAGTAGC+AGG | 0.495249 | 7.1:-2803436 | None:intergenic |
| TCTTCTAAGTTGACAGGAGC+TGG | 0.495981 | 7.1:+2806394 | MS.gene050861:CDS |
| TTGCTGAACTGGAGTCAAAC+GGG | 0.497231 | 7.1:+2806612 | MS.gene050861:CDS |
| CAAGGTCTGCTCCAGAGTAT+GGG | 0.502791 | 7.1:+2806316 | MS.gene050861:CDS |
| GGGGAACACGCCGTTGTTCA+CGG | 0.502857 | 7.1:+2802842 | MS.gene050861:CDS |
| GGTTATATTCTTCTATTCAA+GGG | 0.504785 | 7.1:+2803261 | MS.gene050861:CDS |
| AGTTGACAGGAGCTGGTGGT+GGG | 0.505018 | 7.1:+2806401 | MS.gene050861:CDS |
| ATTGCTGAACTGGAGTCAAA+CGG | 0.508713 | 7.1:+2806611 | MS.gene050861:CDS |
| AAACTATCTTCTAAGTTGAC+AGG | 0.511442 | 7.1:+2806388 | MS.gene050861:CDS |
| GAGACTTGTGTTAAAGGATA+CGG | 0.515191 | 7.1:+2803055 | MS.gene050861:CDS |
| TGAGAGAATGCTGAGGCACC+CGG | 0.517407 | 7.1:+2806159 | MS.gene050861:CDS |
| TGTGTTAAAGGATACGGCAT+TGG | 0.519070 | 7.1:+2803061 | MS.gene050861:CDS |
| GTAGTAACAGAGAGCTCATC+CGG | 0.519204 | 7.1:-2806256 | None:intergenic |
| GTGAACAACGGCGTGTTCCC+CGG | 0.523186 | 7.1:-2802840 | None:intergenic |
| GCTGAGGCACCCGGATGCCA+TGG | 0.525360 | 7.1:+2806168 | MS.gene050861:CDS |
| GGGTTCCAATGTTTCACTGC+CGG | 0.531775 | 7.1:+2806632 | MS.gene050861:CDS |
| AACACAAAAGCATTGGTGGC+TGG | 0.533344 | 7.1:+2806130 | MS.gene050861:CDS |
| CAATTCCGGCAGTGAAACAT+TGG | 0.536185 | 7.1:-2806637 | None:intergenic |
| GAGCTAATGGAAATGAATCA+AGG | 0.537369 | 7.1:+2806298 | MS.gene050861:CDS |
| GTTTCTACCTACTCTCGTGT+TGG | 0.538490 | 7.1:-2806110 | None:intergenic |
| GTTGACAGGAGCTGGTGGTG+GGG | 0.540263 | 7.1:+2806402 | MS.gene050861:CDS |
| TAGAAACACAAAAGCATTGG+TGG | 0.548306 | 7.1:+2806126 | MS.gene050861:CDS |
| TCGAAGAACAGTTTCTATTG+TGG | 0.554326 | 7.1:-2806350 | None:intergenic |
| GAGAGTACCAGAAGAAGGAG+TGG | 0.555723 | 7.1:-2802921 | None:intergenic |
| TAGATTCAAGCCTGCTACTG+TGG | 0.557032 | 7.1:+2803426 | MS.gene050861:intron |
| AGGGAGAGAGTACCAGAAGA+AGG | 0.558485 | 7.1:-2802926 | None:intergenic |
| AAGGTCTGCTCCAGAGTATG+GGG | 0.559637 | 7.1:+2806317 | MS.gene050861:CDS |
| TGTTACTGATTCTGTTTCTG+TGG | 0.559785 | 7.1:+2803531 | MS.gene050861:CDS |
| ACTGCCGGAATTGGTGGGAA+TGG | 0.562498 | 7.1:+2806647 | MS.gene050861:CDS |
| ATCGGGTTTGGGTTCATCCG+CGG | 0.562556 | 7.1:+2803474 | MS.gene050861:CDS |
| ACACAAAAGCCATGGCATCC+GGG | 0.565975 | 7.1:-2806177 | None:intergenic |
| TGTTACTACGTTAGAAGAGA+AGG | 0.578030 | 7.1:+2806270 | MS.gene050861:CDS |
| GTTTCACTGCCGGAATTGGT+GGG | 0.590532 | 7.1:+2806642 | MS.gene050861:CDS |
| AGGTAGAAACACAAAAGCAT+TGG | 0.593702 | 7.1:+2806123 | MS.gene050861:CDS |
| ATTAAGGTCTTCAACTAAAG+CGG | 0.596799 | 7.1:-2803189 | None:intergenic |
| ATCACTTTATCAACAACTGT+GGG | 0.598264 | 7.1:-2806590 | None:intergenic |
| GGCATTCTGTGTGGCACTGG+CGG | 0.602276 | 7.1:+2803495 | MS.gene050861:CDS |
| AGAATATAACCAAAGAAAAG+CGG | 0.602328 | 7.1:-2803249 | None:intergenic |
| ACAGAGAGCTCATCCGGTGT+AGG | 0.603559 | 7.1:-2806250 | None:intergenic |
| CAGAAGAAGGAGTGGAAAAG+CGG | 0.605331 | 7.1:-2802913 | None:intergenic |
| CGTTCTCCAGTCACCTACAC+CGG | 0.610987 | 7.1:+2806237 | MS.gene050861:CDS |
| CTCATTACCAACACGAGAGT+AGG | 0.619693 | 7.1:+2806103 | MS.gene050861:CDS |
| CTGTGGATGTGATGCAACAA+GGG | 0.621460 | 7.1:+2803548 | MS.gene050861:CDS |
| TCTAAGTTGACAGGAGCTGG+TGG | 0.621573 | 7.1:+2806397 | MS.gene050861:CDS |
| CGGTGTAGGTGACTGGAGAA+CGG | 0.623737 | 7.1:-2806236 | None:intergenic |
| ATACGGCATTGGAATTCGAA+TGG | 0.626561 | 7.1:+2803072 | MS.gene050861:CDS |
| AGCAGTAAACACAAAAGCCA+TGG | 0.628486 | 7.1:-2806185 | None:intergenic |
| GGCGGTTGATCCGTGAACAA+CGG | 0.630354 | 7.1:-2802852 | None:intergenic |
| AATCACTTTATCAACAACTG+TGG | 0.633979 | 7.1:-2806591 | None:intergenic |
| TAAGTCAATAGAAGAAGCAA+CGG | 0.636222 | 7.1:-2802873 | None:intergenic |
| TCAAGTCTGGTAACTTGACA+CGG | 0.638234 | 7.1:+2806053 | MS.gene050861:CDS |
| TCTGTGGATGTGATGCAACA+AGG | 0.639120 | 7.1:+2803547 | MS.gene050861:CDS |
| TTCATCCGCGGCATTCTGTG+TGG | 0.639325 | 7.1:+2803486 | MS.gene050861:CDS |
| ACTGTGTTGTCAATTCCGGA+TGG | 0.645767 | 7.1:-2803649 | None:intergenic |
| GAACCCAAACCCGATCCCAA+AGG | 0.654625 | 7.1:-2803466 | None:intergenic |
| GTCAATAGAAGAAGCAACGG+CGG | 0.668901 | 7.1:-2802870 | None:intergenic |
| CAGTGCCACACAGAATGCCG+CGG | 0.676093 | 7.1:-2803491 | None:intergenic |
| TGAAGACCTTAATATACCTG+AGG | 0.686497 | 7.1:+2803199 | MS.gene050861:CDS |
