AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058781


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 169 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGTAATTATGCATATTAT+TGG 0.179884 1.4:+64743153 MS.gene058781:CDS
CCCTCTCCTTCTTAGAATTA+AGG 0.206742 1.4:+64742086 MS.gene058781:CDS
GGATATCTCTGAAAATAAAA+AGG 0.209690 1.4:+64742969 MS.gene058781:CDS
TTTGCATAATTGTGCTGTTT+TGG 0.239471 1.4:+64742284 MS.gene058781:CDS
TGTGAATTTGAATAATCTTT+AGG 0.255453 1.4:-64744804 None:intergenic
TTCATCAGGGTTTGAGTGCC+TGG 0.258763 1.4:+64744926 MS.gene058781:CDS
GATGAAGGAGGATTGGTTTC+CGG 0.271626 1.4:-64745148 None:intergenic
GCTATGATCAAAGGCCAATT+AGG 0.272954 1.4:-64745059 None:intergenic
TGCACCAAACCCTGAGAGTT+TGG 0.309721 1.4:-64744720 None:intergenic
TTTATGTCTACATACTCAAC+TGG 0.311908 1.4:-64743285 None:intergenic
GGAAATTCAATGGCCCTAAT+TGG 0.315301 1.4:+64745045 MS.gene058781:CDS
GGATGCTTACTAGGGAAATT+AGG 0.316546 1.4:+64742199 MS.gene058781:CDS
ATGTTATGCTATACTAGTTT+TGG 0.328451 1.4:+64742582 MS.gene058781:CDS
GATTATTCAAATTCACAGTT+TGG 0.328563 1.4:+64744810 MS.gene058781:CDS
AGGAAGCTAGTTGGCATGTT+AGG 0.342538 1.4:+64742178 MS.gene058781:CDS
AGGACTGAACAAAAGATTAT+TGG 0.343143 1.4:+64742892 MS.gene058781:CDS
CAGATGATGATAGTTTAAAT+AGG 0.352906 1.4:+64744853 MS.gene058781:CDS
ACTTCAAAACCATCCATTTC+AGG 0.357064 1.4:-64745008 None:intergenic
ATCTGTTGTTTCGTTGAAAT+CGG 0.358826 1.4:-64743348 None:intergenic
TTCCTTATCTCCAACACATC+AGG 0.366420 1.4:-64742403 None:intergenic
TTCTTCCAGGTTCGGACTCT+AGG 0.375382 1.4:+64742605 MS.gene058781:CDS
CTAGTAACAGCAGTTTCATC+AGG 0.380902 1.4:+64744912 MS.gene058781:CDS
CAGGTTCGGACTCTAGGGTT+TGG 0.381488 1.4:+64742611 MS.gene058781:CDS
GGCATGTTAGGATGCTTACT+AGG 0.396870 1.4:+64742190 MS.gene058781:CDS
TGGAATTGGGGCAAGAAGTT+GGG 0.397658 1.4:+64742139 MS.gene058781:CDS
TCATGAATTGAAATCGGATT+CGG 0.398997 1.4:+64742342 MS.gene058781:CDS
TTTGACTCATGAATTGAAAT+CGG 0.399140 1.4:+64742336 MS.gene058781:CDS
GAATCACAACAGTGAATCTA+AGG 0.402957 1.4:+64743383 MS.gene058781:CDS
ATGGAATTGGGGCAAGAAGT+TGG 0.404627 1.4:+64742138 MS.gene058781:CDS
GTCCATGGCTCATCACTGTT+TGG 0.409431 1.4:-64742810 None:intergenic
CCCTCAACATGGAATGTAGA+AGG 0.409888 1.4:-64743020 None:intergenic
CATGAATTGAAATCGGATTC+GGG 0.409935 1.4:+64742343 MS.gene058781:CDS
AGATAATGCAAGGTAATATA+TGG 0.410537 1.4:+64744691 MS.gene058781:intron
AGGCAGAATGTGATGGAATT+GGG 0.410985 1.4:+64742126 MS.gene058781:CDS
AGTTGAGGTGGTGGCTGATC+AGG 0.412583 1.4:+64742654 MS.gene058781:CDS
GAGGCAGAATGTGATGGAAT+TGG 0.412904 1.4:+64742125 MS.gene058781:CDS
TTGAAGTGGCGGCAAGGATC+AGG 0.415267 1.4:+64745024 MS.gene058781:CDS
ATTACCAAACTCTCAGGGTT+TGG 0.429450 1.4:+64744716 MS.gene058781:CDS
ATGGATATTACCAAACTCTC+AGG 0.429769 1.4:+64744710 MS.gene058781:CDS
CCTTCTACATTCCATGTTGA+GGG 0.431332 1.4:+64743020 MS.gene058781:CDS
ATCTCTCTCCTATCATCATT+CGG 0.433427 1.4:-64742310 None:intergenic
ACCTCAACTATCTCCATCTC+TGG 0.436575 1.4:-64742640 None:intergenic
TTGTGTGTGTATCAAGGGTT+TGG 0.438334 1.4:+64743066 MS.gene058781:CDS
GCAACTCCTAGTTTAGATTC+AGG 0.441706 1.4:-64742451 None:intergenic
TTTGAGACTGTTGCAATGCT+CGG 0.446015 1.4:-64742750 None:intergenic
CAAACCCTAGAGTCCGAACC+TGG 0.447027 1.4:-64742610 None:intergenic
GAAAGCAAGAGTTGAAAAGA+AGG 0.447107 1.4:-64741994 None:intergenic
TAAGGAAAACTAAAGGGGTT+AGG 0.448583 1.4:+64742419 MS.gene058781:CDS
CTATGATCAAAGGCCAATTA+GGG 0.451338 1.4:-64745058 None:intergenic
CTGGGTGCTATAAGTGGCTC+TGG 0.456114 1.4:+64744945 MS.gene058781:CDS
CTTCTTCTAAAGTTTCAGAT+AGG 0.459490 1.4:+64744753 MS.gene058781:CDS
TACAAGTGAGGGTGGTGATA+AGG 0.459678 1.4:+64743227 MS.gene058781:CDS
GAACGCGATGATGGCCAGCC+AGG 0.462578 1.4:+64742774 MS.gene058781:CDS
TTTGGATGCCGAATGATGAT+AGG 0.468533 1.4:+64742302 MS.gene058781:CDS
TGGAGATAAGGAAAACTAAA+GGG 0.470604 1.4:+64742413 MS.gene058781:CDS
TAATGCAGAAGAGCAAGTTA+AGG 0.472874 1.4:+64745091 MS.gene058781:CDS
AGACATTCACATGCCTGAAA+TGG 0.474093 1.4:+64744995 MS.gene058781:CDS
TCCTTCTACATTCCATGTTG+AGG 0.474448 1.4:+64743019 MS.gene058781:CDS
GTTGCGAGTAGTGGCGGTGG+GGG 0.474504 1.4:+64742469 MS.gene058781:CDS
GGAGTTGCGAGTAGTGGCGG+TGG 0.474808 1.4:+64742466 MS.gene058781:CDS
CAAAGGAGGGACGCCGGAGT+TGG 0.475152 1.4:+64742552 MS.gene058781:CDS
CTTCATGTTTCGAATTTCAA+AGG 0.475335 1.4:+64742535 MS.gene058781:CDS
AAAGAAGCTACTCGAGAGGC+TGG 0.477400 1.4:+64744884 MS.gene058781:CDS
GAGTTGCGAGTAGTGGCGGT+GGG 0.478888 1.4:+64742467 MS.gene058781:CDS
CGAGAACCGACGCGTGAGAA+AGG 0.484376 1.4:-64742687 None:intergenic
ACCCTGATGTGTTGGAGATA+AGG 0.484829 1.4:+64742401 MS.gene058781:CDS
