Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07389.t1 | XP_013468735.1 | 98.4 | 630 | 10 | 0 | 1 | 630 | 1 | 630 | 0.00E+00 | 1273.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07389.t1 | Q96524 | 64.6 | 630 | 192 | 7 | 5 | 628 | 6 | 610 | 1.5e-235 | 817.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07389.t1 | A0A072VLR3 | 98.4 | 630 | 10 | 0 | 1 | 630 | 1 | 630 | 0.0e+00 | 1273.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05016 | MS.gene07389 | 0.810345 | 1.21E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene07389 | 0.811002 | 8.71E-51 | -1.69E-46 |
| MS.gene057047 | MS.gene07389 | 0.812029 | 5.21E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07389.t1 | MTR_1g076190 | 98.571 | 630 | 9 | 0 | 1 | 630 | 1 | 630 | 0.0 | 1288 |
| MS.gene07389.t1 | MTR_1g076190 | 98.567 | 628 | 9 | 0 | 1 | 628 | 1 | 628 | 0.0 | 1284 |
| MS.gene07389.t1 | MTR_1g043190 | 76.910 | 602 | 132 | 6 | 4 | 601 | 2 | 600 | 0.0 | 937 |
| MS.gene07389.t1 | MTR_5g063920 | 55.719 | 612 | 244 | 7 | 2 | 596 | 5 | 606 | 0.0 | 696 |
| MS.gene07389.t1 | MTR_5g063920 | 55.719 | 612 | 244 | 7 | 2 | 596 | 5 | 606 | 0.0 | 696 |
| MS.gene07389.t1 | MTR_5g063920 | 54.018 | 448 | 182 | 5 | 165 | 596 | 3 | 442 | 9.53e-165 | 481 |
| MS.gene07389.t1 | MTR_4g011370 | 28.731 | 536 | 334 | 19 | 1 | 510 | 11 | 524 | 3.12e-51 | 186 |
| MS.gene07389.t1 | MTR_4g011370 | 28.717 | 491 | 306 | 17 | 1 | 466 | 11 | 482 | 3.10e-48 | 176 |
| MS.gene07389.t1 | MTR_4g011370 | 27.466 | 517 | 306 | 19 | 1 | 493 | 11 | 482 | 3.17e-43 | 163 |
| MS.gene07389.t1 | MTR_3g108700 | 28.163 | 490 | 278 | 18 | 2 | 446 | 94 | 554 | 3.64e-28 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07389.t1 | AT1G04400 | 69.340 | 561 | 159 | 4 | 5 | 562 | 6 | 556 | 0.0 | 808 |
| MS.gene07389.t1 | AT1G04400 | 69.340 | 561 | 159 | 4 | 5 | 562 | 6 | 556 | 0.0 | 808 |
| MS.gene07389.t1 | AT4G08920 | 59.555 | 539 | 207 | 5 | 7 | 536 | 15 | 551 | 0.0 | 667 |
| MS.gene07389.t1 | AT3G15620 | 29.735 | 528 | 315 | 17 | 6 | 501 | 26 | 529 | 3.95e-53 | 191 |
| MS.gene07389.t1 | AT5G24850 | 30.105 | 475 | 270 | 20 | 2 | 444 | 82 | 526 | 4.77e-34 | 137 |
| MS.gene07389.t1 | AT3G15620 | 29.009 | 424 | 249 | 15 | 6 | 397 | 26 | 429 | 7.38e-32 | 129 |
Find 153 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGCTTTAACAGAATTTA+TGG | 0.120110 | 1.2:-64387487 | MS.gene07389:CDS |
| TAAAATTGTCCTTCCTCTTT+AGG | 0.172518 | 1.2:+64388684 | None:intergenic |
| TCAGAAAGTGCCGGCATTTC+AGG | 0.176635 | 1.2:-64385590 | MS.gene07389:CDS |
| GCCATATCTATATCAATTAT+TGG | 0.201692 | 1.2:+64385784 | None:intergenic |
| TGCCTTACATATTCTCCTTC+TGG | 0.214099 | 1.2:+64385919 | None:intergenic |
| AATGGGGAATGAAGTATTTC+TGG | 0.219485 | 1.2:-64387017 | MS.gene07389:CDS |
| AATTTCCCACATCTTGAATA+TGG | 0.234109 | 1.2:+64385741 | None:intergenic |
| CTGTATTCCCTGTGTTTATA+TGG | 0.246769 | 1.2:-64388710 | MS.gene07389:CDS |
| CTAATAGGTAGTTCATTCTT+AGG | 0.252046 | 1.2:+64385565 | None:intergenic |
| CCTCATCTTCAAATCTAAAA+TGG | 0.261221 | 1.2:-64385366 | MS.gene07389:CDS |
| GTATTTCTGGGACACGCTTT+TGG | 0.272715 | 1.2:-64387004 | MS.gene07389:CDS |
| GAACCATTGTTTGGTTTAGA+AGG | 0.277961 | 1.2:-64388785 | MS.gene07389:CDS |
| ACTCATGAGAGAGCACTTCT+TGG | 0.306648 | 1.2:-64387222 | MS.gene07389:CDS |
| TCCTTAAGGAGGACAACTTT+TGG | 0.310889 | 1.2:+64385646 | None:intergenic |
| CTAAGAATGAACTACCTATT+AGG | 0.318143 | 1.2:-64385564 | MS.gene07389:CDS |
| AAATGTTCAATAGAGGATTT+AGG | 0.326416 | 1.2:-64387585 | MS.gene07389:CDS |
| CAAGCAGCATCAAAAGCTTC+TGG | 0.339324 | 1.2:-64385718 | MS.gene07389:CDS |
| CTCCAAGTCTTGAAGTTTGA+CGG | 0.343433 | 1.2:+64387168 | None:intergenic |
| TTATCAGTGAAAAGCTATAA+TGG | 0.349616 | 1.2:-64388008 | MS.gene07389:CDS |
| TGTTGCTTCTACCTTGGAAA+TGG | 0.350799 | 1.2:-64387035 | MS.gene07389:CDS |
| TGCAAGCATCTCTGCCAAAA+AGG | 0.354280 | 1.2:+64387921 | None:intergenic |
| TATCAGTGAAAAGCTATAAT+GGG | 0.356330 | 1.2:-64388007 | MS.gene07389:CDS |
| CTGTAGAGCAAGTGTCTTCA+TGG | 0.357346 | 1.2:+64385455 | None:intergenic |
| CTGGATTGTCCTCAATTCTA+AGG | 0.360401 | 1.2:+64388760 | None:intergenic |
| TCCAAAAGTTGTCCTCCTTA+AGG | 0.363395 | 1.2:-64385647 | MS.gene07389:CDS |
| CTCTTAGTCCAATTGCTCTA+AGG | 0.366113 | 1.2:+64387280 | None:intergenic |
| GTTGCTTCTACCTTGGAAAT+GGG | 0.372170 | 1.2:-64387034 | MS.gene07389:CDS |
| CACCACCTTGAAACTCTTCC+TGG | 0.373919 | 1.2:+64388660 | None:intergenic |
| TCCAATAATTGATATAGATA+TGG | 0.381151 | 1.2:-64385785 | MS.gene07389:CDS |
| AAACCAAGCAACGCGTTACT+AGG | 0.385656 | 1.2:-64387543 | MS.gene07389:CDS |
| TGCAGGAATGAGAGAACTTT+GGG | 0.399544 | 1.2:-64387115 | MS.gene07389:CDS |
| TCTATATCAATTATTGGATT+CGG | 0.400812 | 1.2:+64385790 | None:intergenic |
| GTTGTGTTTAACCATCTCTA+TGG | 0.405567 | 1.2:-64388510 | MS.gene07389:intron |
| TTATCCCCGTATCTCCATTT+CGG | 0.407052 | 1.2:-64387402 | MS.gene07389:CDS |
| TGGTCTCGAACCAGTGAAAC+AGG | 0.407880 | 1.2:+64388062 | None:intergenic |
