AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072834

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072834.t1 MTR_3g106220 92.868 645 10 1 1 609 1 645 0.0 1225
MS.gene072834.t1 MTR_1g013170 51.264 554 193 17 6 541 3 497 9.92e-155 454
MS.gene072834.t1 MTR_1g013180 47.030 623 196 21 6 596 154 674 1.81e-143 432
MS.gene072834.t1 MTR_2g450070 38.986 690 312 16 6 606 16 685 1.21e-130 399
MS.gene072834.t1 MTR_2g450070 46.138 492 202 8 6 447 16 494 7.70e-126 386
MS.gene072834.t1 MTR_7g117705 59.184 343 102 6 6 338 3 317 6.77e-118 358
MS.gene072834.t1 MTR_2g034960 47.619 378 160 8 6 373 27 376 1.36e-100 318
MS.gene072834.t1 MTR_1g032570 55.290 293 119 3 4 286 7 297 3.30e-98 313
MS.gene072834.t1 MTR_4g121020 57.565 271 83 3 6 263 29 280 1.47e-97 313
MS.gene072834.t1 MTR_4g121020 57.565 271 83 3 6 263 29 280 1.59e-97 312
MS.gene072834.t1 MTR_4g131580 51.642 335 143 5 2 328 11 334 1.14e-94 303
MS.gene072834.t1 MTR_4g131600 50.000 334 146 5 5 330 17 337 4.49e-93 298
MS.gene072834.t1 MTR_4g131570 51.064 329 145 4 8 328 17 337 8.70e-93 298
MS.gene072834.t1 MTR_3g086100 53.289 304 115 5 8 310 13 290 2.07e-91 293
MS.gene072834.t1 MTR_3g102590 61.011 277 48 5 1 273 1 221 3.69e-91 281
MS.gene072834.t1 MTR_8g079940 56.343 268 95 4 6 265 23 276 2.93e-89 286
MS.gene072834.t1 MTR_3g102590 59.677 248 43 3 1 247 1 192 1.32e-78 247
MS.gene072834.t1 MTR_1g032570 55.217 230 91 3 67 286 1 228 1.02e-71 241
MS.gene072834.t1 MTR_3g102600 83.459 133 22 0 1 133 1 133 1.80e-69 223
MS.gene072834.t1 MTR_3g102600 73.585 53 14 0 197 249 131 183 1.49e-20 90.1
MS.gene072834.t1 MTR_3g102600 83.459 133 22 0 1 133 1 133 4.04e-68 221
MS.gene072834.t1 MTR_3g102600 60.870 115 21 1 197 311 131 221 1.12e-39 145
MS.gene072834.t1 MTR_3g086100 51.837 245 91 5 67 310 1 219 4.30e-64 219
MS.gene072834.t1 MTR_4g021760 41.270 252 116 4 3 254 6 225 4.07e-52 181
MS.gene072834.t1 MTR_1g013160 63.399 153 50 2 70 221 1 148 5.03e-51 173
MS.gene072834.t1 MTR_4g121020 50.000 190 63 3 87 263 6 176 5.14e-49 180
MS.gene072834.t1 MTR_4g021790 39.516 248 118 3 8 255 10 225 1.06e-47 168
MS.gene072834.t1 MTR_4g021855 38.306 248 121 4 8 255 10 225 7.04e-46 164
MS.gene072834.t1 MTR_4g021845 38.750 240 115 3 8 247 10 217 8.10e-46 161
MS.gene072834.t1 MTR_3g102600 82.143 84 15 0 50 133 1 84 1.05e-42 150
MS.gene072834.t1 MTR_3g102600 73.585 53 14 0 197 249 82 134 2.35e-21 90.9
MS.gene072834.t1 MTR_0450s0040 35.510 245 133 2 12 256 8 227 1.56e-42 156
MS.gene072834.t1 MTR_3g102600 82.143 84 15 0 50 133 1 84 6.67e-41 147
MS.gene072834.t1 MTR_3g102600 60.345 116 22 1 197 312 82 173 6.51e-40 144
MS.gene072834.t1 MTR_8g105600 36.630 273 159 5 5 276 6 265 1.12e-39 153
MS.gene072834.t1 MTR_6g045327 36.078 255 129 5 1 254 7 228 3.90e-38 145
MS.gene072834.t1 MTR_7g026400 36.771 223 121 3 35 257 14 216 2.37e-36 144
MS.gene072834.t1 MTR_5g055260 34.274 248 104 8 8 255 10 198 3.85e-30 119
MS.gene072834.t1 MTR_8g032710 29.297 256 161 6 11 250 20 271 1.89e-25 110
MS.gene072834.t1 MTR_3g092780 31.677 161 98 3 12 161 56 215 4.48e-23 104
MS.gene072834.t1 MTR_3g092780 31.677 161 98 3 12 161 56 215 6.10e-23 103
MS.gene072834.t1 MTR_3g092780 37.097 124 73 2 12 131 56 178 1.11e-22 103
MS.gene072834.t1 MTR_3g092780 37.097 124 73 2 12 131 56 178 1.46e-22 102
MS.gene072834.t1 MTR_4g064730 46.667 105 53 1 164 265 94 198 4.28e-22 97.8
MS.gene072834.t1 MTR_4g023980 32.934 167 81 3 58 224 39 174 9.56e-22 93.2
MS.gene072834.t1 MTR_7g118260 35.915 142 80 3 1 134 1 139 1.87e-21 99.0
MS.gene072834.t1 MTR_6g016850 33.548 155 96 4 5 157 6 155 1.97e-21 92.0
MS.gene072834.t1 MTR_7g118260 32.039 206 115 5 1 198 1 189 2.11e-21 99.0
MS.gene072834.t1 MTR_1g067110 37.705 122 73 2 12 130 85 206 2.41e-21 99.0
MS.gene072834.t1 MTR_1g067110 37.705 122 73 2 12 130 85 206 2.43e-21 99.0
MS.gene072834.t1 MTR_4g061360 39.344 122 71 1 12 130 89 210 2.67e-21 99.0
MS.gene072834.t1 MTR_8g093040 36.923 130 82 0 1 130 7 136 3.02e-21 94.4
MS.gene072834.t1 MTR_7g089010 56.000 75 32 1 186 259 78 152 6.33e-21 94.0
MS.gene072834.t1 MTR_8g024260 34.868 152 88 2 14 162 38 181 9.39e-21 97.1
MS.gene072834.t1 MTR_6g453220 66.667 75 24 1 214 287 379 453 2.30e-20 95.1
MS.gene072834.t1 MTR_3g037390 34.677 124 78 1 12 132 24 147 1.90e-19 92.8
MS.gene072834.t1 MTR_4g108880 33.582 134 84 2 4 132 23 156 8.45e-18 87.4
MS.gene072834.t1 MTR_4g078810 50.685 73 36 0 193 265 153 225 9.60e-18 86.3
MS.gene072834.t1 MTR_2g090675 45.455 88 48 0 178 265 141 228 1.07e-17 86.3
MS.gene072834.t1 MTR_5g014040 56.061 66 29 0 191 256 304 369 1.15e-17 87.0
MS.gene072834.t1 MTR_5g014040 37.097 124 74 2 8 130 14 134 2.09e-13 73.6
MS.gene072834.t1 MTR_4g098870 60.656 61 24 0 196 256 308 368 3.37e-17 85.5
MS.gene072834.t1 MTR_4g098870 33.065 124 79 2 8 130 14 134 6.89e-12 68.6
MS.gene072834.t1 MTR_4g098870 60.656 61 24 0 196 256 328 388 4.01e-17 85.5
MS.gene072834.t1 MTR_4g098870 33.065 124 79 2 8 130 34 154 8.92e-12 68.6
MS.gene072834.t1 MTR_4g098870 60.656 61 24 0 196 256 308 368 4.18e-17 85.1
MS.gene072834.t1 MTR_4g098870 33.065 124 79 2 8 130 14 134 1.62e-11 67.4
MS.gene072834.t1 MTR_4g098870 60.656 61 24 0 196 256 328 388 4.55e-17 85.1
MS.gene072834.t1 MTR_4g098870 33.065 124 79 2 8 130 34 154 2.00e-11 67.4
MS.gene072834.t1 MTR_4g098870 60.656 61 24 0 196 256 347 407 4.58e-17 85.1
MS.gene072834.t1 MTR_4g098870 33.065 124 79 2 8 130 53 173 1.18e-11 68.2
MS.gene072834.t1 MTR_3g084390 48.101 79 31 2 1 69 1 79 8.55e-16 73.2
MS.gene072834.t1 MTR_5g014040 52.113 71 29 1 191 256 264 334 9.65e-16 80.9
MS.gene072834.t1 MTR_5g014040 52.113 71 29 1 191 256 304 374 1.12e-15 80.5
MS.gene072834.t1 MTR_5g014040 37.097 124 74 2 8 130 14 134 2.19e-13 73.6
MS.gene072834.t1 MTR_5g017980 39.516 124 64 4 197 318 192 306 6.60e-15 76.6
MS.gene072834.t1 MTR_5g017980 39.516 124 64 4 197 318 191 305 6.66e-15 76.6
MS.gene072834.t1 MTR_4g086835 38.679 106 50 2 197 298 273 367 6.39e-14 74.3
MS.gene072834.t1 MTR_5g017980 39.200 125 64 5 197 318 192 307 6.54e-14 73.6
MS.gene072834.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 1.24e-13 72.4
MS.gene072834.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 1.91e-13 72.4
MS.gene072834.t1 MTR_1g093080 45.679 81 42 2 191 269 204 284 1.91e-13 72.8
MS.gene072834.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 2.63e-13 72.0
MS.gene072834.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 4.16e-13 72.0
MS.gene072834.t1 MTR_1g080330 56.897 58 24 1 194 250 171 228 7.30e-13 69.7
MS.gene072834.t1 MTR_1g080330 56.897 58 24 1 194 250 171 228 1.12e-12 70.5
MS.gene072834.t1 MTR_5g054300 40.230 87 50 2 185 270 186 271 1.62e-12 69.7
MS.gene072834.t1 MTR_4g086835 38.318 107 50 3 197 298 273 368 1.96e-12 69.7
