Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073289.t1 | XP_003610089.2 | 93.3 | 788 | 17 | 1 | 1 | 752 | 1 | 788 | 0.00E+00 | 1446.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073289.t1 | Q7ZVR1 | 25.2 | 812 | 482 | 25 | 3 | 752 | 13 | 761 | 6.1e-47 | 190.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073289.t1 | G7JUE1 | 93.3 | 788 | 17 | 1 | 1 | 752 | 1 | 788 | 0.0e+00 | 1446.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053895 | MS.gene073289 | -0.802827 | 4.66E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073289.t1 | MTR_4g127820 | 93.274 | 788 | 17 | 1 | 1 | 752 | 1 | 788 | 0.0 | 1501 |
| MS.gene073289.t1 | MTR_4g127820 | 92.492 | 666 | 14 | 1 | 1 | 630 | 1 | 666 | 0.0 | 1253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073289.t1 | AT2G18900 | 53.474 | 806 | 316 | 7 | 2 | 752 | 3 | 804 | 0.0 | 861 |
| MS.gene073289.t1 | AT3G26480 | 40.852 | 798 | 372 | 15 | 1 | 747 | 2 | 750 | 0.0 | 575 |
| MS.gene073289.t1 | AT3G26480 | 41.471 | 680 | 317 | 12 | 1 | 630 | 2 | 650 | 9.50e-173 | 511 |
Find 191 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGTGTTCTGAATTTA+TGG | 0.051705 | 8.1:-4964847 | MS.gene073289:CDS |
| GTCTTATTTGTTTGAAATTC+TGG | 0.092005 | 8.1:-4968308 | MS.gene073289:CDS |
| TAGTCCCTGTGGGAAATTTC+TGG | 0.137918 | 8.1:-4970924 | MS.gene073289:CDS |
| TACCTCTTTCAATGTAATTA+TGG | 0.186644 | 8.1:+4971571 | None:intergenic |
| TCCACAATTTCAGGACAATT+TGG | 0.205354 | 8.1:-4965005 | MS.gene073289:intron |
| ATTTGGTGCTAAGAACTTTC+AGG | 0.214057 | 8.1:-4970723 | MS.gene073289:CDS |
| GATGGAGTCTATTTGTATTC+AGG | 0.226447 | 8.1:-4970563 | MS.gene073289:intron |
| CATAAATTCAGAACACAATT+TGG | 0.241410 | 8.1:+4964848 | None:intergenic |
| AAACAGACGTTCCTTTGATT+TGG | 0.242307 | 8.1:+4966490 | None:intergenic |
| ACACTGCTTACATATTTAAA+TGG | 0.253048 | 8.1:-4965275 | MS.gene073289:CDS |
| TATATTAAAGATCTCTTCTA+TGG | 0.256739 | 8.1:-4969858 | MS.gene073289:CDS |
| AGATCTTTAATATATGAATT+TGG | 0.260390 | 8.1:+4969867 | None:intergenic |
| TGCCCGCGTTTGAATTAAAA+AGG | 0.263248 | 8.1:-4964959 | MS.gene073289:CDS |
| TTGTTTGAAATTCTGGGATT+TGG | 0.264801 | 8.1:-4968301 | MS.gene073289:CDS |
| GCAGCCTTTGACCGCTCTTC+TGG | 0.272718 | 8.1:-4969133 | MS.gene073289:CDS |
| TCAAAGGAACGTCTGTTTAA+AGG | 0.285658 | 8.1:-4966485 | MS.gene073289:CDS |
| ATCCTATTCCAGTGGCTTCC+TGG | 0.299526 | 8.1:-4966430 | MS.gene073289:CDS |
| GGTGGACATTGAAAATCTTT+TGG | 0.303410 | 8.1:+4968269 | None:intergenic |
| TCTTTCAGATATGGGTTTGC+AGG | 0.310406 | 8.1:-4967916 | MS.gene073289:intron |
| TATCTTCTTTCCGTATCTTA+TGG | 0.315540 | 8.1:-4966857 | MS.gene073289:CDS |