| CTCATTCCTGCATCAACTAA+AGG | 0.411661 | 1.2:+64387126 | None:intergenic |
| CGTCCTAGTAACGCGTTGCT+TGG | 0.415085 | 1.2:+64387540 | None:intergenic |
| CGCTCAAGCTCGTGACCGTC+TGG | 0.421155 | 1.2:+64386928 | None:intergenic |
| ATGAGAGAACTTTGGGCTAC+AGG | 0.422513 | 1.2:-64387108 | MS.gene07389:CDS |
| CTTAGTGTGCTTAGAGCATC+AGG | 0.428735 | 1.2:-64385835 | MS.gene07389:CDS |
| ACAGACATGGAGCAAAGCTC+AGG | 0.431235 | 1.2:-64385328 | MS.gene07389:CDS |
| CAAGGTGGAATAAGCGAAAC+AGG | 0.434780 | 1.2:+64387885 | None:intergenic |
| TTTATCAGATCCTGTTTCAC+TGG | 0.435781 | 1.2:-64388072 | MS.gene07389:intron |
| GTAGCAATAGAACCATTGTT+TGG | 0.440981 | 1.2:-64388794 | MS.gene07389:CDS |
| CAGCACTAGCTGCTGCTGCT+AGG | 0.442114 | 1.2:-64388740 | MS.gene07389:CDS |
| ATGCAGGAATGAGAGAACTT+TGG | 0.446720 | 1.2:-64387116 | MS.gene07389:CDS |
| TCTTGAATATGGCTTGAGTC+AGG | 0.448589 | 1.2:+64385752 | None:intergenic |
| CTAGCAGCAGCAGCTAGTGC+TGG | 0.448793 | 1.2:+64388741 | None:intergenic |
| TGAAAATGTTGCTTCTACCT+TGG | 0.450718 | 1.2:-64387041 | MS.gene07389:CDS |
| TCTCGAACCAAGTGATTTCA+AGG | 0.453164 | 1.2:+64388605 | None:intergenic |
| TCACACTCAACTCTCCGAAA+TGG | 0.453446 | 1.2:+64387388 | None:intergenic |
| ACTATCTTTCACATGATTCA+CGG | 0.453888 | 1.2:+64385495 | None:intergenic |
| TTGAAACTATAACTCTGATT+CGG | 0.455014 | 1.2:+64387073 | None:intergenic |
| GGCTACCCTTTAGTTGATGC+AGG | 0.466577 | 1.2:-64387132 | MS.gene07389:CDS |
| TCATTCCTGCATCAACTAAA+GGG | 0.470820 | 1.2:+64387127 | None:intergenic |
| CTGAGTGGATCCATCATCCT+TGG | 0.471071 | 1.2:-64385867 | MS.gene07389:CDS |
| AGCACTAGCTGCTGCTGCTA+GGG | 0.473785 | 1.2:-64388739 | MS.gene07389:CDS |
| GAGATGCTTGCACAAGCAAA+TGG | 0.474718 | 1.2:-64387910 | MS.gene07389:CDS |
| CGGTCACGAGCTTGAGCGCT+TGG | 0.474915 | 1.2:-64386923 | MS.gene07389:CDS |
| TAGAAGGGACCTTAGAATTG+AGG | 0.477865 | 1.2:-64388769 | MS.gene07389:CDS |
| AACTCTCCGAAATGGAGATA+CGG | 0.477912 | 1.2:+64387396 | None:intergenic |
| CTCGGCTGGCAGTATATCTC+AGG | 0.480304 | 1.2:-64386958 | MS.gene07389:CDS |
| CTAGCTGCTGCTGCTAGGGA+TGG | 0.482748 | 1.2:-64388735 | MS.gene07389:CDS |
| AAAGAAAAGCTAGTGGAACT+TGG | 0.484127 | 1.2:-64388032 | MS.gene07389:CDS |
| ATCCGTCAAACTTCAAGACT+TGG | 0.488443 | 1.2:-64387170 | MS.gene07389:CDS |
| AGTCAAGAAATGTTCAATAG+AGG | 0.489309 | 1.2:-64387592 | MS.gene07389:CDS |
| CTAGGACGAGCATGGTCTCC+AGG | 0.489522 | 1.2:-64387525 | MS.gene07389:CDS |
| ACTCTCCGAAATGGAGATAC+GGG | 0.489556 | 1.2:+64387397 | None:intergenic |
| TTCTTAGGATCCTGAAATGC+CGG | 0.490558 | 1.2:+64385580 | None:intergenic |
| ATCCAGAAGGAGAATATGTA+AGG | 0.496224 | 1.2:-64385921 | MS.gene07389:CDS |
| GATCAGTCCTTGAAATCACT+TGG | 0.496518 | 1.2:-64388612 | MS.gene07389:CDS |
| TACTTCACTACTCCAAGAAT+AGG | 0.498999 | 1.2:-64387455 | MS.gene07389:CDS |
| GAGTACTCTCAATGCTCTCT+TGG | 0.499541 | 1.2:-64388562 | MS.gene07389:CDS |
| GGATCTGTTGTATGAGCCTT+GGG | 0.500509 | 1.2:-64387985 | MS.gene07389:CDS |
| TTTATCCAGGAAGAGTTTCA+AGG | 0.505143 | 1.2:-64388665 | MS.gene07389:CDS |
| TTGTCAGCATTGCTCCAACC+TGG | 0.505947 | 1.2:+64387507 | None:intergenic |
| AACCATTGTTTGGTTTAGAA+GGG | 0.509245 | 1.2:-64388784 | MS.gene07389:CDS |
| TGAAGAGAAGAGAAAGAACA+AGG | 0.511587 | 1.2:-64385524 | MS.gene07389:CDS |
| CTACTCCAAGAATAGGCAAA+AGG | 0.511893 | 1.2:-64387448 | MS.gene07389:CDS |
| AGCCGAGGATATCACATTCA+AGG | 0.517876 | 1.2:+64386974 | None:intergenic |
| AGCTTCTGGCTCTGAAGCAA+GGG | 0.519234 | 1.2:-64385704 | MS.gene07389:CDS |
| ATGTCTGTCTGTTCATGCCA+TGG | 0.522186 | 1.2:+64385343 | None:intergenic |
| ATGGGGAATGAAGTATTTCT+GGG | 0.522424 | 1.2:-64387016 | MS.gene07389:CDS |
| GAAGCAGTCTTTAGTTCACT+TGG | 0.523042 | 1.2:-64388634 | MS.gene07389:CDS |
| AAGCTTCTGGCTCTGAAGCA+AGG | 0.524562 | 1.2:-64385705 | MS.gene07389:CDS |
| CAGGAAGAGTTTCAAGGTGG+TGG | 0.530377 | 1.2:-64388659 | MS.gene07389:CDS |
| GAGCAAAGCTCAGGGAAAGA+TGG | 0.532049 | 1.2:-64385319 | MS.gene07389:intron |
| TTGTGGAACAGAAAATGAAT+AGG | 0.538477 | 1.2:+64385396 | None:intergenic |
| TCGCATAAAGCAGATATTGT+GGG | 0.539284 | 1.2:-64387346 | MS.gene07389:CDS |
| GGGATCTGTTGTATGAGCCT+TGG | 0.542320 | 1.2:-64387986 | MS.gene07389:CDS |
| CTCAAGCCATATTCAAGATG+TGG | 0.544153 | 1.2:-64385747 | MS.gene07389:CDS |
| AAGAATAGGCAAAAGGTTGG+TGG | 0.546393 | 1.2:-64387441 | MS.gene07389:CDS |
| GACGAGCATGGTCTCCAGGT+TGG | 0.548035 | 1.2:-64387521 | MS.gene07389:CDS |
| GTTGGCATTCTCGCCAACTC+AGG | 0.548803 | 1.2:+64385889 | None:intergenic |
| GTGGTGCATTCCAAGGATGA+TGG | 0.551180 | 1.2:+64385857 | None:intergenic |
| AAGGCAATGGCTACCTGAGT+TGG | 0.551193 | 1.2:-64385902 | MS.gene07389:CDS |
| TTGAATGTGATATCCTCGGC+TGG | 0.555532 | 1.2:-64386972 | MS.gene07389:CDS |
| AGGTTGGAGCAATGCTGACA+AGG | 0.556873 | 1.2:-64387505 | MS.gene07389:CDS |
| CTTCAAATCTAAAATGGCCA+TGG | 0.558284 | 1.2:-64385360 | MS.gene07389:CDS |
| TTGGGAAGTATATGATGAGA+AGG | 0.559387 | 1.2:-64387967 | MS.gene07389:CDS |