| GGAAAAGCGGAGAGAAACGT+AGG | 0.687796 | 7.1:-2802900 | None:intergenic |
| GTGTTTCTGAGAGAATGCTG+AGG | 0.704427 | 7.1:+2806152 | MS.gene050861:CDS |
| TGGATGTGATGCAACAAGGG+TGG | 0.717984 | 7.1:+2803551 | MS.gene050861:CDS |
| AGGTCTGCTCCAGAGTATGG+GGG | 0.723783 | 7.1:+2806318 | MS.gene050861:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATATATATAATTTTAT+TGG | - | chr7.1:2805151-2805170 | None:intergenic | 0.0% |
| !!! | TAAAATATATATAATTTTAT+TGG | - | chr7.1:2805099-2805118 | None:intergenic | 0.0% |
| !! | TTTAGTATTAAATTTATTAG+TGG | - | chr7.1:2804389-2804408 | None:intergenic | 10.0% |
| !! | AGGATTTAATTAATTTAACT+GGG | + | chr7.1:2802997-2803016 | MS.gene050861:intron | 15.0% |
| !! | ATTCGTAATATGAAATAAAA+GGG | + | chr7.1:2804472-2804491 | MS.gene050861:intron | 15.0% |
| !! | TATCTTAACATTTACATATT+TGG | + | chr7.1:2803762-2803781 | MS.gene050861:intron | 15.0% |
| !! | TATTCGTAATATGAAATAAA+AGG | + | chr7.1:2804471-2804490 | MS.gene050861:intron | 15.0% |
| !!! | AAAATTTCATATTCTTTTGT+TGG | + | chr7.1:2803692-2803711 | MS.gene050861:intron | 15.0% |
| !!! | AAATAATGATTTTAGTTACT+TGG | - | chr7.1:2804214-2804233 | None:intergenic | 15.0% |
| !!! | ATTTCTGTATTTTTACAAAA+CGG | + | chr7.1:2804824-2804843 | MS.gene050861:intron | 15.0% |
| !!! | GTCTCAATATATAATTTTAT+TGG | - | chr7.1:2805030-2805049 | None:intergenic | 15.0% |
| !!! | TTTTTAACCTAATATCAATT+TGG | + | chr7.1:2805755-2805774 | MS.gene050861:intron | 15.0% |
| !! | CATTAATCATATATCATTAG+AGG | + | chr7.1:2802977-2802996 | MS.gene050861:intron | 20.0% |
| !! | GAGGATTTAATTAATTTAAC+TGG | + | chr7.1:2802996-2803015 | MS.gene050861:intron | 20.0% |
| !! | TAATCAATCATTTCAATCAA+TGG | + | chr7.1:2802781-2802800 | MS.gene050861:intron | 20.0% |
| !! | TATATATTGAGACTTTGATT+TGG | + | chr7.1:2805037-2805056 | MS.gene050861:intron | 20.0% |
| !! | TCAAGAAACTCAAATTAAAT+TGG | - | chr7.1:2805801-2805820 | None:intergenic | 20.0% |
| !!! | AACTTGATTTGGTAAATAAA+TGG | + | chr7.1:2803593-2803612 | MS.gene050861:CDS | 20.0% |
| !!! | ACTTGATTTGGTAAATAAAT+GGG | + | chr7.1:2803594-2803613 | MS.gene050861:CDS | 20.0% |
| !!! | ATATTTCGATTTTGAAATCA+AGG | + | chr7.1:2804774-2804793 | MS.gene050861:intron | 20.0% |
| !!! | GAAATTTTGAGTAATGTTTA+AGG | - | chr7.1:2804445-2804464 | None:intergenic | 20.0% |
| !!! | GTTTGAGTTTTTATCAAAAT+CGG | + | chr7.1:2805263-2805282 | MS.gene050861:intron | 20.0% |
| !!! | TATTTCGATTTTGAAATCAA+GGG | + | chr7.1:2804775-2804794 | MS.gene050861:intron | 20.0% |
| !!! | TTTCTGTATTTTTACAAAAC+GGG | + | chr7.1:2804825-2804844 | MS.gene050861:intron | 20.0% |
| !!! | TTTGAGTTTTTATCAAAATC+GGG | + | chr7.1:2805264-2805283 | MS.gene050861:intron | 20.0% |
| !!! | TTTTCAATAATGACCATTAT+CGG | + | chr7.1:2802701-2802720 | MS.gene050861:intron | 20.0% |
| ! | AGAATAAACACCAAAAAGTT+TGG | + | chr7.1:2805440-2805459 | MS.gene050861:intron | 25.0% |
| ! | AGAATATAACCAAAGAAAAG+CGG | - | chr7.1:2803252-2803271 | None:intergenic | 25.0% |
| ! | AGTAGAGGAATTACAATTTA+AGG | + | chr7.1:2804892-2804911 | MS.gene050861:intron | 25.0% |
| ! | ATGATTAATGAGAAGATTAG+AGG | - | chr7.1:2802967-2802986 | None:intergenic | 25.0% |
| ! | ATGTAAATGTTAAGATAGCA+TGG | - | chr7.1:2803759-2803778 | None:intergenic | 25.0% |
| ! | ATTAATTCTGATCTTCCTTT+GGG | + | chr7.1:2803451-2803470 | MS.gene050861:CDS | 25.0% |
| ! | GAATAAACACCAAAAAGTTT+GGG | + | chr7.1:2805441-2805460 | MS.gene050861:intron | 25.0% |
| ! | GCATTAGAAACATACATTAA+TGG | - | chr7.1:2805727-2805746 | None:intergenic | 25.0% |
| ! | GGTTATATTCTTCTATTCAA+GGG | + | chr7.1:2803261-2803280 | MS.gene050861:CDS | 25.0% |
| ! | GTAGAGGAATTACAATTTAA+GGG | + | chr7.1:2804893-2804912 | MS.gene050861:intron | 25.0% |
| ! | TAACCTAATATCAATTTGGT+AGG | + | chr7.1:2805759-2805778 | MS.gene050861:intron | 25.0% |
| ! | TATTAATTCTGATCTTCCTT+TGG | + | chr7.1:2803450-2803469 | MS.gene050861:CDS | 25.0% |
| ! | TGATTAATGAGAAGATTAGA+GGG | - | chr7.1:2802966-2802985 | None:intergenic | 25.0% |
| ! | TGGTTATATTCTTCTATTCA+AGG | + | chr7.1:2803260-2803279 | MS.gene050861:CDS | 25.0% |
| ! | TTCAATGAATAGTTTGATCT+TGG | + | chr7.1:2804235-2804254 | MS.gene050861:intron | 25.0% |
| ! | TTGCTATATATGATATATCC+AGG | - | chr7.1:2805541-2805560 | None:intergenic | 25.0% |