GAATGACTTCCTAGCCTGGC+TGG 0.485805 1.4:-64742788 None:intergenic
TCATCAGGGTTTGAGTGCCT+GGG 0.491049 1.4:+64744927 MS.gene058781:CDS
TCTTCCAGGTTCGGACTCTA+GGG 0.492992 1.4:+64742606 MS.gene058781:CDS
AAGTGCTTGTGTGTGTATCA+AGG 0.498129 1.4:+64743060 MS.gene058781:CDS
TGGGATTATGAAGAAACAAA+AGG 0.498382 1.4:+64742158 MS.gene058781:CDS
TTTGGAATGACTTCCTAGCC+TGG 0.501343 1.4:-64742792 None:intergenic
TTGGAGATAAGGAAAACTAA+AGG 0.504670 1.4:+64742412 MS.gene058781:CDS
TTGAGGCCTGAATCTAAACT+AGG 0.504811 1.4:+64742445 MS.gene058781:CDS
TGAGGAATTTAGCAACAGTA+AGG 0.504921 1.4:-64742017 None:intergenic
AGGCCAATGCATTCAGTTGT+GGG 0.505607 1.4:+64742838 MS.gene058781:CDS
CCCTCACCTTAATTCTAAGA+AGG 0.509242 1.4:-64742092 None:intergenic
CGATGATGGCCAGCCAGGCT+AGG 0.509807 1.4:+64742779 MS.gene058781:CDS
GAGTTTAGTAAACGATGTAA+TGG 0.515957 1.4:+64742948 MS.gene058781:CDS
AACTCTCAGGGTTTGGTGCA+AGG 0.516591 1.4:+64744723 MS.gene058781:CDS
GAGTGCCTGGGTGCTATAAG+TGG 0.519942 1.4:+64744939 MS.gene058781:CDS
GCATTGGCCTCCTCAGTCCA+TGG 0.520880 1.4:-64742825 None:intergenic
AAGGATAGATGCATGCTGGC+TGG 0.523016 1.4:+64745110 MS.gene058781:CDS
GTCTCAAAAGAACGCGATGA+TGG 0.526187 1.4:+64742765 MS.gene058781:CDS
TTTCTTGAGGCAGAATGTGA+TGG 0.526914 1.4:+64742119 MS.gene058781:CDS
GAGAACCGACGCGTGAGAAA+GGG 0.532015 1.4:-64742686 None:intergenic
TGTTGAACACGCGTGACCGA+GGG 0.532022 1.4:+64743181 MS.gene058781:CDS
GCTATCTGATGAAGGAGGAT+TGG 0.533500 1.4:-64745155 None:intergenic
TGTGATTGACCCTGATGTGT+TGG 0.534459 1.4:+64742393 MS.gene058781:CDS
TATGTGCCGGAGGTTGGTAC+AGG 0.536453 1.4:+64743422 MS.gene058781:CDS
GCAAGGATCAGGAAATTCAA+TGG 0.537123 1.4:+64745035 MS.gene058781:CDS
CTTCAATATGTGCCGGAGGT+TGG 0.538586 1.4:+64743416 MS.gene058781:CDS
GCTATAAGAGCTATGATCAA+AGG 0.539373 1.4:-64745068 None:intergenic
CAACGAAACAACAGATTGGT+AGG 0.539988 1.4:+64743355 MS.gene058781:CDS
GAGGCCAATGCATTCAGTTG+TGG 0.544582 1.4:+64742837 MS.gene058781:CDS
TTGTTGAACACGCGTGACCG+AGG 0.544947 1.4:+64743180 MS.gene058781:CDS
GGTTTGGACCGCTCCAGAGA+TGG 0.547219 1.4:+64742627 MS.gene058781:CDS
ATTTCAACGAAACAACAGAT+TGG 0.547312 1.4:+64743351 MS.gene058781:CDS
TGTTTCAAGAGGGTAATATG+AGG 0.554581 1.4:+64742872 MS.gene058781:CDS
AACATGTATCTTTCAAGCGA+TGG 0.555713 1.4:-64744777 None:intergenic
TGCATGCTGGCTGGAATGAA+TGG 0.556631 1.4:+64745119 MS.gene058781:CDS
GTTCATCCGCTATCTGATGA+AGG 0.557017 1.4:-64745163 None:intergenic
AGTGCTTGTGTGTGTATCAA+GGG 0.557402 1.4:+64743061 MS.gene058781:CDS
CTGGAATGAATGGTGTGATC+CGG 0.559043 1.4:+64745129 MS.gene058781:CDS
AGTTGCGAGTAGTGGCGGTG+GGG 0.561735 1.4:+64742468 MS.gene058781:CDS
ATGTTTCGAATTTCAAAGGA+GGG 0.563184 1.4:+64742539 MS.gene058781:CDS
GAATTTCAAAGGAGGGACGC+CGG 0.563898 1.4:+64742546 MS.gene058781:CDS
CACCTACCTGTACCAACCTC+CGG 0.564583 1.4:-64743428 None:intergenic
AACACATCAGGGTCAATCAC+AGG 0.564986 1.4:-64742391 None:intergenic
AACATGGAATGTAGAAGGAA+AGG 0.568366 1.4:-64743015 None:intergenic
CGTAGCCCTTTCTCACGCGT+CGG 0.568817 1.4:+64742681 MS.gene058781:CDS
AAATTCGAAACATGAAGCAT+CGG 0.568829 1.4:-64742529 None:intergenic
TATTCAAATTCACAGTTTGG+AGG 0.570060 1.4:+64744813 MS.gene058781:CDS
ATCCCCACAACTGAATGCAT+TGG 0.570182 1.4:-64742841 None:intergenic
CATGTTTCGAATTTCAAAGG+AGG 0.571827 1.4:+64742538 MS.gene058781:CDS
GCATGTTAGGATGCTTACTA+GGG 0.572208 1.4:+64742191 MS.gene058781:CDS
AGATCGGTCCTACTTCGTGC+AGG 0.573170 1.4:+64745188 MS.gene058781:CDS
TGCTCTTGTGTCGTGTGCAA+CGG 0.573831 1.4:+64742041 MS.gene058781:CDS
AGAAACAAAAGGAAGCTAGT+TGG 0.575842 1.4:+64742169 MS.gene058781:CDS
ACCTTAATTCTAAGAAGGAG+AGG 0.576433 1.4:-64742087 None:intergenic
ATTCACATGCCTGAAATGGA+TGG 0.579300 1.4:+64744999 MS.gene058781:CDS
TTCCAAACAGTGATGAGCCA+TGG 0.580133 1.4:+64742808 MS.gene058781:CDS
CCTTAATTCTAAGAAGGAGA+GGG 0.581303 1.4:-64742086 None:intergenic
TCCTTCTTAGAATTAAGGTG+AGG 0.582740 1.4:+64742091 MS.gene058781:CDS
CCTTCTTAGAATTAAGGTGA+GGG 0.583317 1.4:+64742092 MS.gene058781:CDS
GCTTGAGCTTCAATATGTGC+CGG 0.584592 1.4:+64743409 MS.gene058781:CDS
TCCTTATCTCCAACACATCA+GGG 0.586059 1.4:-64742402 None:intergenic
AACTATCTCCATCTCTGGAG+CGG 0.592322 1.4:-64742635 None:intergenic
TGAGGAGTTGGGTGCTGTCG+CGG 0.592472 1.4:+64742495 MS.gene058781:CDS
AGTTAAGGATAGATGCATGC+TGG 0.598062 1.4:+64745106 MS.gene058781:CDS
AAGGTTTCATCTCTAACTGA+AGG 0.599231 1.4:-64742996 None:intergenic
TGGATATTACCAAACTCTCA+GGG 0.599355 1.4:+64744711 MS.gene058781:CDS
GGAGATAAGGAAAACTAAAG+GGG 0.605752 1.4:+64742414 MS.gene058781:CDS
ATGCTTTCATTGTTTCAAGA+GGG 0.605913 1.4:+64742862 MS.gene058781:CDS