| ACTTGGAGACAAGGTAGGAC+TGG | 0.559715 | 1.2:-64387153 | MS.gene07389:CDS |
| TACTTCATTCCCCATTTCCA+AGG | 0.559892 | 1.2:+64387024 | None:intergenic |
| AGAGCATCAGGAGTCGAGCT+AGG | 0.561014 | 1.2:-64385823 | MS.gene07389:CDS |
| TTCTCATCATATACTTCCCA+AGG | 0.561654 | 1.2:+64387969 | None:intergenic |
| TGAGCGCTTGGATGATCCTG+AGG | 0.562126 | 1.2:-64386911 | MS.gene07389:intron |
| TTAATGTGCATACCTTCAGC+AGG | 0.564087 | 1.2:+64387852 | None:intergenic |
| GGATCTAGGTTTGATCCAGA+AGG | 0.564228 | 1.2:-64385934 | MS.gene07389:CDS |
| CTGTTTCGCTTATTCCACCT+TGG | 0.564355 | 1.2:-64387884 | MS.gene07389:CDS |
| GTTTATATGGTGTCCTAAAG+AGG | 0.569764 | 1.2:-64388697 | MS.gene07389:CDS |
| ACACTAAGTGGTGCATTCCA+AGG | 0.571610 | 1.2:+64385850 | None:intergenic |
| TGGCAATTAATTCCTGCTGA+AGG | 0.571990 | 1.2:-64387864 | MS.gene07389:intron |
| TTGCTTCTACCTTGGAAATG+GGG | 0.574156 | 1.2:-64387033 | MS.gene07389:CDS |
| GACCTTGAATGTGATATCCT+CGG | 0.577392 | 1.2:-64386976 | MS.gene07389:CDS |
| AGCTAATGATCAGAAAGTGC+CGG | 0.577971 | 1.2:-64385599 | MS.gene07389:CDS |
| CTCGCATAAAGCAGATATTG+TGG | 0.579056 | 1.2:-64387347 | MS.gene07389:CDS |
| TCAAGCCATATTCAAGATGT+GGG | 0.581508 | 1.2:-64385746 | MS.gene07389:CDS |
| GAAGATGAGGAACATTGTTG+TGG | 0.582759 | 1.2:+64385379 | None:intergenic |
| AAGGAGAATATGTAAGGCAA+TGG | 0.584996 | 1.2:-64385915 | MS.gene07389:CDS |
| CAGATATTGTGGGGAAACGA+AGG | 0.585311 | 1.2:-64387336 | MS.gene07389:CDS |
| GAGAACTTTGGGCTACAGGA+TGG | 0.589010 | 1.2:-64387104 | MS.gene07389:CDS |
| GGATGATGGATCCACTCAGT+TGG | 0.589489 | 1.2:+64385871 | None:intergenic |
| TCCAAGAATAGGCAAAAGGT+TGG | 0.591255 | 1.2:-64387444 | MS.gene07389:CDS |
| AGTGCTCTCTCATGAGTGAA+CGG | 0.592898 | 1.2:+64387228 | None:intergenic |
| GATGCTCTAAGCACACTAAG+TGG | 0.600085 | 1.2:+64385838 | None:intergenic |
| GGAAACGAAGGCAACAGTGT+TGG | 0.600244 | 1.2:-64387324 | MS.gene07389:CDS |
| CTGAGATATACTGCCAGCCG+AGG | 0.601742 | 1.2:+64386959 | None:intergenic |
| TTTGACGGATCAGCATTCCA+AGG | 0.608296 | 1.2:+64387183 | None:intergenic |
| TCAAGACTTGGAGACAAGGT+AGG | 0.609400 | 1.2:-64387158 | MS.gene07389:CDS |
| TCAGCAGGAATTAATTGCCA+AGG | 0.610860 | 1.2:+64387867 | None:intergenic |
| TTTCATGCAGGGGCGACAGG+AGG | 0.611889 | 1.2:-64384993 | MS.gene07389:intron |
| ATATGGTGTCCTAAAGAGGA+AGG | 0.616143 | 1.2:-64388693 | MS.gene07389:CDS |
| TTAGGACACCATATAAACAC+AGG | 0.616586 | 1.2:+64388702 | None:intergenic |
| CAGACATGGAGCAAAGCTCA+GGG | 0.619340 | 1.2:-64385327 | MS.gene07389:CDS |
| TTGACGGATCAGCATTCCAA+GGG | 0.619378 | 1.2:+64387184 | None:intergenic |
| AACTTCAAGACTTGGAGACA+AGG | 0.622090 | 1.2:-64387162 | MS.gene07389:CDS |
| CGCATAAAGCAGATATTGTG+GGG | 0.626353 | 1.2:-64387345 | MS.gene07389:CDS |
| AGCACTACTTACCATAGAGA+TGG | 0.626546 | 1.2:+64388499 | None:intergenic |
| CAACATCAAAGAAAAGCTAG+TGG | 0.627181 | 1.2:-64388039 | MS.gene07389:CDS |
| ATCTCAGGATGCTTACCAGA+CGG | 0.628095 | 1.2:-64386943 | MS.gene07389:CDS |
| ATCAGTGAAAAGCTATAATG+GGG | 0.635939 | 1.2:-64388006 | MS.gene07389:CDS |
| GTCCCTTCTAAACCAAACAA+TGG | 0.637331 | 1.2:+64388782 | None:intergenic |
| ACGCGTTACTAGGACGAGCA+TGG | 0.642349 | 1.2:-64387533 | MS.gene07389:CDS |
| GCAGGAATTAATTGCCAAGG+TGG | 0.644364 | 1.2:+64387870 | None:intergenic |
| TTAGCTGAAATAGTAGCAGA+CGG | 0.651586 | 1.2:+64385616 | None:intergenic |
| TGGGAAGTATATGATGAGAA+GGG | 0.652926 | 1.2:-64387966 | MS.gene07389:CDS |
| TGGCGAGAATGCCAACTGAG+TGG | 0.660213 | 1.2:-64385882 | MS.gene07389:CDS |
| ATTTCGGAGAGTTGAGTGTG+AGG | 0.666895 | 1.2:-64387386 | MS.gene07389:CDS |
| ATGGCATGAACAGACAGACA+TGG | 0.671080 | 1.2:-64385341 | MS.gene07389:CDS |
| CTCTCCGAAATGGAGATACG+GGG | 0.691586 | 1.2:+64387398 | None:intergenic |
| ATCCAGGAAGAGTTTCAAGG+TGG | 0.698355 | 1.2:-64388662 | MS.gene07389:CDS |
| ATACGGGGATAACAGCGAGG+TGG | 0.704873 | 1.2:+64387413 | None:intergenic |
| TAGGACACCATATAAACACA+GGG | 0.720737 | 1.2:+64388703 | None:intergenic |
| GAGATACGGGGATAACAGCG+AGG | 0.744456 | 1.2:+64387410 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GCTTATAACATATATTAAAA+TGG | + | chr1.2:64387535-64387554 | None:intergenic | 15.0% |
| !! | TGAATAAATTATTGAATACA+GGG | + | chr1.2:64386954-64386973 | None:intergenic | 15.0% |
| !! | TTGAATAAATTATTGAATAC+AGG | + | chr1.2:64386955-64386974 | None:intergenic | 15.0% |
| !!! | TTCATTTATAGTATAGTTTT+TGG | - | chr1.2:64385974-64385993 | MS.gene07389:intron | 15.0% |
| !! | TAAAATTTCAAAGTACAAAC+TGG | + | chr1.2:64387257-64387276 | None:intergenic | 20.0% |
| !! | TCCAATAATTGATATAGATA+TGG | - | chr1.2:64388002-64388021 | MS.gene07389:CDS | 20.0% |
| !! | TCTATATCAATTATTGGATT+CGG | + | chr1.2:64388000-64388019 | None:intergenic | 20.0% |
| !!! | ATCCTTAGGTTTATTTTTTT+AGG | - | chr1.2:64388611-64388630 | MS.gene07389:CDS | 20.0% |
| !!! | TAGATAATAGCTTTTATATC+TGG | - | chr1.2:64387130-64387149 | MS.gene07389:CDS | 20.0% |
| !!! | TATAGGAAACAAGTTTTATT+AGG | - | chr1.2:64387733-64387752 | MS.gene07389:intron | 20.0% |