| ATGTGATGACCCACTAAATA+TGG | 0.321210 | 8.1:+4964887 | None:intergenic |
| AACAGACGTTCCTTTGATTT+GGG | 0.332736 | 8.1:+4966491 | None:intergenic |
| AGACCTCCTATTCCTTCTTC+AGG | 0.339151 | 8.1:+4968327 | None:intergenic |
| GAGATAATGAGGTCTATATC+AGG | 0.346516 | 8.1:-4969836 | MS.gene073289:CDS |
| GCAGAATTAGAGTCCACTTT+AGG | 0.348714 | 8.1:+4970863 | None:intergenic |
| AATCTGTGCAGAACAAAGTT+TGG | 0.352179 | 8.1:+4971628 | None:intergenic |
| CTGCACCACAGCTGTCTGTT+TGG | 0.361408 | 8.1:-4966832 | MS.gene073289:CDS |
| AATGAGCTCATTGCTGTTGT+AGG | 0.369186 | 8.1:-4967355 | MS.gene073289:CDS |
| TCTTATTTGTTTGAAATTCT+GGG | 0.369586 | 8.1:-4968307 | MS.gene073289:CDS |
| TAGCAAACAAGCTGTAGAAT+TGG | 0.385555 | 8.1:+4969077 | None:intergenic |
| TGCTAATCGTGGACTTTATG+AGG | 0.385797 | 8.1:-4969059 | MS.gene073289:intron |
| TGACCGCTCTTCTGGTTTAG+TGG | 0.389101 | 8.1:-4969125 | MS.gene073289:CDS |
| AACTAAAATTCCGACGCGTC+TGG | 0.391270 | 8.1:+4967873 | None:intergenic |
| ATGGCTGTCAGCGCATCTTA+TGG | 0.392854 | 8.1:-4968031 | MS.gene073289:CDS |
| TAGCTGCATCTTGGTCATAT+AGG | 0.395220 | 8.1:-4966796 | MS.gene073289:CDS |
| AGGAAGGAGTTCTCGTGCTT+TGG | 0.397994 | 8.1:-4970103 | MS.gene073289:CDS |
| CGAAGCGGAGATCCAATTCT+TGG | 0.399101 | 8.1:+4970050 | None:intergenic |
| CTGGTGTATCAAATAGGCCT+TGG | 0.406292 | 8.1:-4964914 | MS.gene073289:CDS |
| ATTGGGAGGCTCATCTTTGT+TGG | 0.406726 | 8.1:-4966890 | MS.gene073289:CDS |
| CTTGTTGGGCTTGAAGAAAA+TGG | 0.408572 | 8.1:-4965179 | MS.gene073289:intron |
| GACCAGGAAGCCACTGGAAT+AGG | 0.410097 | 8.1:+4966428 | None:intergenic |
| TGGGAAATTTCTGGGCATAA+AGG | 0.423011 | 8.1:-4970915 | MS.gene073289:CDS |
| AGTCCCTGTGGGAAATTTCT+GGG | 0.428071 | 8.1:-4970923 | MS.gene073289:CDS |
| GCAATGAGCTCATTCTTGTC+AGG | 0.429752 | 8.1:+4967364 | None:intergenic |
| TTACAAGTTTCCTCCCTTGA+CGG | 0.430747 | 8.1:-4971993 | MS.gene073289:CDS |
| TCATATAGGATTCAAATAGA+AGG | 0.434901 | 8.1:-4966782 | MS.gene073289:intron |
| AATTCAAACGCGGGCAACTC+TGG | 0.434969 | 8.1:+4964966 | None:intergenic |
| TTCCATAATTACATTGAAAG+AGG | 0.437023 | 8.1:-4971573 | MS.gene073289:intron |
| GTTTCATCCGACCCGTCATA+TGG | 0.439794 | 8.1:-4968050 | MS.gene073289:CDS |
| ATCTGTGCAGAACAAAGTTT+GGG | 0.441289 | 8.1:+4971629 | None:intergenic |
| AACTTGTAAGGCGGTGGTGG+TGG | 0.441877 | 8.1:+4972007 | None:intergenic |
| ATGCCATGTGGAACATGATT+CGG | 0.443721 | 8.1:+4970625 | None:intergenic |
| GTAGGTAACAATGTTTGAAC+CGG | 0.444501 | 8.1:+4971935 | None:intergenic |
| GTGGCTGCAGGCGATGTAAC+CGG | 0.453400 | 8.1:-4970767 | MS.gene073289:CDS |
| AACTTTGTTCTGCACAGATT+AGG | 0.455949 | 8.1:-4971625 | MS.gene073289:CDS |
| ATCTTATGGTGGAGATTTCA+AGG | 0.457592 | 8.1:-4968017 | MS.gene073289:intron |