AAACTAGGAGTTGCGAGTAG+TGG 0.606504 1.4:+64742460 MS.gene058781:CDS
CTAGGAGTTGCGAGTAGTGG+CGG 0.609987 1.4:+64742463 MS.gene058781:CDS
AAGAAGCTACTCGAGAGGCT+GGG 0.610653 1.4:+64744885 MS.gene058781:CDS
GGTGCTATAAGTGGCTCTGG+TGG 0.610827 1.4:+64744948 MS.gene058781:CDS
TAGTAACAGCAGTTTCATCA+GGG 0.611000 1.4:+64744913 MS.gene058781:CDS
AATCTTATGCAGATAATGCA+AGG 0.616623 1.4:+64744681 MS.gene058781:intron
GAGGAATTTAGCAACAGTAA+GGG 0.621503 1.4:-64742016 None:intergenic
GATGCTTTCATTGTTTCAAG+AGG 0.621734 1.4:+64742861 MS.gene058781:CDS
GATGGAGATAGTTGAGGTGG+TGG 0.622877 1.4:+64742645 MS.gene058781:CDS
TCACAACAGTGAATCTAAGG+AGG 0.625084 1.4:+64743386 MS.gene058781:CDS
GATAGCGGATGAACTTAGAT+CGG 0.629033 1.4:+64745172 MS.gene058781:CDS
GCAAGCGGCTTCCCTCAACA+TGG 0.629945 1.4:-64743031 None:intergenic
CAAGCACTTAGCAATGCAAG+CGG 0.631343 1.4:-64743046 None:intergenic
GGTGACACAATGTTGAAAGT+CGG 0.632956 1.4:+64742913 MS.gene058781:CDS
CTAAGAAGGAGAGGGATCAA+CGG 0.639905 1.4:-64742078 None:intergenic
TAACATGTATCAACCAACTC+CGG 0.640709 1.4:-64742565 None:intergenic
CACAACAGTGAATCTAAGGA+GGG 0.640846 1.4:+64743387 MS.gene058781:CDS
TCCAGAGATGGAGATAGTTG+AGG 0.641469 1.4:+64742639 MS.gene058781:CDS
GGCCAATGCATTCAGTTGTG+GGG 0.642247 1.4:+64742839 MS.gene058781:CDS
TGAGCTTCAATATGTGCCGG+AGG 0.643404 1.4:+64743412 MS.gene058781:CDS
AGAGATGGAGATAGTTGAGG+TGG 0.648766 1.4:+64742642 MS.gene058781:CDS
GGCAGAATGTGATGGAATTG+GGG 0.651385 1.4:+64742127 MS.gene058781:CDS
TTATGTCTACATACTCAACT+GGG 0.652246 1.4:-64743284 None:intergenic
CAGTGATGAGCCATGGACTG+AGG 0.655532 1.4:+64742815 MS.gene058781:CDS
TGAGGTGGTGGCTGATCAGG+TGG 0.658305 1.4:+64742657 MS.gene058781:CDS
CGAAACAACAGATTGGTAGG+AGG 0.659295 1.4:+64743358 MS.gene058781:CDS
CATCTGCTAGCAAAATCTTG+AGG 0.670396 1.4:-64744836 None:intergenic
TGATGAGCCATGGACTGAGG+AGG 0.672113 1.4:+64742818 MS.gene058781:CDS
CAGAGCCACTTATAGCACCC+AGG 0.678501 1.4:-64744944 None:intergenic
CATCCGCTATCTGATGAAGG+AGG 0.680590 1.4:-64745160 None:intergenic
CGACGCGTGAGAAAGGGCTA+CGG 0.681594 1.4:-64742680 None:intergenic
AATCCTCCTTCATCAGATAG+CGG 0.688493 1.4:+64745157 MS.gene058781:CDS
TGACAAAGAAGCTACTCGAG+AGG 0.707649 1.4:+64744880 MS.gene058781:CDS
AGAAGGAGAGGGATCAACGG+CGG 0.710786 1.4:-64742075 None:intergenic
CACACGACACAAGAGCAGTG+AGG 0.767368 1.4:-64742035 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAATAATTACACA+GGG - chr1.4:64744616-64744635 None:intergenic 10.0%
!! TGTAATTATTTAATTAATCA+TGG + chr1.4:64744618-64744637 MS.gene058781:intron 10.0%
!! ATTATAAGTATAAAGAAGTA+AGG - chr1.4:64744481-64744500 None:intergenic 15.0%
!! GATTAATTAAATAATTACAC+AGG - chr1.4:64744617-64744636 None:intergenic 15.0%
!! TAGTGCTTTAATAAAATAAT+TGG - chr1.4:64744509-64744528 None:intergenic 15.0%
!! CAAGTAATTATGCATATTAT+TGG + chr1.4:64743153-64743172 MS.gene058781:CDS 20.0%
!! TGTGAATTTGAATAATCTTT+AGG - chr1.4:64744807-64744826 None:intergenic 20.0%
!! TTTCTTATGTTGAAAGATTT+AGG - chr1.4:64744000-64744019 None:intergenic 20.0%
!!! AAATTTGATTTTCAGATTAC+TGG + chr1.4:64743306-64743325 MS.gene058781:CDS 20.0%
!!! AATTTTACATCCTTAATGAA+TGG - chr1.4:64743668-64743687 None:intergenic 20.0%
!!! CTTTTATCTTAATAGTATCA+CGG + chr1.4:64744056-64744075 MS.gene058781:intron 20.0%
!!! GATATCTCTGAAAATAAAAA+GGG + chr1.4:64742970-64742989 MS.gene058781:CDS 20.0%
!!! TAATTTTGTTTTCCTCTTTT+AGG + chr1.4:64744146-64744165 MS.gene058781:intron 20.0%
! AATGCTTAAAGAATGATGTT+TGG + chr1.4:64743543-64743562 MS.gene058781:intron 25.0%
! AGATAATGCAAGGTAATATA+TGG + chr1.4:64744691-64744710 MS.gene058781:intron 25.0%
! ATGACAAAAAAATTGGTGTA+TGG + chr1.4:64743250-64743269 MS.gene058781:CDS 25.0%
! CACTGTCTATATTATATATG+TGG + chr1.4:64743454-64743473 MS.gene058781:intron 25.0%
! CAGATGATGATAGTTTAAAT+AGG + chr1.4:64744853-64744872 MS.gene058781:CDS 25.0%
! CGTGATACTATTAAGATAAA+AGG - chr1.4:64744058-64744077 None:intergenic 25.0%
! GATAAGGATGACAAAAAAAT+TGG + chr1.4:64743243-64743262 MS.gene058781:CDS 25.0%
! GATTATTCAAATTCACAGTT+TGG + chr1.4:64744810-64744829 MS.gene058781:CDS 25.0%
! TTTCTTCAAACCATTCATTA+AGG + chr1.4:64743655-64743674 MS.gene058781:intron 25.0%
! TTTGACTCATGAATTGAAAT+CGG + chr1.4:64742336-64742355 MS.gene058781:CDS 25.0%
!! AAAGATTTAGGTTATAACAG+AGG - chr1.4:64743988-64744007 None:intergenic 25.0%
!! GGATATCTCTGAAAATAAAA+AGG + chr1.4:64742969-64742988 MS.gene058781:CDS 25.0%
!! TTCTGACTTTATTTACATTG+TGG + chr1.4:64744658-64744677 MS.gene058781:intron 25.0%
!!! ATGTTATGCTATACTAGTTT+TGG + chr1.4:64742582-64742601 MS.gene058781:CDS 25.0%