| !!! | TCCTTAGGTTTATTTTTTTA+GGG | - | chr1.2:64388612-64388631 | MS.gene07389:CDS | 20.0% |
| !!! | TTTGGTTACACTTAATATTT+TGG | - | chr1.2:64385387-64385406 | MS.gene07389:CDS | 20.0% |
| !!! | TTTTTCTATTAGTAACATAG+AGG | - | chr1.2:64385439-64385458 | MS.gene07389:CDS | 20.0% |
| ! | AAATGTTCAATAGAGGATTT+AGG | - | chr1.2:64386202-64386221 | MS.gene07389:intron | 25.0% |
| ! | ATAAATTATTGAATACAGGG+TGG | + | chr1.2:64386951-64386970 | None:intergenic | 25.0% |
| ! | ATGTTACTAATAGAAAAAGC+CGG | + | chr1.2:64385437-64385456 | None:intergenic | 25.0% |
| ! | CAAATTAGATATTTAACGAG+CGG | + | chr1.2:64387185-64387204 | None:intergenic | 25.0% |
| ! | GCCATATCTATATCAATTAT+TGG | + | chr1.2:64388006-64388025 | None:intergenic | 25.0% |
| ! | TAAGTTCGTTTATTCAAACA+GGG | + | chr1.2:64387427-64387446 | None:intergenic | 25.0% |
| ! | TATCAGTGAAAAGCTATAAT+GGG | - | chr1.2:64385780-64385799 | MS.gene07389:CDS | 25.0% |
| ! | TCCCTAAAAAAATAAACCTA+AGG | + | chr1.2:64388616-64388635 | None:intergenic | 25.0% |
| ! | TTATCAGTGAAAAGCTATAA+TGG | - | chr1.2:64385779-64385798 | MS.gene07389:CDS | 25.0% |
| ! | TTGAAACTATAACTCTGATT+CGG | + | chr1.2:64386717-64386736 | None:intergenic | 25.0% |
| ! | TTGCTGTATCATAATAACTA+TGG | + | chr1.2:64386138-64386157 | None:intergenic | 25.0% |
| !! | AAAAGATGATACTTTCGTTT+TGG | + | chr1.2:64386101-64386120 | None:intergenic | 25.0% |
| !! | AAGAATTTTCATTTTCATGC+AGG | - | chr1.2:64388782-64388801 | MS.gene07389:CDS | 25.0% |
| !! | AGAATTTTCATTTTCATGCA+GGG | - | chr1.2:64388783-64388802 | MS.gene07389:CDS | 25.0% |
| !!! | GATTTGATTTGATTCATGTT+TGG | - | chr1.2:64385369-64385388 | MS.gene07389:CDS | 25.0% |
| !!! | GGTATTACTTTTTCGTATAT+AGG | - | chr1.2:64387716-64387735 | MS.gene07389:intron | 25.0% |
| !!! | TATAGTTTTTGGTTCTACAT+TGG | - | chr1.2:64385985-64386004 | MS.gene07389:intron | 25.0% |
| !!! | TTGCTTTTAACACAGATTAT+TGG | - | chr1.2:64387202-64387221 | MS.gene07389:CDS | 25.0% |
| AAACTATCTTGGAGATCTTA+TGG | - | chr1.2:64387564-64387583 | MS.gene07389:CDS | 30.0% | |
| AAGTAATACCAATCTCACTT+AGG | + | chr1.2:64387706-64387725 | None:intergenic | 30.0% | |
| AATTTCCCACATCTTGAATA+TGG | + | chr1.2:64388049-64388068 | None:intergenic | 30.0% | |
| ACAATCATGGTACAAAATGT+TGG | + | chr1.2:64385695-64385714 | None:intergenic | 30.0% | |
| ACCAAATTTATGCAGTTGAT+TGG | + | chr1.2:64387096-64387115 | None:intergenic | 30.0% | |
| ACCTAAGGATTAAATTGTCT+CGG | + | chr1.2:64388601-64388620 | None:intergenic | 30.0% | |
| ACTATCTTTCACATGATTCA+CGG | + | chr1.2:64388295-64388314 | None:intergenic | 30.0% | |
| AGGATCTGATAAAACAATCA+TGG | + | chr1.2:64385708-64385727 | None:intergenic | 30.0% | |
| AGTAAGTTAGTAGTTGTGTT+GGG | + | chr1.2:64386065-64386084 | None:intergenic | 30.0% | |
| AGTAATACCAATCTCACTTA+GGG | + | chr1.2:64387705-64387724 | None:intergenic | 30.0% | |
| AGTCAAGAAATGTTCAATAG+AGG | - | chr1.2:64386195-64386214 | MS.gene07389:intron | 30.0% | |
| ATCACTGTGTTTCATAATGA+GGG | - | chr1.2:64388706-64388725 | MS.gene07389:CDS | 30.0% | |
| ATCAGTGAAAAGCTATAATG+GGG | - | chr1.2:64385781-64385800 | MS.gene07389:CDS | 30.0% | |
| CAACTATTATAGTCATGCTA+AGG | + | chr1.2:64387367-64387386 | None:intergenic | 30.0% | |
| CCTCATCTTCAAATCTAAAA+TGG | - | chr1.2:64388421-64388440 | MS.gene07389:intron | 30.0% | |
| CTAAGAATGAACTACCTATT+AGG | - | chr1.2:64388223-64388242 | MS.gene07389:intron | 30.0% | |
| CTAATAGGTAGTTCATTCTT+AGG | + | chr1.2:64388225-64388244 | None:intergenic | 30.0% | |
| GAACTGTAAAGAAACATATC+AGG | + | chr1.2:64385656-64385675 | None:intergenic | 30.0% | |
| GTAAAATGCTGGATTCTTAT+TGG | - | chr1.2:64385532-64385551 | MS.gene07389:CDS | 30.0% | |
| GTAAGTTCGTTTATTCAAAC+AGG | + | chr1.2:64387428-64387447 | None:intergenic | 30.0% | |
| TAAAATTGTCCTTCCTCTTT+AGG | + | chr1.2:64385106-64385125 | None:intergenic | 30.0% | |
| TAGTAAGTTAGTAGTTGTGT+TGG | + | chr1.2:64386066-64386085 | None:intergenic | 30.0% | |
| TCCAATCAACTGCATAAATT+TGG | - | chr1.2:64387092-64387111 | MS.gene07389:CDS | 30.0% | |
| TTGTGGAACAGAAAATGAAT+AGG | + | chr1.2:64388394-64388413 | None:intergenic | 30.0% | |
| ! | AAAGAGTGAAGACTCATTTT+AGG | + | chr1.2:64388666-64388685 | None:intergenic | 30.0% |
| ! | AACCATTGTTTGGTTTAGAA+GGG | - | chr1.2:64385003-64385022 | MS.gene07389:intron | 30.0% |
| ! | AAGAGTGAAGACTCATTTTA+GGG | + | chr1.2:64388519-64388500 | None:intergenic | 30.0% |
| ! | AATGAACAGATAACAGCTTT+TGG | - | chr1.2:64387588-64387607 | MS.gene07389:CDS | 30.0% |
| ! | CAAGGCTTTAACAGAATTTA+TGG | - | chr1.2:64386300-64386319 | MS.gene07389:intron | 30.0% |
| ! | CATTTTGTTCTCTTCCTAAT+AGG | + | chr1.2:64388240-64388259 | None:intergenic | 30.0% |
| ! | CCATTTTAGATTTGAAGATG+AGG | + | chr1.2:64388424-64388443 | None:intergenic | 30.0% |
| ! | GAATTTTCATTTTCATGCAG+GGG | - | chr1.2:64388784-64388803 | MS.gene07389:CDS | 30.0% |
| ! | TAGCGTGATTTCTCTAATTT+TGG | - | chr1.2:64387807-64387826 | MS.gene07389:intron | 30.0% |