| GTTGGATGTGCCATGCTGTT+GGG | 0.457899 | 8.1:-4967853 | MS.gene073289:CDS |
| GTCTACTGACGGCTCTATGA+TGG | 0.459696 | 8.1:-4968370 | MS.gene073289:CDS |
| ACCGAGGCAAATGAAGGATC+TGG | 0.461506 | 8.1:+4970011 | None:intergenic |
| TTCAGGTAGCTTGACTTCTA+CGG | 0.462358 | 8.1:+4968344 | None:intergenic |
| AGTTGGATGTGCCATGCTGT+TGG | 0.463893 | 8.1:-4967854 | MS.gene073289:CDS |
| TCACGTGCTTCCTTGTCATA+TGG | 0.467300 | 8.1:+4965227 | None:intergenic |
| ATGGAATGCAAGAACGGAAA+AGG | 0.471744 | 8.1:+4970805 | None:intergenic |
| AAGCTACCTGAAGAAGGAAT+AGG | 0.474205 | 8.1:-4968333 | MS.gene073289:CDS |
| ACTGATGAGGAATGTAAGCC+TGG | 0.474768 | 8.1:-4970668 | MS.gene073289:CDS |
| TCCAGATCCTTCATTTGCCT+CGG | 0.479151 | 8.1:-4970012 | MS.gene073289:intron |
| TGAATTTATGGAGTCTCTGA+TGG | 0.479950 | 8.1:-4964835 | MS.gene073289:CDS |
| GAAGATAGCGACGGAGGTGC+CGG | 0.479976 | 8.1:+4972031 | None:intergenic |
| CATACCGTGACCTCGTCAAC+TGG | 0.480508 | 8.1:+4968546 | None:intergenic |
| CCTTGGGAAACCATATTTAG+TGG | 0.481012 | 8.1:-4964897 | MS.gene073289:CDS |
| CTATGCAGGATGATCTTGTT+GGG | 0.481211 | 8.1:-4965193 | MS.gene073289:CDS |
| AAAAGCAATGCTCCCTCCCT+TGG | 0.482991 | 8.1:+4965319 | None:intergenic |
| CAAGAATTGGATCTCCGCTT+CGG | 0.485117 | 8.1:-4970049 | MS.gene073289:CDS |
| TGGAGTCTCTGATGGAGAAA+AGG | 0.488044 | 8.1:-4964827 | MS.gene073289:CDS |
| CGACACTGTTATTACATTGT+GGG | 0.490216 | 8.1:-4967389 | MS.gene073289:CDS |
| GCTGTACAAACAGATAATTA+TGG | 0.491659 | 8.1:-4969103 | MS.gene073289:CDS |
| TGGTGTATCAAATAGGCCTT+GGG | 0.492735 | 8.1:-4964913 | MS.gene073289:CDS |
| ACAAAGATGAGCCTCCCAAT+TGG | 0.495393 | 8.1:+4966893 | None:intergenic |
| TAGAAGACGGTCGCCGGAGT+TGG | 0.495515 | 8.1:+4972061 | None:intergenic |
| CCTCCATCTTTCTCCAACTC+CGG | 0.496290 | 8.1:-4972074 | MS.gene073289:CDS |
| TACAGCTTGTTTGCTAATCG+TGG | 0.498916 | 8.1:-4969070 | MS.gene073289:CDS |
| ACCTCCGTCATCGTCGTCCC+CGG | 0.504848 | 8.1:-4971954 | MS.gene073289:CDS |
| TTCAGAACACAATTTGGTGA+GGG | 0.506646 | 8.1:+4964854 | None:intergenic |
| AATCATGTTCCACATGGCAT+TGG | 0.506867 | 8.1:-4970622 | MS.gene073289:CDS |
| ACTATGCAGGATGATCTTGT+TGG | 0.508221 | 8.1:-4965194 | MS.gene073289:CDS |
| GGAAACTTGTAAGGCGGTGG+TGG | 0.510621 | 8.1:+4972004 | None:intergenic |
| TGTCAAAGTTAGCTGCATCT+TGG | 0.514959 | 8.1:-4966805 | MS.gene073289:CDS |
| AGCTGATGGTTCTGTGCTTG+CGG | 0.519424 | 8.1:-4967419 | MS.gene073289:CDS |
| GAGGTCTATATCAGGGATCA+AGG | 0.523694 | 8.1:-4969828 | MS.gene073289:intron |
| AAGAGCGGTCAAAGGCTGCT+TGG | 0.523886 | 8.1:+4969137 | None:intergenic |
| TATATGGAAAGTTCCTAAAG+TGG | 0.526039 | 8.1:-4970876 | MS.gene073289:CDS |