MS.gene072834.t1 MTR_6g088950 27.673 159 106 2 10 159 5 163 3.63e-12 66.6
MS.gene072834.t1 MTR_5g041350 50.847 59 28 1 194 251 11 69 1.68e-11 66.6
MS.gene072834.t1 MTR_4g113140 46.377 69 36 1 197 264 234 302 4.46e-11 65.9
MS.gene072834.t1 MTR_6g032990 49.153 59 29 1 194 251 38 96 7.60e-11 64.7
MS.gene072834.t1 MTR_2g086450 49.153 59 29 1 194 251 41 99 7.67e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072834.t1 AT2G25180 57.713 376 116 12 6 359 11 365 4.47e-126 384
MS.gene072834.t1 AT4G31920 49.876 403 142 8 6 372 11 389 7.70e-110 341
MS.gene072834.t1 AT3G16857 55.674 282 93 5 8 266 33 305 4.81e-95 306
MS.gene072834.t1 AT3G16857 55.674 282 93 5 8 266 33 305 1.21e-94 305
MS.gene072834.t1 AT5G58080 49.319 367 145 9 2 349 8 352 1.48e-92 298
MS.gene072834.t1 AT2G01760 56.538 260 110 3 6 262 5 264 2.00e-86 274
MS.gene072834.t1 AT1G67710 57.769 251 97 4 9 256 8 252 4.64e-82 267
MS.gene072834.t1 AT2G01760 51.042 288 110 4 6 262 5 292 2.12e-80 259
MS.gene072834.t1 AT3G16857 54.733 243 78 5 47 266 2 235 1.18e-75 253
MS.gene072834.t1 AT2G01760 54.774 199 87 3 67 262 1 199 1.46e-56 194
MS.gene072834.t1 AT1G67710 57.513 193 73 4 67 256 1 187 2.28e-55 194
MS.gene072834.t1 AT5G49240 39.167 240 141 2 8 247 38 272 9.68e-52 180
MS.gene072834.t1 AT3G62670 37.091 275 144 6 2 267 31 285 3.75e-42 157
MS.gene072834.t1 AT1G67710 52.601 173 73 4 87 256 12 178 4.46e-41 155
MS.gene072834.t1 AT1G49190 35.547 256 150 5 7 255 29 276 4.16e-40 151
MS.gene072834.t1 AT5G07210 29.683 347 197 10 10 328 14 341 1.45e-34 139
MS.gene072834.t1 AT5G07210 29.014 355 197 11 10 328 14 349 4.22e-32 132
MS.gene072834.t1 AT2G27070 30.576 278 154 8 10 256 14 283 2.44e-28 120
MS.gene072834.t1 AT2G46790 36.082 194 99 6 12 185 37 225 2.08e-25 110
MS.gene072834.t1 AT2G46790 36.082 194 99 6 12 185 37 225 2.52e-25 110
MS.gene072834.t1 AT1G49190 39.200 125 76 0 7 131 29 153 3.33e-25 110
MS.gene072834.t1 AT5G24470 35.294 170 94 5 6 168 42 202 1.33e-23 105
MS.gene072834.t1 AT5G59570 55.172 87 36 2 180 263 120 206 3.84e-23 100
MS.gene072834.t1 AT5G59570 55.172 87 36 2 180 263 120 206 3.84e-23 100
MS.gene072834.t1 AT3G46640 52.381 84 40 0 182 265 128 211 9.85e-23 100
MS.gene072834.t1 AT3G46640 52.381 84 40 0 182 265 128 211 9.85e-23 100
MS.gene072834.t1 AT3G46640 53.086 81 38 0 182 262 128 208 1.34e-22 99.8
MS.gene072834.t1 AT1G68210 26.937 271 171 4 12 257 13 281 4.76e-22 101
MS.gene072834.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.25e-21 98.2
MS.gene072834.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.25e-21 98.2
MS.gene072834.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.25e-21 98.2
MS.gene072834.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.55e-21 98.6
MS.gene072834.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.55e-21 98.6
MS.gene072834.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.55e-21 98.6
MS.gene072834.t1 AT5G60100 37.795 127 75 2 8 130 59 185 3.68e-21 97.8
MS.gene072834.t1 AT2G40970 60.606 66 26 0 191 256 98 163 7.61e-21 92.8
MS.gene072834.t1 AT3G10760 65.000 60 21 0 197 256 104 163 1.01e-20 94.4
MS.gene072834.t1 AT5G05090 65.000 60 21 0 197 256 80 139 1.01e-20 92.8
MS.gene072834.t1 AT5G02810 38.525 122 72 1 12 130 78 199 1.41e-20 96.7
MS.gene072834.t1 AT5G44190 59.155 71 29 0 196 266 145 215 3.14e-20 93.2
MS.gene072834.t1 AT5G44190 59.155 71 29 0 196 266 145 215 4.01e-20 93.2
MS.gene072834.t1 AT5G61380 34.677 124 78 1 12 132 19 142 5.96e-19 91.3
MS.gene072834.t1 AT2G20570 43.878 98 51 1 159 256 118 211 2.24e-17 85.1
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.69e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 2.90e-13 72.8
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.69e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 2.90e-13 72.8
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.69e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 2.90e-13 72.8
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.69e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 2.90e-13 72.8
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.69e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 2.90e-13 72.8
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.69e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 2.90e-13 72.8
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.95e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.22e-13 72.4
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.95e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.22e-13 72.4
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.95e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.22e-13 72.4
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.95e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.22e-13 72.4
MS.gene072834.t1 AT4G18020 41.748 103 53 1 161 256 252 354 2.95e-16 82.4
MS.gene072834.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.22e-13 72.4
MS.gene072834.t1 AT2G20570 61.404 57 22 0 200 256 171 227 5.20e-16 81.3
MS.gene072834.t1 AT1G68670 31.818 154 90 4 181 333 198 337 5.47e-13 71.2
MS.gene072834.t1 AT4G13640 42.708 96 39 3 198 282 37 127 2.64e-12 68.6
MS.gene072834.t1 AT4G13640 42.708 96 39 3 198 282 37 127 2.85e-12 68.2
MS.gene072834.t1 AT1G49560 38.182 110 61 3 195 298 189 297 7.99e-12 67.4
MS.gene072834.t1 AT3G24120 42.105 95 39 3 198 281 41 130 1.09e-11 66.6
MS.gene072834.t1 AT3G24120 42.105 95 39 3 198 281 41 130 1.19e-11 66.6
MS.gene072834.t1 AT1G25550 51.667 60 28 1 197 255 208 267 1.44e-11 66.6
MS.gene072834.t1 AT3G04030 50.847 59 28 1 194 251 41 99 2.56e-11 66.2
MS.gene072834.t1 AT3G04030 50.847 59 28 1 194 251 41 99 2.98e-11 66.2
MS.gene072834.t1 AT2G03500 46.875 64 33 1 195 257 230 293 3.50e-11 66.2
MS.gene072834.t1 AT4G37180 49.180 61 30 1 196 255 208 268 4.25e-11 65.5
MS.gene072834.t1 AT4G37180 49.180 61 30 1 196 255 215 275 5.07e-11 65.1
MS.gene072834.t1 AT1G10470 32.061 131 77 2 14 132 36 166 7.14e-11 63.5
MS.gene072834.t1 AT1G10470 32.061 131 77 2 14 132 22 152 7.62e-11 63.2
MS.gene072834.t1 AT4G00760 27.670 206 121 8 30 215 1 198 7.75e-11 64.3

Find 151 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAGATAAGATGAAATTAT+TGG 0.247006 3.3:-87200594 MS.gene072834:CDS
TCCAACTTGTCTCATGGTTT+TGG 0.250920 3.3:-87204537 MS.gene072834:CDS
TCAAGCGACGTACCGTTATC+TGG 0.285277 3.3:-87201675 MS.gene072834:CDS
ACATTTGGCAGCATGTAATT+AGG 0.295640 3.3:-87203042 MS.gene072834:CDS
TCCAGCATGCTTCATTTGTA+TGG 0.304531 3.3:+87201323 None:intergenic
ATTCCTTGGGAGTGCATATC+TGG 0.307526 3.3:+87201540 None:intergenic
TATTTGAGAATGGGTGGTTC+TGG 0.310707 3.3:-87202217 MS.gene072834:CDS
TTGAAGAGAAAGAATTTGTT+TGG 0.311046 3.3:+87201649 None:intergenic
CGTTAATCAGAATATTCTTC+AGG 0.324708 3.3:-87202014 MS.gene072834:CDS