| ! | TCATTGTTTGTCCAGATTTT+AGG | - | chr1.2:64387832-64387851 | MS.gene07389:intron | 30.0% |
| !! | AGTTACTTCTATTTTTCTCG+TGG | + | chr1.2:64388556-64388575 | None:intergenic | 30.0% |
| !! | ATGATACTTTCGTTTTGGAT+AGG | + | chr1.2:64386096-64386115 | None:intergenic | 30.0% |
| !! | GCTATTTTCGTAAACTATCT+TGG | - | chr1.2:64387553-64387572 | MS.gene07389:CDS | 30.0% |
| !! | GTTTTATTAGGTTTGTTCGT+TGG | - | chr1.2:64387745-64387764 | MS.gene07389:intron | 30.0% |
| !! | TGTGAGGAAAGTTTTTCAAA+TGG | - | chr1.2:64386417-64386436 | MS.gene07389:intron | 30.0% |
| !!! | CACTCTTTTTTACACTTTGT+TGG | - | chr1.2:64388739-64388758 | MS.gene07389:CDS | 30.0% |
| AAAAATTGGCACATGAGGAT+GGG | + | chr1.2:64387053-64387072 | None:intergenic | 35.0% | |
| AAAGAAAAGCTAGTGGAACT+TGG | - | chr1.2:64385755-64385774 | MS.gene07389:CDS | 35.0% | |
| AAGCACTTGTGAGATTGTTT+GGG | + | chr1.2:64387643-64387662 | None:intergenic | 35.0% | |
| AAGGAGAATATGTAAGGCAA+TGG | - | chr1.2:64387872-64387891 | MS.gene07389:CDS | 35.0% | |
| ACCGAGACAATTTAATCCTT+AGG | - | chr1.2:64388597-64388616 | MS.gene07389:CDS | 35.0% | |
| AGATTGTTTGGGAGAGATTT+CGG | + | chr1.2:64387632-64387651 | None:intergenic | 35.0% | |
| AGTTATGTGTGGCAAAATGA+AGG | + | chr1.2:64385512-64385531 | None:intergenic | 35.0% | |
| ATCCAGAAGGAGAATATGTA+AGG | - | chr1.2:64387866-64387885 | MS.gene07389:CDS | 35.0% | |
| ATCTCAAAAATTGGCACATG+AGG | + | chr1.2:64387058-64387077 | None:intergenic | 35.0% | |
| CAAAAGTTGAAGAATCAAGC+CGG | - | chr1.2:64385415-64385434 | MS.gene07389:CDS | 35.0% | |
| CAAACCTAGATCCTAAAATC+TGG | + | chr1.2:64387846-64387865 | None:intergenic | 35.0% | |
| CAACATCAAAGAAAAGCTAG+TGG | - | chr1.2:64385748-64385767 | MS.gene07389:CDS | 35.0% | |
| CACACATAACTGTAAAATGC+TGG | - | chr1.2:64385521-64385540 | MS.gene07389:CDS | 35.0% | |
| CATCACTGTGTTTCATAATG+AGG | - | chr1.2:64388705-64388724 | MS.gene07389:CDS | 35.0% | |
| CTGTATTCCCTGTGTTTATA+TGG | - | chr1.2:64385077-64385096 | MS.gene07389:intron | 35.0% | |
| GCGGTGAAGTTTAATATGAA+AGG | + | chr1.2:64387166-64387185 | None:intergenic | 35.0% | |
| GTAGCAATAGAACCATTGTT+TGG | - | chr1.2:64384993-64385012 | MS.gene07389:intron | 35.0% | |
| GTTATGTGTGGCAAAATGAA+GGG | + | chr1.2:64385511-64385530 | None:intergenic | 35.0% | |
| GTTGTGTTTAACCATCTCTA+TGG | - | chr1.2:64385277-64385296 | MS.gene07389:intron | 35.0% | |
| GTTTATATGGTGTCCTAAAG+AGG | - | chr1.2:64385090-64385109 | MS.gene07389:intron | 35.0% | |
| TAAGCACTTGTGAGATTGTT+TGG | + | chr1.2:64387644-64387663 | None:intergenic | 35.0% | |
| TACTTCACTACTCCAAGAAT+AGG | - | chr1.2:64386332-64386351 | MS.gene07389:intron | 35.0% | |
| TAGGACACCATATAAACACA+GGG | + | chr1.2:64385087-64385106 | None:intergenic | 35.0% | |
| TCAAGCCATATTCAAGATGT+GGG | - | chr1.2:64388041-64388060 | MS.gene07389:CDS | 35.0% | |
| TCATTCCTGCATCAACTAAA+GGG | + | chr1.2:64386663-64386682 | None:intergenic | 35.0% | |
| TCGCATAAAGCAGATATTGT+GGG | - | chr1.2:64386441-64386460 | MS.gene07389:intron | 35.0% | |
| TCTTCACTCTTTACCATCAT+AGG | - | chr1.2:64388674-64388693 | MS.gene07389:CDS | 35.0% | |
| TGAAGAGAAGAGAAAGAACA+AGG | - | chr1.2:64388263-64388282 | MS.gene07389:intron | 35.0% | |
| TGATGTAGAAAGTCCTATGA+TGG | + | chr1.2:64388690-64388709 | None:intergenic | 35.0% | |
| TTAGCTGAAATAGTAGCAGA+CGG | + | chr1.2:64388174-64388193 | None:intergenic | 35.0% | |
| TTAGGACACCATATAAACAC+AGG | + | chr1.2:64385088-64385107 | None:intergenic | 35.0% | |
| TTCTCATCATATACTTCCCA+AGG | + | chr1.2:64385821-64385840 | None:intergenic | 35.0% | |
| TTTATCAGATCCTGTTTCAC+TGG | - | chr1.2:64385715-64385734 | MS.gene07389:CDS | 35.0% | |
| TTTATCCAGGAAGAGTTTCA+AGG | - | chr1.2:64385122-64385141 | MS.gene07389:intron | 35.0% | |
| ! | AATGGGGAATGAAGTATTTC+TGG | - | chr1.2:64386770-64386789 | MS.gene07389:intron | 35.0% |
| ! | ATGGGGAATGAAGTATTTCT+GGG | - | chr1.2:64386771-64386790 | MS.gene07389:intron | 35.0% |
| ! | CAGCATTTTACAGTTATGTG+TGG | + | chr1.2:64385523-64385542 | None:intergenic | 35.0% |
| ! | CTTCAAATCTAAAATGGCCA+TGG | - | chr1.2:64388427-64388446 | MS.gene07389:intron | 35.0% |
| ! | GAACCATTGTTTGGTTTAGA+AGG | - | chr1.2:64385002-64385021 | MS.gene07389:intron | 35.0% |
| ! | TGAAAATGTTGCTTCTACCT+TGG | - | chr1.2:64386746-64386765 | MS.gene07389:intron | 35.0% |
| ! | TGGGAAGTATATGATGAGAA+GGG | - | chr1.2:64385821-64385840 | MS.gene07389:CDS | 35.0% |
| ! | TTACAACCTTCGATCCTTTT+TGG | - | chr1.2:64385852-64385871 | MS.gene07389:CDS | 35.0% |
| ! | TTGGGAAGTATATGATGAGA+AGG | - | chr1.2:64385820-64385839 | MS.gene07389:CDS | 35.0% |
| !! | CTAGCTTTTCTTTGATGTTG+TGG | + | chr1.2:64385748-64385767 | None:intergenic | 35.0% |
| !! | GTCTCGGTTTATTTTCTTCA+TGG | + | chr1.2:64388585-64388604 | None:intergenic | 35.0% |
| !! | TCTTGTTGTGAGGATCTTTT+TGG | + | chr1.2:64387782-64387801 | None:intergenic | 35.0% |
| !! | TGGTAAGTAGTGCTGTTTAT+AGG | - | chr1.2:64385297-64385316 | MS.gene07389:intron | 35.0% |
