Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07400.t1 | XP_003591809.1 | 98.7 | 391 | 4 | 1 | 1 | 391 | 1 | 390 | 7.10E-208 | 733 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07400.t1 | Q9FLG2 | 78.2 | 395 | 81 | 4 | 1 | 391 | 1 | 394 | 1.2e-163 | 577.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07400.t1 | G7I479 | 98.7 | 391 | 4 | 1 | 1 | 391 | 1 | 390 | 5.1e-208 | 733.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05686 | MS.gene07400 | 0.805703 | 1.17E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene07400 | 0.813961 | 1.96E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07400.t1 | MTR_1g076210 | 98.721 | 391 | 4 | 1 | 1 | 391 | 1 | 390 | 0.0 | 786 |
| MS.gene07400.t1 | MTR_1g093280 | 98.721 | 391 | 4 | 1 | 1 | 391 | 1 | 390 | 0.0 | 786 |
| MS.gene07400.t1 | MTR_1g040495 | 66.404 | 381 | 114 | 5 | 13 | 391 | 2 | 370 | 0.0 | 509 |
| MS.gene07400.t1 | MTR_7g096170 | 72.194 | 392 | 104 | 5 | 1 | 391 | 1 | 388 | 1.28e-173 | 489 |
| MS.gene07400.t1 | MTR_7g096170 | 73.171 | 369 | 94 | 5 | 1 | 368 | 1 | 365 | 1.55e-161 | 458 |
| MS.gene07400.t1 | MTR_7g096170 | 73.129 | 294 | 74 | 5 | 99 | 391 | 2 | 291 | 5.35e-123 | 357 |
| MS.gene07400.t1 | MTR_7g096170 | 71.338 | 314 | 85 | 5 | 1 | 313 | 1 | 310 | 1.17e-122 | 357 |
| MS.gene07400.t1 | MTR_8g088670 | 50.000 | 378 | 181 | 4 | 17 | 391 | 50 | 422 | 2.40e-119 | 353 |
| MS.gene07400.t1 | MTR_2g105270 | 47.805 | 410 | 173 | 9 | 16 | 389 | 42 | 446 | 1.44e-114 | 342 |
| MS.gene07400.t1 | MTR_5g005240 | 44.545 | 440 | 180 | 9 | 3 | 389 | 15 | 443 | 1.60e-109 | 328 |
| MS.gene07400.t1 | MTR_2g105270 | 49.249 | 333 | 133 | 7 | 16 | 314 | 42 | 372 | 1.90e-92 | 284 |
| MS.gene07400.t1 | MTR_1g076220 | 59.091 | 242 | 67 | 2 | 150 | 391 | 21 | 230 | 1.38e-89 | 270 |
| MS.gene07400.t1 | MTR_5g045590 | 39.798 | 397 | 192 | 4 | 16 | 389 | 31 | 403 | 2.19e-87 | 270 |
| MS.gene07400.t1 | MTR_1g106065 | 39.030 | 433 | 204 | 8 | 1 | 388 | 1 | 418 | 2.05e-84 | 263 |
| MS.gene07400.t1 | MTR_8g088670 | 49.129 | 287 | 137 | 4 | 17 | 299 | 50 | 331 | 4.13e-82 | 255 |
| MS.gene07400.t1 | MTR_8g088670 | 48.780 | 287 | 138 | 4 | 17 | 299 | 50 | 331 | 1.11e-81 | 254 |
| MS.gene07400.t1 | MTR_2g105270 | 47.170 | 318 | 132 | 7 | 16 | 299 | 42 | 357 | 1.17e-81 | 254 |
| MS.gene07400.t1 | MTR_1g040475 | 63.959 | 197 | 60 | 3 | 13 | 208 | 6 | 192 | 9.21e-81 | 248 |
| MS.gene07400.t1 | MTR_8g094880 | 38.500 | 400 | 213 | 6 | 18 | 389 | 28 | 422 | 1.48e-79 | 251 |
| MS.gene07400.t1 | MTR_8g094905 | 38.500 | 400 | 213 | 6 | 18 | 389 | 28 | 422 | 1.48e-79 | 251 |
| MS.gene07400.t1 | MTR_1g093370 | 63.587 | 184 | 36 | 1 | 208 | 391 | 16 | 168 | 2.13e-73 | 226 |
| MS.gene07400.t1 | MTR_1g040455 | 69.697 | 99 | 30 | 0 | 293 | 391 | 1 | 99 | 5.11e-48 | 159 |
| MS.gene07400.t1 | MTR_2g059110 | 76.087 | 92 | 14 | 1 | 1 | 92 | 1 | 84 | 5.64e-39 | 135 |
| MS.gene07400.t1 | MTR_2g059120 | 84.127 | 63 | 10 | 0 | 30 | 92 | 20 | 82 | 4.34e-29 | 109 |
| MS.gene07400.t1 | MTR_2g100150 | 36.723 | 177 | 71 | 6 | 23 | 195 | 14 | 153 | 1.16e-20 | 88.6 |
| MS.gene07400.t1 | MTR_1g055050 | 31.020 | 245 | 134 | 6 | 145 | 389 | 51 | 260 | 7.86e-20 | 88.6 |
| MS.gene07400.t1 | MTR_2g084565 | 23.967 | 363 | 226 | 10 | 33 | 388 | 124 | 443 | 1.74e-16 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07400.t1 | AT5G64560 | 77.722 | 395 | 83 | 4 | 1 | 391 | 1 | 394 | 0.0 | 565 |
| MS.gene07400.t1 | AT5G09690 | 71.970 | 396 | 96 | 4 | 1 | 391 | 12 | 397 | 0.0 | 560 |
| MS.gene07400.t1 | AT5G09690 | 71.970 | 396 | 96 | 4 | 1 | 391 | 1 | 386 | 0.0 | 560 |
| MS.gene07400.t1 | AT5G64560 | 79.891 | 368 | 69 | 4 | 1 | 364 | 1 | 367 | 0.0 | 538 |
| MS.gene07400.t1 | AT5G09690 | 73.984 | 369 | 81 | 4 | 1 | 364 | 12 | 370 | 0.0 | 531 |
| MS.gene07400.t1 | AT5G09690 | 67.677 | 396 | 98 | 5 | 1 | 391 | 1 | 371 | 6.87e-178 | 499 |
| MS.gene07400.t1 | AT5G09690 | 73.556 | 329 | 72 | 4 | 1 | 324 | 12 | 330 | 3.04e-161 | 456 |
| MS.gene07400.t1 | AT5G09690 | 73.556 | 329 | 72 | 4 | 1 | 324 | 12 | 330 | 3.04e-161 | 456 |
| MS.gene07400.t1 | AT5G09690 | 73.414 | 331 | 73 | 4 | 1 | 326 | 1 | 321 | 3.04e-161 | 456 |
| MS.gene07400.t1 | AT5G09690 | 73.556 | 329 | 72 | 4 | 1 | 324 | 1 | 319 | 4.28e-161 | 456 |
| MS.gene07400.t1 | AT5G09690 | 73.780 | 328 | 71 | 4 | 1 | 323 | 12 | 329 | 5.95e-161 | 456 |
| MS.gene07400.t1 | AT5G09690 | 73.780 | 328 | 71 | 4 | 1 | 323 | 1 | 318 | 6.44e-161 | 455 |