| !! | ATTACTAATGGTTATTGGTT+TGG | + | chr7.1:2805480-2805499 | MS.gene050861:intron | 25.0% |
| !! | ATTTGGTACAACTTTTGTAA+TGG | + | chr7.1:2804262-2804281 | MS.gene050861:intron | 25.0% |
| !! | GTTATCGTTTTACTATTGAT+AGG | + | chr7.1:2804543-2804562 | MS.gene050861:intron | 25.0% |
| !! | TTCTTTGTTCATGAAGATTT+TGG | - | chr7.1:2804172-2804191 | None:intergenic | 25.0% |
| !! | TTTGGTACAACTTTTGTAAT+GGG | + | chr7.1:2804263-2804282 | MS.gene050861:intron | 25.0% |
| !!! | AACTTTTTGGTGTTTATTCT+AGG | - | chr7.1:2805440-2805459 | None:intergenic | 25.0% |
| !!! | AGTTATTTTAAGTCCATATG+CGG | + | chr7.1:2805222-2805241 | MS.gene050861:intron | 25.0% |
| !!! | TGTACAAATTTTGACTCTTT+TGG | + | chr7.1:2805934-2805953 | MS.gene050861:intron | 25.0% |
| !!! | TTCTGTATTTTTACAAAACG+GGG | + | chr7.1:2804826-2804845 | MS.gene050861:intron | 25.0% |
| AATATACCTGAGGCTAAAAT+TGG | + | chr7.1:2803209-2803228 | MS.gene050861:CDS | 30.0% | |
| AATCACTTTATCAACAACTG+TGG | - | chr7.1:2806594-2806613 | None:intergenic | 30.0% | |
| ACAAGGAAAAAGAAGCAAAA+AGG | - | chr7.1:2803794-2803813 | None:intergenic | 30.0% | |
| ACCAATAACCATTAGTAATC+TGG | - | chr7.1:2805479-2805498 | None:intergenic | 30.0% | |
| ACTCAATAATTGTCATCATC+AGG | + | chr7.1:2806016-2806035 | MS.gene050861:intron | 30.0% | |
| AGAAAATCATCACTCTAGAT+AGG | + | chr7.1:2803896-2803915 | MS.gene050861:intron | 30.0% | |
| AGCAACAGAATCAAAACATA+CGG | - | chr7.1:2803397-2803416 | None:intergenic | 30.0% | |
| AGTCCTACCAAATTGATATT+AGG | - | chr7.1:2805765-2805784 | None:intergenic | 30.0% | |
| ATCACTTTATCAACAACTGT+GGG | - | chr7.1:2806593-2806612 | None:intergenic | 30.0% | |
| ATTAAGGTCTTCAACTAAAG+CGG | - | chr7.1:2803192-2803211 | None:intergenic | 30.0% | |
| ATTCAATCTGTTGTCAAAAG+CGG | - | chr7.1:2804669-2804688 | None:intergenic | 30.0% | |
| GAAAATCATCACTCTAGATA+GGG | + | chr7.1:2803897-2803916 | MS.gene050861:intron | 30.0% | |
| GATAACAAAGAAACAGATTC+AGG | - | chr7.1:2803125-2803144 | None:intergenic | 30.0% | |
| GATGATGACAATTATTGAGT+GGG | - | chr7.1:2806016-2806035 | None:intergenic | 30.0% | |
| GCTTCTCTTATTCTACTTAT+TGG | - | chr7.1:2803098-2803117 | None:intergenic | 30.0% | |
| TAAGTCAATAGAAGAAGCAA+CGG | - | chr7.1:2802876-2802895 | None:intergenic | 30.0% | |
| TACAACTTGAATCTTCTGTT+AGG | + | chr7.1:2803824-2803843 | MS.gene050861:intron | 30.0% | |
| TCAATCATTTCAATCAATGG+AGG | + | chr7.1:2802784-2802803 | MS.gene050861:intron | 30.0% | |
| ! | AAACTATCTTCTAAGTTGAC+AGG | + | chr7.1:2806388-2806407 | MS.gene050861:CDS | 30.0% |
| ! | ATTTGTTAAGATGAAGTACC+TGG | + | chr7.1:2805520-2805539 | MS.gene050861:intron | 30.0% |
| ! | GAATTTCAATGTGAGAGTAT+AGG | + | chr7.1:2803854-2803873 | MS.gene050861:intron | 30.0% |
| ! | TGAAAACGACATCGTATTTT+TGG | - | chr7.1:2802687-2802706 | None:intergenic | 30.0% |
| ! | TGATGATGACAATTATTGAG+TGG | - | chr7.1:2806017-2806036 | None:intergenic | 30.0% |
| ! | TTTTAGCCTCAGGTATATTA+AGG | - | chr7.1:2803208-2803227 | None:intergenic | 30.0% |
| !! | AGATTCAAGTTGTAATCACT+AGG | - | chr7.1:2803818-2803837 | None:intergenic | 30.0% |
| !! | ATCATTGATTTCTCCGATAA+TGG | - | chr7.1:2802717-2802736 | None:intergenic | 30.0% |
| !! | ATTGATTTGAAGTGAGATGA+AGG | - | chr7.1:2803299-2803318 | None:intergenic | 30.0% |
| !! | ATTTTAAGTCCATATGCAGT+CGG | + | chr7.1:2805113-2805132 | MS.gene050861:intron | 30.0% |
| !! | GTAAATAAATGGGCTTTTGA+GGG | + | chr7.1:2803604-2803623 | MS.gene050861:CDS | 30.0% |
| !!! | ACAAATTTTGACTCTTTTGG+AGG | + | chr7.1:2805937-2805956 | MS.gene050861:intron | 30.0% |
| !!! | GTTGGTAATGAGCATTTTAA+GGG | - | chr7.1:2806095-2806114 | None:intergenic | 30.0% |
| !!! | TGTTGGTAATGAGCATTTTA+AGG | - | chr7.1:2806096-2806115 | None:intergenic | 30.0% |
| AAAAGTCTCATTGCAGAACT+TGG | - | chr7.1:2805646-2805665 | None:intergenic | 35.0% | |
| AACATAATCAGCTTCAAGTC+TGG | + | chr7.1:2806040-2806059 | MS.gene050861:CDS | 35.0% | |
| AAGAAATACACAGTAGTGTC+TGG | + | chr7.1:2805891-2805910 | MS.gene050861:intron | 35.0% | |
| ACCTGTTAGATCTGAAGAAA+AGG | + | chr7.1:2804701-2804720 | MS.gene050861:intron | 35.0% | |
| ACTAACTGTGTTGTCAATTC+CGG | - | chr7.1:2803656-2803675 | None:intergenic | 35.0% | |
| AGAAAAGGTTATGTCTTGAG+AGG | + | chr7.1:2804716-2804735 | MS.gene050861:intron | 35.0% | |
| AGTTGTAATCACTAGGAACA+AGG | - | chr7.1:2803811-2803830 | None:intergenic | 35.0% | |