| !! | TTCTACATTGGTAGCTTTGT+TGG | - | chr1.2:64385997-64386016 | MS.gene07389:intron | 35.0% |
| !!! | ATGTGCCAATTTTTGAGATC+TGG | - | chr1.2:64387059-64387078 | MS.gene07389:CDS | 35.0% |
| !!! | GAAGTTGCGTTATTTTTCTC+AGG | - | chr1.2:64388639-64388658 | MS.gene07389:CDS | 35.0% |
| !!! | TGTGCCAATTTTTGAGATCT+GGG | - | chr1.2:64387060-64387079 | MS.gene07389:CDS | 35.0% |
| !!! | TTGTCCAGATTTTAGGATCT+AGG | - | chr1.2:64387839-64387858 | MS.gene07389:intron | 35.0% |
| AAACAGTCCCTAAGTGAGAT+TGG | - | chr1.2:64387695-64387714 | MS.gene07389:intron | 40.0% | |
| AACTCTCCGAAATGGAGATA+CGG | + | chr1.2:64386394-64386413 | None:intergenic | 40.0% | |
| AACTTCAAGACTTGGAGACA+AGG | - | chr1.2:64386625-64386644 | MS.gene07389:intron | 40.0% | |
| AAGAATAGGCAAAAGGTTGG+TGG | - | chr1.2:64386346-64386365 | MS.gene07389:intron | 40.0% | |
| AATCTCACTTAGGGACTGTT+TGG | + | chr1.2:64387696-64387715 | None:intergenic | 40.0% | |
| ACCACCCAGATCTCAAAAAT+TGG | + | chr1.2:64387067-64387086 | None:intergenic | 40.0% | |
| AGAAAAACGTGACAAACCTC+AGG | + | chr1.2:64386895-64386914 | None:intergenic | 40.0% | |
| AGCACTACTTACCATAGAGA+TGG | + | chr1.2:64385291-64385310 | None:intergenic | 40.0% | |
| ATATGGTGTCCTAAAGAGGA+AGG | - | chr1.2:64385094-64385113 | MS.gene07389:intron | 40.0% | |
| ATCCGTCAAACTTCAAGACT+TGG | - | chr1.2:64386617-64386636 | MS.gene07389:intron | 40.0% | |
| ATGCAGGAATGAGAGAACTT+TGG | - | chr1.2:64386671-64386690 | MS.gene07389:intron | 40.0% | |
| CAAAAATTGGCACATGAGGA+TGG | + | chr1.2:64387054-64387073 | None:intergenic | 40.0% | |
| CAGAATGTGATGTGTGATAC+AGG | + | chr1.2:64386983-64387002 | None:intergenic | 40.0% | |
| CCTCTGTCGTAAAACTTCTT+TGG | + | chr1.2:64386036-64386055 | None:intergenic | 40.0% | |
| CGCATAAAGCAGATATTGTG+GGG | - | chr1.2:64386442-64386461 | MS.gene07389:intron | 40.0% | |
| CTACTCCAAGAATAGGCAAA+AGG | - | chr1.2:64386339-64386358 | MS.gene07389:intron | 40.0% | |
| CTCAAGCCATATTCAAGATG+TGG | - | chr1.2:64388040-64388059 | MS.gene07389:CDS | 40.0% | |
| CTCATTCCTGCATCAACTAA+AGG | + | chr1.2:64386664-64386683 | None:intergenic | 40.0% | |
| CTCCAAGTCTTGAAGTTTGA+CGG | + | chr1.2:64386622-64386641 | None:intergenic | 40.0% | |
| CTCGCATAAAGCAGATATTG+TGG | - | chr1.2:64386440-64386459 | MS.gene07389:intron | 40.0% | |
| CTCTTAGTCCAATTGCTCTA+AGG | + | chr1.2:64386510-64386529 | None:intergenic | 40.0% | |
| CTGGATTGTCCTCAATTCTA+AGG | + | chr1.2:64385030-64385049 | None:intergenic | 40.0% | |
| CTTAGATGCATTTCCCTCTT+AGG | - | chr1.2:64387401-64387420 | MS.gene07389:CDS | 40.0% | |
| GAAGATGAGGAACATTGTTG+TGG | + | chr1.2:64388411-64388430 | None:intergenic | 40.0% | |
| GACCTTGAATGTGATATCCT+CGG | - | chr1.2:64386811-64386830 | MS.gene07389:intron | 40.0% | |
| GATCAGTCCTTGAAATCACT+TGG | - | chr1.2:64385175-64385194 | MS.gene07389:intron | 40.0% | |
| GCAAAATGAAGGGTTCTCAT+CGG | + | chr1.2:64385501-64385520 | None:intergenic | 40.0% | |
| GTCCCTTCTAAACCAAACAA+TGG | + | chr1.2:64385008-64385027 | None:intergenic | 40.0% | |
| GTTGCTTCTACCTTGGAAAT+GGG | - | chr1.2:64386753-64386772 | MS.gene07389:intron | 40.0% | |
| TACTTCATTCCCCATTTCCA+AGG | + | chr1.2:64386766-64386785 | None:intergenic | 40.0% | |
| TAGAAGGGACCTTAGAATTG+AGG | - | chr1.2:64385018-64385037 | MS.gene07389:intron | 40.0% | |
| TATTCAAACAGGGCCTAAGA+GGG | + | chr1.2:64387417-64387436 | None:intergenic | 40.0% | |
| TCAGCAGGAATTAATTGCCA+AGG | + | chr1.2:64385923-64385942 | None:intergenic | 40.0% | |
| TCCAAAAGTTGTCCTCCTTA+AGG | - | chr1.2:64388140-64388159 | MS.gene07389:intron | 40.0% | |
| TCCAAGAATAGGCAAAAGGT+TGG | - | chr1.2:64386343-64386362 | MS.gene07389:intron | 40.0% | |
| TCCAGTAACGTTAAGCGAAA+GGG | + | chr1.2:64385597-64385616 | None:intergenic | 40.0% | |
| TCTCGAACCAAGTGATTTCA+AGG | + | chr1.2:64385185-64385204 | None:intergenic | 40.0% | |
| TCTCTTCTGCTGTGTATTAC+AGG | - | chr1.2:64386169-64386188 | MS.gene07389:intron | 40.0% | |
| TCTTGAATATGGCTTGAGTC+AGG | + | chr1.2:64388038-64388057 | None:intergenic | 40.0% | |
| TGCAGGAATGAGAGAACTTT+GGG | - | chr1.2:64386672-64386691 | MS.gene07389:intron | 40.0% | |
| TGCCTTACATATTCTCCTTC+TGG | + | chr1.2:64387871-64387890 | None:intergenic | 40.0% | |
| TGGCAATTAATTCCTGCTGA+AGG | - | chr1.2:64385923-64385942 | MS.gene07389:CDS | 40.0% | |
| TTAATGTGCATACCTTCAGC+AGG | + | chr1.2:64385938-64385957 | None:intergenic | 40.0% | |
| TTATCCCCGTATCTCCATTT+CGG | - | chr1.2:64386385-64386404 | MS.gene07389:intron | 40.0% | |
| TTATTCAAACAGGGCCTAAG+AGG | + | chr1.2:64387418-64387437 | None:intergenic | 40.0% | |
| TTCCAGTAACGTTAAGCGAA+AGG | + | chr1.2:64385598-64385617 | None:intergenic | 40.0% | |
| TTCTTAGGATCCTGAAATGC+CGG | + | chr1.2:64388210-64388229 | None:intergenic | 40.0% | |
| TTGCTTCTACCTTGGAAATG+GGG | - | chr1.2:64386754-64386773 | MS.gene07389:intron | 40.0% | |
| ! | ACAGCTTTTGGACATGTCAT+AGG | - | chr1.2:64387600-64387619 | MS.gene07389:intron | 40.0% |
| ! | ACCAACCTTTTGCCTATTCT+TGG | + | chr1.2:64386347-64386366 | None:intergenic | 40.0% |