TGAACTTGTGGGACTTGAAA+TGG 0.326717 3.3:-87203314 MS.gene072834:CDS
GCTAGTATGGTGGCAGCCTT+AGG 0.331673 3.3:-87202256 MS.gene072834:CDS
GCAGAAAATTCAGATGAAAA+TGG 0.333558 3.3:-87202929 MS.gene072834:CDS
CCCTTGCAAGCGGGGTATCC+TGG 0.337535 3.3:-87201573 MS.gene072834:CDS
AATTGTTTAAATTACGTGAT+TGG 0.348210 3.3:+87202077 None:intergenic
AACTCTCTTGCTCCAGTTAA+CGG 0.366243 3.3:-87201408 MS.gene072834:CDS
AGAAGAAGCCTCGGGTTGTT+TGG 0.367984 3.3:-87202820 MS.gene072834:CDS
TAGAGGAGCTAAAGAACATT+TGG 0.372140 3.3:-87203057 MS.gene072834:CDS
CTGGAATTTAAGTTGATCAT+TGG 0.373200 3.3:+87202051 None:intergenic
TCCTTCGGGGCTTCTTCAGT+TGG 0.386130 3.3:-87202101 MS.gene072834:CDS
CTGAAGAATATTCTGATTAA+CGG 0.389124 3.3:+87202015 None:intergenic
TCTTGGTTCACTGGAATACT+TGG 0.389557 3.3:-87201223 MS.gene072834:CDS
AACGGTAATTTGCCATTTCA+AGG 0.393348 3.3:-87201489 MS.gene072834:CDS
CTGCCACCATACTAGCTTGT+TGG 0.395940 3.3:+87202263 None:intergenic
CGGTCTTCCCATCCTTGAAA+TGG 0.402240 3.3:+87201477 None:intergenic
GAAAGAAAACACGGAGGTAT+AGG 0.402851 3.3:-87201792 MS.gene072834:CDS
GCTGAAACCTGTGAGATTAG+AGG 0.402851 3.3:-87203074 MS.gene072834:CDS
AACACTCCAACTAGTCTTAA+CGG 0.404206 3.3:-87202136 MS.gene072834:CDS
TTCTAATAATCTTGGTTCAC+TGG 0.404941 3.3:-87201232 MS.gene072834:CDS
ATTCTGATTAACGGGAGTTA+TGG 0.410279 3.3:+87202024 None:intergenic
CCTTCGGGGCTTCTTCAGTT+GGG 0.414763 3.3:-87202100 MS.gene072834:CDS
CAAGATAAGATGAAATTATT+GGG 0.416183 3.3:-87200593 MS.gene072834:CDS
ATTTCAGTGTTGTCTGCATA+TGG 0.417968 3.3:-87203148 MS.gene072834:intron
CACGCATTCCGATGGGAAAA+CGG 0.428750 3.3:+87204579 None:intergenic
AAGGTAGGCACGGTGATAAT+TGG 0.437512 3.3:-87201698 MS.gene072834:CDS
CGAGGCTTCTTCTGAGCTGA+TGG 0.438400 3.3:+87202830 None:intergenic
AAACACGGAGGTATAGGAAT+AGG 0.439930 3.3:-87201786 MS.gene072834:CDS
TGCAAACCAACAAGCTAGTA+TGG 0.442595 3.3:-87202269 MS.gene072834:CDS
AGGTGGAGCTAGTTGTTGTC+TGG 0.446742 3.3:+87201367 None:intergenic
AGATCAATCTTATTTGAGAA+TGG 0.446802 3.3:-87202227 MS.gene072834:CDS
GTTGCTGCTGTTAATCAGTT+AGG 0.449852 3.3:-87202773 MS.gene072834:CDS
TGAAGAATATTCTGATTAAC+GGG 0.453613 3.3:+87202016 None:intergenic
GATCAATCTTATTTGAGAAT+GGG 0.453918 3.3:-87202226 MS.gene072834:CDS
AGCTTAAATCCATCCATGTC+AGG 0.455967 3.3:+87203340 None:intergenic
GGTAAGTAGCATCCTGATTA+CGG 0.456384 3.3:+87201457 None:intergenic
GACTAAGAAAAGAAAGGATC+AGG 0.456770 3.3:-87202900 MS.gene072834:CDS
GCTTCTTTGCCCTTGCAAGC+GGG 0.456904 3.3:-87201582 MS.gene072834:CDS
GGAGGTATAGGAATAGGATA+TGG 0.457148 3.3:-87201780 MS.gene072834:CDS
TGCTGGCTTATGATATTAGC+TGG 0.457220 3.3:+87201261 None:intergenic
GGCTTCTTTGCCCTTGCAAG+CGG 0.465152 3.3:-87201583 MS.gene072834:CDS
GAAGATGAGGATAAAGAGAA+TGG 0.467439 3.3:-87202869 MS.gene072834:CDS
AATTCACCTGAGTATATAAA+CGG 0.467724 3.3:-87201507 MS.gene072834:CDS
GAGCTAGTTGTTGTCTGGCC+TGG 0.468240 3.3:+87201372 None:intergenic
GATTATTAGAAAACTTCTGC+TGG 0.476268 3.3:+87201244 None:intergenic
TCCAAAACCATGAGACAAGT+TGG 0.479542 3.3:+87204536 None:intergenic
AATTATCCCACTAGGTGAAA+AGG 0.479567 3.3:+87202168 None:intergenic
ACACTCCAACTAGTCTTAAC+GGG 0.480069 3.3:-87202135 MS.gene072834:CDS
CGACGATCCAACTTGTCTCA+TGG 0.481091 3.3:-87204543 MS.gene072834:CDS
CCAGCATGCTTCATTTGTAT+GGG 0.481160 3.3:+87201324 None:intergenic
TTTAGCTCCTCTAATCTCAC+AGG 0.481770 3.3:+87203067 None:intergenic
AGGATGGGAAGACCGTAATC+AGG 0.483908 3.3:-87201469 MS.gene072834:CDS
TTTAAGCTGCTTGAACTTGT+GGG 0.484142 3.3:-87203325 MS.gene072834:CDS
ACCAGGATACCCCGCTTGCA+AGG 0.485505 3.3:+87201572 None:intergenic
TGTTTGAGATACCGAGACTT+GGG 0.488772 3.3:+87201841 None:intergenic
CCATGCCCGTTAAGACTAGT+TGG 0.492442 3.3:+87202130 None:intergenic
CAGGGAATGCCAATGTCCAT+AGG 0.498172 3.3:-87201995 MS.gene072834:CDS
CCCATACAAATGAAGCATGC+TGG 0.498373 3.3:-87201324 MS.gene072834:CDS
GTTAATCAGAATATTCTTCA+GGG 0.498546 3.3:-87202013 MS.gene072834:CDS
TCCGATGGGAAAACGGTCAC+CGG 0.502454 3.3:+87204586 None:intergenic
TCTTTCTCTATGCTGGATCA+AGG 0.503800 3.3:-87201717 MS.gene072834:CDS
GTAATTTGCCATTTCAAGGA+TGG 0.513037 3.3:-87201485 MS.gene072834:CDS
GAAGAAGAAGTCTGATCCAA+AGG 0.514805 3.3:-87203020 MS.gene072834:CDS
GACAAAACTACTTCTGATAG+TGG 0.516959 3.3:-87202974 MS.gene072834:CDS
GAACGTGGCAAGCCATCTCC+AGG 0.523004 3.3:-87202411 MS.gene072834:intron
TTTGTTTGGATTCCAGATAA+CGG 0.525042 3.3:+87201663 None:intergenic
ATTTAAGCTGCTTGAACTTG+TGG 0.531591 3.3:-87203326 MS.gene072834:CDS
ATACTTGGCGAGTTCAATGA+TGG 0.533419 3.3:-87201208 MS.gene072834:CDS
CTAGTATGGTGGCAGCCTTA+GGG 0.534344 3.3:-87202255 MS.gene072834:CDS
TGTTATTGCTTGACTAGTTG+TGG 0.534638 3.3:+87203426 None:intergenic
CTAGTTGTTGTCTGGCCTGG+TGG 0.535200 3.3:+87201375 None:intergenic
CTTCTTTGCCCTTGCAAGCG+GGG 0.537483 3.3:-87201581 MS.gene072834:CDS
TAATTTGCCATTTCAAGGAT+GGG 0.541605 3.3:-87201484 MS.gene072834:CDS
AAATTACCGTTTATATACTC+AGG 0.541639 3.3:+87201501 None:intergenic
GCCTCGGGTTGTTTGGTCTG+TGG 0.542268 3.3:-87202813 MS.gene072834:CDS
GGCAGTGGACTAAGATCCGC+AGG 0.543371 3.3:-87202953 MS.gene072834:CDS
TTGTTTGAGATACCGAGACT+TGG 0.548378 3.3:+87201840 None:intergenic
TAACGGGAGTTATGGCTGAC+TGG 0.548521 3.3:+87202032 None:intergenic
ACTACTTCTGATAGTGGCAG+TGG 0.549024 3.3:-87202968 MS.gene072834:CDS
TACCACTCAAATGTTACTTG+TGG 0.549615 3.3:-87201438 MS.gene072834:CDS
TGTGCACATCACTGATTACC+AGG 0.551505 3.3:+87203365 None:intergenic
CATCAGCTCAGAAGAAGCCT+CGG 0.554303 3.3:-87202829 MS.gene072834:CDS
GGCGAGAACACGCATTCCGA+TGG 0.558372 3.3:+87204571 None:intergenic
CCAGGATACCCCGCTTGCAA+GGG 0.561131 3.3:+87201573 None:intergenic
AGTCTCGGTATCTCAAACAA+TGG 0.562603 3.3:-87201837 MS.gene072834:CDS
CAGATAATCACAGGCACCAT+GGG 0.562735 3.3:+87203096 None:intergenic
GGCGAGTTCAATGATGGGAC+AGG 0.562860 3.3:-87201202 MS.gene072834:intron
CAATCTTATTTGAGAATGGG+TGG 0.565295 3.3:-87202223 MS.gene072834:CDS
GAGGCTTCTTCTGAGCTGAT+GGG 0.565647 3.3:+87202831 None:intergenic
AAAGCTGACTAAGAAAAGAA+AGG 0.566687 3.3:-87202906 MS.gene072834:CDS
AGGGAATGCCAATGTCCATA+GGG 0.567298 3.3:-87201994 MS.gene072834:intron
TCTCTATGCTGGATCAAGGT+AGG 0.568314 3.3:-87201713 MS.gene072834:CDS
AGATTGATCTGCACTCCCTA+AGG 0.568615 3.3:+87202240 None:intergenic
GACAACAACTAGCTCCACCT+TGG 0.570450 3.3:-87201364 MS.gene072834:CDS
CTCAAACAATGGCTTGATGT+CGG 0.579465 3.3:-87201826 MS.gene072834:CDS
TGTTCCTCCTTCAGATAACA+TGG 0.580834 3.3:-87201604 MS.gene072834:CDS
ATCAGCTCAGAAGAAGCCTC+GGG 0.581453 3.3:-87202828 MS.gene072834:CDS
TATGCGATAATTACTCCGAC+GGG 0.584211 3.3:-87200559 MS.gene072834:CDS
AGATCCCCACTTACTTATGA+CGG 0.584541 3.3:+87203285 None:intergenic
CCAACTAGTCTTAACGGGCA+TGG 0.588692 3.3:-87202130 MS.gene072834:CDS
GTTTGAGATACCGAGACTTG+GGG 0.591845 3.3:+87201842 None:intergenic
GCAGATAATCACAGGCACCA+TGG 0.592029 3.3:+87203095 None:intergenic