| MS.gene07400.t1 | AT5G09690 | 69.863 | 292 | 73 | 4 | 1 | 287 | 1 | 282 | 2.59e-130 | 376 |
| MS.gene07400.t1 | AT5G09690 | 69.863 | 292 | 73 | 4 | 1 | 287 | 12 | 293 | 3.60e-130 | 376 |
| MS.gene07400.t1 | AT5G09690 | 69.863 | 292 | 73 | 4 | 1 | 287 | 12 | 293 | 3.60e-130 | 376 |
| MS.gene07400.t1 | AT5G09690 | 69.863 | 292 | 73 | 4 | 1 | 287 | 12 | 293 | 3.60e-130 | 376 |
| MS.gene07400.t1 | AT3G58970 | 49.620 | 395 | 187 | 6 | 5 | 391 | 46 | 436 | 3.81e-118 | 350 |
| MS.gene07400.t1 | AT1G80900 | 49.254 | 402 | 173 | 8 | 16 | 389 | 43 | 441 | 1.83e-117 | 349 |
| MS.gene07400.t1 | AT1G80900 | 49.254 | 402 | 173 | 8 | 16 | 389 | 43 | 441 | 1.83e-117 | 349 |
| MS.gene07400.t1 | AT1G16010 | 47.654 | 405 | 174 | 6 | 16 | 389 | 43 | 440 | 3.75e-117 | 348 |
| MS.gene07400.t1 | AT1G16010 | 47.654 | 405 | 174 | 6 | 16 | 389 | 43 | 440 | 3.75e-117 | 348 |
| MS.gene07400.t1 | AT1G16010 | 47.654 | 405 | 174 | 6 | 16 | 389 | 43 | 440 | 3.75e-117 | 348 |
| MS.gene07400.t1 | AT5G09720 | 63.986 | 286 | 87 | 6 | 7 | 286 | 1 | 276 | 6.32e-116 | 339 |
| MS.gene07400.t1 | AT5G09720 | 63.986 | 286 | 87 | 6 | 7 | 286 | 1 | 276 | 6.32e-116 | 339 |
| MS.gene07400.t1 | AT3G19640 | 41.324 | 438 | 184 | 6 | 25 | 389 | 46 | 483 | 2.23e-98 | 301 |
| MS.gene07400.t1 | AT2G03620 | 40.000 | 410 | 197 | 6 | 4 | 386 | 29 | 416 | 2.16e-87 | 271 |
| MS.gene07400.t1 | AT2G03620 | 40.000 | 410 | 197 | 6 | 4 | 386 | 29 | 416 | 2.16e-87 | 271 |
| MS.gene07400.t1 | AT4G28580 | 39.005 | 382 | 204 | 8 | 17 | 389 | 46 | 407 | 9.78e-82 | 256 |
Find 88 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGATTAGTAGTCGTAATT+TGG | 0.183917 | 1.2:+64280925 | MS.gene07400:intron |
| TGGTCATCATTCCAAGTATA+TGG | 0.223043 | 1.2:-64282459 | None:intergenic |
| TTGGAGCTCTTTCTTAGCTC+TGG | 0.350919 | 1.2:+64282381 | MS.gene07400:CDS |
| CTCTGCAGTTCCTCAACAAC+AGG | 0.353073 | 1.2:-64280146 | None:intergenic |
| GCTTATTTCATGCAAATTGA+TGG | 0.365944 | 1.2:+64281644 | MS.gene07400:CDS |
| CCATCGTAATCAGCTTATTC+AGG | 0.384521 | 1.2:+64282236 | MS.gene07400:CDS |
| TGATGAATGGCACTCAGTTT+AGG | 0.385506 | 1.2:-64280176 | None:intergenic |
| TTGCCTAGCTTTCTACTCTC+TGG | 0.391769 | 1.2:+64282410 | MS.gene07400:CDS |
| TCTTACCCCTCTACTATTCT+CGG | 0.399018 | 1.2:+64278980 | MS.gene07400:CDS |
| ACCATGGATACATGTTCAAA+TGG | 0.402182 | 1.2:+64282478 | MS.gene07400:CDS |
| TTGAATGTTAATGTAATCTT+CGG | 0.403636 | 1.2:-64282111 | None:intergenic |
| AGTAGAGGGGTAAGAGAGCA+AGG | 0.409878 | 1.2:-64278972 | None:intergenic |
| AGATGAGCTTGAACAATTGC+TGG | 0.412354 | 1.2:+64281330 | MS.gene07400:CDS |
| CTGCCTTTCTAGACAAATAT+AGG | 0.420299 | 1.2:-64281375 | None:intergenic |
| ACCGTTTGAGTTCCGTGCAC+TGG | 0.421008 | 1.2:+64280442 | MS.gene07400:CDS |
| GCATGACCTGATCCACTAAC+TGG | 0.430269 | 1.2:-64281409 | None:intergenic |
| ATATCCTTGATCCTACGGTT+GGG | 0.431189 | 1.2:-64281450 | None:intergenic |
| GCTGGATGATGACGATGATA+TGG | 0.432553 | 1.2:+64281348 | MS.gene07400:CDS |
| GCATGAACATCCCATATACT+TGG | 0.435967 | 1.2:+64282448 | MS.gene07400:CDS |
| GCTTTCTACTCTCTGGTGGC+TGG | 0.439170 | 1.2:+64282417 | MS.gene07400:CDS |
| ACAAGAGCCTGTGGGTCAGC+AGG | 0.441511 | 1.2:-64278815 | None:intergenic |
| GTGGATCAGGTCATGCAAAC+TGG | 0.441917 | 1.2:+64281416 | MS.gene07400:CDS |
| GCATCACCAGTTAGTGGATC+AGG | 0.446171 | 1.2:+64281403 | MS.gene07400:CDS |
| GAAGGCTATTGTTCTTAACT+TGG | 0.448750 | 1.2:+64279009 | MS.gene07400:CDS |
| AATACTTGCTCTACTTGCTC+TGG | 0.449930 | 1.2:-64281473 | None:intergenic |
| GGCTATTGTTCTTAACTTGG+AGG | 0.458375 | 1.2:+64279012 | MS.gene07400:CDS |
| TTCTTCTTCACAAGAGCCTG+TGG | 0.458654 | 1.2:-64278824 | None:intergenic |
| ATTAACTGCTCGGGTTCAAA+AGG | 0.469125 | 1.2:+64280982 | MS.gene07400:CDS |
| ATCATCTATGCTCGCAAGAA+GGG | 0.470075 | 1.2:+64282632 | MS.gene07400:CDS |
| TAACCTCAAGTAACATTTCG+AGG | 0.475004 | 1.2:-64281531 | None:intergenic |
| GGTAAGAGAGCAAGGGATCA+AGG | 0.476010 | 1.2:-64278964 | None:intergenic |
| ATCTCCTTGTTGTTGATGAA+TGG | 0.477259 | 1.2:-64280189 | None:intergenic |
| TCAAGGGTCTTTGCTTGATG+TGG | 0.489933 | 1.2:+64278889 | MS.gene07400:CDS |
| GATATCCTTGATCCTACGGT+TGG | 0.490907 | 1.2:-64281451 | None:intergenic |
| CAATTATATGTGTACCTTGG+AGG | 0.492032 | 1.2:-64280552 | None:intergenic |
| CTATATTTGTCTAGAAAGGC+AGG | 0.492215 | 1.2:+64281376 | MS.gene07400:CDS |
| CGTTGTCCCTGCTGACCCAC+AGG | 0.492292 | 1.2:+64278808 | MS.gene07400:CDS |
| GGTCATCATTCCAAGTATAT+GGG | 0.498665 | 1.2:-64282458 | None:intergenic |