| AGTTTGATCTTGGACAGATT+TGG | + | chr7.1:2804245-2804264 | MS.gene050861:intron | 35.0% | |
| ATCGTTGAGACTTGTGTTAA+AGG | + | chr7.1:2803049-2803068 | MS.gene050861:CDS | 35.0% | |
| ATGAGAAGATTAGAGGGAAA+AGG | - | chr7.1:2802960-2802979 | None:intergenic | 35.0% | |
| CACTCAACAGAACATGAATT+AGG | - | chr7.1:2803155-2803174 | None:intergenic | 35.0% | |
| GAATTAATAACCACAGTAGC+AGG | - | chr7.1:2803439-2803458 | None:intergenic | 35.0% | |
| GACAACACAGTTAGTTCATA+TGG | + | chr7.1:2803661-2803680 | MS.gene050861:CDS | 35.0% | |
| GAGACTTGTGTTAAAGGATA+CGG | + | chr7.1:2803055-2803074 | MS.gene050861:CDS | 35.0% | |
| GAGCTAATGGAAATGAATCA+AGG | + | chr7.1:2806298-2806317 | MS.gene050861:CDS | 35.0% | |
| GAGGGTGAAAAAATCATTCA+TGG | + | chr7.1:2803622-2803641 | MS.gene050861:CDS | 35.0% | |
| GCCAGATTACTAATGGTTAT+TGG | + | chr7.1:2805475-2805494 | MS.gene050861:intron | 35.0% | |
| GTATGATGCCAGATTACTAA+TGG | + | chr7.1:2805468-2805487 | MS.gene050861:intron | 35.0% | |
| TAAGTAGAAAGCGGTTAAAG+CGG | - | chr7.1:2804570-2804589 | None:intergenic | 35.0% | |
| TCGAAGAACAGTTTCTATTG+TGG | - | chr7.1:2806353-2806372 | None:intergenic | 35.0% | |
| TCTTGATTCTGTTGTCAATG+CGG | + | chr7.1:2804289-2804308 | MS.gene050861:intron | 35.0% | |
| TGAAGACCTTAATATACCTG+AGG | + | chr7.1:2803199-2803218 | MS.gene050861:CDS | 35.0% | |
| TGATAAAGTGATTGCTGAAC+TGG | + | chr7.1:2806601-2806620 | MS.gene050861:CDS | 35.0% | |
| TGTTACTACGTTAGAAGAGA+AGG | + | chr7.1:2806270-2806289 | MS.gene050861:CDS | 35.0% | |
| TTGCATTTCAAATATTCGCG+CGG | + | chr7.1:2803345-2803364 | MS.gene050861:intron | 35.0% | |
| ! | ACCTTTTCTTCAGATCTAAC+AGG | - | chr7.1:2804705-2804724 | None:intergenic | 35.0% |
| ! | AGGTAGAAACACAAAAGCAT+TGG | + | chr7.1:2806123-2806142 | MS.gene050861:CDS | 35.0% |
| ! | CATACAGATCCCAAACTTTT+TGG | - | chr7.1:2805453-2805472 | None:intergenic | 35.0% |
| ! | TAGGGTTTGAGACTTTGATT+TGG | + | chr7.1:2804968-2804987 | MS.gene050861:intron | 35.0% |
| ! | TTTTGTCTCTTTTCTTGACG+AGG | + | chr7.1:2805662-2805681 | MS.gene050861:intron | 35.0% |
| !! | GGTAAATAAATGGGCTTTTG+AGG | + | chr7.1:2803603-2803622 | MS.gene050861:CDS | 35.0% |
| !! | GTATTTTTACAAAACGGGGT+GGG | + | chr7.1:2804830-2804849 | MS.gene050861:intron | 35.0% |
| !! | GTTATTGGTTTGGATCACTA+AGG | + | chr7.1:2805490-2805509 | MS.gene050861:intron | 35.0% |
| !! | TAGAAACACAAAAGCATTGG+TGG | + | chr7.1:2806126-2806145 | MS.gene050861:CDS | 35.0% |
| !! | TGTATTTTTACAAAACGGGG+TGG | + | chr7.1:2804829-2804848 | MS.gene050861:intron | 35.0% |
| !! | TGTTACTGATTCTGTTTCTG+TGG | + | chr7.1:2803531-2803550 | MS.gene050861:CDS | 35.0% |
| !! | TTTTAAGTCCATATGCAGTC+GGG | + | chr7.1:2805114-2805133 | MS.gene050861:intron | 35.0% |
| !!! | AAACGACATCGTATTTTTGG+TGG | - | chr7.1:2802684-2802703 | None:intergenic | 35.0% |
| AAAACATGCCTCCGTTTCTA+CGG | + | chr7.1:2805366-2805385 | MS.gene050861:intron | 40.0% | |
| AAAGGTTATGTCTTGAGAGG+CGG | + | chr7.1:2804719-2804738 | MS.gene050861:intron | 40.0% | |
| AATACTGATCGGTTGAGAGA+AGG | + | chr7.1:2804861-2804880 | MS.gene050861:intron | 40.0% | |
| AATCAATGGAGGTTAAAGCC+AGG | + | chr7.1:2802795-2802814 | MS.gene050861:intron | 40.0% | |
| AGAGAAGGTAGAAGAGCTAA+TGG | + | chr7.1:2806285-2806304 | MS.gene050861:CDS | 40.0% | |
| AGCAGTAAACACAAAAGCCA+TGG | - | chr7.1:2806188-2806207 | None:intergenic | 40.0% | |
| AGGGGGATTAGAGAAATCTA+GGG | + | chr7.1:2804950-2804969 | MS.gene050861:intron | 40.0% | |
| AGTGAAGAGGACATACAAGT+TGG | - | chr7.1:2806448-2806467 | None:intergenic | 40.0% | |
| ATACTGATCGGTTGAGAGAA+GGG | + | chr7.1:2804862-2804881 | MS.gene050861:intron | 40.0% | |
| ATCAATGGAGGTTAAAGCCA+GGG | + | chr7.1:2802796-2802815 | MS.gene050861:intron | 40.0% | |
| ATCATTCATGGAAAGCCATC+CGG | + | chr7.1:2803634-2803653 | MS.gene050861:CDS | 40.0% | |
| ATTGCTGAACTGGAGTCAAA+CGG | + | chr7.1:2806611-2806630 | MS.gene050861:CDS | 40.0% | |
| ATTTCAAATATTCGCGCGGT+CGG | + | chr7.1:2803349-2803368 | MS.gene050861:intron | 40.0% | |
| CTGAAAATCCCAAAACGGAA+TGG | + | chr7.1:2803942-2803961 | MS.gene050861:intron | 40.0% | |
| CTGAGATGCGATTATCACTT+GGG | - | chr7.1:2804111-2804130 | None:intergenic | 40.0% | |
| GATCAAAGCATGTCAAGGAA+AGG | - | chr7.1:2806560-2806579 | None:intergenic | 40.0% | |
| GCGATGCTCAAAATCAGAAT+AGG | + | chr7.1:2805849-2805868 | MS.gene050861:intron | 40.0% | |