TGATCAAACCCTATGGACAT+TGG 0.593062 3.3:+87201986 None:intergenic
TGCATATGGTGATACAAAGC+TGG 0.593897 3.3:-87203134 MS.gene072834:CDS
GATCCCCACTTACTTATGAC+GGG 0.593976 3.3:+87203286 None:intergenic
AGAAAATTCTGAATGTTGAG+AGG 0.594209 3.3:+87201737 None:intergenic
ATATGCGATAATTACTCCGA+CGG 0.598221 3.3:-87200560 MS.gene072834:CDS
GTGCACATGCCTGACATGGA+TGG 0.600433 3.3:-87203349 MS.gene072834:CDS
CCCAACTGAAGAAGCCCCGA+AGG 0.603189 3.3:+87202100 None:intergenic
AGATTACCAATTATCCCACT+AGG 0.605896 3.3:+87202160 None:intergenic
AAAGAAGCCATGTTATCTGA+AGG 0.609057 3.3:+87201597 None:intergenic
AGGTTTCAGCAGATAATCAC+AGG 0.609824 3.3:+87203087 None:intergenic
TGAGCTGCATTCAGTTAACT+CGG 0.614968 3.3:+87201296 None:intergenic
TGATGTGCACATGCCTGACA+TGG 0.615041 3.3:-87203353 MS.gene072834:CDS
TCAGGATGAAGACGAAGATG+AGG 0.615403 3.3:-87202882 MS.gene072834:CDS
ACAAGTTGGATCGTCGTCAA+CGG 0.615563 3.3:+87204550 None:intergenic
GCGAGAACACGCATTCCGAT+GGG 0.617268 3.3:+87204572 None:intergenic
GACCGTGGTATTGACATCTA+CGG 0.617438 3.3:+87204504 None:intergenic
ATATCTGGCAACGAACCACC+AGG 0.619562 3.3:+87201555 None:intergenic
TTGCCAGATATGCACTCCCA+AGG 0.620552 3.3:-87201543 MS.gene072834:CDS
ATGCTGGATCAAGGTAGGCA+CGG 0.622381 3.3:-87201708 MS.gene072834:CDS
GATAAGATGAAATTATTGGG+TGG 0.625103 3.3:-87200590 MS.gene072834:CDS
ATCCACAAGTAACATTTGAG+TGG 0.625700 3.3:+87201436 None:intergenic
CCCACTTACTTATGACGGGA+AGG 0.626480 3.3:+87203290 None:intergenic
GAAGCCATGTTATCTGAAGG+AGG 0.632238 3.3:+87201600 None:intergenic
GATACAAAGCTGGTGATGAA+AGG 0.634012 3.3:-87203124 MS.gene072834:CDS
AAATATCACAAGGGAGAACG+TGG 0.641409 3.3:-87202426 MS.gene072834:CDS
TACTTGGCGAGTTCAATGAT+GGG 0.644216 3.3:-87201207 MS.gene072834:CDS
TTGCAAGCGGGGTATCCTGG+TGG 0.644472 3.3:-87201570 MS.gene072834:CDS
TAACAGCAGCAACAAACTTG+CGG 0.664827 3.3:+87202783 None:intergenic
TCCACAGACCAAACAACCCG+AGG 0.670707 3.3:+87202812 None:intergenic
AAACAAAGACAAGTTTGACC+TGG 0.671629 3.3:-87203383 MS.gene072834:CDS
CTCCGTAGATGTCAATACCA+CGG 0.676022 3.3:-87204506 MS.gene072834:intron
TTTGAGATACCGAGACTTGG+GGG 0.680383 3.3:+87201843 None:intergenic
TGAATGTCGAAAATATCACA+AGG 0.689686 3.3:-87202436 MS.gene072834:CDS
GTGATGAAAGGAATTTCCCA+TGG 0.694201 3.3:-87203112 MS.gene072834:CDS
ACGCACCCTGAAAGAAAACA+CGG 0.699020 3.3:-87201801 MS.gene072834:CDS
AAACCAACAAGCTAGTATGG+TGG 0.708833 3.3:-87202266 MS.gene072834:CDS
GAATGTCGAAAATATCACAA+GGG 0.725612 3.3:-87202435 MS.gene072834:CDS
CTGTCACAAAGATACCCCGT+CGG 0.726754 3.3:+87200544 None:intergenic
ATGCGATAATTACTCCGACG+GGG 0.780483 3.3:-87200558 MS.gene072834:CDS
AGAGAATGGTAATGACAACG+AGG 0.788270 3.3:-87202855 MS.gene072834:CDS
CACCCTGAAAGAAAACACGG+AGG 0.809478 3.3:-87201798 MS.gene072834:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTGAATTTC+TGG + chr3.3:87200828-87200847 None:intergenic 10.0%
!! ATAAAAAAAAACATGTCTTT+AGG - chr3.3:87200837-87200856 MS.gene072834:intron 15.0%
!! ATTAAAAAATTTAGTATCCA+AGG + chr3.3:87203799-87203818 None:intergenic 15.0%
!! TCAAAATGAATAAATAGAAA+AGG + chr3.3:87201917-87201936 None:intergenic 15.0%
!! TGAAATTTGAAGATTTAAAT+TGG - chr3.3:87204210-87204229 MS.gene072834:intron 15.0%
!!! ACATTTTTTGAATATAATGT+TGG - chr3.3:87203969-87203988 MS.gene072834:intron 15.0%
!!! ATATATTTCATTTTGTTTAG+TGG - chr3.3:87201272-87201291 MS.gene072834:CDS 15.0%
!!! ATCATATCAAGAATTTTTTT+GGG + chr3.3:87202688-87202707 None:intergenic 15.0%
!! AAGAACATCAATGAAATATA+TGG + chr3.3:87204266-87204285 None:intergenic 20.0%
!! AATTAGTAAAAATCATTCCT+TGG + chr3.3:87203620-87203639 None:intergenic 20.0%
!! AATTGTTTAAATTACGTGAT+TGG + chr3.3:87203069-87203088 None:intergenic 20.0%
!! AATTTGAAGATTTAAATTGG+TGG - chr3.3:87204213-87204232 MS.gene072834:intron 20.0%
!! ATAATACTCAAATTCAGTAA+TGG + chr3.3:87202632-87202651 None:intergenic 20.0%
!! ATATCTAGTAAAAATATGCT+TGG + chr3.3:87201174-87201193 None:intergenic 20.0%
!! ATTAACACCAAAACAAAAAA+TGG + chr3.3:87201328-87201347 None:intergenic 20.0%
!! ATTAGTAAAAATCATTCCTT+GGG + chr3.3:87203619-87203638 None:intergenic 20.0%
!! CAAGATAAGATGAAATTATT+GGG - chr3.3:87204550-87204569 MS.gene072834:CDS 20.0%
!!! CAATTTTTACAGATTTTATG+TGG - chr3.3:87201038-87201057 MS.gene072834:intron 20.0%
!!! CATCATATCAAGAATTTTTT+TGG + chr3.3:87202689-87202708 None:intergenic 20.0%
!!! CATGTTGTTTTATTTAACTT+AGG - chr3.3:87204411-87204430 MS.gene072834:intron 20.0%
!!! TATTTTTACTAGATATGTGA+AGG - chr3.3:87201178-87201197 MS.gene072834:intron 20.0%
!!! TCAAAATGTTTTTGAATATC+TGG - chr3.3:87202493-87202512 MS.gene072834:intron 20.0%
!!! TGTATAGTTTTTTTTGCATA+TGG - chr3.3:87204028-87204047 MS.gene072834:intron 20.0%
! AAAAAATTTAGTATCCAAGG+TGG + chr3.3:87203796-87203815 None:intergenic 25.0%
! AAATTACCGTTTATATACTC+AGG + chr3.3:87203645-87203664 None:intergenic 25.0%
! AACATGGTATCAAATTACTA+TGG + chr3.3:87204515-87204534 None:intergenic 25.0%
! AACGATATTGTGTAGATATT+TGG - chr3.3:87200897-87200916 MS.gene072834:intron 25.0%
! AAGAAAAAAATTAACAGCTG+AGG + chr3.3:87201894-87201913 None:intergenic 25.0%
! AATTCACCTGAGTATATAAA+CGG - chr3.3:87203636-87203655 MS.gene072834:intron 25.0%
! ACTATGGAAGCAAAATATTT+AGG + chr3.3:87204499-87204518 None:intergenic 25.0%
! ATAAAAATTGTTTGTGTTGC+AGG + chr3.3:87202421-87202440 None:intergenic 25.0%
! ATGAAAAGAGTCATGATTTA+GGG - chr3.3:87200945-87200964 MS.gene072834:intron 25.0%
! ATTTCTTTCACTGAATGTTT+CGG - chr3.3:87202797-87202816 MS.gene072834:CDS 25.0%
! CAAAGACAAGAAAAGAAAAA+TGG + chr3.3:87201527-87201546 None:intergenic 25.0%
! CTGAAGAATATTCTGATTAA+CGG + chr3.3:87203131-87203150 None:intergenic 25.0%
! GCAAGATAAGATGAAATTAT+TGG - chr3.3:87204549-87204568 MS.gene072834:CDS 25.0%
! GTTAATCAGAATATTCTTCA+GGG - chr3.3:87203130-87203149 MS.gene072834:CDS 25.0%
! TAAAGAACTAGAAAAATACC+TGG + chr3.3:87202753-87202772 None:intergenic 25.0%
! TAATGGAATACTTTATGACA+TGG + chr3.3:87202615-87202634 None:intergenic 25.0%
! TACTAATCATGAAGAAATAC+AGG + chr3.3:87201583-87201602 None:intergenic 25.0%
! TATAATCTAATCAGTATGTG+TGG + chr3.3:87204091-87204110 None:intergenic 25.0%
! TGAAGAATATTCTGATTAAC+GGG + chr3.3:87203130-87203149 None:intergenic 25.0%
! TGTTTCTTTATACTATCACA+GGG + chr3.3:87201020-87201039 None:intergenic 25.0%
!! AAGCAAAATATTTAGGACAA+GGG + chr3.3:87204492-87204511 None:intergenic 25.0%
!! AGATCAATCTTATTTGAGAA+TGG - chr3.3:87202916-87202935 MS.gene072834:CDS 25.0%
!! CAGAAGTTTTCTAATAATCT+TGG - chr3.3:87203903-87203922 MS.gene072834:intron 25.0%
!! GATCAATCTTATTTGAGAAT+GGG - chr3.3:87202917-87202936 MS.gene072834:CDS 25.0%
!! GGAACTTTTACTAAGAATAA+AGG - chr3.3:87200918-87200937 MS.gene072834:intron 25.0%
!! TTGAAGAGAAAGAATTTGTT+TGG + chr3.3:87203497-87203516 None:intergenic 25.0%
!! TTGTTTCTTTATACTATCAC+AGG + chr3.3:87201021-87201040 None:intergenic 25.0%