| TTTATAATAGGTGGGAAGGA+AGG | 0.526948 | 8.1:-4970119 | MS.gene073289:intron |
| GTCAAGGGAGGAAACTTGTA+AGG | 0.528574 | 8.1:+4971995 | None:intergenic |
| CACAGGGACTAACGATCAAA+GGG | 0.532091 | 8.1:+4970936 | None:intergenic |
| GAACGTCTGTTTAAAGGTGA+TGG | 0.533073 | 8.1:-4966479 | MS.gene073289:CDS |
| ACCTGTGAGGTTCATAAACA+AGG | 0.536448 | 8.1:+4968247 | None:intergenic |
| TCGCCGGAGTTGGAGAAAGA+TGG | 0.538335 | 8.1:+4972071 | None:intergenic |
| GCAGCCACAATCCTCTCAGT+TGG | 0.539224 | 8.1:+4970782 | None:intergenic |
| GTTACAGACCAGGAAGCCAC+TGG | 0.539338 | 8.1:+4966422 | None:intergenic |
| TGCTCTCATTCCCAAATCAA+AGG | 0.540226 | 8.1:-4966501 | MS.gene073289:CDS |
| CCACAATCCTCTCAGTTGGA+TGG | 0.541489 | 8.1:+4970786 | None:intergenic |
| ACTCTCACCGAGGCAAATGA+AGG | 0.542459 | 8.1:+4970005 | None:intergenic |
| CCCTTGTTTATGAACCTCAC+AGG | 0.543669 | 8.1:-4968248 | MS.gene073289:intron |
| GGCTTCCTGGTCTGTAACGA+AGG | 0.545184 | 8.1:-4966417 | MS.gene073289:intron |
| GAAGTCAAGCTACCTGAAGA+AGG | 0.545252 | 8.1:-4968339 | MS.gene073289:CDS |
| CCACAGGGACTAACGATCAA+AGG | 0.545877 | 8.1:+4970935 | None:intergenic |
| ACTGAGAGGATTGTGGCTGC+AGG | 0.549542 | 8.1:-4970779 | MS.gene073289:CDS |
| CCGACACTGTTATTACATTG+TGG | 0.549682 | 8.1:-4967390 | MS.gene073289:CDS |
| ATATGATAAATCTAATGCAC+AGG | 0.550493 | 8.1:+4966535 | None:intergenic |
| CCTTTGATCGTTAGTCCCTG+TGG | 0.550626 | 8.1:-4970935 | MS.gene073289:CDS |
| GACCGTCTTCTAGTCGGCTC+CGG | 0.551757 | 8.1:-4972050 | MS.gene073289:CDS |
| TCTACTGACGGCTCTATGAT+GGG | 0.554140 | 8.1:-4968369 | MS.gene073289:CDS |
| AGGAATGTAAGCCTGGGGTA+AGG | 0.555165 | 8.1:-4970661 | MS.gene073289:CDS |
| TGAGCTTAATATGACTATGC+AGG | 0.557854 | 8.1:-4965207 | MS.gene073289:CDS |
| GCCGACTAGAAGACGGTCGC+CGG | 0.558169 | 8.1:+4972055 | None:intergenic |
| ATAGACTCCATCTGAAGAGA+AGG | 0.559080 | 8.1:+4970574 | None:intergenic |
| CAATACCTTCGTTACAGACC+AGG | 0.561180 | 8.1:+4966412 | None:intergenic |
| AGTATCGGTGTGACCGTCAA+GGG | 0.562310 | 8.1:+4971980 | None:intergenic |
| TATTCTTTCAGCCAATTGGG+AGG | 0.564177 | 8.1:-4966904 | MS.gene073289:intron |
| TGCGCTGACAGCCATATGAC+GGG | 0.567458 | 8.1:+4968039 | None:intergenic |
| ACTGAGCACCGAACGATGAA+GGG | 0.571623 | 8.1:-4972119 | None:intergenic |
| CTTTCAGATATGGGTTTGCA+GGG | 0.572213 | 8.1:-4967915 | MS.gene073289:intron |
| TCCTTATTCAGGCCAAGGGA+GGG | 0.574416 | 8.1:-4965331 | MS.gene073289:intron |
| TGGTGCAGAACCATAAGATA+CGG | 0.575595 | 8.1:+4966847 | None:intergenic |
| ATGCGCTGACAGCCATATGA+CGG | 0.576443 | 8.1:+4968038 | None:intergenic |
| TCTCTTCTATGGAGATAATG+AGG | 0.579103 | 8.1:-4969847 | MS.gene073289:CDS |