| GGTTGAGATATTCTCCTCTT+CGG | - | chr7.1:2803970-2803989 | None:intergenic | 40.0% | |
| TACTGAATGTGTGTTTGTGG+TGG | + | chr7.1:2804991-2805010 | MS.gene050861:intron | 40.0% | |
| TCAAGTCTGGTAACTTGACA+CGG | + | chr7.1:2806053-2806072 | MS.gene050861:CDS | 40.0% | |
| TGGAGAGAAGGAACTTGATT+TGG | + | chr7.1:2803582-2803601 | MS.gene050861:CDS | 40.0% | |
| TGTGTTAAAGGATACGGCAT+TGG | + | chr7.1:2803061-2803080 | MS.gene050861:CDS | 40.0% | |
| ! | ATACGGCATTGGAATTCGAA+TGG | + | chr7.1:2803072-2803091 | MS.gene050861:CDS | 40.0% |
| ! | GCTAAAATTGGACTTGCTTC+TGG | + | chr7.1:2803221-2803240 | MS.gene050861:CDS | 40.0% |
| ! | GTGTGTTTGTGGTGGAAATA+GGG | + | chr7.1:2804999-2805018 | MS.gene050861:intron | 40.0% |
| ! | TCTGAGATGCGATTATCACT+TGG | - | chr7.1:2804112-2804131 | None:intergenic | 40.0% |
| ! | TGGTACTGAATGTGTGTTTG+TGG | + | chr7.1:2804988-2805007 | MS.gene050861:intron | 40.0% |
| ! | TGTGTGTTTGTGGTGGAAAT+AGG | + | chr7.1:2804998-2805017 | MS.gene050861:intron | 40.0% |
| !! | TATTGAGTGGGTTGCACATT+CGG | - | chr7.1:2806004-2806023 | None:intergenic | 40.0% |
| !! | TTCTGATCTTCCTTTGGGAT+CGG | + | chr7.1:2803456-2803475 | MS.gene050861:CDS | 40.0% |
| !! | TTTTAAGTCCATATGCGGTC+AGG | + | chr7.1:2805227-2805246 | MS.gene050861:intron | 40.0% |
| AAAACGGAATGGAACCGAAG+AGG | + | chr7.1:2803953-2803972 | MS.gene050861:intron | 45.0% | |
| AAACATGCCTCCGTTTCTAC+GGG | + | chr7.1:2805367-2805386 | MS.gene050861:intron | 45.0% | |
| AACACAAAAGCCATGGCATC+CGG | - | chr7.1:2806181-2806200 | None:intergenic | 45.0% | |
| AACACCATTCCCACCAATTC+CGG | - | chr7.1:2806654-2806673 | None:intergenic | 45.0% | |
| AAGGTTATGTCTTGAGAGGC+GGG | + | chr7.1:2804720-2804739 | MS.gene050861:intron | 45.0% | |
| AATCCGATGCTACAAACGGT+CGG | - | chr7.1:2803997-2804016 | None:intergenic | 45.0% | |
| ACTGTGTTGTCAATTCCGGA+TGG | - | chr7.1:2803652-2803671 | None:intergenic | 45.0% | |
| AGAACTTGGCGAATTGGATG+AGG | - | chr7.1:2805632-2805651 | None:intergenic | 45.0% | |
| AGAGGGAAAAGGATTGAGTG+AGG | - | chr7.1:2802949-2802968 | None:intergenic | 45.0% | |
| ATTCGGAGGCAGTAACTAGT+GGG | - | chr7.1:2805987-2806006 | None:intergenic | 45.0% | |
| CAGAAGAAGGAGTGGAAAAG+CGG | - | chr7.1:2802916-2802935 | None:intergenic | 45.0% | |
| CATTGCAGAACTTGGCGAAT+TGG | - | chr7.1:2805638-2805657 | None:intergenic | 45.0% | |
| CCCGGAAAAATCATCTTAGC+CGG | + | chr7.1:2802821-2802840 | MS.gene050861:CDS | 45.0% | |
| CCGGAAAAATCATCTTAGCC+GGG | + | chr7.1:2802822-2802841 | MS.gene050861:CDS | 45.0% | |
| CGGAAAAATCATCTTAGCCG+GGG | + | chr7.1:2802823-2802842 | MS.gene050861:CDS | 45.0% | |
| CTCAACCGATCAGTATTGCA+TGG | - | chr7.1:2804858-2804877 | None:intergenic | 45.0% | |
| CTCATTACCAACACGAGAGT+AGG | + | chr7.1:2806103-2806122 | MS.gene050861:CDS | 45.0% | |
| CTCTAGATAGGGTAGAGCTT+CGG | + | chr7.1:2803908-2803927 | MS.gene050861:intron | 45.0% | |
| CTGTGGATGTGATGCAACAA+GGG | + | chr7.1:2803548-2803567 | MS.gene050861:CDS | 45.0% | |
| GAAGACGACAATGAGTGAAG+AGG | - | chr7.1:2806461-2806480 | None:intergenic | 45.0% | |
| GACCAATCCGATGCTACAAA+CGG | - | chr7.1:2804001-2804020 | None:intergenic | 45.0% | |
| GAGGGAAAAGGATTGAGTGA+GGG | - | chr7.1:2802948-2802967 | None:intergenic | 45.0% | |
| GAGGGGGATTAGAGAAATCT+AGG | + | chr7.1:2804949-2804968 | MS.gene050861:intron | 45.0% | |
| GTAGTAACAGAGAGCTCATC+CGG | - | chr7.1:2806259-2806278 | None:intergenic | 45.0% | |
| GTCAATAGAAGAAGCAACGG+CGG | - | chr7.1:2802873-2802892 | None:intergenic | 45.0% | |
| GTTTCTACCTACTCTCGTGT+TGG | - | chr7.1:2806113-2806132 | None:intergenic | 45.0% | |
| TAGATTCAAGCCTGCTACTG+TGG | + | chr7.1:2803426-2803445 | MS.gene050861:intron | 45.0% | |
| TCGGGCTGAAAATCCCAAAA+CGG | + | chr7.1:2803937-2803956 | MS.gene050861:intron | 45.0% | |
| TCTGTGGATGTGATGCAACA+AGG | + | chr7.1:2803547-2803566 | MS.gene050861:CDS | 45.0% | |
| TTCAACTGTATGCACCTACC+TGG | + | chr7.1:2805287-2805306 | MS.gene050861:intron | 45.0% | |
| TTGCTGAACTGGAGTCAAAC+GGG | + | chr7.1:2806612-2806631 | MS.gene050861:CDS | 45.0% | |
| TTTCAAATATTCGCGCGGTC+GGG | + | chr7.1:2803350-2803369 | MS.gene050861:intron | 45.0% | |
| ! | CAACAAGGGTGGCATTCTTT+TGG | + | chr7.1:2803562-2803581 | MS.gene050861:CDS | 45.0% |
| ! | CCCGGCTAAGATGATTTTTC+CGG | - | chr7.1:2802825-2802844 | None:intergenic | 45.0% |