!!! AAACATTTGTTTTTCTATCC+TGG - chr3.3:87204355-87204374 MS.gene072834:intron 25.0%
!!! AAGTGATACTTATTTCTGAT+TGG - chr3.3:87201682-87201701 MS.gene072834:CDS 25.0%
!!! AATGATTTTAAGTCTTCTCT+CGG + chr3.3:87204177-87204196 None:intergenic 25.0%
!!! AGTGATACTTATTTCTGATT+GGG - chr3.3:87201683-87201702 MS.gene072834:CDS 25.0%
!!! CGATGTTTATTTTAAATCCT+AGG - chr3.3:87202518-87202537 MS.gene072834:intron 25.0%
!!! TCATAAGTCATTTTAAACCT+AGG + chr3.3:87202538-87202557 None:intergenic 25.0%
!!! TCATTTTGACTCTTGTTTAT+TGG - chr3.3:87201928-87201947 MS.gene072834:intron 25.0%
AAAGCTGACTAAGAAAAGAA+AGG - chr3.3:87202237-87202256 MS.gene072834:CDS 30.0%
AAGTCAACACACTATGAATT+TGG + chr3.3:87200980-87200999 None:intergenic 30.0%
ACAACATGCTATATACTCAA+CGG + chr3.3:87204399-87204418 None:intergenic 30.0%
ACTTAATTATGTGCTTGCTT+GGG - chr3.3:87201140-87201159 MS.gene072834:intron 30.0%
AGAAAATTCTGAATGTTGAG+AGG + chr3.3:87203409-87203428 None:intergenic 30.0%
ATAAAATTCAGTAAAGCTCG+AGG + chr3.3:87202457-87202476 None:intergenic 30.0%
ATCCTATGTGAATGTTCTAA+AGG + chr3.3:87204333-87204352 None:intergenic 30.0%
CAAGGAAATAATGTTTGAGA+TGG + chr3.3:87204067-87204086 None:intergenic 30.0%
CGTTAATCAGAATATTCTTC+AGG - chr3.3:87203129-87203148 MS.gene072834:CDS 30.0%
GAAACATTCAGTGAAAGAAA+TGG + chr3.3:87202798-87202817 None:intergenic 30.0%
GAATGTCGAAAATATCACAA+GGG - chr3.3:87202708-87202727 MS.gene072834:intron 30.0%
GATAAGATGAAATTATTGGG+TGG - chr3.3:87204553-87204572 MS.gene072834:CDS 30.0%
GATGAAAAGAGTCATGATTT+AGG - chr3.3:87200944-87200963 MS.gene072834:intron 30.0%
GATTATTAGAAAACTTCTGC+TGG + chr3.3:87203902-87203921 None:intergenic 30.0%
GCAGAAAATTCAGATGAAAA+TGG - chr3.3:87202214-87202233 MS.gene072834:CDS 30.0%
TGAATGTCGAAAATATCACA+AGG - chr3.3:87202707-87202726 MS.gene072834:intron 30.0%
TTCATTGATGTTCTTTGTGA+TGG - chr3.3:87204271-87204290 MS.gene072834:intron 30.0%
TTCTAATAATCTTGGTTCAC+TGG - chr3.3:87203911-87203930 MS.gene072834:intron 30.0%
TTGACTATAACCAAGTGATT+GGG + chr3.3:87201504-87201523 None:intergenic 30.0%
TTTCTTTCACTGAATGTTTC+GGG - chr3.3:87202798-87202817 MS.gene072834:CDS 30.0%
TTTGTTTGGATTCCAGATAA+CGG + chr3.3:87203483-87203502 None:intergenic 30.0%
! AAGCAATGAAGCTCTAATTA+CGG + chr3.3:87201209-87201228 None:intergenic 30.0%
! AGAATTTTCTTTCTCTATGC+TGG - chr3.3:87203419-87203438 MS.gene072834:CDS 30.0%
! AGCAAAATATTTAGGACAAG+GGG + chr3.3:87204491-87204510 None:intergenic 30.0%
! GAAGCAAAATATTTAGGACA+AGG + chr3.3:87204493-87204512 None:intergenic 30.0%
! TAATTTGCCATTTCAAGGAT+GGG - chr3.3:87203659-87203678 MS.gene072834:intron 30.0%
! TTGTTTTCACATCAGTATTC+AGG + chr3.3:87203219-87203238 None:intergenic 30.0%
!! AATGTTTCGGGTTTATGAAA+TGG - chr3.3:87202810-87202829 MS.gene072834:CDS 30.0%
!! ATGATTTTAAGTCTTCTCTC+GGG + chr3.3:87204176-87204195 None:intergenic 30.0%
!! CTGGAATTTAAGTTGATCAT+TGG + chr3.3:87203095-87203114 None:intergenic 30.0%
!! CTTTAGGATCAAATCTAACT+GGG - chr3.3:87200853-87200872 MS.gene072834:intron 30.0%
!! GTGATACTTATTTCTGATTG+GGG - chr3.3:87201684-87201703 MS.gene072834:CDS 30.0%
!! TCTTTAGGATCAAATCTAAC+TGG - chr3.3:87200852-87200871 MS.gene072834:intron 30.0%
!! TTCACTGTTGCTTTCTTTAT+TGG - chr3.3:87201621-87201640 MS.gene072834:CDS 30.0%
!! TTCATTTTGTTTAGTGGCTT+TGG - chr3.3:87201278-87201297 MS.gene072834:CDS 30.0%
!! TTTGTTTTTCTATCCTGGAT+TGG - chr3.3:87204360-87204379 MS.gene072834:intron 30.0%
!!! TAATGTTGTTTTACTTGCAG+AGG - chr3.3:87202657-87202676 MS.gene072834:intron 30.0%
!!! TGGTCAACCATTTTTTGTTT+TGG - chr3.3:87201318-87201337 MS.gene072834:CDS 30.0%
AAACAAAGACAAGTTTGACC+TGG - chr3.3:87201760-87201779 MS.gene072834:CDS 35.0%
AAAGAAGCCATGTTATCTGA+AGG + chr3.3:87203549-87203568 None:intergenic 35.0%
AATATTCCGGAGTTTAGTCA+GGG - chr3.3:87201392-87201411 MS.gene072834:CDS 35.0%
AATTATCCCACTAGGTGAAA+AGG + chr3.3:87202978-87202997 None:intergenic 35.0%
ACAAATATAACCATGCTGAC+TGG + chr3.3:87204147-87204166 None:intergenic 35.0%
ACAAGTTATTGTACCAATCC+AGG + chr3.3:87204376-87204395 None:intergenic 35.0%
ACATTTGGCAGCATGTAATT+AGG - chr3.3:87202101-87202120 MS.gene072834:CDS 35.0%
ACTAGAAAAATACCTGGAGA+TGG + chr3.3:87202747-87202766 None:intergenic 35.0%
AGATTACCAATTATCCCACT+AGG + chr3.3:87202986-87203005 None:intergenic 35.0%
ATATGCGATAATTACTCCGA+CGG - chr3.3:87204583-87204602 MS.gene072834:CDS 35.0%
ATCCACAAGTAACATTTGAG+TGG + chr3.3:87203710-87203729 None:intergenic 35.0%
ATCCGGGAATTTATTTGGAT+GGG + chr3.3:87203247-87203266 None:intergenic 35.0%
ATTCTGATTAACGGGAGTTA+TGG + chr3.3:87203122-87203141 None:intergenic 35.0%
ATTTAAGCTGCTTGAACTTG+TGG - chr3.3:87201817-87201836 MS.gene072834:CDS 35.0%
ATTTCAGTGTTGTCTGCATA+TGG - chr3.3:87201995-87202014 MS.gene072834:CDS 35.0%
CAAATAAATTCCCGGATCAA+CGG - chr3.3:87203250-87203269 MS.gene072834:intron 35.0%
CACTTAATTATGTGCTTGCT+TGG - chr3.3:87201139-87201158 MS.gene072834:intron 35.0%
CTAAAGGACATCGAAAGTTA+CGG + chr3.3:87204317-87204336 None:intergenic 35.0%
GAAATGAAATTCATCCCAAG+TGG + chr3.3:87202570-87202589 None:intergenic 35.0%
GAAGATGAGGATAAAGAGAA+TGG - chr3.3:87202274-87202293 MS.gene072834:CDS 35.0%
GACAAAACTACTTCTGATAG+TGG - chr3.3:87202169-87202188 MS.gene072834:CDS 35.0%
GACTAAGAAAAGAAAGGATC+AGG - chr3.3:87202243-87202262 MS.gene072834:CDS 35.0%
GATCAAATCTAACTGGGAAA+TGG - chr3.3:87200859-87200878 MS.gene072834:intron 35.0%
GTTGACTATAACCAAGTGAT+TGG + chr3.3:87201505-87201524 None:intergenic 35.0%
TAAAGTATGCAATGCTCGTT+TGG - chr3.3:87204445-87204464 MS.gene072834:intron 35.0%
TAATATTCCGGAGTTTAGTC+AGG - chr3.3:87201391-87201410 MS.gene072834:CDS 35.0%
TAGAGGAGCTAAAGAACATT+TGG - chr3.3:87202086-87202105 MS.gene072834:CDS 35.0%
TGACTAAACTCCGGAATATT+AGG + chr3.3:87201392-87201411 None:intergenic 35.0%
TGGACTGAATATGCACTTTA+TGG - chr3.3:87201298-87201317 MS.gene072834:CDS 35.0%
TTATGATGATAGATGCCACT+TGG - chr3.3:87202552-87202571 MS.gene072834:intron 35.0%
TTCCCATAAATGCTTCTGTA+TGG - chr3.3:87203994-87204013 MS.gene072834:intron 35.0%
TTCCCATCCAAATAAATTCC+CGG - chr3.3:87203242-87203261 MS.gene072834:intron 35.0%
TTTAAGCTGCTTGAACTTGT+GGG - chr3.3:87201818-87201837 MS.gene072834:CDS 35.0%
! AACGGTAATTTGCCATTTCA+AGG - chr3.3:87203654-87203673 MS.gene072834:intron 35.0%
! ACTGTTGTTGCTTAGATTTC+AGG - chr3.3:87201555-87201574 MS.gene072834:CDS 35.0%
! ATGAGCAACTTTTCCTACTA+CGG + chr3.3:87201244-87201263 None:intergenic 35.0%
! CAATCTTATTTGAGAATGGG+TGG - chr3.3:87202920-87202939 MS.gene072834:CDS 35.0%
! GTAATTTGCCATTTCAAGGA+TGG - chr3.3:87203658-87203677 MS.gene072834:intron 35.0%
! TACCACTCAAATGTTACTTG+TGG - chr3.3:87203705-87203724 MS.gene072834:intron 35.0%
! TATGATGATAGATGCCACTT+GGG - chr3.3:87202553-87202572 MS.gene072834:intron 35.0%
! TGTTATTGCTTGACTAGTTG+TGG + chr3.3:87201720-87201739 None:intergenic 35.0%
