Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059061.t1 | XP_013463155.1 | 97.8 | 452 | 10 | 0 | 1 | 452 | 1 | 452 | 3.30E-257 | 897.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059061.t1 | A7PZL3 | 46.6 | 442 | 235 | 1 | 1 | 441 | 27 | 468 | 3.2e-115 | 416.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059061.t1 | A0A072VG66 | 97.8 | 452 | 10 | 0 | 1 | 452 | 1 | 452 | 2.4e-257 | 897.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052289 | MS.gene059061 | 0.820851 | 5.51E-53 | -1.69E-46 |
| MS.gene052774 | MS.gene059061 | 0.877213 | 7.53E-69 | -1.69E-46 |
| MS.gene059061 | MS.gene059890 | 0.825503 | 4.52E-54 | -1.69E-46 |
| MS.gene059061 | MS.gene065896 | 0.860555 | 1.90E-63 | -1.69E-46 |
| MS.gene059061 | MS.gene07040 | 0.836442 | 9.34E-57 | -1.69E-46 |
| MS.gene059061 | MS.gene071517 | -0.811398 | 7.14E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene071518 | -0.807165 | 5.77E-50 | -1.69E-46 |
| MS.gene059061 | MS.gene071519 | -0.812483 | 4.14E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene071859 | 0.989704 | 2.81E-179 | -1.69E-46 |
| MS.gene059061 | MS.gene072376 | 0.811571 | 6.55E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene072834 | 0.813427 | 2.57E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene072837 | 0.820121 | 8.11E-53 | -1.69E-46 |
| MS.gene059061 | MS.gene20141 | 0.800675 | 1.29E-48 | -1.69E-46 |
| MS.gene059061 | MS.gene21094 | -0.808393 | 3.17E-50 | -1.69E-46 |
| MS.gene059061 | MS.gene21238 | -0.816569 | 5.17E-52 | -1.69E-46 |
| MS.gene059061 | MS.gene23930 | 0.810434 | 1.15E-50 | -1.69E-46 |
| MS.gene059061 | MS.gene25023 | 0.842594 | 2.35E-58 | -1.69E-46 |
| MS.gene059061 | MS.gene25647 | 0.805657 | 1.20E-49 | -1.69E-46 |
| MS.gene059061 | MS.gene28800 | 0.836131 | 1.12E-56 | -1.69E-46 |
| MS.gene059061 | MS.gene28940 | 0.821359 | 4.21E-53 | -1.69E-46 |
| MS.gene059061 | MS.gene30844 | -0.803374 | 3.59E-49 | -1.69E-46 |
| MS.gene059061 | MS.gene32684 | 0.820944 | 5.25E-53 | -1.69E-46 |
| MS.gene059061 | MS.gene32882 | 0.805283 | 1.44E-49 | -1.69E-46 |
| MS.gene059061 | MS.gene33467 | 0.887601 | 1.24E-72 | -1.69E-46 |
| MS.gene059061 | MS.gene37489 | 0.812561 | 3.98E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene38133 | 0.873331 | 1.60E-67 | -1.69E-46 |
| MS.gene059061 | MS.gene46719 | 0.826005 | 3.44E-54 | -1.69E-46 |
| MS.gene059061 | MS.gene49445 | 0.8167 | 4.83E-52 | -1.69E-46 |
| MS.gene059061 | MS.gene56074 | -0.811337 | 7.36E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene56402 | -0.813621 | 2.33E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene56818 | 0.873728 | 1.17E-67 | -1.69E-46 |
| MS.gene059061 | MS.gene61774 | 0.804724 | 1.88E-49 | -1.69E-46 |
| MS.gene059061 | MS.gene62631 | 0.863703 | 2.06E-64 | -1.69E-46 |
| MS.gene059061 | MS.gene64394 | 0.847884 | 8.72E-60 | -1.69E-46 |
| MS.gene059061 | MS.gene64944 | 0.866699 | 2.36E-65 | -1.69E-46 |
| MS.gene059061 | MS.gene66921 | 0.818597 | 1.80E-52 | -1.69E-46 |
| MS.gene059061 | MS.gene67341 | 0.984161 | 9.20E-160 | -1.69E-46 |
| MS.gene059061 | MS.gene70272 | 0.804035 | 2.62E-49 | -1.69E-46 |
| MS.gene059061 | MS.gene71912 | 0.8039 | 2.80E-49 | -1.69E-46 |
| MS.gene059061 | MS.gene75654 | 0.863529 | 2.33E-64 | -1.69E-46 |
| MS.gene059061 | MS.gene75804 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene059061 | MS.gene77555 | 0.862453 | 5.01E-64 | -1.69E-46 |
| MS.gene059061 | MS.gene77556 | 0.811009 | 8.67E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene79320 | -0.810881 | 9.25E-51 | -1.69E-46 |
| MS.gene059061 | MS.gene79911 | 0.818895 | 1.54E-52 | -1.69E-46 |
| MS.gene059061 | MS.gene79912 | 0.856035 | 4.22E-62 | -1.69E-46 |
| MS.gene059061 | MS.gene81056 | 0.850738 | 1.40E-60 | -1.69E-46 |
| MS.gene059061 | MS.gene83325 | 0.858723 | 6.77E-63 | -1.69E-46 |
| MS.gene059061 | MS.gene86751 | 0.831284 | 1.82E-55 | -1.69E-46 |
| MS.gene059061 | MS.gene87467 | -0.804417 | 2.18E-49 | -1.69E-46 |
| MS.gene059061 | MS.gene88364 | 0.80789 | 4.05E-50 | -1.69E-46 |
| MS.gene059061 | MS.gene95302 | -0.802899 | 4.51E-49 | -1.69E-46 |
| MS.gene059061 | MS.gene98307 | 0.817938 | 2.54E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059061.t1 | MTR_2g435340 | 97.788 | 452 | 10 | 0 | 1 | 452 | 1 | 452 | 0.0 | 902 |
| MS.gene059061.t1 | MTR_2g435340 | 96.830 | 347 | 11 | 0 | 106 | 452 | 41 | 387 | 0.0 | 677 |
| MS.gene059061.t1 | MTR_4g120730 | 72.851 | 442 | 117 | 2 | 12 | 451 | 13 | 453 | 0.0 | 660 |
| MS.gene059061.t1 | MTR_7g110710 | 52.318 | 453 | 206 | 5 | 2 | 449 | 7 | 454 | 9.64e-168 | 480 |
| MS.gene059061.t1 | MTR_7g110710 | 52.318 | 453 | 206 | 5 | 2 | 449 | 7 | 454 | 1.34e-167 | 479 |
| MS.gene059061.t1 | MTR_1g086030 | 57.071 | 396 | 167 | 2 | 33 | 428 | 78 | 470 | 1.34e-162 | 469 |
| MS.gene059061.t1 | MTR_8g098840 | 50.761 | 394 | 193 | 1 | 33 | 425 | 40 | 433 | 1.08e-146 | 427 |
| MS.gene059061.t1 | MTR_7g088550 | 48.592 | 426 | 214 | 3 | 8 | 428 | 20 | 445 | 1.03e-145 | 424 |
| MS.gene059061.t1 | MTR_1g100050 | 47.319 | 429 | 224 | 2 | 2 | 428 | 14 | 442 | 2.09e-144 | 421 |
| MS.gene059061.t1 | MTR_1g100060 | 48.662 | 411 | 206 | 2 | 23 | 428 | 75 | 485 | 2.78e-141 | 414 |
| MS.gene059061.t1 | MTR_1g099850 | 49.874 | 397 | 198 | 1 | 33 | 428 | 51 | 447 | 4.77e-141 | 412 |
| MS.gene059061.t1 | MTR_3g449590 | 49.395 | 413 | 195 | 4 | 33 | 439 | 43 | 447 | 7.59e-140 | 409 |
| MS.gene059061.t1 | MTR_1g100040 | 48.139 | 403 | 208 | 1 | 28 | 429 | 47 | 449 | 3.42e-139 | 408 |
| MS.gene059061.t1 | MTR_7g078680 | 46.098 | 410 | 220 | 1 | 33 | 441 | 51 | 460 | 5.06e-136 | 400 |