| CTCCTTATTCAGGCCAAGGG+AGG | 0.579287 | 8.1:-4965332 | MS.gene073289:intron |
| AGTTGGATGGAATGCAAGAA+CGG | 0.583563 | 8.1:+4970799 | None:intergenic |
| CATATTTCTTGAGAAGACAA+AGG | 0.583774 | 8.1:+4969175 | None:intergenic |
| CTTTGATCGTTAGTCCCTGT+GGG | 0.584126 | 8.1:-4970934 | MS.gene073289:CDS |
| CTACCTGAAGAAGGAATAGG+AGG | 0.587849 | 8.1:-4968330 | MS.gene073289:CDS |
| CAGTATCGGTGTGACCGTCA+AGG | 0.588682 | 8.1:+4971979 | None:intergenic |
| GGAGGAAACTTGTAAGGCGG+TGG | 0.590494 | 8.1:+4972001 | None:intergenic |
| CTTGGGAAACCATATTTAGT+GGG | 0.591029 | 8.1:-4964896 | MS.gene073289:CDS |
| CCATCCAACTGAGAGGATTG+TGG | 0.594328 | 8.1:-4970786 | MS.gene073289:CDS |
| CAATGAGCTCATTCTTGTCA+GGG | 0.598664 | 8.1:+4967365 | None:intergenic |
| GAACACAATTTGGTGAGGGG+TGG | 0.599664 | 8.1:+4964858 | None:intergenic |
| ATTCAGAACACAATTTGGTG+AGG | 0.601346 | 8.1:+4964853 | None:intergenic |
| TATGCCCAGAAATTTCCCAC+AGG | 0.602180 | 8.1:+4970919 | None:intergenic |
| ACTCTCCTTATTCAGGCCAA+GGG | 0.605057 | 8.1:-4965335 | MS.gene073289:intron |
| TGAACCGGGGACGACGATGA+CGG | 0.610939 | 8.1:+4971950 | None:intergenic |
| TAGGTAACAATGTTTGAACC+GGG | 0.612008 | 8.1:+4971936 | None:intergenic |
| ATGGTGGAGTTGTCTACTGA+CGG | 0.612208 | 8.1:-4968381 | MS.gene073289:CDS |
| CAGAACATCAATGACTGATG+AGG | 0.616046 | 8.1:-4970681 | MS.gene073289:CDS |
| CGCAACAGATCCTATTCCAG+TGG | 0.616768 | 8.1:-4966438 | MS.gene073289:CDS |
| GATGGAGAAAAGGACATCGA+TGG | 0.617383 | 8.1:-4964817 | MS.gene073289:CDS |
| TCAACCAGTTGACGAGGTCA+CGG | 0.618650 | 8.1:-4968550 | MS.gene073289:intron |
| TGCCGGAGCCGACTAGAAGA+CGG | 0.620612 | 8.1:+4972048 | None:intergenic |
| TAAACCAGAAGAGCGGTCAA+AGG | 0.622616 | 8.1:+4969129 | None:intergenic |
| AGATAATGAGGTCTATATCA+GGG | 0.622880 | 8.1:-4969835 | MS.gene073289:CDS |
| AGCAGAAAGACCAGACGCGT+CGG | 0.625011 | 8.1:-4967883 | MS.gene073289:CDS |
| CCACAATGTAATAACAGTGT+CGG | 0.626869 | 8.1:+4967390 | None:intergenic |
| CCACTAAATATGGTTTCCCA+AGG | 0.626904 | 8.1:+4964897 | None:intergenic |
| GATACCATCGTTATTGTCAC+CGG | 0.628026 | 8.1:-4971723 | MS.gene073289:CDS |
| GTGCTTTGGCAGCTAGACAC+CGG | 0.633010 | 8.1:-4970089 | MS.gene073289:CDS |
| TCAGAACACAATTTGGTGAG+GGG | 0.634558 | 8.1:+4964855 | None:intergenic |
| ATGCCCAGAAATTTCCCACA+GGG | 0.639581 | 8.1:+4970920 | None:intergenic |
| ATCGGTGTGACCGTCAAGGG+AGG | 0.641445 | 8.1:+4971983 | None:intergenic |
| TTGCATTCCATCCAACTGAG+AGG | 0.642642 | 8.1:-4970793 | MS.gene073289:CDS |
| GCTGTCAGCGCATCTTATGG+TGG | 0.643757 | 8.1:-4968028 | MS.gene073289:CDS |
| TCTCTTTGATCCATATGACA+AGG | 0.644718 | 8.1:-4965237 | MS.gene073289:CDS |
| TCCGGCGACCGTCTTCTAGT+CGG | 0.645660 | 8.1:-4972056 | MS.gene073289:CDS |