!!! TTTTGTAGTCTTGTTCATAT+TGG - chr1.4:64744313-64744332 None:intergenic 25.0%
AAATTCGAAACATGAAGCAT+CGG - chr1.4:64742532-64742551 None:intergenic 30.0%
AATCTTATGCAGATAATGCA+AGG + chr1.4:64744681-64744700 MS.gene058781:intron 30.0%
ACCTATTTCCATTGATGAAA+AGG - chr1.4:64744346-64744365 None:intergenic 30.0%
AGACATAACATAGACAATCA+AGG - chr1.4:64743490-64743509 None:intergenic 30.0%
AGGACTGAACAAAAGATTAT+TGG + chr1.4:64742892-64742911 MS.gene058781:CDS 30.0%
ATGCTTTCATTGTTTCAAGA+GGG + chr1.4:64742862-64742881 MS.gene058781:CDS 30.0%
ATGTTTCGAATTTCAAAGGA+GGG + chr1.4:64742539-64742558 MS.gene058781:CDS 30.0%
ATTTCAACGAAACAACAGAT+TGG + chr1.4:64743351-64743370 MS.gene058781:CDS 30.0%
CTTCATGTTTCGAATTTCAA+AGG + chr1.4:64742535-64742554 MS.gene058781:CDS 30.0%
GAGTTTAGTAAACGATGTAA+TGG + chr1.4:64742948-64742967 MS.gene058781:CDS 30.0%
TATTCAAATTCACAGTTTGG+AGG + chr1.4:64744813-64744832 MS.gene058781:CDS 30.0%
TCATGAATTGAAATCGGATT+CGG + chr1.4:64742342-64742361 MS.gene058781:CDS 30.0%
TGGAGATAAGGAAAACTAAA+GGG + chr1.4:64742413-64742432 MS.gene058781:CDS 30.0%
TGGGATTATGAAGAAACAAA+AGG + chr1.4:64742158-64742177 MS.gene058781:CDS 30.0%
TTATGTCTACATACTCAACT+GGG - chr1.4:64743287-64743306 None:intergenic 30.0%
TTGGAGATAAGGAAAACTAA+AGG + chr1.4:64742412-64742431 MS.gene058781:CDS 30.0%
TTGTGTGATGTAAACTCAAA+AGG - chr1.4:64744113-64744132 None:intergenic 30.0%
TTTATGTCTACATACTCAAC+TGG - chr1.4:64743288-64743307 None:intergenic 30.0%
! AAGAAACTGATTCTACGAAT+CGG + chr1.4:64743826-64743845 MS.gene058781:intron 30.0%
! ATAAGAAAGCTTGTGCTTTT+TGG + chr1.4:64744371-64744390 MS.gene058781:intron 30.0%
! ATCTCTGAAAATAAAAAGGG+TGG + chr1.4:64742973-64742992 MS.gene058781:CDS 30.0%
! ATCTTTTGTGCCTTAAAATC+TGG + chr1.4:64744445-64744464 MS.gene058781:intron 30.0%
! GAATAACAAGTTCTGATTTG+TGG - chr1.4:64744554-64744573 None:intergenic 30.0%
! GTGTCTTTTCTTGAATTGTA+AGG + chr1.4:64744265-64744284 MS.gene058781:intron 30.0%
! TCCTACTTTACCAGATTTTA+AGG - chr1.4:64744458-64744477 None:intergenic 30.0%
! TCCTTTTCATCAATGGAAAT+AGG + chr1.4:64744342-64744361 MS.gene058781:intron 30.0%
! TCTTTGCCTGAAAAAGTTTT+AGG + chr1.4:64743111-64743130 MS.gene058781:CDS 30.0%
!! ATCTGTTGTTTCGTTGAAAT+CGG - chr1.4:64743351-64743370 None:intergenic 30.0%
!! CTTCTTCTAAAGTTTCAGAT+AGG + chr1.4:64744753-64744772 MS.gene058781:CDS 30.0%
!! TAAGAAAGCTTGTGCTTTTT+GGG + chr1.4:64744372-64744391 MS.gene058781:intron 30.0%
!!! TTTGCATAATTGTGCTGTTT+TGG + chr1.4:64742284-64742303 MS.gene058781:CDS 30.0%
AAAAAAGAGTCTCGACACAA+CGG - chr1.4:64743888-64743907 None:intergenic 35.0%
AACATGGAATGTAGAAGGAA+AGG - chr1.4:64743018-64743037 None:intergenic 35.0%
AACATGTATCTTTCAAGCGA+TGG - chr1.4:64744780-64744799 None:intergenic 35.0%
AAGGTTTCATCTCTAACTGA+AGG - chr1.4:64742999-64743018 None:intergenic 35.0%
AATCAGTTTCTTGCAATTGC+AGG - chr1.4:64743818-64743837 None:intergenic 35.0%
ACTTCAAAACCATCCATTTC+AGG - chr1.4:64745011-64745030 None:intergenic 35.0%
AGAAACAAAAGGAAGCTAGT+TGG + chr1.4:64742169-64742188 MS.gene058781:CDS 35.0%
ATCAGTTTCTTGCAATTGCA+GGG - chr1.4:64743817-64743836 None:intergenic 35.0%
ATCTCTCTCCTATCATCATT+CGG - chr1.4:64742313-64742332 None:intergenic 35.0%
ATGGATATTACCAAACTCTC+AGG + chr1.4:64744710-64744729 MS.gene058781:CDS 35.0%
CATGAATTGAAATCGGATTC+GGG + chr1.4:64742343-64742362 MS.gene058781:CDS 35.0%
CATGTTTCGAATTTCAAAGG+AGG + chr1.4:64742538-64742557 MS.gene058781:CDS 35.0%
CCTTCTTAGAATTAAGGTGA+GGG + chr1.4:64742092-64742111 MS.gene058781:CDS 35.0%
CTATGATCAAAGGCCAATTA+GGG - chr1.4:64745061-64745080 None:intergenic 35.0%
GAAAGCAAGAGTTGAAAAGA+AGG - chr1.4:64741997-64742016 None:intergenic 35.0%
GAATCACAACAGTGAATCTA+AGG + chr1.4:64743383-64743402 MS.gene058781:CDS 35.0%
GAGGAATTTAGCAACAGTAA+GGG - chr1.4:64742019-64742038 None:intergenic 35.0%
GATGCTTTCATTGTTTCAAG+AGG + chr1.4:64742861-64742880 MS.gene058781:CDS 35.0%
GCAATAACTGATCTCATATG+AGG + chr1.4:64743744-64743763 MS.gene058781:intron 35.0%
GCCTTAAAATCTGGTAAAGT+AGG + chr1.4:64744454-64744473 MS.gene058781:intron 35.0%
GCTATAAGAGCTATGATCAA+AGG - chr1.4:64745071-64745090 None:intergenic 35.0%
GCTCTTAGCTGAAATTAGTA+TGG - chr1.4:64743955-64743974 None:intergenic 35.0%
GGAGATAAGGAAAACTAAAG+GGG + chr1.4:64742414-64742433 MS.gene058781:CDS 35.0%
TAACATGTATCAACCAACTC+CGG - chr1.4:64742568-64742587 None:intergenic 35.0%
TAAGGAAAACTAAAGGGGTT+AGG + chr1.4:64742419-64742438 MS.gene058781:CDS 35.0%
TAATGCAGAAGAGCAAGTTA+AGG + chr1.4:64745091-64745110 MS.gene058781:CDS 35.0%
TACTCTTGTTGAGCTTTCTA+AGG + chr1.4:64742254-64742273 MS.gene058781:intron 35.0%