| MS.gene059061.t1 | MTR_8g028725 | 43.750 | 464 | 249 | 3 | 1 | 452 | 16 | 479 | 2.45e-134 | 395 |
| MS.gene059061.t1 | MTR_5g090160 | 49.752 | 404 | 196 | 4 | 30 | 428 | 37 | 438 | 3.92e-129 | 381 |
| MS.gene059061.t1 | MTR_3g096330 | 48.786 | 412 | 207 | 2 | 32 | 443 | 71 | 478 | 4.62e-129 | 392 |
| MS.gene059061.t1 | MTR_4g124980 | 42.995 | 414 | 231 | 3 | 17 | 428 | 57 | 467 | 1.30e-124 | 371 |
| MS.gene059061.t1 | MTR_2g042740 | 44.417 | 403 | 220 | 3 | 28 | 428 | 49 | 449 | 1.02e-122 | 365 |
| MS.gene059061.t1 | MTR_1g086030 | 51.183 | 338 | 162 | 2 | 91 | 428 | 32 | 366 | 1.12e-120 | 358 |
| MS.gene059061.t1 | MTR_2g083670 | 52.273 | 220 | 90 | 1 | 24 | 243 | 27 | 231 | 6.93e-71 | 224 |
| MS.gene059061.t1 | MTR_6g048610 | 35.503 | 169 | 72 | 2 | 230 | 398 | 24 | 155 | 7.77e-28 | 108 |
| MS.gene059061.t1 | MTR_2g042750 | 41.722 | 151 | 77 | 3 | 33 | 181 | 117 | 258 | 3.41e-26 | 108 |
| MS.gene059061.t1 | MTR_8g065030 | 24.450 | 409 | 268 | 14 | 37 | 436 | 65 | 441 | 4.52e-21 | 95.9 |
| MS.gene059061.t1 | MTR_7g092470 | 27.529 | 425 | 235 | 17 | 30 | 428 | 41 | 418 | 1.18e-20 | 94.7 |
| MS.gene059061.t1 | MTR_6g005630 | 26.498 | 317 | 194 | 10 | 29 | 339 | 37 | 320 | 2.19e-20 | 93.6 |
| MS.gene059061.t1 | MTR_6g028080 | 24.939 | 413 | 253 | 15 | 33 | 428 | 27 | 399 | 8.73e-20 | 91.3 |
| MS.gene059061.t1 | MTR_5g043350 | 26.220 | 328 | 186 | 10 | 38 | 348 | 30 | 318 | 8.09e-19 | 88.6 |
| MS.gene059061.t1 | MTR_3g084380 | 25.201 | 373 | 224 | 11 | 39 | 398 | 23 | 353 | 2.43e-18 | 87.0 |
| MS.gene059061.t1 | MTR_5g033680 | 25.153 | 326 | 194 | 11 | 28 | 335 | 47 | 340 | 3.19e-18 | 87.0 |
| MS.gene059061.t1 | MTR_5g090140 | 34.426 | 183 | 77 | 6 | 250 | 428 | 1 | 144 | 5.41e-18 | 81.3 |
| MS.gene059061.t1 | MTR_6g005630 | 25.633 | 316 | 175 | 10 | 29 | 339 | 37 | 297 | 1.11e-16 | 82.0 |
| MS.gene059061.t1 | MTR_1g052315 | 21.446 | 415 | 260 | 12 | 23 | 413 | 46 | 418 | 1.13e-16 | 82.4 |
| MS.gene059061.t1 | MTR_8g010040 | 26.712 | 438 | 248 | 17 | 2 | 423 | 4 | 384 | 1.40e-15 | 78.6 |
| MS.gene059061.t1 | MTR_8g010080 | 24.919 | 309 | 185 | 9 | 39 | 339 | 33 | 302 | 2.31e-15 | 77.8 |
| MS.gene059061.t1 | MTR_5g034090 | 23.864 | 352 | 194 | 10 | 28 | 339 | 110 | 427 | 2.58e-15 | 78.6 |
| MS.gene059061.t1 | MTR_3g054320 | 24.372 | 398 | 245 | 12 | 39 | 422 | 32 | 387 | 2.66e-15 | 77.8 |
| MS.gene059061.t1 | MTR_8g077320 | 28.718 | 195 | 126 | 4 | 150 | 339 | 110 | 296 | 3.49e-15 | 77.0 |
| MS.gene059061.t1 | MTR_1g012390 | 25.307 | 407 | 246 | 15 | 35 | 424 | 26 | 391 | 1.25e-14 | 75.9 |
| MS.gene059061.t1 | MTR_7g091840 | 23.824 | 319 | 186 | 9 | 39 | 339 | 67 | 346 | 1.29e-14 | 75.5 |
| MS.gene059061.t1 | MTR_4g084050 | 24.252 | 301 | 187 | 10 | 38 | 330 | 24 | 291 | 1.36e-14 | 75.5 |
| MS.gene059061.t1 | MTR_1g086390 | 26.019 | 319 | 191 | 10 | 37 | 339 | 81 | 370 | 1.78e-14 | 75.9 |
| MS.gene059061.t1 | MTR_2g060350 | 23.273 | 275 | 187 | 4 | 150 | 413 | 168 | 429 | 2.27e-14 | 75.1 |
| MS.gene059061.t1 | MTR_4g094715 | 27.492 | 331 | 185 | 13 | 31 | 339 | 55 | 352 | 3.38e-14 | 74.7 |
| MS.gene059061.t1 | MTR_7g091850 | 24.060 | 399 | 238 | 12 | 37 | 413 | 76 | 431 | 8.65e-14 | 73.6 |
| MS.gene059061.t1 | MTR_7g035415 | 25.588 | 340 | 195 | 11 | 23 | 347 | 26 | 322 | 1.91e-13 | 71.6 |
| MS.gene059061.t1 | MTR_8g008765 | 22.946 | 353 | 200 | 11 | 39 | 375 | 33 | 329 | 1.08e-12 | 69.3 |
| MS.gene059061.t1 | MTR_8g010090 | 22.613 | 398 | 246 | 12 | 39 | 422 | 33 | 382 | 1.42e-12 | 69.3 |
| MS.gene059061.t1 | MTR_3g084360 | 23.961 | 409 | 250 | 14 | 36 | 425 | 23 | 389 | 1.45e-12 | 69.3 |
| MS.gene059061.t1 | MTR_8g010110 | 24.194 | 310 | 187 | 9 | 39 | 339 | 33 | 303 | 1.69e-12 | 69.3 |
| MS.gene059061.t1 | MTR_2g103410 | 28.643 | 199 | 118 | 5 | 150 | 339 | 157 | 340 | 3.81e-12 | 68.6 |
| MS.gene059061.t1 | MTR_2g049400 | 24.444 | 405 | 250 | 14 | 36 | 425 | 27 | 390 | 6.61e-12 | 67.4 |
| MS.gene059061.t1 | MTR_3g030540 | 23.003 | 313 | 210 | 7 | 116 | 413 | 127 | 423 | 2.29e-11 | 65.9 |
| MS.gene059061.t1 | MTR_8g010070 | 25.962 | 312 | 180 | 12 | 39 | 339 | 33 | 304 | 3.02e-11 | 65.5 |
| MS.gene059061.t1 | MTR_4g120320 | 24.242 | 363 | 216 | 12 | 2 | 339 | 7 | 335 | 4.92e-11 | 64.7 |
| MS.gene059061.t1 | MTR_2g032710 | 25.225 | 333 | 196 | 12 | 27 | 340 | 57 | 355 | 8.61e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059061.t1 | AT3G16850 | 63.946 | 441 | 152 | 3 | 1 | 440 | 3 | 437 | 0.0 | 583 |
| MS.gene059061.t1 | AT3G06770 | 63.636 | 440 | 154 | 3 | 1 | 434 | 1 | 440 | 0.0 | 565 |
| MS.gene059061.t1 | AT3G06770 | 63.699 | 438 | 153 | 3 | 3 | 434 | 4 | 441 | 0.0 | 564 |
| MS.gene059061.t1 | AT5G49215 | 65.617 | 413 | 140 | 2 | 18 | 428 | 24 | 436 | 0.0 | 551 |
| MS.gene059061.t1 | AT5G49215 | 65.617 | 413 | 140 | 2 | 18 | 428 | 22 | 434 | 0.0 | 551 |
| MS.gene059061.t1 | AT3G06770 | 65.135 | 370 | 129 | 0 | 65 | 434 | 2 | 371 | 2.65e-175 | 496 |
| MS.gene059061.t1 | AT3G06770 | 65.135 | 370 | 129 | 0 | 65 | 434 | 2 | 371 | 2.65e-175 | 496 |
| MS.gene059061.t1 | AT3G62110 | 53.596 | 431 | 197 | 3 | 1 | 428 | 6 | 436 | 1.12e-166 | 478 |
| MS.gene059061.t1 | AT3G62110 | 53.596 | 431 | 197 | 3 | 1 | 428 | 6 | 436 | 1.12e-166 | 478 |
| MS.gene059061.t1 | AT3G06770 | 60.704 | 341 | 134 | 0 | 94 | 434 | 13 | 353 | 3.14e-146 | 421 |
| MS.gene059061.t1 | AT3G48950 | 49.626 | 401 | 200 | 2 | 30 | 428 | 38 | 438 | 6.11e-146 | 425 |
| MS.gene059061.t1 | AT4G23820 | 48.492 | 431 | 212 | 3 | 3 | 428 | 6 | 431 | 1.62e-142 | 415 |
| MS.gene059061.t1 | AT4G23500 | 50.378 | 397 | 196 | 1 | 33 | 428 | 64 | 460 | 1.31e-141 | 415 |
| MS.gene059061.t1 | AT3G61490 | 44.700 | 434 | 234 | 2 | 1 | 428 | 4 | 437 | 4.27e-137 | 402 |