| GGACTAACGATCAAAGGGTG+AGG | 0.649796 | 8.1:+4970941 | None:intergenic |
| CCGGAGTTGGAGAAAGATGG+AGG | 0.653982 | 8.1:+4972074 | None:intergenic |
| GATGACGGAGGTGACAGTAT+CGG | 0.656068 | 8.1:+4971965 | None:intergenic |
| CCTGTGAGGTTCATAAACAA+GGG | 0.660359 | 8.1:+4968248 | None:intergenic |
| ACTTATATGACCCAACAGCA+TGG | 0.661286 | 8.1:+4967843 | None:intergenic |
| CTGATGAGGAATGTAAGCCT+GGG | 0.661805 | 8.1:-4970667 | MS.gene073289:CDS |
| ATGCCGAATCATGTTCCACA+TGG | 0.664291 | 8.1:-4970628 | MS.gene073289:CDS |
| TCTTCCGGTGACAATAACGA+TGG | 0.670887 | 8.1:+4971719 | None:intergenic |
| ATTTCTTGAGAAGACAAAGG+AGG | 0.675737 | 8.1:+4969178 | None:intergenic |
| CTGACAGCCATATGACGGGT+CGG | 0.676520 | 8.1:+4968043 | None:intergenic |
| GTGAGGTTCATAAACAAGGG+TGG | 0.679854 | 8.1:+4968251 | None:intergenic |
| GGTGGAGAAGATAGCGACGG+AGG | 0.680579 | 8.1:+4972025 | None:intergenic |
| GAGCACCGAACGATGAAGGG+AGG | 0.689052 | 8.1:-4972116 | None:intergenic |
| AAATTATCAACCAGTTGACG+AGG | 0.695676 | 8.1:-4968556 | MS.gene073289:CDS |
| GTCAGTAGACAACTCCACCA+TGG | 0.700569 | 8.1:+4968383 | None:intergenic |
| GGTGGTGGAGAAGATAGCGA+CGG | 0.700715 | 8.1:+4972022 | None:intergenic |
| ACCGGGGACGACGATGACGG+AGG | 0.701693 | 8.1:+4971953 | None:intergenic |
| AAGGGAGGAAACTTGTAAGG+CGG | 0.703168 | 8.1:+4971998 | None:intergenic |
| ATACTCCAAACAGACAGCTG+TGG | 0.705773 | 8.1:+4966827 | None:intergenic |
| GAATCTATGAAATACCGAAG+CGG | 0.706779 | 8.1:+4970035 | None:intergenic |
| GTTGCAGGTAGTAGTGACCA+TGG | 0.717858 | 8.1:-4968400 | MS.gene073289:intron |
| TGTTGTAGGAGAGACTCCAT+CGG | 0.719054 | 8.1:-4967341 | MS.gene073289:intron |
| AGGTAACAATGTTTGAACCG+GGG | 0.733423 | 8.1:+4971937 | None:intergenic |
| GGTCGGATGAAACGTAATAG+CGG | 0.734607 | 8.1:+4968060 | None:intergenic |
| ATCAGAGTGCCAATGCCATG+TGG | 0.739934 | 8.1:+4970613 | None:intergenic |
| AATCCGTTGACACACCTGTG+AGG | 0.748408 | 8.1:+4968234 | None:intergenic |
| CAGCCACTAAACCAGAAGAG+CGG | 0.753592 | 8.1:+4969122 | None:intergenic |
| TGATGAGGAATGTAAGCCTG+GGG | 0.761336 | 8.1:-4970666 | MS.gene073289:CDS |
| GCAGGTAGTAGTGACCATGG+TGG | 0.771993 | 8.1:-4968397 | MS.gene073289:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 4964809 | 4972126 | 4964809 | ID=MS.gene073289 |
| chr8.1 | mRNA | 4964809 | 4972126 | 4964809 | ID=MS.gene073289.t1;Parent=MS.gene073289 |