| ! | CCGGCTAAGATGATTTTTCC+GGG | - | chr7.1:2802824-2802843 | None:intergenic | 45.0% |
| ! | CTTCGGTTCCATTCCGTTTT+GGG | - | chr7.1:2803953-2803972 | None:intergenic | 45.0% |
| ! | GCACTGATCAAAGCATGTCA+AGG | - | chr7.1:2806565-2806584 | None:intergenic | 45.0% |
| ! | GTGTTTCTGAGAGAATGCTG+AGG | + | chr7.1:2806152-2806171 | MS.gene050861:CDS | 45.0% |
| ! | GTTGACCACATCTAGAGTCA+GGG | - | chr7.1:2805418-2805437 | None:intergenic | 45.0% |
| ! | TCTTCGGTTCCATTCCGTTT+TGG | - | chr7.1:2803954-2803973 | None:intergenic | 45.0% |
| ! | TCTTCTAAGTTGACAGGAGC+TGG | + | chr7.1:2806394-2806413 | MS.gene050861:CDS | 45.0% |
| ! | TTCGGTTGAGCAGTTTTGCA+CGG | + | chr7.1:2804034-2804053 | MS.gene050861:intron | 45.0% |
| ! | TTGAGATGAGAGCACGAAGA+GGG | + | chr7.1:2804931-2804950 | MS.gene050861:intron | 45.0% |
| ! | TTTGAGATGAGAGCACGAAG+AGG | + | chr7.1:2804930-2804949 | MS.gene050861:intron | 45.0% |
| !! | AACACAAAAGCATTGGTGGC+TGG | + | chr7.1:2806130-2806149 | MS.gene050861:CDS | 45.0% |
| !! | GCAAGTCCAATTTTAGCCTC+AGG | - | chr7.1:2803218-2803237 | None:intergenic | 45.0% |
| !! | GTGGCATTCTTTTGGAGAGA+AGG | + | chr7.1:2803570-2803589 | MS.gene050861:CDS | 45.0% |
| !! | GTTTGTAGCATCGGATTGGT+CGG | + | chr7.1:2804000-2804019 | MS.gene050861:intron | 45.0% |
| !! | TCTGATCTTCCTTTGGGATC+GGG | + | chr7.1:2803457-2803476 | MS.gene050861:CDS | 45.0% |
| !! | TTTGTAGCATCGGATTGGTC+GGG | + | chr7.1:2804001-2804020 | MS.gene050861:intron | 45.0% |
| !!! | TATTTTTTTTTTTAATAGTA+TGG | - | chr7.1:2804414-2804433 | None:intergenic | 5.0% |
| AACCAAACCCGTAGAAACGG+AGG | - | chr7.1:2805377-2805396 | None:intergenic | 50.0% | |
| AAGGTCTGCTCCAGAGTATG+GGG | + | chr7.1:2806317-2806336 | MS.gene050861:CDS | 50.0% | |
| ACACAAAAGCCATGGCATCC+GGG | - | chr7.1:2806180-2806199 | None:intergenic | 50.0% | |
| ACCCAAAAATTAGCGCGTCG+CGG | + | chr7.1:2804325-2804344 | MS.gene050861:intron | 50.0% | |
| AGATAGGGTAGAGCTTCGGT+CGG | + | chr7.1:2803912-2803931 | MS.gene050861:intron | 50.0% | |
| AGTCCATATGCAGTCGGGTT+CGG | + | chr7.1:2805119-2805138 | MS.gene050861:intron | 50.0% | |
| AGTCCATATGCGGTCAGGTT+CGG | + | chr7.1:2805232-2805251 | MS.gene050861:intron | 50.0% | |
| ATCCGATGCTACAAACGGTC+GGG | - | chr7.1:2803996-2804015 | None:intergenic | 50.0% | |
| ATGCTACAAACGGTCGGGAA+TGG | - | chr7.1:2803991-2804010 | None:intergenic | 50.0% | |
| ATTCTGTTGTCAATGCGGCG+CGG | + | chr7.1:2804294-2804313 | MS.gene050861:intron | 50.0% | |
| CAAGGTCTGCTCCAGAGTAT+GGG | + | chr7.1:2806316-2806335 | MS.gene050861:CDS | 50.0% | |
| CATTCGGAGGCAGTAACTAG+TGG | - | chr7.1:2805988-2806007 | None:intergenic | 50.0% | |
| CCCAACCAAACCCGTAGAAA+CGG | - | chr7.1:2805380-2805399 | None:intergenic | 50.0% | |
| CGCGTGGCATAAGTAGAAAG+CGG | - | chr7.1:2804579-2804598 | None:intergenic | 50.0% | |
| GAGAAGGGATGACAGAGTAG+AGG | + | chr7.1:2804877-2804896 | MS.gene050861:intron | 50.0% | |
| GGAAAAGCGGAGAGAAACGT+AGG | - | chr7.1:2802903-2802922 | None:intergenic | 50.0% | |
| GGCGGGTGATGAAACAGAAT+CGG | + | chr7.1:2804737-2804756 | MS.gene050861:intron | 50.0% | |
| TCAAGGTCTGCTCCAGAGTA+TGG | + | chr7.1:2806315-2806334 | MS.gene050861:CDS | 50.0% | |
| TGGATGTGATGCAACAAGGG+TGG | + | chr7.1:2803551-2803570 | MS.gene050861:CDS | 50.0% | |
| TTCCCGACCGTTTGTAGCAT+CGG | + | chr7.1:2803991-2804010 | MS.gene050861:intron | 50.0% | |
| ! | CAGAGCGTAGCGGAAAAATC+AGG | - | chr7.1:2804625-2804644 | None:intergenic | 50.0% |
| ! | CCGTTTCTACGGGTTTGGTT+GGG | + | chr7.1:2805377-2805396 | MS.gene050861:intron | 50.0% |
| ! | CGCTTTTCCACTCCTTCTTC+TGG | + | chr7.1:2802914-2802933 | MS.gene050861:CDS | 50.0% |
| ! | GACCGTTTGTAGCATCGGAT+TGG | + | chr7.1:2803996-2804015 | MS.gene050861:intron | 50.0% |
| ! | GAGCAGTTTTGCACGGTTGA+AGG | + | chr7.1:2804041-2804060 | MS.gene050861:intron | 50.0% |
| ! | GGGTGCCATGCAATACTGAT+CGG | + | chr7.1:2804850-2804869 | MS.gene050861:intron | 50.0% |
| ! | GGTTGACCACATCTAGAGTC+AGG | - | chr7.1:2805419-2805438 | None:intergenic | 50.0% |
| ! | TCCGTTTCTACGGGTTTGGT+TGG | + | chr7.1:2805376-2805395 | MS.gene050861:intron | 50.0% |
| ! | TCTAAGTTGACAGGAGCTGG+TGG | + | chr7.1:2806397-2806416 | MS.gene050861:CDS | 50.0% |
| ! | TGAGATGAGAGCACGAAGAG+GGG | + | chr7.1:2804932-2804951 | MS.gene050861:intron | 50.0% |