| TGCTGCACGTACAACTGAGT+TGG | 0.500980 | 1.2:+64280496 | MS.gene07400:CDS |
| TGACCTATATTTGTCTAGAA+AGG | 0.503363 | 1.2:+64281372 | MS.gene07400:CDS |
| GGAGATGGTAAAGAATATCT+TGG | 0.503908 | 1.2:+64280206 | MS.gene07400:CDS |
| AGACACAGTCTTCTAGAAGC+TGG | 0.508453 | 1.2:+64278846 | MS.gene07400:CDS |
| TGCAGCAAGAAAACTACAAA+TGG | 0.509209 | 1.2:-64280480 | None:intergenic |
| GATGGCTGCTTATCCTGCAT+TGG | 0.513283 | 1.2:+64280520 | MS.gene07400:CDS |
| CAATGACAAGATTAACTGCT+CGG | 0.515956 | 1.2:+64280972 | MS.gene07400:CDS |
| CCTCCCCAACCGTAGGATCA+AGG | 0.516049 | 1.2:+64281446 | MS.gene07400:CDS |
| CCACCAGAGAGTAGAAAGCT+AGG | 0.520423 | 1.2:-64282413 | None:intergenic |
| TCCAGTGCACGGAACTCAAA+CGG | 0.523368 | 1.2:-64280443 | None:intergenic |
| CCTAGCTTTCTACTCTCTGG+TGG | 0.523685 | 1.2:+64282413 | MS.gene07400:CDS |
| TATCATCTATGCTCGCAAGA+AGG | 0.525225 | 1.2:+64282631 | MS.gene07400:CDS |
| TCTGGATATCCTTGATCCTA+CGG | 0.530102 | 1.2:-64281455 | None:intergenic |
| CCCATTTGAACATGTATCCA+TGG | 0.531150 | 1.2:-64282479 | None:intergenic |
| GCTCGCAAGAAGGGGTTGGT+TGG | 0.536841 | 1.2:+64282641 | MS.gene07400:CDS |
| CCATGGATACATGTTCAAAT+GGG | 0.538392 | 1.2:+64282479 | MS.gene07400:CDS |
| TACTATTCTCGGTCGTGAGA+AGG | 0.538547 | 1.2:+64278991 | MS.gene07400:CDS |
| TATCCTTGATCCTACGGTTG+GGG | 0.543604 | 1.2:-64281449 | None:intergenic |
| CAAGTATGCTATCATGCATA+GGG | 0.545650 | 1.2:+64278913 | MS.gene07400:CDS |
| GGGACCACATGTTCATCTGT+TGG | 0.547888 | 1.2:-64280125 | None:intergenic |
| ACAAGTATGCTATCATGCAT+AGG | 0.566351 | 1.2:+64278912 | MS.gene07400:CDS |
| GGTTCAGCATCACCAGTTAG+TGG | 0.568161 | 1.2:+64281397 | MS.gene07400:CDS |
| GAGGTAAGTTCATCCAATGC+AGG | 0.570665 | 1.2:-64280533 | None:intergenic |
| AATGACAAGATTAACTGCTC+GGG | 0.573623 | 1.2:+64280973 | MS.gene07400:CDS |
| CTATGCTCGCAAGAAGGGGT+TGG | 0.574758 | 1.2:+64282637 | MS.gene07400:CDS |
| CAAGAGCCTGTGGGTCAGCA+GGG | 0.575397 | 1.2:-64278814 | None:intergenic |
| TCTTCTTCACAAGAGCCTGT+GGG | 0.576092 | 1.2:-64278823 | None:intergenic |
| CCTTGATCCTACGGTTGGGG+AGG | 0.591814 | 1.2:-64281446 | None:intergenic |
| TCATCTATGCTCGCAAGAAG+GGG | 0.595509 | 1.2:+64282633 | MS.gene07400:CDS |
| AATGAAGCTGCTGAAGAAGA+TGG | 0.601906 | 1.2:+64280242 | MS.gene07400:CDS |
| GTAGAGGGGTAAGAGAGCAA+GGG | 0.605738 | 1.2:-64278971 | None:intergenic |
| TTTGCTGCCTCCCCAACCGT+AGG | 0.613377 | 1.2:+64281439 | MS.gene07400:CDS |
| CTCACGACCGAGAATAGTAG+AGG | 0.620244 | 1.2:-64278987 | None:intergenic |
| ACATGTGGTCCCTGTTGTTG+AGG | 0.627274 | 1.2:+64280136 | MS.gene07400:CDS |
| AGCTATTATCACAGCTGATG+AGG | 0.627305 | 1.2:+64279153 | MS.gene07400:CDS |
| AGACCTCGAAATGTTACTTG+AGG | 0.628661 | 1.2:+64281528 | MS.gene07400:CDS |
| TCACGACCGAGAATAGTAGA+GGG | 0.631153 | 1.2:-64278986 | None:intergenic |
| AGTAAGGGGATGGCACGAGA+TGG | 0.631791 | 1.2:+64278782 | None:intergenic |
| ATTCATCAACAACAAGGAGA+TGG | 0.641546 | 1.2:+64280191 | MS.gene07400:CDS |
| GTTTGAGTTCCGTGCACTGG+AGG | 0.642547 | 1.2:+64280445 | MS.gene07400:CDS |
| CTAAAGCTACCTCCAGTGCA+CGG | 0.645191 | 1.2:-64280454 | None:intergenic |
| ATTGGATGAACTTACCTCCA+AGG | 0.645665 | 1.2:+64280538 | MS.gene07400:CDS |
| TATACTTGGAATGATGACCA+TGG | 0.658386 | 1.2:+64282462 | MS.gene07400:CDS |
| ACGTACAACTGAGTTGGAGA+TGG | 0.669402 | 1.2:+64280502 | MS.gene07400:CDS |
| AGATCCAACAGATGAACATG+TGG | 0.683792 | 1.2:+64280121 | MS.gene07400:CDS |
| CCTGAATAAGCTGATTACGA+TGG | 0.688402 | 1.2:-64282236 | None:intergenic |
| CTGTTGTTGAGGAACTGCAG+AGG | 0.690542 | 1.2:+64280147 | MS.gene07400:CDS |
| TCTGCAGTTCCTCAACAACA+GGG | 0.709297 | 1.2:-64280145 | None:intergenic |
| CACGACCGAGAATAGTAGAG+GGG | 0.716186 | 1.2:-64278985 | None:intergenic |
| AGTGCCATTCATCAACAACA+AGG | 0.724594 | 1.2:+64280185 | MS.gene07400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTTAATTAACTTTAATA+AGG | + | chr1.2:64279556-64279575 | MS.gene07400:intron | 10.0% |
| !! | AATTAAAAATGAAATTATGT+AGG | - | chr1.2:64279900-64279919 | None:intergenic | 10.0% |
| !! | ATATAATCATAAAAAGAAAA+TGG | - | chr1.2:64281056-64281075 | None:intergenic | 10.0% |
| !! | AAAAACAAAATCATATGATA+TGG | - | chr1.2:64279047-64279066 | None:intergenic | 15.0% |
| !! | TAATTTAGATAATTCAGATA+CGG | - | chr1.2:64280408-64280427 | None:intergenic | 15.0% |
| !!! | AAATTTTAGTTTTTCGTATT+AGG | + | chr1.2:64281738-64281757 | MS.gene07400:intron | 15.0% |
| !!! | AATTTTAGTTTTTCGTATTA+GGG | + | chr1.2:64281739-64281758 | MS.gene07400:intron | 15.0% |