| MS.gene059061.t1 | AT3G61490 | 44.700 | 434 | 234 | 2 | 1 | 428 | 4 | 437 | 4.27e-137 | 402 |
| MS.gene059061.t1 | AT3G61490 | 44.700 | 434 | 234 | 2 | 1 | 428 | 4 | 437 | 4.27e-137 | 402 |
| MS.gene059061.t1 | AT3G61490 | 44.700 | 434 | 234 | 2 | 1 | 428 | 19 | 452 | 7.64e-137 | 402 |
| MS.gene059061.t1 | AT3G61490 | 44.700 | 434 | 234 | 2 | 1 | 428 | 117 | 550 | 7.25e-136 | 403 |
| MS.gene059061.t1 | AT2G23900 | 46.618 | 414 | 217 | 3 | 30 | 441 | 49 | 460 | 1.66e-132 | 391 |
| MS.gene059061.t1 | AT4G33440 | 47.529 | 425 | 220 | 2 | 18 | 440 | 51 | 474 | 5.02e-132 | 389 |
| MS.gene059061.t1 | AT5G41870 | 46.420 | 433 | 220 | 5 | 1 | 428 | 10 | 435 | 7.63e-130 | 383 |
| MS.gene059061.t1 | AT3G42950 | 41.191 | 403 | 233 | 3 | 28 | 428 | 59 | 459 | 2.21e-116 | 350 |
| MS.gene059061.t1 | AT1G19170 | 42.169 | 415 | 235 | 4 | 17 | 428 | 69 | 481 | 3.47e-114 | 345 |
| MS.gene059061.t1 | AT3G15720 | 27.470 | 415 | 251 | 16 | 35 | 436 | 22 | 399 | 6.08e-24 | 104 |
| MS.gene059061.t1 | AT3G15720 | 27.470 | 415 | 251 | 16 | 35 | 436 | 21 | 398 | 6.33e-24 | 104 |
| MS.gene059061.t1 | AT3G15720 | 27.470 | 415 | 248 | 17 | 35 | 436 | 21 | 395 | 3.78e-22 | 99.0 |
| MS.gene059061.t1 | AT1G70500 | 25.628 | 398 | 248 | 13 | 37 | 421 | 67 | 429 | 5.07e-21 | 95.9 |
| MS.gene059061.t1 | AT1G23460 | 25.564 | 399 | 247 | 15 | 37 | 421 | 43 | 405 | 6.21e-21 | 95.1 |
| MS.gene059061.t1 | AT1G23460 | 25.313 | 399 | 248 | 14 | 37 | 421 | 67 | 429 | 7.61e-21 | 95.1 |
| MS.gene059061.t1 | AT2G41850 | 26.434 | 401 | 248 | 13 | 34 | 423 | 65 | 429 | 9.32e-21 | 94.7 |
| MS.gene059061.t1 | AT3G57510 | 25.455 | 385 | 234 | 12 | 36 | 404 | 67 | 414 | 2.18e-20 | 93.6 |
| MS.gene059061.t1 | AT3G15720 | 27.922 | 308 | 191 | 10 | 140 | 436 | 48 | 335 | 5.82e-20 | 92.0 |
| MS.gene059061.t1 | AT3G57790 | 27.134 | 328 | 176 | 11 | 36 | 336 | 34 | 325 | 6.29e-18 | 86.7 |
| MS.gene059061.t1 | AT3G57790 | 27.134 | 328 | 176 | 11 | 36 | 336 | 34 | 325 | 6.29e-18 | 86.7 |
| MS.gene059061.t1 | AT3G26610 | 25.240 | 313 | 193 | 9 | 38 | 339 | 68 | 350 | 9.46e-17 | 82.8 |
| MS.gene059061.t1 | AT5G14650 | 24.601 | 313 | 193 | 10 | 36 | 339 | 50 | 328 | 1.13e-16 | 82.4 |
| MS.gene059061.t1 | AT5G17200 | 25.987 | 304 | 178 | 8 | 37 | 332 | 39 | 303 | 1.18e-16 | 82.0 |
| MS.gene059061.t1 | AT1G48100 | 28.037 | 321 | 176 | 14 | 39 | 339 | 82 | 367 | 4.83e-16 | 80.5 |
| MS.gene059061.t1 | AT3G07970 | 26.545 | 275 | 176 | 6 | 150 | 413 | 167 | 426 | 5.60e-16 | 80.1 |
| MS.gene059061.t1 | AT1G56710 | 25.625 | 320 | 197 | 9 | 34 | 339 | 45 | 337 | 3.92e-15 | 77.8 |
| MS.gene059061.t1 | AT2G15470 | 25.610 | 410 | 254 | 15 | 33 | 425 | 27 | 402 | 2.49e-14 | 75.1 |
| MS.gene059061.t1 | AT1G02790 | 26.074 | 349 | 212 | 11 | 34 | 375 | 49 | 358 | 1.17e-13 | 73.2 |
| MS.gene059061.t1 | AT1G02460 | 25.857 | 321 | 190 | 12 | 38 | 339 | 90 | 381 | 1.45e-13 | 73.2 |
| MS.gene059061.t1 | AT2G43860 | 24.939 | 409 | 253 | 16 | 32 | 425 | 28 | 397 | 2.18e-13 | 72.0 |
| MS.gene059061.t1 | AT2G15460 | 25.686 | 401 | 248 | 14 | 33 | 417 | 27 | 393 | 2.89e-13 | 71.6 |
| MS.gene059061.t1 | AT3G59850 | 23.821 | 403 | 255 | 13 | 35 | 424 | 21 | 384 | 3.64e-13 | 71.2 |
| MS.gene059061.t1 | AT2G43870 | 24.868 | 378 | 233 | 11 | 35 | 399 | 19 | 358 | 4.38e-13 | 70.9 |
| MS.gene059061.t1 | AT3G59850 | 23.441 | 401 | 259 | 11 | 35 | 424 | 65 | 428 | 6.26e-13 | 70.9 |
| MS.gene059061.t1 | AT2G15450 | 25.245 | 408 | 255 | 14 | 33 | 424 | 27 | 400 | 6.85e-13 | 70.5 |
| MS.gene059061.t1 | AT1G17150 | 24.331 | 411 | 251 | 13 | 33 | 424 | 29 | 398 | 9.05e-13 | 70.1 |
| MS.gene059061.t1 | AT5G14650 | 26.009 | 223 | 139 | 7 | 36 | 253 | 50 | 251 | 2.60e-12 | 68.2 |
| MS.gene059061.t1 | AT2G43880 | 23.383 | 402 | 258 | 15 | 36 | 425 | 30 | 393 | 2.64e-12 | 68.6 |
| MS.gene059061.t1 | AT1G43080 | 23.133 | 415 | 262 | 16 | 33 | 427 | 27 | 404 | 3.44e-12 | 68.6 |
| MS.gene059061.t1 | AT1G80170 | 24.213 | 413 | 258 | 14 | 33 | 425 | 46 | 423 | 3.88e-12 | 68.6 |
| MS.gene059061.t1 | AT2G40310 | 24.455 | 413 | 255 | 16 | 33 | 425 | 27 | 402 | 6.21e-12 | 67.4 |
| MS.gene059061.t1 | AT4G13760 | 24.578 | 415 | 252 | 16 | 33 | 425 | 27 | 402 | 2.79e-11 | 65.5 |
| MS.gene059061.t1 | AT1G43100 | 23.134 | 402 | 253 | 15 | 33 | 415 | 27 | 391 | 3.30e-11 | 65.5 |
| MS.gene059061.t1 | AT1G43090 | 23.134 | 402 | 253 | 15 | 33 | 415 | 27 | 391 | 3.98e-11 | 65.1 |
| MS.gene059061.t1 | AT4G01890 | 25.000 | 328 | 182 | 12 | 39 | 339 | 67 | 357 | 5.49e-11 | 64.7 |
| MS.gene059061.t1 | AT3G14040 | 25.329 | 304 | 210 | 9 | 135 | 431 | 150 | 443 | 8.95e-11 | 64.3 |
Find 105 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCGTTTCTTCAAGTAAA+TGG | 0.088505 | 2.4:+55834287 | MS.gene059061:CDS |
| AGCAATGCCGTGAATGTTTA+TGG | 0.195198 | 2.4:+55831948 | MS.gene059061:CDS |
| ATGTCGTTTGAATCCTAAAT+TGG | 0.263811 | 2.4:+55831983 | MS.gene059061:CDS |
| ATTGAAGCTTTACCTTCTTA+TGG | 0.264280 | 2.4:+55832787 | MS.gene059061:CDS |
| GGTACTATACCGGCAGTATA+AGG | 0.271970 | 2.4:-55833298 | None:intergenic |
| ATTTCAGCTAAAGGTAATTC+TGG | 0.272185 | 2.4:+55834100 | MS.gene059061:CDS |
| TGCAAAAGTGGAAGTGCTTT+TGG | 0.294030 | 2.4:-55834148 | None:intergenic |
| ATTATTTACCTGCAATAAAC+AGG | 0.300438 | 2.4:-55833148 | None:intergenic |
| AGTGTCTCTATATTGGAATT+TGG | 0.306110 | 2.4:+55832020 | MS.gene059061:CDS |
| CCACCAGGAAACTGGCTTAC+TGG | 0.322724 | 2.4:+55832143 | MS.gene059061:CDS |
| TATGTAACCACCTCTTCCTT+TGG | 0.328460 | 2.4:-55834029 | None:intergenic |
| TGAGATAGAAAATTGCATTC+TGG | 0.331713 | 2.4:-55832082 | None:intergenic |
| TGTGGCCTAGGATCCAATTT+AGG | 0.332220 | 2.4:-55831996 | None:intergenic |