| !! | AGGGAGAGAGTACCAGAAGA+AGG | - | chr7.1:2802929-2802948 | None:intergenic | 50.0% |
| !! | CTTCCTTTGGGATCGGGTTT+GGG | + | chr7.1:2803463-2803482 | MS.gene050861:CDS | 50.0% |
| !! | GAGAGTACCAGAAGAAGGAG+TGG | - | chr7.1:2802924-2802943 | None:intergenic | 50.0% |
| !! | TCTTCCTTTGGGATCGGGTT+TGG | + | chr7.1:2803462-2803481 | MS.gene050861:CDS | 50.0% |
| !!! | CGACGCGCTAATTTTTGGGT+TGG | - | chr7.1:2804325-2804344 | None:intergenic | 50.0% |
| !!! | CTGGTGTTGCCGCTTTTCTT+TGG | + | chr7.1:2803240-2803259 | MS.gene050861:CDS | 50.0% |
| AAGTTGACAGGAGCTGGTGG+TGG | + | chr7.1:2806400-2806419 | MS.gene050861:CDS | 55.0% | |
| ACAGAGAGCTCATCCGGTGT+AGG | - | chr7.1:2806253-2806272 | None:intergenic | 55.0% | |
| ACTGCCGGAATTGGTGGGAA+TGG | + | chr7.1:2806647-2806666 | MS.gene050861:CDS | 55.0% | |
| AGGTCTGCTCCAGAGTATGG+GGG | + | chr7.1:2806318-2806337 | MS.gene050861:CDS | 55.0% | |
| AGGTGAGCATAGTCAGGTCC+AGG | - | chr7.1:2805308-2805327 | None:intergenic | 55.0% | |
| AGTTGACAGGAGCTGGTGGT+GGG | + | chr7.1:2806401-2806420 | MS.gene050861:CDS | 55.0% | |
| CATGACTGACCCCCATACTC+TGG | - | chr7.1:2806330-2806349 | None:intergenic | 55.0% | |
| CCCAAAAATTAGCGCGTCGC+GGG | + | chr7.1:2804326-2804345 | MS.gene050861:intron | 55.0% | |
| CGGTGTAGGTGACTGGAGAA+CGG | - | chr7.1:2806239-2806258 | None:intergenic | 55.0% | |
| CGTTCTCCAGTCACCTACAC+CGG | + | chr7.1:2806237-2806256 | MS.gene050861:CDS | 55.0% | |
| CTCAGCCCTGACTCTAGATG+TGG | + | chr7.1:2805410-2805429 | MS.gene050861:intron | 55.0% | |
| CTGGGTGGAGACGATTTGAG+CGG | - | chr7.1:2805337-2805356 | None:intergenic | 55.0% | |
| GAACCCAAACCCGATCCCAA+AGG | - | chr7.1:2803469-2803488 | None:intergenic | 55.0% | |
| GACCTGACTATGCTCACCTG+AGG | + | chr7.1:2805309-2805328 | MS.gene050861:intron | 55.0% | |
| GAGCATAGTCAGGTCCAGGT+AGG | - | chr7.1:2805304-2805323 | None:intergenic | 55.0% | |
| GAGTCAGGGCTGAGCATAAC+CGG | - | chr7.1:2805404-2805423 | None:intergenic | 55.0% | |
| GGCGGTTGATCCGTGAACAA+CGG | - | chr7.1:2802855-2802874 | None:intergenic | 55.0% | |
| GTCCTCAGGTGAGCATAGTC+AGG | - | chr7.1:2805314-2805333 | None:intergenic | 55.0% | |
| TCCGCTACGCTCTGCTATAG+CGG | + | chr7.1:2804631-2804650 | MS.gene050861:intron | 55.0% | |
| TGACCGAACCCGACTGCATA+TGG | - | chr7.1:2805125-2805144 | None:intergenic | 55.0% | |
| TGACCGAACCTGACCGCATA+TGG | - | chr7.1:2805238-2805257 | None:intergenic | 55.0% | |
| TGCCTCCGTTTCTACGGGTT+TGG | + | chr7.1:2805372-2805391 | MS.gene050861:intron | 55.0% | |
| TGGGTGGAGACGATTTGAGC+GGG | - | chr7.1:2805336-2805355 | None:intergenic | 55.0% | |
| TTCATCCGCGGCATTCTGTG+TGG | + | chr7.1:2803486-2803505 | MS.gene050861:CDS | 55.0% | |
| ! | ATCGGGTTTGGGTTCATCCG+CGG | + | chr7.1:2803474-2803493 | MS.gene050861:CDS | 55.0% |
| ! | CCCGCGACGCGCTAATTTTT+GGG | - | chr7.1:2804329-2804348 | None:intergenic | 55.0% |
| ! | GAGATGAGAGCACGAAGAGG+GGG | + | chr7.1:2804933-2804952 | MS.gene050861:intron | 55.0% |
| ! | GATGATTTTTCCGGGAGCCC+TGG | - | chr7.1:2802816-2802835 | None:intergenic | 55.0% |
| ! | GGTAGAGCTTCGGTCGGTTT+CGG | + | chr7.1:2803918-2803937 | MS.gene050861:intron | 55.0% |
| ! | GTAGAGCTTCGGTCGGTTTC+GGG | + | chr7.1:2803919-2803938 | MS.gene050861:intron | 55.0% |
| ! | TCCCGCGACGCGCTAATTTT+TGG | - | chr7.1:2804330-2804349 | None:intergenic | 55.0% |
| ! | TCTACGGGTTTGGTTGGGTC+CGG | + | chr7.1:2805382-2805401 | MS.gene050861:intron | 55.0% |
| ! | TGAGAGAATGCTGAGGCACC+CGG | + | chr7.1:2806159-2806178 | MS.gene050861:CDS | 55.0% |
| !! | CGGAGGCATGTTTTGAGCCA+CGG | - | chr7.1:2805360-2805379 | None:intergenic | 55.0% |
| !! | GCATGTTTTGAGCCACGGCT+GGG | - | chr7.1:2805355-2805374 | None:intergenic | 55.0% |
| !! | TGAGTGGGTTGCACATTCGG+AGG | - | chr7.1:2806001-2806020 | None:intergenic | 55.0% |
| !! | TTGCGTAGCGGGCGCTATTT+CGG | + | chr7.1:2804355-2804374 | MS.gene050861:intron | 55.0% |
| AAAATCAGGACCACCGCGCC+AGG | - | chr7.1:2804611-2804630 | None:intergenic | 60.0% | |
| AAATCGTCTCCACCCAGCCG+TGG | + | chr7.1:2805340-2805359 | MS.gene050861:intron | 60.0% | |
| AAATTAGCGCGTCGCGGGAG+TGG | + | chr7.1:2804331-2804350 | MS.gene050861:intron | 60.0% | |
| AATTAGCGCGTCGCGGGAGT+GGG | + | chr7.1:2804332-2804351 | MS.gene050861:intron | 60.0% | |
| ACTTATGCCACGCGCCAACG+CGG | + | chr7.1:2804585-2804604 | MS.gene050861:intron | 60.0% | |