| !!! | ATTGTATTGTGTTTTTTTTA+AGG | + | chr1.2:64279076-64279095 | MS.gene07400:intron | 15.0% |
| !!! | GAACAATTTTAAAACTTTTA+AGG | - | chr1.2:64279314-64279333 | None:intergenic | 15.0% |
| !!! | TAAGTTTTTATTTAATGTGA+TGG | + | chr1.2:64279839-64279858 | MS.gene07400:intron | 15.0% |
| !!! | TCATTTTTAATTTAGTGAAA+TGG | + | chr1.2:64279908-64279927 | MS.gene07400:intron | 15.0% |
| !!! | TGCTTTAAAAATATTTAGAA+AGG | + | chr1.2:64281564-64281583 | MS.gene07400:intron | 15.0% |
| !! | AATTTAGATAATTCAGATAC+GGG | - | chr1.2:64280407-64280426 | None:intergenic | 20.0% |
| !! | ACTTAGTTAAAGTTATAATG+TGG | - | chr1.2:64280080-64280099 | None:intergenic | 20.0% |
| !! | AGATTCACAAATATACAAAA+CGG | - | chr1.2:64280001-64280020 | None:intergenic | 20.0% |
| !! | AGTTTCTTTCATTAAAAACA+TGG | - | chr1.2:64281595-64281614 | None:intergenic | 20.0% |
| !! | ATATTTGCTTTCTTATAATC+AGG | + | chr1.2:64281191-64281210 | MS.gene07400:intron | 20.0% |
| !! | TATTTACTGGTAATAACAAT+AGG | + | chr1.2:64282151-64282170 | MS.gene07400:intron | 20.0% |
| !! | TTATAACTTTAACTAAGTTG+TGG | + | chr1.2:64280082-64280101 | MS.gene07400:intron | 20.0% |
| !! | TTGAATGTTAATGTAATCTT+CGG | - | chr1.2:64282114-64282133 | None:intergenic | 20.0% |
| !!! | AAAAGAAAATGGTATTTTTC+CGG | - | chr1.2:64281045-64281064 | None:intergenic | 20.0% |
| !!! | AGCTTTAAATGAAAAGAAAA+AGG | - | chr1.2:64282071-64282090 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTCCAAGATATAA+AGG | - | chr1.2:64279521-64279540 | None:intergenic | 20.0% |
| ! | AACAAATAGAAACCATGTAA+GGG | - | chr1.2:64280787-64280806 | None:intergenic | 25.0% |
| ! | AAGATCTAGTGTTCTTAATT+TGG | + | chr1.2:64281965-64281984 | MS.gene07400:intron | 25.0% |
| ! | AATAAGAACTTCGTTAAAAG+TGG | + | chr1.2:64280664-64280683 | MS.gene07400:intron | 25.0% |
| ! | AATCTTATATGTATGCCATA+GGG | + | chr1.2:64281709-64281728 | MS.gene07400:intron | 25.0% |
| ! | AATTAGACCAATATGATATC+AGG | - | chr1.2:64282043-64282062 | None:intergenic | 25.0% |
| ! | ACATATTATAGTTAAGCATG+TGG | + | chr1.2:64282530-64282549 | MS.gene07400:intron | 25.0% |
| ! | AGTAAGAAATGATTACAAGA+AGG | + | chr1.2:64279773-64279792 | MS.gene07400:intron | 25.0% |
| ! | AGTCAAATATAGTATTGTCA+TGG | + | chr1.2:64279271-64279290 | MS.gene07400:intron | 25.0% |
| ! | ATATGATCATATTTACTTGC+AGG | + | chr1.2:64282562-64282581 | MS.gene07400:intron | 25.0% |
| ! | ATGCTACAATGAAGAAAAAT+AGG | + | chr1.2:64279415-64279434 | MS.gene07400:intron | 25.0% |
| ! | ATTCAATTATATGTGTACCT+TGG | - | chr1.2:64280558-64280577 | None:intergenic | 25.0% |
| ! | ATTTCAGTTAAAACTGATCT+AGG | - | chr1.2:64281250-64281269 | None:intergenic | 25.0% |
| ! | CTTAAGTAGGTTAAATTTCA+AGG | - | chr1.2:64281120-64281139 | None:intergenic | 25.0% |
| ! | GCTTACATTCTCAAAATAAA+AGG | + | chr1.2:64279612-64279631 | MS.gene07400:intron | 25.0% |
| ! | GTAAGAAATGATTACAAGAA+GGG | + | chr1.2:64279774-64279793 | MS.gene07400:intron | 25.0% |
| ! | TACATTCTCAAAATAAAAGG+TGG | + | chr1.2:64279615-64279634 | MS.gene07400:intron | 25.0% |
| ! | TGGTAATAACAATAGGTATT+TGG | + | chr1.2:64282158-64282177 | MS.gene07400:intron | 25.0% |
| !! | CATGCTTTAAATAAAAGCTT+TGG | - | chr1.2:64279398-64279417 | None:intergenic | 25.0% |
| !! | TCTAACAAGTTCTTTAGAAA+GGG | - | chr1.2:64280355-64280374 | None:intergenic | 25.0% |
| !! | TTCTAACAAGTTCTTTAGAA+AGG | - | chr1.2:64280356-64280375 | None:intergenic | 25.0% |
| !!! | TGTGTAAATTTGTTGATTGA+TGG | + | chr1.2:64279196-64279215 | MS.gene07400:intron | 25.0% |
| AACAGAAAATTCAGAGTTCA+AGG | - | chr1.2:64281995-64282014 | None:intergenic | 30.0% | |
| CAACAAATAGAAACCATGTA+AGG | - | chr1.2:64280788-64280807 | None:intergenic | 30.0% | |
| CTAAAATTTACAGTTCCCTA+TGG | - | chr1.2:64281727-64281746 | None:intergenic | 30.0% | |
| CTTACATGGTTTCTATTTGT+TGG | + | chr1.2:64280786-64280805 | MS.gene07400:intron | 30.0% | |
| CTTTAACTAAGTTGTGGTAT+AGG | + | chr1.2:64280088-64280107 | MS.gene07400:intron | 30.0% | |
| CTTTCCAAGATATAAAGGAT+AGG | - | chr1.2:64279516-64279535 | None:intergenic | 30.0% | |
| GAAAGCAAATATTTCGAGAA+TGG | - | chr1.2:64281183-64281202 | None:intergenic | 30.0% | |
| GAAATTTAACCTACTTAAGC+AGG | + | chr1.2:64281121-64281140 | MS.gene07400:intron | 30.0% | |
| GAATCTTATATGTATGCCAT+AGG | + | chr1.2:64281708-64281727 | MS.gene07400:intron | 30.0% | |
| GCATACATATAAGATTCACA+AGG | - | chr1.2:64281705-64281724 | None:intergenic | 30.0% | |