TAGTAACAGCAGTTTCATCA+GGG + chr1.4:64744913-64744932 MS.gene058781:CDS 35.0%
TCCTTCTTAGAATTAAGGTG+AGG + chr1.4:64742091-64742110 MS.gene058781:CDS 35.0%
TGAGGAATTTAGCAACAGTA+AGG - chr1.4:64742020-64742039 None:intergenic 35.0%
TGGATATTACCAAACTCTCA+GGG + chr1.4:64744711-64744730 MS.gene058781:CDS 35.0%
TGTTTCAAGAGGGTAATATG+AGG + chr1.4:64742872-64742891 MS.gene058781:CDS 35.0%
! ACCTTAATTCTAAGAAGGAG+AGG - chr1.4:64742090-64742109 None:intergenic 35.0%
! CCTTAATTCTAAGAAGGAGA+GGG - chr1.4:64742089-64742108 None:intergenic 35.0%
! GATTTAGGTTATAACAGAGG+AGG - chr1.4:64743985-64744004 None:intergenic 35.0%
! TCTCACTTCCTTTTCATCAA+TGG + chr1.4:64744335-64744354 MS.gene058781:intron 35.0%
!! AAGAAAGCTTGTGCTTTTTG+GGG + chr1.4:64744373-64744392 MS.gene058781:intron 35.0%
!! TCATCGCCTAAAACTTTTTC+AGG - chr1.4:64743120-64743139 None:intergenic 35.0%
!!! ATACTAGTTTTGGTTCTTCC+AGG + chr1.4:64742592-64742611 MS.gene058781:CDS 35.0%
!!! TGAAATGGATGGTTTTGAAG+TGG + chr1.4:64745010-64745029 MS.gene058781:CDS 35.0%
AAAAGGATCCTTCCAACATG+GGG - chr1.4:64744096-64744115 None:intergenic 40.0%
AAAGCAGATTCTGACATGAC+AGG + chr1.4:64744190-64744209 MS.gene058781:intron 40.0%
AAGTGCTTGTGTGTGTATCA+AGG + chr1.4:64743060-64743079 MS.gene058781:CDS 40.0%
AATCCTCCTTCATCAGATAG+CGG + chr1.4:64745157-64745176 MS.gene058781:CDS 40.0%
ACACAGAAACTGCATGATTG+TGG + chr1.4:64744243-64744262 MS.gene058781:intron 40.0%
ACCAATAACTGATCTGTTGC+AGG + chr1.4:64743783-64743802 MS.gene058781:intron 40.0%
AGACATTCACATGCCTGAAA+TGG + chr1.4:64744995-64745014 MS.gene058781:CDS 40.0%
AGTGCTTGTGTGTGTATCAA+GGG + chr1.4:64743061-64743080 MS.gene058781:CDS 40.0%
AGTTAAGGATAGATGCATGC+TGG + chr1.4:64745106-64745125 MS.gene058781:CDS 40.0%
ATTACCAAACTCTCAGGGTT+TGG + chr1.4:64744716-64744735 MS.gene058781:CDS 40.0%
ATTCACATGCCTGAAATGGA+TGG + chr1.4:64744999-64745018 MS.gene058781:CDS 40.0%
CAAAAGGATCCTTCCAACAT+GGG - chr1.4:64744097-64744116 None:intergenic 40.0%
CAACGAAACAACAGATTGGT+AGG + chr1.4:64743355-64743374 MS.gene058781:CDS 40.0%
CACAACAGTGAATCTAAGGA+GGG + chr1.4:64743387-64743406 MS.gene058781:CDS 40.0%
CATCTGCTAGCAAAATCTTG+AGG - chr1.4:64744839-64744858 None:intergenic 40.0%
CCCTCTCCTTCTTAGAATTA+AGG + chr1.4:64742086-64742105 MS.gene058781:CDS 40.0%
CCTTCTACATTCCATGTTGA+GGG + chr1.4:64743020-64743039 MS.gene058781:CDS 40.0%
CTAGTAACAGCAGTTTCATC+AGG + chr1.4:64744912-64744931 MS.gene058781:CDS 40.0%
GCAACAGATCAGTTATTGGT+CGG - chr1.4:64743783-64743802 None:intergenic 40.0%
GCAACTCCTAGTTTAGATTC+AGG - chr1.4:64742454-64742473 None:intergenic 40.0%
GCAAGGATCAGGAAATTCAA+TGG + chr1.4:64745035-64745054 MS.gene058781:CDS 40.0%
GCATGTTAGGATGCTTACTA+GGG + chr1.4:64742191-64742210 MS.gene058781:CDS 40.0%
GCTATGATCAAAGGCCAATT+AGG - chr1.4:64745062-64745081 None:intergenic 40.0%
GGAAATTCAATGGCCCTAAT+TGG + chr1.4:64745045-64745064 MS.gene058781:CDS 40.0%
GGATGCTTACTAGGGAAATT+AGG + chr1.4:64742199-64742218 MS.gene058781:CDS 40.0%
GGCATCATTAGAGAAACATG+AGG + chr1.4:64744211-64744230 MS.gene058781:intron 40.0%
GGTGACACAATGTTGAAAGT+CGG + chr1.4:64742913-64742932 MS.gene058781:CDS 40.0%
GTTGACCTGCATCTTCATTT+GGG + chr1.4:64743581-64743600 MS.gene058781:intron 40.0%
TCAAAAGGATCCTTCCAACA+TGG - chr1.4:64744098-64744117 None:intergenic 40.0%
TCACAACAGTGAATCTAAGG+AGG + chr1.4:64743386-64743405 MS.gene058781:CDS 40.0%
TCCTTATCTCCAACACATCA+GGG - chr1.4:64742405-64742424 None:intergenic 40.0%
TCCTTCTACATTCCATGTTG+AGG + chr1.4:64743019-64743038 MS.gene058781:CDS 40.0%
TGTTGACCTGCATCTTCATT+TGG + chr1.4:64743580-64743599 MS.gene058781:intron 40.0%
TTCCTTATCTCCAACACATC+AGG - chr1.4:64742406-64742425 None:intergenic 40.0%
TTGAGGCCTGAATCTAAACT+AGG + chr1.4:64742445-64742464 MS.gene058781:CDS 40.0%
TTGATCCCAAATGAAGATGC+AGG - chr1.4:64743589-64743608 None:intergenic 40.0%
TTGTGTGTGTATCAAGGGTT+TGG + chr1.4:64743066-64743085 MS.gene058781:CDS 40.0%
TTTCTTGAGGCAGAATGTGA+TGG + chr1.4:64742119-64742138 MS.gene058781:CDS 40.0%
TTTGGATGCCGAATGATGAT+AGG + chr1.4:64742302-64742321 MS.gene058781:CDS 40.0%
! AGGCAGAATGTGATGGAATT+GGG + chr1.4:64742126-64742145 MS.gene058781:CDS 40.0%
! CCCTCACCTTAATTCTAAGA+AGG - chr1.4:64742095-64742114 None:intergenic 40.0%
! CGGGTTTTTGTTACAAGTGA+GGG + chr1.4:64743216-64743235 MS.gene058781:CDS 40.0%
! CTAAAGGGGTTAGGATTTTG+AGG + chr1.4:64742428-64742447 MS.gene058781:CDS 40.0%
! GTTTTTGTTACAAGTGAGGG+TGG + chr1.4:64743219-64743238 MS.gene058781:CDS 40.0%
! TATTTTTCCCCCATGTTGGA+AGG + chr1.4:64744085-64744104 MS.gene058781:intron 40.0%