| GATCAGTACGGCATTAAATA+TGG | 0.336655 | 2.4:+55833848 | MS.gene059061:CDS |
| GCCACACAGTGTCTCTATAT+TGG | 0.338491 | 2.4:+55832013 | MS.gene059061:CDS |
| TTGGAAGATGTGGTCATAAC+AGG | 0.339246 | 2.4:+55832865 | MS.gene059061:CDS |
| CCGGCAGTATAAGGGGATTC+TGG | 0.339380 | 2.4:-55833289 | None:intergenic |
| GTTCATCTTCGTGCATTTAC+CGG | 0.342309 | 2.4:+55833902 | MS.gene059061:CDS |
| TCTCAAGTCATTTGCTGATA+AGG | 0.351226 | 2.4:+55832100 | MS.gene059061:CDS |
| ACCGGCTCTGCTATTTCATT+TGG | 0.351598 | 2.4:+55833920 | MS.gene059061:CDS |
| GGAAAGAATATCACAATTGC+TGG | 0.353969 | 2.4:+55834196 | MS.gene059061:CDS |
| AAATGTTAACATGCTCTATC+AGG | 0.358232 | 2.4:-55833973 | None:intergenic |
| GGCAATAATGGAACCATTGA+TGG | 0.360386 | 2.4:+55832986 | MS.gene059061:intron |
| GTACTATACCGGCAGTATAA+GGG | 0.366594 | 2.4:-55833297 | None:intergenic |
| TTTGGATCAAATTTGTCATC+AGG | 0.370603 | 2.4:-55834130 | None:intergenic |
| ATGGAATGGTTTGGTGGGAC+TGG | 0.373444 | 2.4:+55833011 | MS.gene059061:CDS |
| GATGAGGACGACTGTGGTTA+AGG | 0.378902 | 2.4:-55833048 | None:intergenic |
| TCTATGTGCCACCAGGAAAC+TGG | 0.379700 | 2.4:+55832135 | MS.gene059061:CDS |
| TGCTTTATCACACATAGAAA+TGG | 0.384138 | 2.4:+55834060 | MS.gene059061:CDS |
| TTCCGTTTCTTCAAGTAAAT+GGG | 0.384317 | 2.4:+55834288 | MS.gene059061:CDS |
| TATACAGCAATTTCAGCTAA+AGG | 0.395099 | 2.4:+55834091 | MS.gene059061:CDS |
| TGCTGTCATTATTGGATCTC+AGG | 0.395803 | 2.4:+55832211 | MS.gene059061:CDS |
| CTTATATGTACTTTCTCACT+TGG | 0.401622 | 2.4:-55833875 | None:intergenic |
| CCAAGTTCTTGACAAGGTTT+AGG | 0.403560 | 2.4:-55834349 | None:intergenic |
| ATAACATTGAAGGATATAAC+TGG | 0.408428 | 2.4:+55834175 | MS.gene059061:CDS |
| GCATCCACCCTGTTTATTGC+AGG | 0.409422 | 2.4:+55833140 | MS.gene059061:CDS |
| AACCATTCCATTGCCATCAA+TGG | 0.414602 | 2.4:-55832999 | None:intergenic |
| AGATACAAGAGCTTGATAAA+TGG | 0.415928 | 2.4:+55832835 | MS.gene059061:CDS |
| CTCAAGTCATTTGCTGATAA+GGG | 0.419974 | 2.4:+55832101 | MS.gene059061:CDS |
| CCTAAACCTTGTCAAGAACT+TGG | 0.423904 | 2.4:+55834349 | MS.gene059061:CDS |
| TGAATCCTAAATTGGATCCT+AGG | 0.429800 | 2.4:+55831991 | MS.gene059061:CDS |
| TTCCCATTTACTTGAAGAAA+CGG | 0.430980 | 2.4:-55834290 | None:intergenic |
| ATATTGGAATTTGGTGCAGT+TGG | 0.436498 | 2.4:+55832029 | MS.gene059061:CDS |
| TTTGCATCACATAACATTGA+AGG | 0.443614 | 2.4:+55834165 | MS.gene059061:CDS |
| CTACCAGTAAGCCAGTTTCC+TGG | 0.448344 | 2.4:-55832146 | None:intergenic |
| ATAGAGACACTGTGTGGCCT+AGG | 0.453912 | 2.4:-55832008 | None:intergenic |
| GACGCAATTTCTCTCAAAAG+TGG | 0.454842 | 2.4:+55833821 | MS.gene059061:CDS |
| TTGTTTAGGATCCATCTCAT+TGG | 0.466913 | 2.4:+55832758 | MS.gene059061:intron |
| TTATGACCACATCTTCCAAC+TGG | 0.467822 | 2.4:-55832861 | None:intergenic |
| ATGAGGACGACTGTGGTTAA+GGG | 0.472010 | 2.4:-55833047 | None:intergenic |
| GAAGATTGTTATGTTTCCAT+TGG | 0.475742 | 2.4:+55833794 | MS.gene059061:CDS |
| GTGAGAAAGTACATATAAGA+AGG | 0.477334 | 2.4:+55833879 | MS.gene059061:CDS |
| ATGGGAATGTTCAAATGTCT+CGG | 0.480367 | 2.4:+55834306 | MS.gene059061:CDS |
| TCATTTGGTACTGAAATGTC+TGG | 0.487250 | 2.4:+55833935 | MS.gene059061:CDS |
| AAGCTCTTGTATCTTCCGTC+AGG | 0.495493 | 2.4:-55832826 | None:intergenic |
| TAGACAAGGTTATATTTGAA+AGG | 0.499579 | 2.4:-55834261 | None:intergenic |
| AACATCTCCATAAACATTCA+CGG | 0.500990 | 2.4:-55831955 | None:intergenic |
| CAATTTCTCTCAAAAGTGGA+TGG | 0.507018 | 2.4:+55833825 | MS.gene059061:CDS |
| GATGACGAAGAAGAATTTGA+AGG | 0.513232 | 2.4:-55834376 | None:intergenic |
| TGGGAATGTTCAAATGTCTC+GGG | 0.517276 | 2.4:+55834307 | MS.gene059061:CDS |
| ACCAAATGAAATAGCAGAGC+CGG | 0.517644 | 2.4:-55833921 | None:intergenic |
| AATGGAACCATTGATGGCAA+TGG | 0.521099 | 2.4:+55832992 | MS.gene059061:CDS |
| TCTTTCCCTCGGCCATAAGA+AGG | 0.523156 | 2.4:-55832799 | None:intergenic |
| AATGTTATGTGATGCAAAAG+TGG | 0.524613 | 2.4:-55834160 | None:intergenic |
| TCAATAACATTCCAATGAGA+TGG | 0.528619 | 2.4:-55832769 | None:intergenic |
| CCAGAATCCCCTTATACTGC+CGG | 0.534389 | 2.4:+55833289 | MS.gene059061:CDS |
| GCTTTACCTTCTTATGGCCG+AGG | 0.543091 | 2.4:+55832793 | MS.gene059061:CDS |
| ACAATTGCTGGAAGCTTGAG+TGG | 0.543463 | 2.4:+55834208 | MS.gene059061:CDS |
| CTTGATAAATGGTAACCAGT+TGG | 0.546984 | 2.4:+55832846 | MS.gene059061:CDS |
| TGGTAACCAGTTGGAAGATG+TGG | 0.548355 | 2.4:+55832855 | MS.gene059061:CDS |
| CGTCAGGAACATCTTTCCCT+CGG | 0.553651 | 2.4:-55832810 | None:intergenic |
| ACAGGGTGGATGCTATATGC+TGG | 0.557217 | 2.4:-55833130 | None:intergenic |
| AGAAATTGCGTCAAAACCAA+TGG | 0.560982 | 2.4:-55833810 | None:intergenic |
| TTCAGAACAACCAAAGGAAG+AGG | 0.562716 | 2.4:+55834019 | MS.gene059061:CDS |
| TTACTAACCTGGTACTATAC+CGG | 0.564112 | 2.4:-55833308 | None:intergenic |
| ATGGCAATGGAATGGTTTGG+TGG | 0.564149 | 2.4:+55833005 | MS.gene059061:CDS |
| GAATTTGGTGCAGTTGGAGA+TGG | 0.565909 | 2.4:+55832035 | MS.gene059061:CDS |
| TGGCAATGGAATGGTTTGGT+GGG | 0.576997 | 2.4:+55833006 | MS.gene059061:CDS |
| TTGATGGCAATGGAATGGTT+TGG | 0.583352 | 2.4:+55833002 | MS.gene059061:CDS |
| ATGACGAAGAAGAATTTGAA+GGG | 0.583947 | 2.4:-55834375 | None:intergenic |
| TACTATACCGGCAGTATAAG+GGG | 0.586797 | 2.4:-55833296 | None:intergenic |
| TGAGAAAGTACATATAAGAA+GGG | 0.590695 | 2.4:+55833880 | MS.gene059061:CDS |
| AGAAACGGAATTTGTAGACA+AGG | 0.591928 | 2.4:-55834275 | None:intergenic |
| CTTTACCTTCTTATGGCCGA+GGG | 0.592122 | 2.4:+55832794 | MS.gene059061:CDS |
| TGAAAGGCATATGTTTGTGA+AGG | 0.592606 | 2.4:-55834245 | None:intergenic |
| GATATAATTTCAACGAGATG+AGG | 0.595103 | 2.4:-55833064 | None:intergenic |
| GCTCAGCTCTATGTGCCACC+AGG | 0.597340 | 2.4:+55832128 | MS.gene059061:CDS |