| ! | AGAAGTTTTACGACAGAGGT+CGG | - | chr1.2:64386037-64386056 | MS.gene07389:intron | 40.0% |
| ! | AGCTAATGATCAGAAAGTGC+CGG | - | chr1.2:64388188-64388207 | MS.gene07389:intron | 40.0% |
| ! | CCAAAGAAGTTTTACGACAG+AGG | - | chr1.2:64386033-64386052 | MS.gene07389:intron | 40.0% |
| ! | CGCTATTTACTCTTGTTGTG+AGG | + | chr1.2:64387792-64387811 | None:intergenic | 40.0% |
| ! | CGGCTTGATTCTTCAACTTT+TGG | + | chr1.2:64385417-64385436 | None:intergenic | 40.0% |
| ! | CTGAAGGTATGCACATTAAC+AGG | - | chr1.2:64385939-64385958 | MS.gene07389:CDS | 40.0% |
| ! | GAAGCAGTCTTTAGTTCACT+TGG | - | chr1.2:64385153-64385172 | MS.gene07389:intron | 40.0% |
| ! | GAGGAAGGACAATTTTATCC+AGG | - | chr1.2:64385109-64385128 | MS.gene07389:intron | 40.0% |
| ! | GCTCTTTTCCTTAGAGCAAT+TGG | - | chr1.2:64386499-64386518 | MS.gene07389:intron | 40.0% |
| ! | TCCTTAAGGAGGACAACTTT+TGG | + | chr1.2:64388144-64388163 | None:intergenic | 40.0% |
| ! | TGTTGCTTCTACCTTGGAAA+TGG | - | chr1.2:64386752-64386771 | MS.gene07389:intron | 40.0% |
| !! | AGAGTGTCACAGTTTTTCTC+AGG | + | chr1.2:64388526-64388545 | None:intergenic | 40.0% |
| !!! | GACACTTGAGTTTTTTCCCT+TGG | - | chr1.2:64386587-64386606 | MS.gene07389:intron | 40.0% |
| AAACCAAGCAACGCGTTACT+AGG | - | chr1.2:64386244-64386263 | MS.gene07389:intron | 45.0% | |
| ACACTAAGTGGTGCATTCCA+AGG | + | chr1.2:64387940-64387959 | None:intergenic | 45.0% | |
| ACTCTCCGAAATGGAGATAC+GGG | + | chr1.2:64386393-64386412 | None:intergenic | 45.0% | |
| AGCCGAGGATATCACATTCA+AGG | + | chr1.2:64386816-64386835 | None:intergenic | 45.0% | |
| AGTGCTCTCTCATGAGTGAA+CGG | + | chr1.2:64386562-64386581 | None:intergenic | 45.0% | |
| ATCCAGGAAGAGTTTCAAGG+TGG | - | chr1.2:64385125-64385144 | MS.gene07389:intron | 45.0% | |
| ATCTCAGGATGCTTACCAGA+CGG | - | chr1.2:64386844-64386863 | MS.gene07389:intron | 45.0% | |
| ATGAGAGAACTTTGGGCTAC+AGG | - | chr1.2:64386679-64386698 | MS.gene07389:intron | 45.0% | |
| ATGGCATGAACAGACAGACA+TGG | - | chr1.2:64388446-64388465 | MS.gene07389:intron | 45.0% | |
| ATGTCTGTCTGTTCATGCCA+TGG | + | chr1.2:64388447-64388466 | None:intergenic | 45.0% | |
| ATTTCGGAGAGTTGAGTGTG+AGG | - | chr1.2:64386401-64386420 | MS.gene07389:intron | 45.0% | |
| CAAGCAGCATCAAAAGCTTC+TGG | - | chr1.2:64388069-64388088 | MS.gene07389:intron | 45.0% | |
| CAAGGTGGAATAAGCGAAAC+AGG | + | chr1.2:64385905-64385924 | None:intergenic | 45.0% | |
| CACTTAGGGACTGTTTGGAT+TGG | + | chr1.2:64387691-64387710 | None:intergenic | 45.0% | |
| CAGATATTGTGGGGAAACGA+AGG | - | chr1.2:64386451-64386470 | MS.gene07389:intron | 45.0% | |
| CCAGTAACGTTAAGCGAAAG+GGG | + | chr1.2:64385596-64385615 | None:intergenic | 45.0% | |
| CTCACAAGTGCTTATGTCAG+TGG | - | chr1.2:64387650-64387669 | MS.gene07389:intron | 45.0% | |
| CTGTAGAGCAAGTGTCTTCA+TGG | + | chr1.2:64388335-64388354 | None:intergenic | 45.0% | |
| CTGTTTCGCTTATTCCACCT+TGG | - | chr1.2:64385903-64385922 | MS.gene07389:CDS | 45.0% | |
| GAGATGCTTGCACAAGCAAA+TGG | - | chr1.2:64385877-64385896 | MS.gene07389:CDS | 45.0% | |
| GAGTACTCTCAATGCTCTCT+TGG | - | chr1.2:64385225-64385244 | MS.gene07389:intron | 45.0% | |
| GCAGGAATTAATTGCCAAGG+TGG | + | chr1.2:64385920-64385939 | None:intergenic | 45.0% | |
| GGATCTAGGTTTGATCCAGA+AGG | - | chr1.2:64387853-64387872 | MS.gene07389:intron | 45.0% | |
| GGATCTGTTGTATGAGCCTT+GGG | - | chr1.2:64385802-64385821 | MS.gene07389:CDS | 45.0% | |
| TCAAGACTTGGAGACAAGGT+AGG | - | chr1.2:64386629-64386648 | MS.gene07389:intron | 45.0% | |
| TCACACTCAACTCTCCGAAA+TGG | + | chr1.2:64386402-64386421 | None:intergenic | 45.0% | |
| TCTCTGCCAAAAAGGATCGA+AGG | + | chr1.2:64385861-64385880 | None:intergenic | 45.0% | |
| TGCAAGCATCTCTGCCAAAA+AGG | + | chr1.2:64385869-64385888 | None:intergenic | 45.0% | |
| TTGAATGTGATATCCTCGGC+TGG | - | chr1.2:64386815-64386834 | MS.gene07389:intron | 45.0% | |
| ! | CTTAGTGTGCTTAGAGCATC+AGG | - | chr1.2:64387952-64387971 | MS.gene07389:CDS | 45.0% |
| ! | GATGCTCTAAGCACACTAAG+TGG | + | chr1.2:64387952-64387971 | None:intergenic | 45.0% |
| ! | TTGACGGATCAGCATTCCAA+GGG | + | chr1.2:64386606-64386625 | None:intergenic | 45.0% |
| ! | TTTGACGGATCAGCATTCCA+AGG | + | chr1.2:64386607-64386626 | None:intergenic | 45.0% |
| !! | ACGGAGCTTTTTCCTTAAGG+AGG | + | chr1.2:64388155-64388174 | None:intergenic | 45.0% |
| !! | ACTCATGAGAGAGCACTTCT+TGG | - | chr1.2:64386565-64386584 | MS.gene07389:intron | 45.0% |
| !! | CAGACGGAGCTTTTTCCTTA+AGG | + | chr1.2:64388158-64388177 | None:intergenic | 45.0% |
| !!! | GCCAATTTTTGAGATCTGGG+TGG | - | chr1.2:64387063-64387082 | MS.gene07389:CDS | 45.0% |
| !!! | GTATTTCTGGGACACGCTTT+TGG | - | chr1.2:64386783-64386802 | MS.gene07389:intron | 45.0% |
| AAGGCAATGGCTACCTGAGT+TGG | - | chr1.2:64387885-64387904 | MS.gene07389:CDS | 50.0% | |
| ACAGACATGGAGCAAAGCTC+AGG | - | chr1.2:64388459-64388478 | MS.gene07389:intron | 50.0% | |