! TTTTCACCTAGTGGGATAAT+TGG - chr3.3:87202977-87202996 MS.gene072834:CDS 35.0%
!! AACACTCCAACTAGTCTTAA+CGG - chr3.3:87203007-87203026 MS.gene072834:CDS 35.0%
!! AAGCCATACAGAAGCATTTA+TGG + chr3.3:87204000-87204019 None:intergenic 35.0%
!! AGCCATACAGAAGCATTTAT+GGG + chr3.3:87203999-87204018 None:intergenic 35.0%
!! GTCCTTTAGAACATTCACAT+AGG - chr3.3:87204328-87204347 MS.gene072834:intron 35.0%
!!! AGTAGTTTTGTCTGGTTTAC+TGG + chr3.3:87202161-87202180 None:intergenic 35.0%
!!! CTATCAGAAGTAGTTTTGTC+TGG + chr3.3:87202169-87202188 None:intergenic 35.0%
!!! CTGGTTTTGTTTTTCTCCTT+TGG + chr3.3:87202142-87202161 None:intergenic 35.0%
!!! GTCTTTGTTTTCTCTCAACA+TGG + chr3.3:87201750-87201769 None:intergenic 35.0%
AAACCAACAAGCTAGTATGG+TGG - chr3.3:87202877-87202896 MS.gene072834:CDS 40.0%
AAATATCACAAGGGAGAACG+TGG - chr3.3:87202717-87202736 MS.gene072834:intron 40.0%
AACTCTCTTGCTCCAGTTAA+CGG - chr3.3:87203735-87203754 MS.gene072834:intron 40.0%
AGATCCCCACTTACTTATGA+CGG + chr3.3:87201861-87201880 None:intergenic 40.0%
AGCTTAAATCCATCCATGTC+AGG + chr3.3:87201806-87201825 None:intergenic 40.0%
AGGTTTCAGCAGATAATCAC+AGG + chr3.3:87202059-87202078 None:intergenic 40.0%
AGTCTCGGTATCTCAAACAA+TGG - chr3.3:87203306-87203325 MS.gene072834:CDS 40.0%
ATACTTGGCGAGTTCAATGA+TGG - chr3.3:87203935-87203954 MS.gene072834:intron 40.0%
CCAGCATGCTTCATTTGTAT+GGG + chr3.3:87203822-87203841 None:intergenic 40.0%
CGAAAGTTACGGTGGTTAAT+TGG + chr3.3:87204306-87204325 None:intergenic 40.0%
CGTTGATCCGGGAATTTATT+TGG + chr3.3:87203252-87203271 None:intergenic 40.0%
CTAAACTCCGGAATATTAGG+AGG + chr3.3:87201389-87201408 None:intergenic 40.0%
CTAATCAGTATGTGTGGTCA+AGG + chr3.3:87204085-87204104 None:intergenic 40.0%
CTCAAACAATGGCTTGATGT+CGG - chr3.3:87203317-87203336 MS.gene072834:CDS 40.0%
GAAGAAGAAGTCTGATCCAA+AGG - chr3.3:87202123-87202142 MS.gene072834:CDS 40.0%
GATCACTTGCAAAACAGCAA+GGG - chr3.3:87203175-87203194 MS.gene072834:intron 40.0%
GATCCGGGAATTTATTTGGA+TGG + chr3.3:87203248-87203267 None:intergenic 40.0%
GGTAAGTAGCATCCTGATTA+CGG + chr3.3:87203689-87203708 None:intergenic 40.0%
GTGATGAAAGGAATTTCCCA+TGG - chr3.3:87202031-87202050 MS.gene072834:CDS 40.0%
GTTGCTGCTGTTAATCAGTT+AGG - chr3.3:87202370-87202389 MS.gene072834:intron 40.0%
TAACAGCAGCAACAAACTTG+CGG + chr3.3:87202363-87202382 None:intergenic 40.0%
TACTTGGCGAGTTCAATGAT+GGG - chr3.3:87203936-87203955 MS.gene072834:intron 40.0%
TAGAGCTTCATTGCTTGTAG+AGG - chr3.3:87201213-87201232 MS.gene072834:CDS 40.0%
TATGCGATAATTACTCCGAC+GGG - chr3.3:87204584-87204603 MS.gene072834:CDS 40.0%
TATTTGAGAATGGGTGGTTC+TGG - chr3.3:87202926-87202945 MS.gene072834:CDS 40.0%
TCCAAAACCATGAGACAAGT+TGG + chr3.3:87200610-87200629 None:intergenic 40.0%
TCCAGCATGCTTCATTTGTA+TGG + chr3.3:87203823-87203842 None:intergenic 40.0%
TCTAACTGGGAAATGGAGTT+AGG - chr3.3:87200866-87200885 MS.gene072834:intron 40.0%
TCTTGGTTCACTGGAATACT+TGG - chr3.3:87203920-87203939 MS.gene072834:intron 40.0%
TCTTTCTCTATGCTGGATCA+AGG - chr3.3:87203426-87203445 MS.gene072834:CDS 40.0%
TGAACTTGTGGGACTTGAAA+TGG - chr3.3:87201829-87201848 MS.gene072834:CDS 40.0%
TGAGCTGCATTCAGTTAACT+CGG + chr3.3:87203850-87203869 None:intergenic 40.0%
TGATCAAACCCTATGGACAT+TGG + chr3.3:87203160-87203179 None:intergenic 40.0%
TGATCACTTGCAAAACAGCA+AGG - chr3.3:87203174-87203193 MS.gene072834:intron 40.0%
TGATTGGGATCAAGAGGTTA+AGG + chr3.3:87201489-87201508 None:intergenic 40.0%
TGCAAACCAACAAGCTAGTA+TGG - chr3.3:87202874-87202893 MS.gene072834:CDS 40.0%
TGCATATGGTGATACAAAGC+TGG - chr3.3:87202009-87202028 MS.gene072834:CDS 40.0%
TGTTCCTCCTTCAGATAACA+TGG - chr3.3:87203539-87203558 MS.gene072834:intron 40.0%
TTGCAAGTGATCAAACCCTA+TGG + chr3.3:87203167-87203186 None:intergenic 40.0%
! AAACACGGAGGTATAGGAAT+AGG - chr3.3:87203357-87203376 MS.gene072834:CDS 40.0%
! AGAGAATGGTAATGACAACG+AGG - chr3.3:87202288-87202307 MS.gene072834:CDS 40.0%
! ATACCTCCGTGTTTTCTTTC+AGG + chr3.3:87203351-87203370 None:intergenic 40.0%
! ATCTGAATTTTCTGCTCCTG+CGG + chr3.3:87202209-87202228 None:intergenic 40.0%
! GAAAGAAAACACGGAGGTAT+AGG - chr3.3:87203351-87203370 MS.gene072834:CDS 40.0%
! GAGTCATGATTTAGGGTCAA+AGG - chr3.3:87200952-87200971 MS.gene072834:intron 40.0%
! GATACAAAGCTGGTGATGAA+AGG - chr3.3:87202019-87202038 MS.gene072834:CDS 40.0%
! GGAGGTATAGGAATAGGATA+TGG - chr3.3:87203363-87203382 MS.gene072834:CDS 40.0%
! TACCTCCGTGTTTTCTTTCA+GGG + chr3.3:87203350-87203369 None:intergenic 40.0%
! TCAGATCCTTTTCACCTAGT+GGG - chr3.3:87202969-87202988 MS.gene072834:CDS 40.0%
! TCCAACTTGTCTCATGGTTT+TGG - chr3.3:87200606-87200625 MS.gene072834:intron 40.0%
! TGTTTGAGATACCGAGACTT+GGG + chr3.3:87203305-87203324 None:intergenic 40.0%
! TTCAGATCCTTTTCACCTAG+TGG - chr3.3:87202968-87202987 MS.gene072834:CDS 40.0%
! TTGTTTGAGATACCGAGACT+TGG + chr3.3:87203306-87203325 None:intergenic 40.0%
! TTTAGCTCCTCTAATCTCAC+AGG + chr3.3:87202079-87202098 None:intergenic 40.0%
!! ACACTCCAACTAGTCTTAAC+GGG - chr3.3:87203008-87203027 MS.gene072834:CDS 40.0%
!! TGCTGGCTTATGATATTAGC+TGG + chr3.3:87203885-87203904 None:intergenic 40.0%
AAGACATACTCCAGTCAGCA+TGG - chr3.3:87204134-87204153 MS.gene072834:intron 45.0%
AAGGACATCGAAAGTTACGG+TGG + chr3.3:87204314-87204333 None:intergenic 45.0%
AAGGTAGGCACGGTGATAAT+TGG - chr3.3:87203445-87203464 MS.gene072834:intron 45.0%
ACCAAGTGATTGGGATCAAG+AGG + chr3.3:87201495-87201514 None:intergenic 45.0%
ACCTCTTGATCCCAATCACT+TGG - chr3.3:87201491-87201510 MS.gene072834:CDS 45.0%
ACCTTCCCGTCATAAGTAAG+TGG - chr3.3:87201852-87201871 MS.gene072834:CDS 45.0%
ACGCACCCTGAAAGAAAACA+CGG - chr3.3:87203342-87203361 MS.gene072834:CDS 45.0%
AGATTGATCTGCACTCCCTA+AGG + chr3.3:87202906-87202925 None:intergenic 45.0%
AGGGAATGCCAATGTCCATA+GGG - chr3.3:87203149-87203168 MS.gene072834:intron 45.0%
ATGCGATAATTACTCCGACG+GGG - chr3.3:87204585-87204604 MS.gene072834:CDS 45.0%
CAGATAATCACAGGCACCAT+GGG + chr3.3:87202050-87202069 None:intergenic 45.0%
CCCATACAAATGAAGCATGC+TGG - chr3.3:87203819-87203838 MS.gene072834:intron 45.0%
CCTTCCCGTCATAAGTAAGT+GGG - chr3.3:87201853-87201872 MS.gene072834:CDS 45.0%
CTCCGTAGATGTCAATACCA+CGG - chr3.3:87200637-87200656 MS.gene072834:intron 45.0%
CTCTCGAATGATTCCTCCTA+GGG - chr3.3:87201458-87201477 MS.gene072834:CDS 45.0%
CTTCCCGTCATAAGTAAGTG+GGG - chr3.3:87201854-87201873 MS.gene072834:CDS 45.0%
GAACTAGAGGTGGCAAAACT+TGG + chr3.3:87203276-87203295 None:intergenic 45.0%
GAAGCCATGTTATCTGAAGG+AGG + chr3.3:87203546-87203565 None:intergenic 45.0%
GATCCCCACTTACTTATGAC+GGG + chr3.3:87201860-87201879 None:intergenic 45.0%
GCTGAAACCTGTGAGATTAG+AGG - chr3.3:87202069-87202088 MS.gene072834:CDS 45.0%
GTCAATACCACGGTCAGATT+CGG - chr3.3:87200647-87200666 MS.gene072834:intron 45.0%
GTCAGGGAGGTAATTGAACT+CGG - chr3.3:87201408-87201427 MS.gene072834:CDS 45.0%