| CAGTGCCACACAGAATGCCG+CGG | - | chr7.1:2803494-2803513 | None:intergenic | 60.0% | |
| GACGATTTGAGCGGGTCCTC+AGG | - | chr7.1:2805328-2805347 | None:intergenic | 60.0% | |
| GAGGTTAAAGCCAGGGCTCC+CGG | + | chr7.1:2802803-2802822 | MS.gene050861:intron | 60.0% | |
| GCCGCTATAGCAGAGCGTAG+CGG | - | chr7.1:2804635-2804654 | None:intergenic | 60.0% | |
| GCTACGCTCTGCTATAGCGG+CGG | + | chr7.1:2804634-2804653 | MS.gene050861:intron | 60.0% | |
| GCTCATCCGGTGTAGGTGAC+TGG | - | chr7.1:2806246-2806265 | None:intergenic | 60.0% | |
| GGGGAACACGCCGTTGTTCA+CGG | + | chr7.1:2802842-2802861 | MS.gene050861:CDS | 60.0% | |
| GTGAACAACGGCGTGTTCCC+CGG | - | chr7.1:2802843-2802862 | None:intergenic | 60.0% | |
| GTTGTCAAAAGCGGCCGCAC+CGG | - | chr7.1:2804660-2804679 | None:intergenic | 60.0% | |
| ! | GGCATTCTGTGTGGCACTGG+CGG | + | chr7.1:2803495-2803514 | MS.gene050861:CDS | 60.0% |
| ! | GTTGACAGGAGCTGGTGGTG+GGG | + | chr7.1:2806402-2806421 | MS.gene050861:CDS | 60.0% |
| ! | TGGTCGGGTGGCGGTTTGTT+CGG | + | chr7.1:2804016-2804035 | MS.gene050861:intron | 60.0% |
| !! | GGCATGTTTTGAGCCACGGC+TGG | - | chr7.1:2805356-2805375 | None:intergenic | 60.0% |
| !! | GTAGCATCGGATTGGTCGGG+TGG | + | chr7.1:2804004-2804023 | MS.gene050861:intron | 60.0% |
| !! | TGTTTTGAGCCACGGCTGGG+TGG | - | chr7.1:2805352-2805371 | None:intergenic | 60.0% |
| !! | TTGACAGGAGCTGGTGGTGG+GGG | + | chr7.1:2806403-2806422 | MS.gene050861:CDS | 60.0% |
| CGCGGCATTCTGTGTGGCAC+TGG | + | chr7.1:2803492-2803511 | MS.gene050861:CDS | 65.0% | |
| GTTGTCAATGCGGCGCGGAG+CGG | + | chr7.1:2804299-2804318 | MS.gene050861:intron | 65.0% | |
| ! | CGGGCGCTATTTCGGTGGTG+TGG | + | chr7.1:2804363-2804382 | MS.gene050861:intron | 65.0% |
| ! | GCGGTCAGGTTCGGTCAGTG+CGG | + | chr7.1:2805241-2805260 | MS.gene050861:intron | 65.0% |
| !! | CGTAGCGGGCGCTATTTCGG+TGG | + | chr7.1:2804358-2804377 | MS.gene050861:intron | 65.0% |
| !! | GCATCGGATTGGTCGGGTGG+CGG | + | chr7.1:2804007-2804026 | MS.gene050861:intron | 65.0% |
| CGCTCTGCTATAGCGGCGGC+CGG | + | chr7.1:2804638-2804657 | MS.gene050861:intron | 70.0% | |
| TGCTATAGCGGCGGCCGGTG+CGG | + | chr7.1:2804643-2804662 | MS.gene050861:intron | 70.0% | |
| ! | GCTGAGGCACCCGGATGCCA+TGG | + | chr7.1:2806168-2806187 | MS.gene050861:CDS | 70.0% |
| !! | CGCGGGAGTGGGTTGCGTAG+CGG | + | chr7.1:2804343-2804362 | MS.gene050861:intron | 70.0% |
| !! | GCGGGAGTGGGTTGCGTAGC+GGG | + | chr7.1:2804344-2804363 | MS.gene050861:intron | 70.0% |
| ! | ACCACCGCGCCAGGCCGCGT+TGG | - | chr7.1:2804602-2804621 | None:intergenic | 80.0% |
| ! | TGCCACGCGCCAACGCGGCC+TGG | + | chr7.1:2804590-2804609 | MS.gene050861:intron | 80.0% |
| ! | CGCGCCAACGCGGCCTGGCG+CGG | + | chr7.1:2804595-2804614 | MS.gene050861:intron | 85.0% |
| ! | GCCAACGCGGCCTGGCGCGG+TGG | + | chr7.1:2804598-2804617 | MS.gene050861:intron | 85.0% |
| !! | CGCCAGGCCGCGTTGGCGCG+TGG | - | chr7.1:2804595-2804614 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 2802646 | 2806700 | 2802646 | ID=MS.gene050861 |
| chr7.1 | mRNA | 2802646 | 2806700 | 2802646 | ID=MS.gene050861.t1;Parent=MS.gene050861 |
| chr7.1 | exon | 2802646 | 2802659 | 2802646 | ID=MS.gene050861.t1.exon1;Parent=MS.gene050861.t1 |
| chr7.1 | CDS | 2802646 | 2802659 | 2802646 | ID=cds.MS.gene050861.t1;Parent=MS.gene050861.t1 |
| chr7.1 | exon | 2802817 | 2802935 | 2802817 | ID=MS.gene050861.t1.exon2;Parent=MS.gene050861.t1 |
| chr7.1 | CDS | 2802817 | 2802935 | 2802817 | ID=cds.MS.gene050861.t1;Parent=MS.gene050861.t1 |
| chr7.1 | exon | 2803039 | 2803282 | 2803039 | ID=MS.gene050861.t1.exon3;Parent=MS.gene050861.t1 |
| chr7.1 | CDS | 2803039 | 2803282 | 2803039 | ID=cds.MS.gene050861.t1;Parent=MS.gene050861.t1 |
| chr7.1 | exon | 2803429 | 2803682 | 2803429 | ID=MS.gene050861.t1.exon4;Parent=MS.gene050861.t1 |
| chr7.1 | CDS | 2803429 | 2803682 | 2803429 | ID=cds.MS.gene050861.t1;Parent=MS.gene050861.t1 |
| chr7.1 | exon | 2806038 | 2806451 | 2806038 | ID=MS.gene050861.t1.exon5;Parent=MS.gene050861.t1 |
| chr7.1 | CDS | 2806038 | 2806451 | 2806038 | ID=cds.MS.gene050861.t1;Parent=MS.gene050861.t1 |
| chr7.1 | exon | 2806582 | 2806700 | 2806582 | ID=MS.gene050861.t1.exon6;Parent=MS.gene050861.t1 |
| chr7.1 | CDS | 2806582 | 2806700 | 2806582 | ID=cds.MS.gene050861.t1;Parent=MS.gene050861.t1 |
| Gene Sequence |
| Protein sequence |