! TCGGGTTTTTGTTACAAGTG+AGG + chr1.4:64743215-64743234 MS.gene058781:CDS 40.0%
! TTTGAGACTGTTGCAATGCT+CGG - chr1.4:64742753-64742772 None:intergenic 40.0%
!! CTTGTTATTCCCTTGCCTAT+TGG + chr1.4:64744564-64744583 MS.gene058781:intron 40.0%
!! GATAGCGGATGAACTTAGAT+CGG + chr1.4:64745172-64745191 MS.gene058781:CDS 40.0%
!! TGTTGAGCTTTCTAAGGCTT+TGG + chr1.4:64742260-64742279 MS.gene058781:intron 40.0%
!!! AAGCTATTTTTCCCCCATGT+TGG + chr1.4:64744081-64744100 MS.gene058781:intron 40.0%
!!! AAGTTTTAGGCGATGAAGCA+AGG + chr1.4:64743124-64743143 MS.gene058781:CDS 40.0%
!!! AATGGATGGTTTTGAAGTGG+CGG + chr1.4:64745013-64745032 MS.gene058781:CDS 40.0%
!!! ACCGAGGGAATCTTGTTTTT+CGG + chr1.4:64743196-64743215 MS.gene058781:CDS 40.0%
!!! AGTTTTGGTTCTTCCAGGTT+CGG + chr1.4:64742597-64742616 MS.gene058781:CDS 40.0%
AAACTAGGAGTTGCGAGTAG+TGG + chr1.4:64742460-64742479 MS.gene058781:CDS 45.0%
AAAGGATCCTTCCAACATGG+GGG - chr1.4:64744095-64744114 None:intergenic 45.0%
AACACATCAGGGTCAATCAC+AGG - chr1.4:64742394-64742413 None:intergenic 45.0%
ACCCTGATGTGTTGGAGATA+AGG + chr1.4:64742401-64742420 MS.gene058781:CDS 45.0%
ACCTCAACTATCTCCATCTC+TGG - chr1.4:64742643-64742662 None:intergenic 45.0%
AGAGATGGAGATAGTTGAGG+TGG + chr1.4:64742642-64742661 MS.gene058781:CDS 45.0%
AGGAAGCTAGTTGGCATGTT+AGG + chr1.4:64742178-64742197 MS.gene058781:CDS 45.0%
AGGCCAATGCATTCAGTTGT+GGG + chr1.4:64742838-64742857 MS.gene058781:CDS 45.0%
ATCCCCACAACTGAATGCAT+TGG - chr1.4:64742844-64742863 None:intergenic 45.0%
ATGGAATTGGGGCAAGAAGT+TGG + chr1.4:64742138-64742157 MS.gene058781:CDS 45.0%
CAAGCACTTAGCAATGCAAG+CGG - chr1.4:64743049-64743068 None:intergenic 45.0%
CCAGGATATGCTCCTAAAAG+AGG - chr1.4:64744161-64744180 None:intergenic 45.0%
CCCGAAAAACAAGATTCCCT+CGG - chr1.4:64743200-64743219 None:intergenic 45.0%
CCCTCAACATGGAATGTAGA+AGG - chr1.4:64743023-64743042 None:intergenic 45.0%
CGAAACAACAGATTGGTAGG+AGG + chr1.4:64743358-64743377 MS.gene058781:CDS 45.0%
CTAAGAAGGAGAGGGATCAA+CGG - chr1.4:64742081-64742100 None:intergenic 45.0%
CTCATATGAGGTGCATGTGA+GGG + chr1.4:64743756-64743775 MS.gene058781:intron 45.0%
CTGGAATGAATGGTGTGATC+CGG + chr1.4:64745129-64745148 MS.gene058781:CDS 45.0%
GCCTGCAACAGATCAGTTAT+TGG - chr1.4:64743787-64743806 None:intergenic 45.0%
GCTATCTGATGAAGGAGGAT+TGG - chr1.4:64745158-64745177 None:intergenic 45.0%
GCTTGAGCTTCAATATGTGC+CGG + chr1.4:64743409-64743428 MS.gene058781:CDS 45.0%
GGCATGTTAGGATGCTTACT+AGG + chr1.4:64742190-64742209 MS.gene058781:CDS 45.0%
GTCTCAAAAGAACGCGATGA+TGG + chr1.4:64742765-64742784 MS.gene058781:CDS 45.0%
GTTCATCCGCTATCTGATGA+AGG - chr1.4:64745166-64745185 None:intergenic 45.0%
TACAAGTGAGGGTGGTGATA+AGG + chr1.4:64743227-64743246 MS.gene058781:CDS 45.0%
TCCAGAGATGGAGATAGTTG+AGG + chr1.4:64742639-64742658 MS.gene058781:CDS 45.0%
TCCTTGACCTTCTAGTCAGA+TGG + chr1.4:64743850-64743869 MS.gene058781:intron 45.0%
TCTCATATGAGGTGCATGTG+AGG + chr1.4:64743755-64743774 MS.gene058781:intron 45.0%
TGACAAAGAAGCTACTCGAG+AGG + chr1.4:64744880-64744899 MS.gene058781:CDS 45.0%
TGGAATTGGGGCAAGAAGTT+GGG + chr1.4:64742139-64742158 MS.gene058781:CDS 45.0%
TGTGATTGACCCTGATGTGT+TGG + chr1.4:64742393-64742412 MS.gene058781:CDS 45.0%
TTCCAAACAGTGATGAGCCA+TGG + chr1.4:64742808-64742827 MS.gene058781:CDS 45.0%
! AACTATCTCCATCTCTGGAG+CGG - chr1.4:64742638-64742657 None:intergenic 45.0%
! AGGTGAGGGAGATTTTCTTG+AGG + chr1.4:64742106-64742125 MS.gene058781:CDS 45.0%
! GAGGCAGAATGTGATGGAAT+TGG + chr1.4:64742125-64742144 MS.gene058781:CDS 45.0%
! GGCAGAATGTGATGGAATTG+GGG + chr1.4:64742127-64742146 MS.gene058781:CDS 45.0%
! GTTTTTCACCTGCACGAAGT+AGG - chr1.4:64745199-64745218 None:intergenic 45.0%
! TTTGGAATGACTTCCTAGCC+TGG - chr1.4:64742795-64742814 None:intergenic 45.0%
!! CCTCTTTTAGGAGCATATCC+TGG + chr1.4:64744158-64744177 MS.gene058781:intron 45.0%
!! GATGAAGGAGGATTGGTTTC+CGG - chr1.4:64745151-64745170 None:intergenic 45.0%
!!! AGCTTGTGCTTTTTGGGGTT+AGG + chr1.4:64744378-64744397 MS.gene058781:intron 45.0%
!!! ATCTGCTTTTTCGACTAGCC+AGG - chr1.4:64744179-64744198 None:intergenic 45.0%
!!! CCGAGGGAATCTTGTTTTTC+GGG + chr1.4:64743197-64743216 MS.gene058781:CDS 45.0%
!!! TGTGCTTTTTGGGGTTAGGT+GGG + chr1.4:64744382-64744401 MS.gene058781:intron 45.0%
!!! TTGTGCTTTTTGGGGTTAGG+TGG + chr1.4:64744381-64744400 MS.gene058781:intron 45.0%
AAAGAAGCTACTCGAGAGGC+TGG + chr1.4:64744884-64744903 MS.gene058781:CDS 50.0%
AAGAAGCTACTCGAGAGGCT+GGG + chr1.4:64744885-64744904 MS.gene058781:CDS 50.0%
AAGAGTCTCGACACAACGGT+TGG - chr1.4:64743884-64743903 None:intergenic 50.0%