| GCTTATTTCATGCAAATTGA+TGG | + | chr1.2:64281644-64281663 | MS.gene07400:CDS | 30.0% | |
| GTACAAAATATCTGAACTGA+AGG | - | chr1.2:64280708-64280727 | None:intergenic | 30.0% | |
| TCTTGTATTTGTCATCATTG+AGG | + | chr1.2:64280736-64280755 | MS.gene07400:intron | 30.0% | |
| TGAAAACTGAAACACGATAA+AGG | - | chr1.2:64280581-64280600 | None:intergenic | 30.0% | |
| TGACCTATATTTGTCTAGAA+AGG | + | chr1.2:64281372-64281391 | MS.gene07400:CDS | 30.0% | |
| ! | AACAATAGGTATTTGGTGAA+GGG | + | chr1.2:64282165-64282184 | MS.gene07400:intron | 30.0% |
| ! | GTTAGCTTATTCTATATCTG+AGG | - | chr1.2:64280612-64280631 | None:intergenic | 30.0% |
| ! | TAACAATAGGTATTTGGTGA+AGG | + | chr1.2:64282164-64282183 | MS.gene07400:intron | 30.0% |
| !! | AATAAGGAACAAGCTGTTTT+TGG | + | chr1.2:64279572-64279591 | MS.gene07400:intron | 30.0% |
| !! | CAAAAAAAGTACTTCACATC+TGG | - | chr1.2:64281775-64281794 | None:intergenic | 30.0% |
| !! | GCTATAGAATACTTTAGAGT+TGG | + | chr1.2:64279946-64279965 | MS.gene07400:intron | 30.0% |
| !! | TCTTTAGAAAGGGCATTATA+TGG | - | chr1.2:64280345-64280364 | None:intergenic | 30.0% |
| !! | TGAGGTGTTAGTTCTAATTA+TGG | + | chr1.2:64280754-64280773 | MS.gene07400:intron | 30.0% |
| !!! | CAGATGTGAAGTACTTTTTT+TGG | + | chr1.2:64281773-64281792 | MS.gene07400:intron | 30.0% |
| !!! | TGTGTTTGTTCATTTTTTGC+AGG | + | chr1.2:64281622-64281641 | MS.gene07400:intron | 30.0% |
| !!! | TTTTTTGGTCTTAGATGAAG+TGG | + | chr1.2:64281788-64281807 | MS.gene07400:intron | 30.0% |
| AAGTAACAGATTCCTCAAGA+AGG | - | chr1.2:64280845-64280864 | None:intergenic | 35.0% | |
| AATGACAAGATTAACTGCTC+GGG | + | chr1.2:64280973-64280992 | MS.gene07400:CDS | 35.0% | |
| ACAAGTATGCTATCATGCAT+AGG | + | chr1.2:64278912-64278931 | MS.gene07400:CDS | 35.0% | |
| ACCATGGATACATGTTCAAA+TGG | + | chr1.2:64282478-64282497 | MS.gene07400:CDS | 35.0% | |
| ACTTATAGAAGAGACATGCA+CGG | - | chr1.2:64282282-64282301 | None:intergenic | 35.0% | |
| AGCTTATTCTATATCTGAGG+AGG | - | chr1.2:64280609-64280628 | None:intergenic | 35.0% | |
| ATAGCAGCCTGATATCATAT+TGG | + | chr1.2:64282033-64282052 | MS.gene07400:intron | 35.0% | |
| ATCGATAATCCTGCTTAAGT+AGG | - | chr1.2:64281133-64281152 | None:intergenic | 35.0% | |
| ATGAACAATTAGGCATTCCA+AGG | - | chr1.2:64280034-64280053 | None:intergenic | 35.0% | |
| ATGGAAAACAAATGTCTGAG+AGG | - | chr1.2:64280317-64280336 | None:intergenic | 35.0% | |
| ATTCATCAACAACAAGGAGA+TGG | + | chr1.2:64280191-64280210 | MS.gene07400:CDS | 35.0% | |
| CAAAGGATACAAACATTCGA+AGG | - | chr1.2:64282343-64282362 | None:intergenic | 35.0% | |
| CAAGTATGCTATCATGCATA+GGG | + | chr1.2:64278913-64278932 | MS.gene07400:CDS | 35.0% | |
| CAATGACAAGATTAACTGCT+CGG | + | chr1.2:64280972-64280991 | MS.gene07400:CDS | 35.0% | |
| CAATTATATGTGTACCTTGG+AGG | - | chr1.2:64280555-64280574 | None:intergenic | 35.0% | |
| CAGTTTACGACACATATACT+TGG | + | chr1.2:64279723-64279742 | MS.gene07400:intron | 35.0% | |
| CATGCTAGCGAATCAAAAAA+TGG | - | chr1.2:64279354-64279373 | None:intergenic | 35.0% | |
| CCATGGATACATGTTCAAAT+GGG | + | chr1.2:64282479-64282498 | MS.gene07400:CDS | 35.0% | |
| CTATATTTGTCTAGAAAGGC+AGG | + | chr1.2:64281376-64281395 | MS.gene07400:CDS | 35.0% | |
| CTGCCTTTCTAGACAAATAT+AGG | - | chr1.2:64281378-64281397 | None:intergenic | 35.0% | |
| GAAGGCTATTGTTCTTAACT+TGG | + | chr1.2:64279009-64279028 | MS.gene07400:CDS | 35.0% | |
| GCAGATTAGTAGTCGTAATT+TGG | + | chr1.2:64280925-64280944 | MS.gene07400:intron | 35.0% | |
| GCTTATTCTATATCTGAGGA+GGG | - | chr1.2:64280608-64280627 | None:intergenic | 35.0% | |
| GCTTCCTATCCTTTATATCT+TGG | + | chr1.2:64279509-64279528 | MS.gene07400:intron | 35.0% | |
| GGAGATGGTAAAGAATATCT+TGG | + | chr1.2:64280206-64280225 | MS.gene07400:CDS | 35.0% | |
| GGTCATCATTCCAAGTATAT+GGG | - | chr1.2:64282461-64282480 | None:intergenic | 35.0% | |
| GTAGCTAGCAGTTTATTTAC+TGG | + | chr1.2:64282138-64282157 | MS.gene07400:intron | 35.0% | |
| TAACACACTCCATATCACTA+AGG | - | chr1.2:64281903-64281922 | None:intergenic | 35.0% | |
| TAACCTCAAGTAACATTTCG+AGG | - | chr1.2:64281534-64281553 | None:intergenic | 35.0% | |
| TATACTTGGAATGATGACCA+TGG | + | chr1.2:64282462-64282481 | MS.gene07400:CDS | 35.0% | |
| TATATGTGTCGTAAACTGCA+TGG | - | chr1.2:64279721-64279740 | None:intergenic | 35.0% | |
| TGAAAAACAAGCCAACAAGT+AGG | - | chr1.2:64279807-64279826 | None:intergenic | 35.0% | |
| TGAACAATTAGGCATTCCAA+GGG | - | chr1.2:64280033-64280052 | None:intergenic | 35.0% | |