| TATACTGCCGGTATAGTACC+AGG | 0.604603 | 2.4:+55833301 | MS.gene059061:CDS |
| TGTTACTACCTCATGAGTCT+CGG | 0.607492 | 2.4:+55834400 | MS.gene059061:CDS |
| AATTTCTCTCAAAAGTGGAT+GGG | 0.608979 | 2.4:+55833826 | MS.gene059061:CDS |
| AACCATTGATGGCAATGGAA+TGG | 0.612706 | 2.4:+55832997 | MS.gene059061:CDS |
| AAAAGTGGATGGGATCAGTA+CGG | 0.626304 | 2.4:+55833836 | MS.gene059061:CDS |
| TTTGGTACTGAAATGTCTGG+TGG | 0.627310 | 2.4:+55833938 | MS.gene059061:CDS |
| GAAAGGCATATGTTTGTGAA+GGG | 0.628625 | 2.4:-55834244 | None:intergenic |
| GGGTTACCAAGTTCTTGACA+AGG | 0.644208 | 2.4:-55834355 | None:intergenic |
| CGAGGGAAAGATGTTCCTGA+CGG | 0.645144 | 2.4:+55832811 | MS.gene059061:CDS |
| ATTGAGTTCAGAACAACCAA+AGG | 0.651524 | 2.4:+55834013 | MS.gene059061:CDS |
| AGAACAACCAAAGGAAGAGG+TGG | 0.657978 | 2.4:+55834022 | MS.gene059061:CDS |
| AAGTCATTTGCTGATAAGGG+TGG | 0.660065 | 2.4:+55832104 | MS.gene059061:CDS |
| CAACGAGATGAGGACGACTG+TGG | 0.660908 | 2.4:-55833054 | None:intergenic |
| TTATTTACCTGCAATAAACA+GGG | 0.669198 | 2.4:-55833147 | None:intergenic |
| TTTACCTGCAATAAACAGGG+TGG | 0.674542 | 2.4:-55833144 | None:intergenic |
| GCAGTATAAGGGGATTCTGG+AGG | 0.680237 | 2.4:-55833286 | None:intergenic |
| TCCAATATAGAGACACTGTG+TGG | 0.732684 | 2.4:-55832014 | None:intergenic |
| CCAGTAAGCCAGTTTCCTGG+TGG | 0.733343 | 2.4:-55832143 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTCAACAAAAATATTATA+AGG | - | chr2.4:55831555-55831574 | None:intergenic | 15.0% |
| !! | ATGATATAATTGAATATACT+CGG | - | chr2.4:55833599-55833618 | None:intergenic | 15.0% |
| !!! | CATTTTTCAAATAATTACTA+GGG | + | chr2.4:55833616-55833635 | MS.gene059061:intron | 15.0% |
| !!! | TCATTTTTCAAATAATTACT+AGG | + | chr2.4:55833615-55833634 | MS.gene059061:intron | 15.0% |
| !!! | TTTTTCATTTAATTTTTACC+AGG | + | chr2.4:55832965-55832984 | MS.gene059061:intron | 15.0% |
| !! | ATCAATATATCAGATCAAAA+TGG | - | chr2.4:55831459-55831478 | None:intergenic | 20.0% |
| !! | ATCTTTGAATGTATTGAAAT+TGG | + | chr2.4:55832322-55832341 | MS.gene059061:intron | 20.0% |
| !! | GCTATATTATTATAGCATAT+CGG | + | chr2.4:55832624-55832643 | MS.gene059061:intron | 20.0% |
| !! | TCATACATAAAATTTGAACA+TGG | - | chr2.4:55831356-55831375 | None:intergenic | 20.0% |
| !! | TCTTTGAATGTATTGAAATT+GGG | + | chr2.4:55832323-55832342 | MS.gene059061:intron | 20.0% |
| !! | TTACCATCTCAAATAATTAT+CGG | - | chr2.4:55833501-55833520 | None:intergenic | 20.0% |
| !! | TTCTTCTTTGATACTTAATT+TGG | + | chr2.4:55833181-55833200 | MS.gene059061:intron | 20.0% |
| !!! | AATTATATCATCTGATTTTG+TGG | + | chr2.4:55833078-55833097 | MS.gene059061:CDS | 20.0% |
| !!! | TGCTTTGTTTTTCATTTTAA+GGG | + | chr2.4:55831258-55831277 | MS.gene059061:intron | 20.0% |
| !!! | TTCTATGTCATTTTAAATCT+GGG | + | chr2.4:55831853-55831872 | MS.gene059061:intron | 20.0% |
| !!! | TTGCTTTGTTTTTCATTTTA+AGG | + | chr2.4:55831257-55831276 | MS.gene059061:intron | 20.0% |
| !!! | TTTCTATGTCATTTTAAATC+TGG | + | chr2.4:55831852-55831871 | MS.gene059061:intron | 20.0% |
| !!! | TTTTTGTGTTTTGTTCATAT+GGG | + | chr2.4:55831330-55831349 | MS.gene059061:intron | 20.0% |
| ! | AATTGTGTATTGTTCCTATT+TGG | + | chr2.4:55832568-55832587 | MS.gene059061:intron | 25.0% |
| ! | AATTTGGCAGACAAAATTAA+GGG | + | chr2.4:55833197-55833216 | MS.gene059061:intron | 25.0% |
| ! | ACTAACAAAATTCTTACTCA+GGG | - | chr2.4:55832356-55832375 | None:intergenic | 25.0% |
| ! | ATAACATTGAAGGATATAAC+TGG | + | chr2.4:55834175-55834194 | MS.gene059061:CDS | 25.0% |
| ! | ATACCGATAATTATTTGAGA+TGG | + | chr2.4:55833495-55833514 | MS.gene059061:intron | 25.0% |
| ! | ATTATTTACCTGCAATAAAC+AGG | - | chr2.4:55833151-55833170 | None:intergenic | 25.0% |
| ! | CTTTAATATGTTTACTAACC+TGG | - | chr2.4:55833322-55833341 | None:intergenic | 25.0% |
| ! | TAATTTGGCAGACAAAATTA+AGG | + | chr2.4:55833196-55833215 | MS.gene059061:intron | 25.0% |
| ! | TAGACAAGGTTATATTTGAA+AGG | - | chr2.4:55834264-55834283 | None:intergenic | 25.0% |
| ! | TTATTTACCTGCAATAAACA+GGG | - | chr2.4:55833150-55833169 | None:intergenic | 25.0% |
| !! | AACATTTTCAACTCAAATAG+TGG | + | chr2.4:55833989-55834008 | MS.gene059061:CDS | 25.0% |
| !! | CCATGAGTAAAAAATCATTT+TGG | - | chr2.4:55832511-55832530 | None:intergenic | 25.0% |
| !! | TAATTTTTACCAGGCAATAA+TGG | + | chr2.4:55832974-55832993 | MS.gene059061:intron | 25.0% |
| !! | TGAGAAAGTACATATAAGAA+GGG | + | chr2.4:55833880-55833899 | MS.gene059061:CDS | 25.0% |
| !!! | ATGTATGAGATTTGTTCTTT+TGG | + | chr2.4:55831368-55831387 | MS.gene059061:intron | 25.0% |
| !!! | CCAAAATGATTTTTTACTCA+TGG | + | chr2.4:55832508-55832527 | MS.gene059061:intron | 25.0% |
| !!! | GTTTTTGTGTTTTGTTCATA+TGG | + | chr2.4:55831329-55831348 | MS.gene059061:intron | 25.0% |
| !!! | GTTTTTTTGTTCCTTTTGTT+TGG | + | chr2.4:55831391-55831410 | MS.gene059061:intron | 25.0% |
| !!! | TCTCTTCAAGTTTTGATTTT+TGG | + | chr2.4:55831281-55831300 | MS.gene059061:intron | 25.0% |
| !!! | TGTATGAGATTTGTTCTTTT+GGG | + | chr2.4:55831369-55831388 | MS.gene059061:intron | 25.0% |
| !!! | TTCAAGTTTTGATTTTTGGT+TGG | + | chr2.4:55831285-55831304 | MS.gene059061:intron | 25.0% |
| AAATGTTAACATGCTCTATC+AGG | - | chr2.4:55833976-55833995 | None:intergenic | 30.0% | |
| AACATCTCCATAAACATTCA+CGG | - | chr2.4:55831958-55831977 | None:intergenic | 30.0% | |
| AATCAAATTTCAGGAGTTAC+TGG | - | chr2.4:55832264-55832283 | None:intergenic | 30.0% | |
| AATGCTTCATAGGTTATGTT+TGG | + | chr2.4:55831828-55831847 | MS.gene059061:intron | 30.0% | |
| AATGTTATGTGATGCAAAAG+TGG | - | chr2.4:55834163-55834182 | None:intergenic | 30.0% | |
| AATTCACTTCAAATTGACAG+AGG | - | chr2.4:55831712-55831731 | None:intergenic | 30.0% | |