| ACTTGGAGACAAGGTAGGAC+TGG | - | chr1.2:64386634-64386653 | MS.gene07389:intron | 50.0% | |
| AGGTTGGAGCAATGCTGACA+AGG | - | chr1.2:64386282-64386301 | MS.gene07389:intron | 50.0% | |
| CACCACCTTGAAACTCTTCC+TGG | + | chr1.2:64385130-64385149 | None:intergenic | 50.0% | |
| CAGACATGGAGCAAAGCTCA+GGG | - | chr1.2:64388460-64388479 | MS.gene07389:intron | 50.0% | |
| CAGGAAGAGTTTCAAGGTGG+TGG | - | chr1.2:64385128-64385147 | MS.gene07389:intron | 50.0% | |
| CCCCTTTCGCTTAACGTTAC+TGG | - | chr1.2:64385593-64385612 | MS.gene07389:CDS | 50.0% | |
| CTCTCCGAAATGGAGATACG+GGG | + | chr1.2:64386392-64386411 | None:intergenic | 50.0% | |
| CTGAGTGGATCCATCATCCT+TGG | - | chr1.2:64387920-64387939 | MS.gene07389:CDS | 50.0% | |
| GAGAACTTTGGGCTACAGGA+TGG | - | chr1.2:64386683-64386702 | MS.gene07389:intron | 50.0% | |
| GAGCAAAGCTCAGGGAAAGA+TGG | - | chr1.2:64388468-64388487 | MS.gene07389:intron | 50.0% | |
| GGAAACGAAGGCAACAGTGT+TGG | - | chr1.2:64386463-64386482 | MS.gene07389:intron | 50.0% | |
| GGGATCTGTTGTATGAGCCT+TGG | - | chr1.2:64385801-64385820 | MS.gene07389:CDS | 50.0% | |
| GTGGTGCATTCCAAGGATGA+TGG | + | chr1.2:64387933-64387952 | None:intergenic | 50.0% | |
| TGGTCTCGAACCAGTGAAAC+AGG | + | chr1.2:64385728-64385747 | None:intergenic | 50.0% | |
| TTGTCAGCATTGCTCCAACC+TGG | + | chr1.2:64386283-64386302 | None:intergenic | 50.0% | |
| ! | GGCTACCCTTTAGTTGATGC+AGG | - | chr1.2:64386655-64386674 | MS.gene07389:intron | 50.0% |
| ! | GGCTTGAGTCAGGTTTTCTC+TGG | + | chr1.2:64388028-64388047 | None:intergenic | 50.0% |
| !! | AAGCTTCTGGCTCTGAAGCA+AGG | - | chr1.2:64388082-64388101 | MS.gene07389:intron | 50.0% |
| !! | AGCTTCTGGCTCTGAAGCAA+GGG | - | chr1.2:64388083-64388102 | MS.gene07389:intron | 50.0% |
| !! | GGATGATGGATCCACTCAGT+TGG | + | chr1.2:64387919-64387938 | None:intergenic | 50.0% |
| !! | TCAGAAAGTGCCGGCATTTC+AGG | - | chr1.2:64388197-64388216 | MS.gene07389:intron | 50.0% |
| ACGCGTTACTAGGACGAGCA+TGG | - | chr1.2:64386254-64386273 | MS.gene07389:intron | 55.0% | |
| AGCACTAGCTGCTGCTGCTA+GGG | - | chr1.2:64385048-64385067 | MS.gene07389:intron | 55.0% | |
| ATACGGGGATAACAGCGAGG+TGG | + | chr1.2:64386377-64386396 | None:intergenic | 55.0% | |
| CGTCCTAGTAACGCGTTGCT+TGG | + | chr1.2:64386250-64386269 | None:intergenic | 55.0% | |
| CTCGGCTGGCAGTATATCTC+AGG | - | chr1.2:64386829-64386848 | MS.gene07389:intron | 55.0% | |
| CTGAGATATACTGCCAGCCG+AGG | + | chr1.2:64386831-64386850 | None:intergenic | 55.0% | |
| GAGATACGGGGATAACAGCG+AGG | + | chr1.2:64386380-64386399 | None:intergenic | 55.0% | |
| GTTGGCATTCTCGCCAACTC+AGG | + | chr1.2:64387901-64387920 | None:intergenic | 55.0% | |
| TGAGCGCTTGGATGATCCTG+AGG | - | chr1.2:64386876-64386895 | MS.gene07389:intron | 55.0% | |
| TGGCGAGAATGCCAACTGAG+TGG | - | chr1.2:64387905-64387924 | MS.gene07389:CDS | 55.0% | |
| ! | AGAGCATCAGGAGTCGAGCT+AGG | - | chr1.2:64387964-64387983 | MS.gene07389:CDS | 55.0% |
| ! | CATTTTCATGCAGGGGCGAC+AGG | - | chr1.2:64388791-64388810 | MS.gene07389:CDS | 55.0% |
| CAGCACTAGCTGCTGCTGCT+AGG | - | chr1.2:64385047-64385066 | MS.gene07389:intron | 60.0% | |
| CTAGCAGCAGCAGCTAGTGC+TGG | + | chr1.2:64385049-64385068 | None:intergenic | 60.0% | |
| CTAGCTGCTGCTGCTAGGGA+TGG | - | chr1.2:64385052-64385071 | MS.gene07389:intron | 60.0% | |
| CTAGGACGAGCATGGTCTCC+AGG | - | chr1.2:64386262-64386281 | MS.gene07389:intron | 60.0% | |
| GACGAGCATGGTCTCCAGGT+TGG | - | chr1.2:64386266-64386285 | MS.gene07389:intron | 60.0% | |
| TTTCATGCAGGGGCGACAGG+AGG | - | chr1.2:64388794-64388813 | MS.gene07389:CDS | 60.0% | |
| CGCTCAAGCTCGTGACCGTC+TGG | + | chr1.2:64386862-64386881 | None:intergenic | 65.0% | |
| CGGTCACGAGCTTGAGCGCT+TGG | - | chr1.2:64386864-64386883 | MS.gene07389:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 64384989 | 64388820 | 64384989 | ID=MS.gene07389 |
| chr1.2 | mRNA | 64384989 | 64388820 | 64384989 | ID=MS.gene07389.t1;Parent=MS.gene07389 |
| chr1.2 | exon | 64388511 | 64388820 | 64388511 | ID=MS.gene07389.t1.exon1;Parent=MS.gene07389.t1 |
| chr1.2 | CDS | 64388511 | 64388820 | 64388511 | ID=cds.MS.gene07389.t1;Parent=MS.gene07389.t1 |
| chr1.2 | exon | 64387865 | 64388086 | 64387865 | ID=MS.gene07389.t1.exon2;Parent=MS.gene07389.t1 |
| chr1.2 | CDS | 64387865 | 64388086 | 64387865 | ID=cds.MS.gene07389.t1;Parent=MS.gene07389.t1 |
| chr1.2 | exon | 64386912 | 64387618 | 64386912 | ID=MS.gene07389.t1.exon3;Parent=MS.gene07389.t1 |
| chr1.2 | CDS | 64386912 | 64387618 | 64386912 | ID=cds.MS.gene07389.t1;Parent=MS.gene07389.t1 |
| chr1.2 | exon | 64385320 | 64385962 | 64385320 | ID=MS.gene07389.t1.exon4;Parent=MS.gene07389.t1 |
| chr1.2 | CDS | 64385320 | 64385962 | 64385320 | ID=cds.MS.gene07389.t1;Parent=MS.gene07389.t1 |
| chr1.2 | exon | 64384989 | 64385005 | 64384989 | ID=MS.gene07389.t1.exon5;Parent=MS.gene07389.t1 |
| chr1.2 | CDS | 64384989 | 64385005 | 64384989 | ID=cds.MS.gene07389.t1;Parent=MS.gene07389.t1 |
| Gene Sequence |
| Protein sequence |