AAGGATAGATGCATGCTGGC+TGG + chr1.4:64745110-64745129 MS.gene058781:CDS 50.0%
ACACAGGGCCTATTTCGTAC+AGG - chr1.4:64744601-64744620 None:intergenic 50.0%
ACTCCTGGACCAATAGGCAA+GGG - chr1.4:64744576-64744595 None:intergenic 50.0%
AGGAGTGGCCTGTACGAAAT+AGG + chr1.4:64744590-64744609 MS.gene058781:intron 50.0%
ATTCCCTTGCCTATTGGTCC+AGG + chr1.4:64744570-64744589 MS.gene058781:intron 50.0%
CATCCGCTATCTGATGAAGG+AGG - chr1.4:64745163-64745182 None:intergenic 50.0%
CTTCAATATGTGCCGGAGGT+TGG + chr1.4:64743416-64743435 MS.gene058781:CDS 50.0%
GAATTTCAAAGGAGGGACGC+CGG + chr1.4:64742546-64742565 MS.gene058781:CDS 50.0%
GAGGCCAATGCATTCAGTTG+TGG + chr1.4:64742837-64742856 MS.gene058781:CDS 50.0%
GATGGAGATAGTTGAGGTGG+TGG + chr1.4:64742645-64742664 MS.gene058781:CDS 50.0%
GCCATCTGACTAGAAGGTCA+AGG - chr1.4:64743854-64743873 None:intergenic 50.0%
GGCCAATGCATTCAGTTGTG+GGG + chr1.4:64742839-64742858 MS.gene058781:CDS 50.0%
GTCCATGGCTCATCACTGTT+TGG - chr1.4:64742813-64742832 None:intergenic 50.0%
GTGGTTGCCATCTGACTAGA+AGG - chr1.4:64743860-64743879 None:intergenic 50.0%
TATTTCGTACAGGCCACTCC+TGG - chr1.4:64744591-64744610 None:intergenic 50.0%
TCATCAGGGTTTGAGTGCCT+GGG + chr1.4:64744927-64744946 MS.gene058781:CDS 50.0%
TCTTCCAGGTTCGGACTCTA+GGG + chr1.4:64742606-64742625 MS.gene058781:CDS 50.0%
TGAGCTTCAATATGTGCCGG+AGG + chr1.4:64743412-64743431 MS.gene058781:CDS 50.0%
TGCACCAAACCCTGAGAGTT+TGG - chr1.4:64744723-64744742 None:intergenic 50.0%
TGCTCTTGTGTCGTGTGCAA+CGG + chr1.4:64742041-64742060 MS.gene058781:CDS 50.0%
TTCATCAGGGTTTGAGTGCC+TGG + chr1.4:64744926-64744945 MS.gene058781:CDS 50.0%
TTCTTCCAGGTTCGGACTCT+AGG + chr1.4:64742605-64742624 MS.gene058781:CDS 50.0%
! TGCATGCTGGCTGGAATGAA+TGG + chr1.4:64745119-64745138 MS.gene058781:CDS 50.0%
!! AACTCTCAGGGTTTGGTGCA+AGG + chr1.4:64744723-64744742 MS.gene058781:CDS 50.0%
!!! ATGGTTTTGAAGTGGCGGCA+AGG + chr1.4:64745018-64745037 MS.gene058781:CDS 50.0%
AGAAGGAGAGGGATCAACGG+CGG - chr1.4:64742078-64742097 None:intergenic 55.0%
AGATCGGTCCTACTTCGTGC+AGG + chr1.4:64745188-64745207 MS.gene058781:CDS 55.0%
CAAACCCTAGAGTCCGAACC+TGG - chr1.4:64742613-64742632 None:intergenic 55.0%
CACACGACACAAGAGCAGTG+AGG - chr1.4:64742038-64742057 None:intergenic 55.0%
CACCTACCTGTACCAACCTC+CGG - chr1.4:64743431-64743450 None:intergenic 55.0%
CACTCCTGGACCAATAGGCA+AGG - chr1.4:64744577-64744596 None:intergenic 55.0%
CAGAGCCACTTATAGCACCC+AGG - chr1.4:64744947-64744966 None:intergenic 55.0%
CTAGGAGTTGCGAGTAGTGG+CGG + chr1.4:64742463-64742482 MS.gene058781:CDS 55.0%
CTTGCCTATTGGTCCAGGAG+TGG + chr1.4:64744575-64744594 MS.gene058781:intron 55.0%
GAATGACTTCCTAGCCTGGC+TGG - chr1.4:64742791-64742810 None:intergenic 55.0%
GAGAACCGACGCGTGAGAAA+GGG - chr1.4:64742689-64742708 None:intergenic 55.0%
TCTCGACACAACGGTTGGAG+TGG - chr1.4:64743879-64743898 None:intergenic 55.0%
TGTTGAACACGCGTGACCGA+GGG + chr1.4:64743181-64743200 MS.gene058781:CDS 55.0%
TTGAAGTGGCGGCAAGGATC+AGG + chr1.4:64745024-64745043 MS.gene058781:CDS 55.0%
TTGTTGAACACGCGTGACCG+AGG + chr1.4:64743180-64743199 MS.gene058781:CDS 55.0%
! AGTTGAGGTGGTGGCTGATC+AGG + chr1.4:64742654-64742673 MS.gene058781:CDS 55.0%
! CAGTGATGAGCCATGGACTG+AGG + chr1.4:64742815-64742834 MS.gene058781:CDS 55.0%
! CTGGGTGCTATAAGTGGCTC+TGG + chr1.4:64744945-64744964 MS.gene058781:CDS 55.0%
! GAGTGCCTGGGTGCTATAAG+TGG + chr1.4:64744939-64744958 MS.gene058781:CDS 55.0%
! TGATGAGCCATGGACTGAGG+AGG + chr1.4:64742818-64742837 MS.gene058781:CDS 55.0%
!! CAGGTTCGGACTCTAGGGTT+TGG + chr1.4:64742611-64742630 MS.gene058781:CDS 55.0%
!! GGTGCTATAAGTGGCTCTGG+TGG + chr1.4:64744948-64744967 MS.gene058781:CDS 55.0%
!! TATGTGCCGGAGGTTGGTAC+AGG + chr1.4:64743422-64743441 MS.gene058781:CDS 55.0%
AGTTGCGAGTAGTGGCGGTG+GGG + chr1.4:64742468-64742487 MS.gene058781:CDS 60.0%
CAGGCCACTCCTGGACCAAT+AGG - chr1.4:64744582-64744601 None:intergenic 60.0%
CGACGCGTGAGAAAGGGCTA+CGG - chr1.4:64742683-64742702 None:intergenic 60.0%
CGAGAACCGACGCGTGAGAA+AGG - chr1.4:64742690-64742709 None:intergenic 60.0%
CGTAGCCCTTTCTCACGCGT+CGG + chr1.4:64742681-64742700 MS.gene058781:CDS 60.0%
GAGTTGCGAGTAGTGGCGGT+GGG + chr1.4:64742467-64742486 MS.gene058781:CDS 60.0%
GCAAGCGGCTTCCCTCAACA+TGG - chr1.4:64743034-64743053 None:intergenic 60.0%
GGTTTGGACCGCTCCAGAGA+TGG + chr1.4:64742627-64742646 MS.gene058781:CDS 60.0%
! GCATTGGCCTCCTCAGTCCA+TGG - chr1.4:64742828-64742847 None:intergenic 60.0%
! TGAGGAGTTGGGTGCTGTCG+CGG + chr1.4:64742495-64742514 MS.gene058781:CDS 60.0%
! TGAGGTGGTGGCTGATCAGG+TGG + chr1.4:64742657-64742676 MS.gene058781:CDS 60.0%