| TGCAGCAAGAAAACTACAAA+TGG | - | chr1.2:64280483-64280502 | None:intergenic | 35.0% | |
| TGGTCATCATTCCAAGTATA+TGG | - | chr1.2:64282462-64282481 | None:intergenic | 35.0% | |
| TTGGCTAACAAGTACCTTAA+GGG | - | chr1.2:64279379-64279398 | None:intergenic | 35.0% | |
| TTTGGCTAACAAGTACCTTA+AGG | - | chr1.2:64279380-64279399 | None:intergenic | 35.0% | |
| ! | ACAATAGGTATTTGGTGAAG+GGG | + | chr1.2:64282166-64282185 | MS.gene07400:intron | 35.0% |
| ! | CTTATACTGATTGAGCATTG+AGG | + | chr1.2:64279642-64279661 | MS.gene07400:intron | 35.0% |
| !! | ACTTTAGAGTTGGACTCAAT+AGG | + | chr1.2:64279956-64279975 | MS.gene07400:intron | 35.0% |
| !! | ATCTCCTTGTTGTTGATGAA+TGG | - | chr1.2:64280192-64280211 | None:intergenic | 35.0% |
| !! | CTATTTGTTGGCTCAAAATG+TGG | + | chr1.2:64280798-64280817 | MS.gene07400:intron | 35.0% |
| !! | TTGCAGGTAGTTATTTTCTC+AGG | + | chr1.2:64282578-64282597 | MS.gene07400:intron | 35.0% |
| AAAGCTAGGCCTTAGTGATA+TGG | + | chr1.2:64281891-64281910 | MS.gene07400:intron | 40.0% | |
| AAATCCAGCTCCTTCAAAAG+TGG | - | chr1.2:64279478-64279497 | None:intergenic | 40.0% | |
| AATACTTGCTCTACTTGCTC+TGG | - | chr1.2:64281476-64281495 | None:intergenic | 40.0% | |
| AATGAAGCTGCTGAAGAAGA+TGG | + | chr1.2:64280242-64280261 | MS.gene07400:CDS | 40.0% | |
| AGATCCAACAGATGAACATG+TGG | + | chr1.2:64280121-64280140 | MS.gene07400:CDS | 40.0% | |
| AGATGAGCTTGAACAATTGC+TGG | + | chr1.2:64281330-64281349 | MS.gene07400:CDS | 40.0% | |
| AGCTATTATCACAGCTGATG+AGG | + | chr1.2:64279153-64279172 | MS.gene07400:CDS | 40.0% | |
| AGGGACAATAACCTACTTGT+TGG | + | chr1.2:64279793-64279812 | MS.gene07400:intron | 40.0% | |
| ATATCCTTGATCCTACGGTT+GGG | - | chr1.2:64281453-64281472 | None:intergenic | 40.0% | |
| ATCATCTATGCTCGCAAGAA+GGG | + | chr1.2:64282632-64282651 | MS.gene07400:CDS | 40.0% | |
| ATGGTTGTCAAGCTGCAAAA+TGG | - | chr1.2:64282220-64282239 | None:intergenic | 40.0% | |
| ATTAACTGCTCGGGTTCAAA+AGG | + | chr1.2:64280982-64281001 | MS.gene07400:CDS | 40.0% | |
| ATTGGATGAACTTACCTCCA+AGG | + | chr1.2:64280538-64280557 | MS.gene07400:CDS | 40.0% | |
| CAGTTCTCGTTATCTGTTAC+AGG | + | chr1.2:64281303-64281322 | MS.gene07400:intron | 40.0% | |
| CCATCGTAATCAGCTTATTC+AGG | + | chr1.2:64282236-64282255 | MS.gene07400:CDS | 40.0% | |
| CCCATTTGAACATGTATCCA+TGG | - | chr1.2:64282482-64282501 | None:intergenic | 40.0% | |
| CCTGAATAAGCTGATTACGA+TGG | - | chr1.2:64282239-64282258 | None:intergenic | 40.0% | |
| CTCGGTCTCTATGAACAATT+AGG | - | chr1.2:64280044-64280063 | None:intergenic | 40.0% | |
| CTGTAACAGATAACGAGAAC+TGG | - | chr1.2:64281305-64281324 | None:intergenic | 40.0% | |
| GCATGAACATCCCATATACT+TGG | + | chr1.2:64282448-64282467 | MS.gene07400:CDS | 40.0% | |
| GCCAGTGAAAAATTTGTGAC+CGG | + | chr1.2:64281023-64281042 | MS.gene07400:intron | 40.0% | |
| TAGTCGTGTGAGTGAATTTC+AGG | - | chr1.2:64281823-64281842 | None:intergenic | 40.0% | |
| TATCATCTATGCTCGCAAGA+AGG | + | chr1.2:64282631-64282650 | MS.gene07400:CDS | 40.0% | |
| TATGGATGCTTTCCCTTACA+TGG | + | chr1.2:64280772-64280791 | MS.gene07400:intron | 40.0% | |
| TATTCTACACGTGTTGTGCT+TGG | + | chr1.2:64281073-64281092 | MS.gene07400:intron | 40.0% | |
| TCAGCATTACCAGTAAAGCT+AGG | + | chr1.2:64281877-64281896 | MS.gene07400:intron | 40.0% | |
| TCTGGATATCCTTGATCCTA+CGG | - | chr1.2:64281458-64281477 | None:intergenic | 40.0% | |
| TCTTACCCCTCTACTATTCT+CGG | + | chr1.2:64278980-64278999 | MS.gene07400:CDS | 40.0% | |
| TGAATCTCTGTTCAAACCCT+TGG | + | chr1.2:64280014-64280033 | MS.gene07400:intron | 40.0% | |
| TGATGAATGGCACTCAGTTT+AGG | - | chr1.2:64280179-64280198 | None:intergenic | 40.0% | |
| TGTGGAAGTAAAAGCGATCT+CGG | - | chr1.2:64280062-64280081 | None:intergenic | 40.0% | |
| TTCCATGTTTGACCTTCTTG+AGG | + | chr1.2:64280830-64280849 | MS.gene07400:intron | 40.0% | |
| TTCCTCAAGAAGGTCAAACA+TGG | - | chr1.2:64280835-64280854 | None:intergenic | 40.0% | |
| ! | AGACCTCGAAATGTTACTTG+AGG | + | chr1.2:64281528-64281547 | MS.gene07400:CDS | 40.0% |
| ! | AGGGCATTATATGGTGCAAA+TGG | - | chr1.2:64280336-64280355 | None:intergenic | 40.0% |
| ! | AGTGCCATTCATCAACAACA+AGG | + | chr1.2:64280185-64280204 | MS.gene07400:CDS | 40.0% |
| ! | CACAAATTTTTCACTGGCAC+AGG | - | chr1.2:64281021-64281040 | None:intergenic | 40.0% |
| ! | CTGGTAATGCTGATATTGCT+AGG | - | chr1.2:64281870-64281889 | None:intergenic | 40.0% |
| ! | GAGCTGGATTTGAAACACTA+TGG | + | chr1.2:64279487-64279506 | MS.gene07400:intron | 40.0% |