| AATTTCTCTCAAAAGTGGAT+GGG | + | chr2.4:55833826-55833845 | MS.gene059061:CDS | 30.0% | |
| AGATACAAGAGCTTGATAAA+TGG | + | chr2.4:55832835-55832854 | MS.gene059061:CDS | 30.0% | |
| AGTGTCTCTATATTGGAATT+TGG | + | chr2.4:55832020-55832039 | MS.gene059061:CDS | 30.0% | |
| ATGACGAAGAAGAATTTGAA+GGG | - | chr2.4:55834378-55834397 | None:intergenic | 30.0% | |
| ATTCCGTTTCTTCAAGTAAA+TGG | + | chr2.4:55834287-55834306 | MS.gene059061:CDS | 30.0% | |
| ATTGAAGCTTTACCTTCTTA+TGG | + | chr2.4:55832787-55832806 | MS.gene059061:CDS | 30.0% | |
| ATTTCAGCTAAAGGTAATTC+TGG | + | chr2.4:55834100-55834119 | MS.gene059061:CDS | 30.0% | |
| CACTAACAAAATTCTTACTC+AGG | - | chr2.4:55832357-55832376 | None:intergenic | 30.0% | |
| CTTAAACTAGTTCCAAATCT+GGG | + | chr2.4:55831228-55831247 | MS.gene059061:intron | 30.0% | |
| CTTATATGTACTTTCTCACT+TGG | - | chr2.4:55833878-55833897 | None:intergenic | 30.0% | |
| GAAGATTGTTATGTTTCCAT+TGG | + | chr2.4:55833794-55833813 | MS.gene059061:CDS | 30.0% | |
| GACGAAACTAATCAAATTTC+AGG | - | chr2.4:55832273-55832292 | None:intergenic | 30.0% | |
| GATAGAAGCAAGAACAAATT+TGG | - | chr2.4:55832906-55832925 | None:intergenic | 30.0% | |
| GATATAATTTCAACGAGATG+AGG | - | chr2.4:55833067-55833086 | None:intergenic | 30.0% | |
| GCAAAAACAATGAAAGAACT+AGG | - | chr2.4:55831621-55831640 | None:intergenic | 30.0% | |
| GTAAGCTATTGACATTTGAA+AGG | - | chr2.4:55833698-55833717 | None:intergenic | 30.0% | |
| TAAACCAATTAATCACCAGA+AGG | - | chr2.4:55831886-55831905 | None:intergenic | 30.0% | |
| TACAAAATGTTGTCAAATGG+CGG | + | chr2.4:55832591-55832610 | MS.gene059061:intron | 30.0% | |
| TATACAGCAATTTCAGCTAA+AGG | + | chr2.4:55834091-55834110 | MS.gene059061:CDS | 30.0% | |
| TCAATAACATTCCAATGAGA+TGG | - | chr2.4:55832772-55832791 | None:intergenic | 30.0% | |
| TGAAATTTCATAAACATCCC+TGG | - | chr2.4:55832445-55832464 | None:intergenic | 30.0% | |
| TGAGATAGAAAATTGCATTC+TGG | - | chr2.4:55832085-55832104 | None:intergenic | 30.0% | |
| TGATTAACAACAATCACCAT+TGG | - | chr2.4:55831427-55831446 | None:intergenic | 30.0% | |
| TGCTTTATCACACATAGAAA+TGG | + | chr2.4:55834060-55834079 | MS.gene059061:CDS | 30.0% | |
| TGGTACAAAATGTTGTCAAA+TGG | + | chr2.4:55832588-55832607 | MS.gene059061:intron | 30.0% | |
| TGTATGTGTTAATGCTTCAT+AGG | + | chr2.4:55831818-55831837 | MS.gene059061:intron | 30.0% | |
| TTCATGTGAAACCAATTTGA+GGG | + | chr2.4:55832715-55832734 | MS.gene059061:intron | 30.0% | |
| TTCCCATTTACTTGAAGAAA+CGG | - | chr2.4:55834293-55834312 | None:intergenic | 30.0% | |
| TTCCGTTTCTTCAAGTAAAT+GGG | + | chr2.4:55834288-55834307 | MS.gene059061:CDS | 30.0% | |
| TTTCATGTGAAACCAATTTG+AGG | + | chr2.4:55832714-55832733 | MS.gene059061:intron | 30.0% | |
| TTTGCATCACATAACATTGA+AGG | + | chr2.4:55834165-55834184 | MS.gene059061:CDS | 30.0% | |
| TTTGGATCAAATTTGTCATC+AGG | - | chr2.4:55834133-55834152 | None:intergenic | 30.0% | |
| ! | AAAATCATTTTGGACCTTGA+AGG | - | chr2.4:55832501-55832520 | None:intergenic | 30.0% |
| ! | ATGTCGTTTGAATCCTAAAT+TGG | + | chr2.4:55831983-55832002 | MS.gene059061:CDS | 30.0% |
| ! | CTGAGTAAGAATTTTGTTAG+TGG | + | chr2.4:55832355-55832374 | MS.gene059061:intron | 30.0% |
| ! | GACAACATTTTGTACCAAAT+AGG | - | chr2.4:55832585-55832604 | None:intergenic | 30.0% |
| ! | GTGAGAAAGTACATATAAGA+AGG | + | chr2.4:55833879-55833898 | MS.gene059061:CDS | 30.0% |
| ! | GTTTAAGGTGAAAACTCAAA+AGG | - | chr2.4:55831215-55831234 | None:intergenic | 30.0% |
| ! | TCTTGCTTCTATCAAGTTTT+TGG | + | chr2.4:55832913-55832932 | MS.gene059061:intron | 30.0% |
| AAAGGTTGTCTATGAAGTAC+TGG | - | chr2.4:55833680-55833699 | None:intergenic | 35.0% | |
| AACCAATTTGAGGGTAATTG+AGG | + | chr2.4:55832724-55832743 | MS.gene059061:intron | 35.0% | |
| AAGCAATATAGTCCCAGATT+TGG | - | chr2.4:55831243-55831262 | None:intergenic | 35.0% | |
| ACGAGGATCAAGCTTATTAA+GGG | + | chr2.4:55832410-55832429 | MS.gene059061:intron | 35.0% | |
| AGAAACGGAATTTGTAGACA+AGG | - | chr2.4:55834278-55834297 | None:intergenic | 35.0% | |
| AGAAATTGCGTCAAAACCAA+TGG | - | chr2.4:55833813-55833832 | None:intergenic | 35.0% | |
| ATGGGAATGTTCAAATGTCT+CGG | + | chr2.4:55834306-55834325 | MS.gene059061:CDS | 35.0% | |
| ATTGAGTTCAGAACAACCAA+AGG | + | chr2.4:55834013-55834032 | MS.gene059061:CDS | 35.0% | |
| CAATTTCTCTCAAAAGTGGA+TGG | + | chr2.4:55833825-55833844 | MS.gene059061:CDS | 35.0% | |
| CCTTAAACTAGTTCCAAATC+TGG | + | chr2.4:55831227-55831246 | MS.gene059061:intron | 35.0% | |
| CTGGTAAAAAATGAAGCAAG+AGG | - | chr2.4:55832245-55832264 | None:intergenic | 35.0% | |
| CTGTTATCCTCATTGTGAAA+TGG | + | chr2.4:55833350-55833369 | MS.gene059061:intron | 35.0% | |
| CTTCAGATTGAATGAGTGTT+CGG | + | chr2.4:55833397-55833416 | MS.gene059061:intron | 35.0% | |
| CTTGATAAATGGTAACCAGT+TGG | + | chr2.4:55832846-55832865 | MS.gene059061:CDS | 35.0% | |
| CTTTCCTTCTGGTGATTAAT+TGG | + | chr2.4:55831879-55831898 | MS.gene059061:intron | 35.0% | |
| GAAGTGATTCTCTCATTGAT+TGG | + | chr2.4:55831570-55831589 | MS.gene059061:intron | 35.0% | |
| GATCAGTACGGCATTAAATA+TGG | + | chr2.4:55833848-55833867 | MS.gene059061:CDS | 35.0% | |
| GATGACGAAGAAGAATTTGA+AGG | - | chr2.4:55834379-55834398 | None:intergenic | 35.0% | |
| GCATATACAAGCCAAACAAA+AGG | - | chr2.4:55831405-55831424 | None:intergenic | 35.0% | |
| GGAAAGAATATCACAATTGC+TGG | + | chr2.4:55834196-55834215 | MS.gene059061:CDS | 35.0% | |
| TGAATCCTAAATTGGATCCT+AGG | + | chr2.4:55831991-55832010 | MS.gene059061:CDS | 35.0% | |
| TTACTAACCTGGTACTATAC+CGG | - | chr2.4:55833311-55833330 | None:intergenic | 35.0% | |
| TTGAATGTAAGCACACATGT+TGG | + | chr2.4:55833526-55833545 | MS.gene059061:intron | 35.0% | |