TCAGGATGAAGACGAAGATG+AGG - chr3.3:87202261-87202280 MS.gene072834:CDS 45.0%
TCAGGGAGGTAATTGAACTC+GGG - chr3.3:87201409-87201428 MS.gene072834:CDS 45.0%
TCTCGAATGATTCCTCCTAG+GGG - chr3.3:87201459-87201478 MS.gene072834:CDS 45.0%
TCTCTATGCTGGATCAAGGT+AGG - chr3.3:87203430-87203449 MS.gene072834:CDS 45.0%
TCTCTCGAATGATTCCTCCT+AGG - chr3.3:87201457-87201476 MS.gene072834:CDS 45.0%
TGTAGAGGTAGTACCGTAGT+AGG - chr3.3:87201228-87201247 MS.gene072834:CDS 45.0%
TGTTAATCCTCTGCTCTCGA+GGG - chr3.3:87201341-87201360 MS.gene072834:CDS 45.0%
TTACCTCCCTGACTAAACTC+CGG + chr3.3:87201401-87201420 None:intergenic 45.0%
! ACAAGTTGGATCGTCGTCAA+CGG + chr3.3:87200596-87200615 None:intergenic 45.0%
! ATTCCTTGGGAGTGCATATC+TGG + chr3.3:87203606-87203625 None:intergenic 45.0%
! GTTTGAGATACCGAGACTTG+GGG + chr3.3:87203304-87203323 None:intergenic 45.0%
! TGTGCACATCACTGATTACC+AGG + chr3.3:87201781-87201800 None:intergenic 45.0%
! TTTGAGATACCGAGACTTGG+GGG + chr3.3:87203303-87203322 None:intergenic 45.0%
!! ACTACTTCTGATAGTGGCAG+TGG - chr3.3:87202175-87202194 MS.gene072834:CDS 45.0%
!! GACCGTGGTATTGACATCTA+CGG + chr3.3:87200642-87200661 None:intergenic 45.0%
ACTAGATCCGAATCTGACCG+TGG + chr3.3:87200657-87200676 None:intergenic 50.0%
ACTTGGGGGATGAGAACTAG+AGG + chr3.3:87203289-87203308 None:intergenic 50.0%
AGAACCCGAGCTTGATTCAC+AGG + chr3.3:87201440-87201459 None:intergenic 50.0%
AGGATGGGAAGACCGTAATC+AGG - chr3.3:87203674-87203693 MS.gene072834:intron 50.0%
AGGTGGAGCTAGTTGTTGTC+TGG + chr3.3:87203779-87203798 None:intergenic 50.0%
AGTTCTCATCCCCCAAGTCT+CGG - chr3.3:87203291-87203310 MS.gene072834:intron 50.0%
ATATCTGGCAACGAACCACC+AGG + chr3.3:87203591-87203610 None:intergenic 50.0%
ATCAGCTCAGAAGAAGCCTC+GGG - chr3.3:87202315-87202334 MS.gene072834:intron 50.0%
ATGCTGGATCAAGGTAGGCA+CGG - chr3.3:87203435-87203454 MS.gene072834:intron 50.0%
ATTCCGGAGTTTAGTCAGGG+AGG - chr3.3:87201395-87201414 MS.gene072834:CDS 50.0%
CAAAACTTGGCCGTTGATCC+GGG + chr3.3:87203263-87203282 None:intergenic 50.0%
CACCCTGAAAGAAAACACGG+AGG - chr3.3:87203345-87203364 MS.gene072834:CDS 50.0%
CACGCATTCCGATGGGAAAA+CGG + chr3.3:87200567-87200586 None:intergenic 50.0%
CAGGGAATGCCAATGTCCAT+AGG - chr3.3:87203148-87203167 MS.gene072834:intron 50.0%
CATCAGCTCAGAAGAAGCCT+CGG - chr3.3:87202314-87202333 MS.gene072834:intron 50.0%
CCATGCCCGTTAAGACTAGT+TGG + chr3.3:87203016-87203035 None:intergenic 50.0%
CGACGATCCAACTTGTCTCA+TGG - chr3.3:87200600-87200619 MS.gene072834:intron 50.0%
CGGTCTTCCCATCCTTGAAA+TGG + chr3.3:87203669-87203688 None:intergenic 50.0%
CTAGTATGGTGGCAGCCTTA+GGG - chr3.3:87202888-87202907 MS.gene072834:CDS 50.0%
CTCGAATGATTCCTCCTAGG+GGG - chr3.3:87201460-87201479 MS.gene072834:CDS 50.0%
GACAACAACTAGCTCCACCT+TGG - chr3.3:87203779-87203798 MS.gene072834:intron 50.0%
GAGGCTTCTTCTGAGCTGAT+GGG + chr3.3:87202315-87202334 None:intergenic 50.0%
GCAAAACTTGGCCGTTGATC+CGG + chr3.3:87203264-87203283 None:intergenic 50.0%
GCAGATAATCACAGGCACCA+TGG + chr3.3:87202051-87202070 None:intergenic 50.0%
GGAAAAACGGCACCGTTAAC+TGG + chr3.3:87203750-87203769 None:intergenic 50.0%
GTGTTAATCCTCTGCTCTCG+AGG - chr3.3:87201340-87201359 MS.gene072834:CDS 50.0%
TAACGGGAGTTATGGCTGAC+TGG + chr3.3:87203114-87203133 None:intergenic 50.0%
TCAAGCGACGTACCGTTATC+TGG - chr3.3:87203468-87203487 MS.gene072834:intron 50.0%
TCGAATGATTCCTCCTAGGG+GGG - chr3.3:87201461-87201480 MS.gene072834:CDS 50.0%
TGATGTGCACATGCCTGACA+TGG - chr3.3:87201790-87201809 MS.gene072834:CDS 50.0%
TGTCTGGCCTGGTGGAAAAA+CGG + chr3.3:87203763-87203782 None:intergenic 50.0%
TTCCGCCTGTGAATCAAGCT+CGG - chr3.3:87201432-87201451 MS.gene072834:CDS 50.0%
TTGCCAGATATGCACTCCCA+AGG - chr3.3:87203600-87203619 MS.gene072834:intron 50.0%
! AGAAGAAGCCTCGGGTTGTT+TGG - chr3.3:87202323-87202342 MS.gene072834:intron 50.0%
! CCCACTTACTTATGACGGGA+AGG + chr3.3:87201856-87201875 None:intergenic 50.0%
! CGGGCATGGATTTTCTCCTT+CGG - chr3.3:87203027-87203046 MS.gene072834:CDS 50.0%
! CTGCCACCATACTAGCTTGT+TGG + chr3.3:87202883-87202902 None:intergenic 50.0%
! GGCATGGATTTTCTCCTTCG+GGG - chr3.3:87203029-87203048 MS.gene072834:CDS 50.0%
! GGGCATGGATTTTCTCCTTC+GGG - chr3.3:87203028-87203047 MS.gene072834:CDS 50.0%
!! CCAACTAGTCTTAACGGGCA+TGG - chr3.3:87203013-87203032 MS.gene072834:CDS 50.0%
AATCCTCTGCTCTCGAGGGA+AGG - chr3.3:87201345-87201364 MS.gene072834:CDS 55.0%
ACCCGAGCTTGATTCACAGG+CGG + chr3.3:87201437-87201456 None:intergenic 55.0%
CCTTCGGGGCTTCTTCAGTT+GGG - chr3.3:87203043-87203062 MS.gene072834:CDS 55.0%
CGAGGCTTCTTCTGAGCTGA+TGG + chr3.3:87202316-87202335 None:intergenic 55.0%
CTAGTTGTTGTCTGGCCTGG+TGG + chr3.3:87203771-87203790 None:intergenic 55.0%
CTTCTTTGCCCTTGCAAGCG+GGG - chr3.3:87203562-87203581 MS.gene072834:intron 55.0%
GAGCTAGTTGTTGTCTGGCC+TGG + chr3.3:87203774-87203793 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG + chr3.3:87200574-87200593 None:intergenic 55.0%
GCTAGTATGGTGGCAGCCTT+AGG - chr3.3:87202887-87202906 MS.gene072834:CDS 55.0%
GCTTCTTTGCCCTTGCAAGC+GGG - chr3.3:87203561-87203580 MS.gene072834:intron 55.0%
GGCTTCTTTGCCCTTGCAAG+CGG - chr3.3:87203560-87203579 MS.gene072834:intron 55.0%
GGGGAGGCCTCCTAATATTC+CGG - chr3.3:87201379-87201398 MS.gene072834:CDS 55.0%
GTGCACATGCCTGACATGGA+TGG - chr3.3:87201794-87201813 MS.gene072834:CDS 55.0%
TCCACAGACCAAACAACCCG+AGG + chr3.3:87202334-87202353 None:intergenic 55.0%
TCCGATGGGAAAACGGTCAC+CGG + chr3.3:87200560-87200579 None:intergenic 55.0%
TCCGCCTGTGAATCAAGCTC+GGG - chr3.3:87201433-87201452 MS.gene072834:CDS 55.0%
TCCTTCGGGGCTTCTTCAGT+TGG - chr3.3:87203042-87203061 MS.gene072834:CDS 55.0%
TGGGGGATGAGAACTAGAGG+TGG + chr3.3:87203286-87203305 None:intergenic 55.0%
! GGCGAGTTCAATGATGGGAC+AGG - chr3.3:87203941-87203960 MS.gene072834:intron 55.0%
! TCCGGTGACCGTTTTCCCAT+CGG - chr3.3:87200556-87200575 MS.gene072834:CDS 55.0%
!!! AACGGTGCCGTTTTTCCACC+AGG - chr3.3:87203753-87203772 MS.gene072834:intron 55.0%
ACCAGGATACCCCGCTTGCA+AGG + chr3.3:87203574-87203593 None:intergenic 60.0%
AGAGGTTAAGGAGCCCCCCT+AGG + chr3.3:87201477-87201496 None:intergenic 60.0%
AGGGAAGGACCCCTCTCAAG+GGG - chr3.3:87201360-87201379 MS.gene072834:CDS 60.0%
CCAGGATACCCCGCTTGCAA+GGG + chr3.3:87203573-87203592 None:intergenic 60.0%
CCCAACTGAAGAAGCCCCGA+AGG + chr3.3:87203046-87203065 None:intergenic 60.0%
GAACGTGGCAAGCCATCTCC+AGG - chr3.3:87202732-87202751 MS.gene072834:intron 60.0%
GAGGGAAGGACCCCTCTCAA+GGG - chr3.3:87201359-87201378 MS.gene072834:CDS 60.0%
GGCGAGAACACGCATTCCGA+TGG + chr3.3:87200575-87200594 None:intergenic 60.0%
TAGGAGGCCTCCCCTTGAGA+GGG + chr3.3:87201373-87201392 None:intergenic 60.0%
TTAGGAGGCCTCCCCTTGAG+AGG + chr3.3:87201374-87201393 None:intergenic 60.0%
! GCCTCGGGTTGTTTGGTCTG+TGG - chr3.3:87202330-87202349 MS.gene072834:intron 60.0%