| chr8.1 | exon | 4971944 | 4972126 | 4971944 | ID=MS.gene073289.t1.exon1;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4971944 | 4972126 | 4971944 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4971574 | 4971747 | 4971574 | ID=MS.gene073289.t1.exon2;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4971574 | 4971747 | 4971574 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4970564 | 4970972 | 4970564 | ID=MS.gene073289.t1.exon3;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4970564 | 4970972 | 4970564 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4970013 | 4970131 | 4970013 | ID=MS.gene073289.t1.exon4;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4970013 | 4970131 | 4970013 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4969829 | 4969906 | 4969829 | ID=MS.gene073289.t1.exon5;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4969829 | 4969906 | 4969829 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4969060 | 4969200 | 4969060 | ID=MS.gene073289.t1.exon6;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4969060 | 4969200 | 4969060 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4968551 | 4968595 | 4968551 | ID=MS.gene073289.t1.exon7;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4968551 | 4968595 | 4968551 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4968249 | 4968415 | 4968249 | ID=MS.gene073289.t1.exon8;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4968249 | 4968415 | 4968249 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4968018 | 4968096 | 4968018 | ID=MS.gene073289.t1.exon9;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4968018 | 4968096 | 4968018 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4967845 | 4967930 | 4967845 | ID=MS.gene073289.t1.exon10;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4967845 | 4967930 | 4967845 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4967342 | 4967471 | 4967342 | ID=MS.gene073289.t1.exon11;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4967342 | 4967471 | 4967342 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4966783 | 4966915 | 4966783 | ID=MS.gene073289.t1.exon12;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4966783 | 4966915 | 4966783 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4966418 | 4966563 | 4966418 | ID=MS.gene073289.t1.exon13;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4966418 | 4966563 | 4966418 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4965180 | 4965342 | 4965180 | ID=MS.gene073289.t1.exon14;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4965180 | 4965342 | 4965180 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| chr8.1 | exon | 4964809 | 4965014 | 4964809 | ID=MS.gene073289.t1.exon15;Parent=MS.gene073289.t1 |
| chr8.1 | CDS | 4964809 | 4965014 | 4964809 | ID=cds.MS.gene073289.t1;Parent=MS.gene073289.t1 |
| Gene Sequence |
| Protein sequence |