| ! | GGAGATGGTCATTGATCTTT+TGG | + | chr1.2:64281094-64281113 | MS.gene07400:intron | 40.0% |
| ! | GGCTATTGTTCTTAACTTGG+AGG | + | chr1.2:64279012-64279031 | MS.gene07400:CDS | 40.0% |
| ! | TCCGGTCACAAATTTTTCAC+TGG | - | chr1.2:64281027-64281046 | None:intergenic | 40.0% |
| !! | AGAAGCTGGATTGCTTTTGA+TGG | + | chr1.2:64278860-64278879 | MS.gene07400:CDS | 40.0% |
| !! | TGGATTGCTTTTGATGGTAC+TGG | + | chr1.2:64278866-64278885 | MS.gene07400:CDS | 40.0% |
| !!! | CTTTTGATGGTACTGGTCAA+GGG | + | chr1.2:64278873-64278892 | MS.gene07400:CDS | 40.0% |
| AGGTTTGAGCAGTAGAGGAA+TGG | + | chr1.2:64279662-64279681 | MS.gene07400:intron | 45.0% | |
| CACGGAAGCAGAAACATAGA+AGG | - | chr1.2:64282264-64282283 | None:intergenic | 45.0% | |
| CAGTAGAGGAATGGTAGATG+TGG | + | chr1.2:64279671-64279690 | MS.gene07400:intron | 45.0% | |
| CATTGAGGTTTGAGCAGTAG+AGG | + | chr1.2:64279657-64279676 | MS.gene07400:intron | 45.0% | |
| GAGGTAAGTTCATCCAATGC+AGG | - | chr1.2:64280536-64280555 | None:intergenic | 45.0% | |
| GATATCCTTGATCCTACGGT+TGG | - | chr1.2:64281454-64281473 | None:intergenic | 45.0% | |
| TACTATTCTCGGTCGTGAGA+AGG | + | chr1.2:64278991-64279010 | MS.gene07400:CDS | 45.0% | |
| TATCCTTGATCCTACGGTTG+GGG | - | chr1.2:64281452-64281471 | None:intergenic | 45.0% | |
| TCAAGGGTCTTTGCTTGATG+TGG | + | chr1.2:64278889-64278908 | MS.gene07400:CDS | 45.0% | |
| TCACAGCTGATGAGGTTAGT+CGG | + | chr1.2:64279161-64279180 | MS.gene07400:intron | 45.0% | |
| TCACGACCGAGAATAGTAGA+GGG | - | chr1.2:64278989-64279008 | None:intergenic | 45.0% | |
| TCATCTATGCTCGCAAGAAG+GGG | + | chr1.2:64282633-64282652 | MS.gene07400:CDS | 45.0% | |
| TCGTGTGAGTGAATTTCAGG+TGG | - | chr1.2:64281820-64281839 | None:intergenic | 45.0% | |
| TCTGCAGTTCCTCAACAACA+GGG | - | chr1.2:64280148-64280167 | None:intergenic | 45.0% | |
| TCTTCTTCACAAGAGCCTGT+GGG | - | chr1.2:64278826-64278845 | None:intergenic | 45.0% | |
| TTCGCTAGCATGTTCCCTTA+AGG | + | chr1.2:64279362-64279381 | MS.gene07400:intron | 45.0% | |
| TTCTTCTTCACAAGAGCCTG+TGG | - | chr1.2:64278827-64278846 | None:intergenic | 45.0% | |
| TTGGAGCTCTTTCTTAGCTC+TGG | + | chr1.2:64282381-64282400 | MS.gene07400:CDS | 45.0% | |
| ! | ACGTACAACTGAGTTGGAGA+TGG | + | chr1.2:64280502-64280521 | MS.gene07400:CDS | 45.0% |
| ! | AGACACAGTCTTCTAGAAGC+TGG | + | chr1.2:64278846-64278865 | MS.gene07400:CDS | 45.0% |
| ! | GCTGGATGATGACGATGATA+TGG | + | chr1.2:64281348-64281367 | MS.gene07400:CDS | 45.0% |
| ! | TCTCTGGTGGCTGGTATTTT+TGG | + | chr1.2:64282426-64282445 | MS.gene07400:CDS | 45.0% |
| ! | TTGCCTAGCTTTCTACTCTC+TGG | + | chr1.2:64282410-64282429 | MS.gene07400:CDS | 45.0% |
| !! | GTCACTGTCTCCACTTTTGA+AGG | + | chr1.2:64279465-64279484 | MS.gene07400:intron | 45.0% |
| !! | TCACTAAGGCCTAGCTTTAC+TGG | - | chr1.2:64281889-64281908 | None:intergenic | 45.0% |
| !! | TGCACGAGTGTTGAAGACAA+AGG | - | chr1.2:64282360-64282379 | None:intergenic | 45.0% |
| !!! | GCTTTTGATGGTACTGGTCA+AGG | + | chr1.2:64278872-64278891 | MS.gene07400:CDS | 45.0% |
| ACACGTGTTGTGCTTGGAGA+TGG | + | chr1.2:64281079-64281098 | MS.gene07400:intron | 50.0% | |
| ACATGTGGTCCCTGTTGTTG+AGG | + | chr1.2:64280136-64280155 | MS.gene07400:CDS | 50.0% | |
| AGTAGAGGGGTAAGAGAGCA+AGG | - | chr1.2:64278975-64278994 | None:intergenic | 50.0% | |
| CAAGGAGACGACACTTACTG+TGG | - | chr1.2:64281687-64281706 | None:intergenic | 50.0% | |
| CACGACCGAGAATAGTAGAG+GGG | - | chr1.2:64278988-64279007 | None:intergenic | 50.0% | |
| CCACCAGAGAGTAGAAAGCT+AGG | - | chr1.2:64282416-64282435 | None:intergenic | 50.0% | |
| CGACTACGAAACCAGAGTGA+AGG | + | chr1.2:64281837-64281856 | MS.gene07400:intron | 50.0% | |
| CTAAAGCTACCTCCAGTGCA+CGG | - | chr1.2:64280457-64280476 | None:intergenic | 50.0% | |
| CTCACGACCGAGAATAGTAG+AGG | - | chr1.2:64278990-64279009 | None:intergenic | 50.0% | |
| CTCTGCAGTTCCTCAACAAC+AGG | - | chr1.2:64280149-64280168 | None:intergenic | 50.0% | |
| CTGTTGTTGAGGAACTGCAG+AGG | + | chr1.2:64280147-64280166 | MS.gene07400:CDS | 50.0% | |
| GATGGCTGCTTATCCTGCAT+TGG | + | chr1.2:64280520-64280539 | MS.gene07400:CDS | 50.0% | |
| GCATGACCTGATCCACTAAC+TGG | - | chr1.2:64281412-64281431 | None:intergenic | 50.0% | |
| GGGACCACATGTTCATCTGT+TGG | - | chr1.2:64280128-64280147 | None:intergenic | 50.0% | |
| GGTAAGAGAGCAAGGGATCA+AGG | - | chr1.2:64278967-64278986 | None:intergenic | 50.0% | |
| GGTTCAGCATCACCAGTTAG+TGG | + | chr1.2:64281397-64281416 | MS.gene07400:CDS | 50.0% | |