! TTGCAAGCGGGGTATCCTGG+TGG - chr3.3:87203573-87203592 MS.gene072834:intron 60.0%
!! GGCAGTGGACTAAGATCCGC+AGG - chr3.3:87202190-87202209 MS.gene072834:CDS 60.0%
AGGAGGCCTCCCCTTGAGAG+GGG + chr3.3:87201372-87201391 None:intergenic 65.0%
CGAGGGAAGGACCCCTCTCA+AGG - chr3.3:87201358-87201377 MS.gene072834:CDS 65.0%
GAAGGACCCCTCTCAAGGGG+AGG - chr3.3:87201363-87201382 MS.gene072834:CDS 65.0%
GGTCCTTCCCTCGAGAGCAG+AGG + chr3.3:87201351-87201370 None:intergenic 65.0%
GGTTAAGGAGCCCCCCTAGG+AGG + chr3.3:87201474-87201493 None:intergenic 65.0%
! CCCTTGCAAGCGGGGTATCC+TGG - chr3.3:87203570-87203589 MS.gene072834:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 87200547 87204618 87200547 ID=MS.gene072834
chr3.3 mRNA 87200547 87204618 87200547 ID=MS.gene072834.t1;Parent=MS.gene072834
chr3.3 exon 87204507 87204618 87204507 ID=MS.gene072834.t1.exon1;Parent=MS.gene072834.t1
chr3.3 CDS 87204507 87204618 87204507 ID=cds.MS.gene072834.t1;Parent=MS.gene072834.t1
chr3.3 exon 87203299 87203451 87203299 ID=MS.gene072834.t1.exon2;Parent=MS.gene072834.t1
chr3.3 CDS 87203299 87203451 87203299 ID=cds.MS.gene072834.t1;Parent=MS.gene072834.t1
chr3.3 exon 87202765 87203163 87202765 ID=MS.gene072834.t1.exon3;Parent=MS.gene072834.t1
chr3.3 CDS 87202765 87203163 87202765 ID=cds.MS.gene072834.t1;Parent=MS.gene072834.t1
chr3.3 exon 87202412 87202488 87202412 ID=MS.gene072834.t1.exon4;Parent=MS.gene072834.t1
chr3.3 CDS 87202412 87202488 87202412 ID=cds.MS.gene072834.t1;Parent=MS.gene072834.t1
chr3.3 exon 87201995 87202326 87201995 ID=MS.gene072834.t1.exon5;Parent=MS.gene072834.t1
chr3.3 CDS 87201995 87202326 87201995 ID=cds.MS.gene072834.t1;Parent=MS.gene072834.t1
chr3.3 exon 87201203 87201887 87201203 ID=MS.gene072834.t1.exon6;Parent=MS.gene072834.t1
chr3.3 CDS 87201203 87201887 87201203 ID=cds.MS.gene072834.t1;Parent=MS.gene072834.t1
chr3.3 exon 87200547 87200618 87200547 ID=MS.gene072834.t1.exon7;Parent=MS.gene072834.t1
chr3.3 CDS 87200547 87200618 87200547 ID=cds.MS.gene072834.t1;Parent=MS.gene072834.t1
Gene Sequence

>MS.gene072834

ATGGATGATTCCGGTGACCGTTTTCCCATCGGAATGCGTGTTCTCGCCGTTGACGACGATCCAACTTGTCTCATGGTTTTGGAAACTCTTCTCCGTAGATGTCAATACCACGGTCAGATTCGGATCTAGTGTTTTTTATTTTGATTAAAGTTTTCATTTCTATGCTCTATTTATGTGTATAATCAATGTATCATGATAATTCATAAGTCAATGATATGTGTATAGATATGATTAATTTTTTATATTTATTTTTAGTTTATAAGTGTATAATTGCAATTCCAGAAATTCAAATAAAAAAAAACATGTCTTTAGGATCAAATCTAACTGGGAAATGGAGTTAGGTAGAAATTAACGATATTGTGTAGATATTTGGAACTTTTACTAAGAATAAAGGTAAGATGAAAAGAGTCATGATTTAGGGTCAAAGGTTCCAAATTCATAGTGTGTTGACTTATTTTGACTGACTAACTCCCTGTGATAGTATAAAGAAACAATTTTTACAGATTTTATGTGGAGTTTAATCTTATTTCGTCTACGCTTGTAAAAGCAGCGTCTGCATAGATTCTTATATGATAAACACTTATTGAATAATCACTTAATTATGTGCTTGCTTGGGTAATGTATCCAAGCATATTTTTACTAGATATGTGAAGGATATTCCGTAATTAGAGCTTCATTGCTTGTAGAGGTAGTACCGTAGTAGGAAAAGTTGCTCATAGTGCATAATATATTTCATTTTGTTTAGTGGCTTTGGACTGAATATGCACTTTATGGTCAACCATTTTTTGTTTTGGTGTTAATCCTCTGCTCTCGAGGGAAGGACCCCTCTCAAGGGGAGGCCTCCTAATATTCCGGAGTTTAGTCAGGGAGGTAATTGAACTCGGGTTCCGCCTGTGAATCAAGCTCGGGTTCTCTCGAATGATTCCTCCTAGGGGGGCTCCTTAACCTCTTGATCCCAATCACTTGGTTATAGTCAACCATTTTTCTTTTCTTGTCTTTGCTCTTGTAACTGTTGTTGCTTAGATTTCAGGATCCTGTATTTCTTCATGATTAGTAATTTTCTTTGACAAACATTTCACTGTTGCTTTCTTTATTGGATGTATATTGTAAATATGATGTGAACTTTGCTTATTCAAAGTGATACTTATTTCTGATTGGGGATTGCAGTAACCACAACTAGTCAAGCAATAACAGCGTTGACCATGTTGAGAGAAAACAAAGACAAGTTTGACCTGGTAATCAGTGATGTGCACATGCCTGACATGGATGGATTTAAGCTGCTTGAACTTGTGGGACTTGAAATGGACCTTCCCGTCATAAGTAAGTGGGGATCTGTCATGTAATCCTCAGCTGTTAATTTTTTTCTTCCTTTTCTATTTATTCATTTTGACTCTTGTTTATTGGTACGACTGCTAATCAATGATACTTTTGCTGTTATAAAATGTTTGATTTCAGTGTTGTCTGCATATGGTGATACAAAGCTGGTGATGAAAGGAATTTCCCATGGTGCCTGTGATTATCTGCTGAAACCTGTGAGATTAGAGGAGCTAAAGAACATTTGGCAGCATGTAATTAGGAAGAAGAAGTCTGATCCAAAGGAGAAAAACAAAACCAGTAAACCAGACAAAACTACTTCTGATAGTGGCAGTGGACTAAGATCCGCAGGAGCAGAAAATTCAGATGAAAATGGAAAGCTGACTAAGAAAAGAAAGGATCAGGATGAAGACGAAGATGAGGATAAAGAGAATGGTAATGACAACGAGGACCCATCAGCTCAGAAGAAGCCTCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAGTATGTTCTTCACTCTGCCTGCAACACAAACAATTTTTATATCTTATCAATTTCCTCGAGCTTTACTGAATTTTATTTCAAATTTTACATTATCAAAATGTTTTTGAATATCTGGTTCGATGTTTATTTTAAATCCTAGGTTTAAAATGACTTATGATGATAGATGCCACTTGGGATGAATTTCATTTCTGAATCATCACTCAAATTTAAGCCATGTCATAAAGTATTCCATTACTGAATTTGAGTATTATGTTAATAATGTTGTTTTACTTGCAGAGGCTGTGCCCAAAAAAATTCTTGATATGATGAATGTCGAAAATATCACAAGGGAGAACGTGGCAAGCCATCTCCAGGTATTTTTCTAGTTCTTTACACTTTAATTTATGTAAGTTAACCATTTCTTTCACTGAATGTTTCGGGTTTATGAAATGGCTGCAGAAGTATAGACTTTATCTGAAAAGAATTAGCTGTGTTGCAAACCAACAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAATCTTATTTGAGAATGGGTGGTTCTGGACATTTTCACAATAATGCTTTCAGATCCTTTTCACCTAGTGGGATAATTGGTAATCTGAACACTCCAACTAGTCTTAACGGGCATGGATTTTCTCCTTCGGGGCTTCTTCAGTTGGGCCAATCACGTAATTTAAACAATTCTTCCAATGATCAACTTAAATTCCAGTCAGCCATAACTCCCGTTAATCAGAATATTCTTCAGGGAATGCCAATGTCCATAGGGTTTGATCACTTGCAAAACAGCAAGGGTGTTATCTCTGTTCAAAACCTGAATACTGATGTGAAAACAACTTTTCCCATCCAAATAAATTCCCGGATCAACGGCCAAGTTTTGCCACCTCTAGTTCTCATCCCCCAAGTCTCGGTATCTCAAACAATGGCTTGATGTCGGATACGCACCCTGAAAGAAAACACGGAGGTATAGGAATAGGATATGGAAGTTCATCTTCTTCAGTAGCCTCTCAACATTCAGAATTTTCTTTCTCTATGCTGGATCAAGGTAGGCACGGTGATAATTGGTCAAGCGACGTACCGTTATCTGGAATCCAAACAAATTCTTTCTCTTCAAGTGAATGTTTTAGACAGACAGCTGTTCCTCCTTCAGATAACATGGCTTCTTTGCCCTTGCAAGCGGGGTATCCTGGTGGTTCGTTGCCAGATATGCACTCCCAAGGAATGATTTTTACTAATTCACCTGAGTATATAAACGGTAATTTGCCATTTCAAGGATGGGAAGACCGTAATCAGGATGCTACTTACCACTCAAATGTTACTTGTGGATCAATGAACTCTCTTGCTCCAGTTAACGGTGCCGTTTTTCCACCAGGCCAGACAACAACTAGCTCCACCTTGGATACTAAATTTTTTAATCCCATACAAATGAAGCATGCTGGATTTGCCGAGTTAACTGAATGCAGCTCATCAAGACAATCTCCAGCTAATATCATAAGCCAGCAGAAGTTTTCTAATAATCTTGGTTCACTGGAATACTTGGCGAGTTCAATGATGGGACAGGTAATAACATTTTTTGAATATAATGTTGGTTTTCCCATAAATGCTTCTGTATGGCTTCTTTAACATGTATAGTTTTTTTTGCATATGGTTGATACTTGATACCATCTCAAACATTATTTCCTTGACCACACATACTGATTAGATTATAAAAGTACAATCAGTAGCTTTAGAAAGACATACTCCAGTCAGCATGGTTATATTTGTCTTATTCCCGAGAGAAGACTTAAAATCATTACATTGTCAGCATTGAAATTTGAAGATTTAAATTGGTGGAACTCTGTATTGTTGAAACTTTACGAGCCATATATTTCATTGATGTTCTTTGTGATGGATCTGCTAGCCAATTAACCACCGTAACTTTCGATGTCCTTTAGAACATTCACATAGGATGAAAACATTTGTTTTTCTATCCTGGATTGGTACAATAACTTGTCCGTTGAGTATATAGCATGTTGTTTTATTTAACTTAGGTTTAGCATCTTTAAAGTATGCAATGCTCGTTTGGTTGCTGTATCTTGTTTCTTGCCCCTTGTCCTAAATATTTTGCTTCCATAGTAATTTGATACCATGTTCATGACATGCAGGAGCAAGATAAGATGAAATTATTGGGTGGAGACTTCATATGCGATAATTACTCCGACGGGGTATCTTTGTGA
Protein sequence

>MS.gene072834.t1

MDDSGDRFPIGMRVLAVDDDPTCLMVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQHVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAFRSFSPSGIIGNLNTPTSLNGHGFSPSGLLQLGQSRNLNNSSNDQLKFQSAITPVNQNILQGMPMSIGFATSSSHPPSLGISNNGLMSDTHPERKHGGIGIGYGSSSSSVASQHSEFSFSMLDQGRHGDNWSSDVPLSGIQTNSFSSSECFRQTAVPPSDNMASLPLQAGYPGGSLPDMHSQGMIFTNSPEYINGNLPFQGWEDRNQDATYHSNVTCGSMNSLAPVNGAVFPPGQTTTSSTLDTKFFNPIQMKHAGFAELTECSSSRQSPANIISQQKFSNNLGSLEYLASSMMGQEQDKMKLLGGDFICDNYSDGVSL