| ! | AGCACCTTTTTCCAAAAAGA+GGG | - | chr2.4:55832195-55832214 | None:intergenic | 35.0% |
| ! | CCAGATTTGGAACTAGTTTA+AGG | - | chr2.4:55831230-55831249 | None:intergenic | 35.0% |
| ! | CTCAAGTCATTTGCTGATAA+GGG | + | chr2.4:55832101-55832120 | MS.gene059061:CDS | 35.0% |
| ! | GAAAGGCATATGTTTGTGAA+GGG | - | chr2.4:55834247-55834266 | None:intergenic | 35.0% |
| ! | GAATTTTGTTAGTGGTTTCG+TGG | + | chr2.4:55832363-55832382 | MS.gene059061:intron | 35.0% |
| ! | TCATTTGGTACTGAAATGTC+TGG | + | chr2.4:55833935-55833954 | MS.gene059061:CDS | 35.0% |
| ! | TCTCAAGTCATTTGCTGATA+AGG | + | chr2.4:55832100-55832119 | MS.gene059061:CDS | 35.0% |
| ! | TGAAAGGCATATGTTTGTGA+AGG | - | chr2.4:55834248-55834267 | None:intergenic | 35.0% |
| ! | TGGTTTATGTGACCTTTTTC+AGG | + | chr2.4:55831899-55831918 | MS.gene059061:intron | 35.0% |
| ! | TTGTTTAGGATCCATCTCAT+TGG | + | chr2.4:55832758-55832777 | MS.gene059061:intron | 35.0% |
| !! | AGGAGTGGTTTTTCTTGTTT+AGG | + | chr2.4:55832744-55832763 | MS.gene059061:intron | 35.0% |
| !! | ATATTGGAATTTGGTGCAGT+TGG | + | chr2.4:55832029-55832048 | MS.gene059061:CDS | 35.0% |
| !! | GAAAAAGGTGCTGTCATTAT+TGG | + | chr2.4:55832203-55832222 | MS.gene059061:CDS | 35.0% |
| !!! | TTTATGTGACCTTTTTCAGG+TGG | + | chr2.4:55831902-55831921 | MS.gene059061:intron | 35.0% |
| !!! | TTTCGTCTTTTTTATGTGCG+AGG | + | chr2.4:55832286-55832305 | MS.gene059061:intron | 35.0% |
| AAAAGTGGATGGGATCAGTA+CGG | + | chr2.4:55833836-55833855 | MS.gene059061:CDS | 40.0% | |
| AACCATTCCATTGCCATCAA+TGG | - | chr2.4:55833002-55833021 | None:intergenic | 40.0% | |
| ACCAAATGAAATAGCAGAGC+CGG | - | chr2.4:55833924-55833943 | None:intergenic | 40.0% | |
| AGCAATGCCGTGAATGTTTA+TGG | + | chr2.4:55831948-55831967 | MS.gene059061:CDS | 40.0% | |
| AGTTGGACACAAGCATGTAT+TGG | - | chr2.4:55833426-55833445 | None:intergenic | 40.0% | |
| ATTTGAGGGTAATTGAGGAG+TGG | + | chr2.4:55832729-55832748 | MS.gene059061:intron | 40.0% | |
| CACGAGGATCAAGCTTATTA+AGG | + | chr2.4:55832409-55832428 | MS.gene059061:intron | 40.0% | |
| CCAACTATGAGGCAAAAACA+CGG | + | chr2.4:55833440-55833459 | MS.gene059061:intron | 40.0% | |
| CCAAGTTCTTGACAAGGTTT+AGG | - | chr2.4:55834352-55834371 | None:intergenic | 40.0% | |
| CCTAAACCTTGTCAAGAACT+TGG | + | chr2.4:55834349-55834368 | MS.gene059061:CDS | 40.0% | |
| CTCCTCAATTACCCTCAAAT+TGG | - | chr2.4:55832729-55832748 | None:intergenic | 40.0% | |
| CTTGTAAGTACGTTTCACTC+GGG | + | chr2.4:55831154-55831173 | MS.gene059061:intron | 40.0% | |
| GACGCAATTTCTCTCAAAAG+TGG | + | chr2.4:55833821-55833840 | MS.gene059061:CDS | 40.0% | |
| GCTTGTAAGTACGTTTCACT+CGG | + | chr2.4:55831153-55831172 | MS.gene059061:intron | 40.0% | |
| GTACTATACCGGCAGTATAA+GGG | - | chr2.4:55833300-55833319 | None:intergenic | 40.0% | |
| GTCAATAGCTTACCAAACCT+TGG | + | chr2.4:55833705-55833724 | MS.gene059061:intron | 40.0% | |
| GTTCATCTTCGTGCATTTAC+CGG | + | chr2.4:55833902-55833921 | MS.gene059061:CDS | 40.0% | |
| TACTATACCGGCAGTATAAG+GGG | - | chr2.4:55833299-55833318 | None:intergenic | 40.0% | |
| TATGTAACCACCTCTTCCTT+TGG | - | chr2.4:55834032-55834051 | None:intergenic | 40.0% | |
| TCAATGGTTCCATTATTGCC+TGG | - | chr2.4:55832986-55833005 | None:intergenic | 40.0% | |
| TCCAATATAGAGACACTGTG+TGG | - | chr2.4:55832017-55832036 | None:intergenic | 40.0% | |
| TGACTAACAAAAGAGACACG+AGG | + | chr2.4:55832393-55832412 | MS.gene059061:intron | 40.0% | |
| TGCTGTCATTATTGGATCTC+AGG | + | chr2.4:55832211-55832230 | MS.gene059061:CDS | 40.0% | |
| TGGGAATGTTCAAATGTCTC+GGG | + | chr2.4:55834307-55834326 | MS.gene059061:CDS | 40.0% | |
| TGTTACTACCTCATGAGTCT+CGG | + | chr2.4:55834400-55834419 | MS.gene059061:CDS | 40.0% | |
| TTATGACCACATCTTCCAAC+TGG | - | chr2.4:55832864-55832883 | None:intergenic | 40.0% | |
| TTCAGAACAACCAAAGGAAG+AGG | + | chr2.4:55834019-55834038 | MS.gene059061:CDS | 40.0% | |
| TTGGAAGATGTGGTCATAAC+AGG | + | chr2.4:55832865-55832884 | MS.gene059061:CDS | 40.0% | |
| TTTACCTGCAATAAACAGGG+TGG | - | chr2.4:55833147-55833166 | None:intergenic | 40.0% | |
| TTTCCAAAAAGAGGGTGAGA+TGG | - | chr2.4:55832187-55832206 | None:intergenic | 40.0% | |
| ! | AACCATTGATGGCAATGGAA+TGG | + | chr2.4:55832997-55833016 | MS.gene059061:CDS | 40.0% |
| ! | AAGTCATTTGCTGATAAGGG+TGG | + | chr2.4:55832104-55832123 | MS.gene059061:CDS | 40.0% |
| ! | AATCTGGGATACTTTCCTTC+TGG | + | chr2.4:55831868-55831887 | MS.gene059061:intron | 40.0% |
| ! | AATGGAACCATTGATGGCAA+TGG | + | chr2.4:55832992-55833011 | MS.gene059061:CDS | 40.0% |
| ! | CAGCACCTTTTTCCAAAAAG+AGG | - | chr2.4:55832196-55832215 | None:intergenic | 40.0% |
| ! | GAAGTGTCAATGCTACATAG+AGG | - | chr2.4:55833381-55833400 | None:intergenic | 40.0% |
| ! | GGCAATAATGGAACCATTGA+TGG | + | chr2.4:55832986-55833005 | MS.gene059061:intron | 40.0% |
| ! | GTGTCGATGTTAGTCACTTA+TGG | - | chr2.4:55833572-55833591 | None:intergenic | 40.0% |
| ! | TTGATGGCAATGGAATGGTT+TGG | + | chr2.4:55833002-55833021 | MS.gene059061:CDS | 40.0% |
| ! | TTTGGTACTGAAATGTCTGG+TGG | + | chr2.4:55833938-55833957 | MS.gene059061:CDS | 40.0% |
| !! | CTCACCCTCTTTTTGGAAAA+AGG | + | chr2.4:55832188-55832207 | MS.gene059061:CDS | 40.0% |
| !! | GTTTGGCTTGTATATGCCAA+TGG | + | chr2.4:55831408-55831427 | MS.gene059061:intron | 40.0% |
| !!! | TATTTTGACCGAGACTCATG+AGG | - | chr2.4:55834411-55834430 | None:intergenic | 40.0% |
| !!! | TGCAAAAGTGGAAGTGCTTT+TGG | - | chr2.4:55834151-55834170 | None:intergenic | 40.0% |
| AAGCTCTTGTATCTTCCGTC+AGG | - | chr2.4:55832829-55832848 | None:intergenic | 45.0% | |
| ACAATTGCTGGAAGCTTGAG+TGG | + | chr2.4:55834208-55834227 | MS.gene059061:CDS | 45.0% | |