| GTAGAGGGGTAAGAGAGCAA+GGG | - | chr1.2:64278974-64278993 | None:intergenic | 50.0% | |
| GTCTTCAACACTCGTGCAGT+TGG | + | chr1.2:64282362-64282381 | MS.gene07400:intron | 50.0% | |
| GTGGATCAGGTCATGCAAAC+TGG | + | chr1.2:64281416-64281435 | MS.gene07400:CDS | 50.0% | |
| TAGGCTAGACACCTTCACTC+TGG | - | chr1.2:64281851-64281870 | None:intergenic | 50.0% | |
| TCCAGTGCACGGAACTCAAA+CGG | - | chr1.2:64280446-64280465 | None:intergenic | 50.0% | |
| TGCTGCACGTACAACTGAGT+TGG | + | chr1.2:64280496-64280515 | MS.gene07400:CDS | 50.0% | |
| ! | CCTAGCTTTCTACTCTCTGG+TGG | + | chr1.2:64282413-64282432 | MS.gene07400:CDS | 50.0% |
| ! | GCATCACCAGTTAGTGGATC+AGG | + | chr1.2:64281403-64281422 | MS.gene07400:CDS | 50.0% |
| ! | TGGTGATGAGCGACGGATAA+AGG | - | chr1.2:64281285-64281304 | None:intergenic | 50.0% |
| !! | GTCTCCACTTTTGAAGGAGC+TGG | + | chr1.2:64279471-64279490 | MS.gene07400:intron | 50.0% |
| CTATGCTCGCAAGAAGGGGT+TGG | + | chr1.2:64282637-64282656 | MS.gene07400:CDS | 55.0% | |
| GCTTTCTACTCTCTGGTGGC+TGG | + | chr1.2:64282417-64282436 | MS.gene07400:CDS | 55.0% | |
| ! | ACCGTTTGAGTTCCGTGCAC+TGG | + | chr1.2:64280442-64280461 | MS.gene07400:CDS | 55.0% |
| ! | CGAGAACTGGTGATGAGCGA+CGG | - | chr1.2:64281292-64281311 | None:intergenic | 55.0% |
| ! | GTTTGAGTTCCGTGCACTGG+AGG | + | chr1.2:64280445-64280464 | MS.gene07400:CDS | 55.0% |
| ACAAGAGCCTGTGGGTCAGC+AGG | - | chr1.2:64278818-64278837 | None:intergenic | 60.0% | |
| CAAGAGCCTGTGGGTCAGCA+GGG | - | chr1.2:64278817-64278836 | None:intergenic | 60.0% | |
| CCTCCCCAACCGTAGGATCA+AGG | + | chr1.2:64281446-64281465 | MS.gene07400:CDS | 60.0% | |
| CCTTGATCCTACGGTTGGGG+AGG | - | chr1.2:64281449-64281468 | None:intergenic | 60.0% | |
| TTTGCTGCCTCCCCAACCGT+AGG | + | chr1.2:64281439-64281458 | MS.gene07400:CDS | 60.0% | |
| ! | GCTCGCAAGAAGGGGTTGGT+TGG | + | chr1.2:64282641-64282660 | MS.gene07400:CDS | 60.0% |
| CGTTGTCCCTGCTGACCCAC+AGG | + | chr1.2:64278808-64278827 | MS.gene07400:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 64278791 | 64282670 | 64278791 | ID=MS.gene07400 |
| chr1.2 | mRNA | 64278791 | 64282670 | 64278791 | ID=MS.gene07400.t1;Parent=MS.gene07400 |
| chr1.2 | exon | 64278791 | 64279033 | 64278791 | ID=MS.gene07400.t1.exon1;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64278791 | 64279033 | 64278791 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64279145 | 64279174 | 64279145 | ID=MS.gene07400.t1.exon2;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64279145 | 64279174 | 64279145 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64280110 | 64280263 | 64280110 | ID=MS.gene07400.t1.exon3;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64280110 | 64280263 | 64280110 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64280438 | 64280559 | 64280438 | ID=MS.gene07400.t1.exon4;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64280438 | 64280559 | 64280438 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64280929 | 64281003 | 64280929 | ID=MS.gene07400.t1.exon5;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64280929 | 64281003 | 64280929 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64281325 | 64281549 | 64281325 | ID=MS.gene07400.t1.exon6;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64281325 | 64281549 | 64281325 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64281644 | 64281688 | 64281644 | ID=MS.gene07400.t1.exon7;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64281644 | 64281688 | 64281644 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64282089 | 64282133 | 64282089 | ID=MS.gene07400.t1.exon8;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64282089 | 64282133 | 64282089 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64282228 | 64282257 | 64282228 | ID=MS.gene07400.t1.exon9;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64282228 | 64282257 | 64282228 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64282381 | 64282500 | 64282381 | ID=MS.gene07400.t1.exon10;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64282381 | 64282500 | 64282381 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| chr1.2 | exon | 64282584 | 64282670 | 64282584 | ID=MS.gene07400.t1.exon11;Parent=MS.gene07400.t1 |
| chr1.2 | CDS | 64282584 | 64282670 | 64282584 | ID=cds.MS.gene07400.t1;Parent=MS.gene07400.t1 |
| Gene Sequence |
| Protein sequence |