| AGAACAACCAAAGGAAGAGG+TGG | + | chr2.4:55834022-55834041 | MS.gene059061:CDS | 45.0% | |
| AGAGCAATGCCACCTGAAAA+AGG | - | chr2.4:55831914-55831933 | None:intergenic | 45.0% | |
| AGCTTACCAAACCTTGGTGA+GGG | + | chr2.4:55833711-55833730 | MS.gene059061:intron | 45.0% | |
| ATGAGGACGACTGTGGTTAA+GGG | - | chr2.4:55833050-55833069 | None:intergenic | 45.0% | |
| CATGCTTGTGTCCAACTATG+AGG | + | chr2.4:55833429-55833448 | MS.gene059061:intron | 45.0% | |
| CTTTACCTTCTTATGGCCGA+GGG | + | chr2.4:55832794-55832813 | MS.gene059061:CDS | 45.0% | |
| GCCACACAGTGTCTCTATAT+TGG | + | chr2.4:55832013-55832032 | MS.gene059061:CDS | 45.0% | |
| GGGTTACCAAGTTCTTGACA+AGG | - | chr2.4:55834358-55834377 | None:intergenic | 45.0% | |
| GGTACTATACCGGCAGTATA+AGG | - | chr2.4:55833301-55833320 | None:intergenic | 45.0% | |
| TAGCTTACCAAACCTTGGTG+AGG | + | chr2.4:55833710-55833729 | MS.gene059061:intron | 45.0% | |
| TATACTGCCGGTATAGTACC+AGG | + | chr2.4:55833301-55833320 | MS.gene059061:CDS | 45.0% | |
| TGGTAACCAGTTGGAAGATG+TGG | + | chr2.4:55832855-55832874 | MS.gene059061:CDS | 45.0% | |
| TGTGGCCTAGGATCCAATTT+AGG | - | chr2.4:55831999-55832018 | None:intergenic | 45.0% | |
| ! | ATGGCAATGGAATGGTTTGG+TGG | + | chr2.4:55833005-55833024 | MS.gene059061:CDS | 45.0% |
| ! | ATTAAGGGCACACGTATCCA+GGG | + | chr2.4:55832425-55832444 | MS.gene059061:intron | 45.0% |
| ! | GGCATTGCCATTTCACAATG+AGG | - | chr2.4:55833360-55833379 | None:intergenic | 45.0% |
| ! | TAGCCATCTCACCCTCTTTT+TGG | + | chr2.4:55832181-55832200 | MS.gene059061:CDS | 45.0% |
| ! | TATTAAGGGCACACGTATCC+AGG | + | chr2.4:55832424-55832443 | MS.gene059061:intron | 45.0% |
| ! | TGTCTCGGGATTTTCAGACT+CGG | + | chr2.4:55834321-55834340 | MS.gene059061:CDS | 45.0% |
| !! | ACCGGCTCTGCTATTTCATT+TGG | + | chr2.4:55833920-55833939 | MS.gene059061:CDS | 45.0% |
| !! | CCGTGTTTTTGCCTCATAGT+TGG | - | chr2.4:55833443-55833462 | None:intergenic | 45.0% |
| !! | GAATTTGGTGCAGTTGGAGA+TGG | + | chr2.4:55832035-55832054 | MS.gene059061:CDS | 45.0% |
| !! | TGGCAATGGAATGGTTTGGT+GGG | + | chr2.4:55833006-55833025 | MS.gene059061:CDS | 45.0% |
| AAGTGACCCTCACCAAGGTT+TGG | - | chr2.4:55833720-55833739 | None:intergenic | 50.0% | |
| ACACATACACGTGATCAGCG+CGG | - | chr2.4:55831807-55831826 | None:intergenic | 50.0% | |
| ACAGGGTGGATGCTATATGC+TGG | - | chr2.4:55833133-55833152 | None:intergenic | 50.0% | |
| ATAGAGACACTGTGTGGCCT+AGG | - | chr2.4:55832011-55832030 | None:intergenic | 50.0% | |
| CCAGAATCCCCTTATACTGC+CGG | + | chr2.4:55833289-55833308 | MS.gene059061:CDS | 50.0% | |
| CGAGGGAAAGATGTTCCTGA+CGG | + | chr2.4:55832811-55832830 | MS.gene059061:CDS | 50.0% | |
| CGTCAGGAACATCTTTCCCT+CGG | - | chr2.4:55832813-55832832 | None:intergenic | 50.0% | |
| CTACCAGTAAGCCAGTTTCC+TGG | - | chr2.4:55832149-55832168 | None:intergenic | 50.0% | |
| GATGAGGACGACTGTGGTTA+AGG | - | chr2.4:55833051-55833070 | None:intergenic | 50.0% | |
| GCAGTATAAGGGGATTCTGG+AGG | - | chr2.4:55833289-55833308 | None:intergenic | 50.0% | |
| GCATCCACCCTGTTTATTGC+AGG | + | chr2.4:55833140-55833159 | MS.gene059061:CDS | 50.0% | |
| GCTTTACCTTCTTATGGCCG+AGG | + | chr2.4:55832793-55832812 | MS.gene059061:CDS | 50.0% | |
| TAGCTAAGTGACCCTCACCA+AGG | - | chr2.4:55833725-55833744 | None:intergenic | 50.0% | |
| TCTATGTGCCACCAGGAAAC+TGG | + | chr2.4:55832135-55832154 | MS.gene059061:CDS | 50.0% | |
| TCTTTCCCTCGGCCATAAGA+AGG | - | chr2.4:55832802-55832821 | None:intergenic | 50.0% | |
| TGAGACGCTTGTCACCTTCA+AGG | + | chr2.4:55832484-55832503 | MS.gene059061:intron | 50.0% | |
| !! | ACGATACTGACTCTGACTCG+TGG | + | chr2.4:55833472-55833491 | MS.gene059061:intron | 50.0% |
| !! | ATGGAATGGTTTGGTGGGAC+TGG | + | chr2.4:55833011-55833030 | MS.gene059061:CDS | 50.0% |
| CAACGAGATGAGGACGACTG+TGG | - | chr2.4:55833057-55833076 | None:intergenic | 55.0% | |
| CCAGTAAGCCAGTTTCCTGG+TGG | - | chr2.4:55832146-55832165 | None:intergenic | 55.0% | |
| CCGGCAGTATAAGGGGATTC+TGG | - | chr2.4:55833292-55833311 | None:intergenic | 55.0% | |
| ! | CCACCAGGAAACTGGCTTAC+TGG | + | chr2.4:55832143-55832162 | MS.gene059061:CDS | 55.0% |
| GCTCAGCTCTATGTGCCACC+AGG | + | chr2.4:55832128-55832147 | MS.gene059061:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 55831151 | 55834444 | 55831151 | ID=MS.gene059061 |
| chr2.4 | mRNA | 55831151 | 55834444 | 55831151 | ID=MS.gene059061.t1;Parent=MS.gene059061 |
| chr2.4 | exon | 55831151 | 55831156 | 55831151 | ID=MS.gene059061.t1.exon1;Parent=MS.gene059061.t1 |
| chr2.4 | CDS | 55831151 | 55831156 | 55831151 | ID=cds.MS.gene059061.t1;Parent=MS.gene059061.t1 |
| chr2.4 | exon | 55831921 | 55832232 | 55831921 | ID=MS.gene059061.t1.exon2;Parent=MS.gene059061.t1 |
| chr2.4 | CDS | 55831921 | 55832232 | 55831921 | ID=cds.MS.gene059061.t1;Parent=MS.gene059061.t1 |
| chr2.4 | exon | 55832766 | 55832886 | 55832766 | ID=MS.gene059061.t1.exon3;Parent=MS.gene059061.t1 |
| chr2.4 | CDS | 55832766 | 55832886 | 55832766 | ID=cds.MS.gene059061.t1;Parent=MS.gene059061.t1 |
| chr2.4 | exon | 55832987 | 55833161 | 55832987 | ID=MS.gene059061.t1.exon4;Parent=MS.gene059061.t1 |
| chr2.4 | CDS | 55832987 | 55833161 | 55832987 | ID=cds.MS.gene059061.t1;Parent=MS.gene059061.t1 |
| chr2.4 | exon | 55833252 | 55833322 | 55833252 | ID=MS.gene059061.t1.exon5;Parent=MS.gene059061.t1 |
| chr2.4 | CDS | 55833252 | 55833322 | 55833252 | ID=cds.MS.gene059061.t1;Parent=MS.gene059061.t1 |
| chr2.4 | exon | 55833771 | 55834444 | 55833771 | ID=MS.gene059061.t1.exon6;Parent=MS.gene059061.t1 |
| chr2.4 | CDS | 55833771 | 55834444 | 55833771 | ID=cds.MS.gene059061.t1;Parent=MS.gene059061.t1 |
| Gene Sequence |
| Protein sequence |