!! GGTGGGGGTACTGAGGAGTT+GGG + chr1.4:64742484-64742503 MS.gene058781:CDS 60.0%
!! TGCCGGAGGTTGGTACAGGT+AGG + chr1.4:64743426-64743445 MS.gene058781:intron 60.0%
CAAAGGAGGGACGCCGGAGT+TGG + chr1.4:64742552-64742571 MS.gene058781:CDS 65.0%
GGAGTTGCGAGTAGTGGCGG+TGG + chr1.4:64742466-64742485 MS.gene058781:CDS 65.0%
GTTGCGAGTAGTGGCGGTGG+GGG + chr1.4:64742469-64742488 MS.gene058781:CDS 65.0%
! CGATGATGGCCAGCCAGGCT+AGG + chr1.4:64742779-64742798 MS.gene058781:CDS 65.0%
! GAACGCGATGATGGCCAGCC+AGG + chr1.4:64742774-64742793 MS.gene058781:CDS 65.0%
!! CGGTGGGGGTACTGAGGAGT+TGG + chr1.4:64742483-64742502 MS.gene058781:CDS 65.0%
!! TAGTGGCGGTGGGGGTACTG+AGG + chr1.4:64742477-64742496 MS.gene058781:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 64741990 64745223 64741990 ID=MS.gene058781
chr1.4 mRNA 64741990 64745223 64741990 ID=MS.gene058781.t1;Parent=MS.gene058781
chr1.4 exon 64741990 64742223 64741990 ID=MS.gene058781.t1.exon1;Parent=MS.gene058781.t1
chr1.4 CDS 64741990 64742223 64741990 ID=cds.MS.gene058781.t1;Parent=MS.gene058781.t1
chr1.4 exon 64742276 64743443 64742276 ID=MS.gene058781.t1.exon2;Parent=MS.gene058781.t1
chr1.4 CDS 64742276 64743443 64742276 ID=cds.MS.gene058781.t1;Parent=MS.gene058781.t1
chr1.4 exon 64744693 64745223 64744693 ID=MS.gene058781.t1.exon3;Parent=MS.gene058781.t1
chr1.4 CDS 64744693 64745223 64744693 ID=cds.MS.gene058781.t1;Parent=MS.gene058781.t1
Gene Sequence

>MS.gene058781

TCATCCTTCTTTTCAACTCTTGCTTTCCCTTACTGTTGCTAAATTCCTCACTGCTCTTGTGTCGTGTGCAACGGCATTGACACTTCCGCCGTTGATCCCTCTCCTTCTTAGAATTAAGGTGAGGGAGATTTTCTTGAGGCAGAATGTGATGGAATTGGGGCAAGAAGTTGGGATTATGAAGAAACAAAAGGAAGCTAGTTGGCATGTTAGGATGCTTACTAGGGAAATTAGGAAGTCTCTTGATAAACATACAATTTTGTATACTACTCTTGTTGAGCTTTCTAAGGCTTTGGATTTGCATAATTGTGCTGTTTTGGATGCCGAATGATGATAGGAGAGAGATGTATTTGACTCATGAATTGAAATCGGATTCGGGTAAGAGTTTTCATCATAATTCTATTCCTGTGATTGACCCTGATGTGTTGGAGATAAGGAAAACTAAAGGGGTTAGGATTTTGAGGCCTGAATCTAAACTAGGAGTTGCGAGTAGTGGCGGTGGGGGTACTGAGGAGTTGGGTGCTGTCGCGGCTATTCGTATGCCGATGCTTCATGTTTCGAATTTCAAAGGAGGGACGCCGGAGTTGGTTGATACATGTTATGCTATACTAGTTTTGGTTCTTCCAGGTTCGGACTCTAGGGTTTGGACCGCTCCAGAGATGGAGATAGTTGAGGTGGTGGCTGATCAGGTGGCCGTAGCCCTTTCTCACGCGTCGGTTCTCGAAGAGTCTTATTTAATGAGAGAGAAACTCGAAGAGCAAAACCGAGCATTGCAACAGTCTCAAAAGAACGCGATGATGGCCAGCCAGGCTAGGAAGTCATTCCAAACAGTGATGAGCCATGGACTGAGGAGGCCAATGCATTCAGTTGTGGGGATGCTTTCATTGTTTCAAGAGGGTAATATGAGGACTGAACAAAAGATTATTGGTGACACAATGTTGAAAGTCGGCAATGTGCTCTCGAGTTTAGTAAACGATGTAATGGATATCTCTGAAAATAAAAAGGGTGGCCTTCAGTTAGAGATGAAACCTTTCCTTCTACATTCCATGTTGAGGGAAGCCGCTTGCATTGCTAAGTGCTTGTGTGTGTATCAAGGGTTTGGTTTTCAAATTGATGTCGAAAAGTCTTTGCCTGAAAAAGTTTTAGGCGATGAAGCAAGGACTTTTCAAGTAATTATGCATATTATTGGCTATTTGTTGAACACGCGTGACCGAGGGAATCTTGTTTTTCGGGTTTTTGTTACAAGTGAGGGTGGTGATAAGGATGACAAAAAAATTGGTGTATGGAGATCGAGCAGCCCAGTTGAGTATGTAGACATAAAATTTGATTTTCAGATTACTGGTAGTTCTCAGTCAGATGAACCGATTTCAACGAAACAACAGATTGGTAGGAGGCTGAATCACAACAGTGAATCTAAGGAGGGCTTGAGCTTCAATATGTGCCGGAGGTTGGTACAGGTAGGTGCATCACTGTCTATATTATATATGTGGATCATAATCTCCTTGATTGTCTATGTTATGTCTGAGTATCAAATATGTCATTTATTGTTCAAATTTAATGCTTAAAGAATGATGTTTGGTTTGACGAATTTAATGTTGACCTGCATCTTCATTTGGGATCAAAATGAATGCTAGCATGCTTGCTACTAAACTTTAGTGAAAGTTTTTGTTTCTTCAAACCATTCATTAAGGATGTAAAATTATGTGTGATCACTTATCTGTTCATTCGAAGTCACTGATTACTTATATTTAAAAAGTGCAATAACTGATCTCATATGAGGTGCATGTGAGGGTCCGACCAATAACTGATCTGTTGCAGGCAATCTTACCCTGCAATTGCAAGAAACTGATTCTACGAATCGGATCCTTGACCTTCTAGTCAGATGGCAACCACTCCAACCGTTGTGTCGAGACTCTTTTTTTCACTGATAACTTATATTTGACAATTTTTCGTAGATTTCTCTCTCCATACTAATTTCAGCTAAGAGCTGACAAGCCTCCTCTGTTATAACCTAAATCTTTCAACATAAGAAATAAAATAAAAAAATTAATAAGAACATAATTGTAATCCTTTTATCTTAATAGTATCACGGAGAAGCTATTTTTCCCCCATGTTGGAAGGATCCTTTTGAGTTTACATCACACAAGCATGCATTTGCATAATTTTGTTTTCCTCTTTTAGGAGCATATCCTGGCTAGTCGAAAAAGCAGATTCTGACATGACAGGCATCATTAGAGAAACATGAGGATTGTAATAACACAGAAACTGCATGATTGTGGTGTCTTTTCTTGAATTGTAAGGTCATTCAGTTAGTTTTAGAATTCCAATATGAACAAGACTACAAAAAATCTCACTTCCTTTTCATCAATGGAAATAGGTGAACAATAAGAAAGCTTGTGCTTTTTGGGGTTAGGTGGGTGCATTATTTTATTATATAGAAAAATAATAGTAAAGTAGCATCTTTTGTGCCTTAAAATCTGGTAAAGTAGGACCTTACTTCTTTATACTTATAATAGTATCCAATTATTTTATTAAAGCACTATTATGATTTCTCTCTCTTTTTGCCACAAATCAGAACTTGTTATTCCCTTGCCTATTGGTCCAGGAGTGGCCTGTACGAAATAGGCCCTGTGTAATTATTTAATTAATCATGGCATGCTTGTTTTTGTAATTCTGACTTTATTTACATTGTGGAATCTTATGCAGATAATGCAAGGTAATATATGGATATTACCAAACTCTCAGGGTTTGGTGCAAGGCGTGTCACTTCTTCTAAAGTTTCAGATAGGACCATCGCTTGAAAGATACATGTTTGCACCTAAAGATTATTCAAATTCACAGTTTGGAGGCCTCAAGATTTTGCTAGCAGATGATGATAGTTTAAATAGGATCGTGACAAAGAAGCTACTCGAGAGGCTGGGCTGTCTAGTAACAGCAGTTTCATCAGGGTTTGAGTGCCTGGGTGCTATAAGTGGCTCTGGTGGTAACTCATTCAAAATTATCATGTTAGACATTCACATGCCTGAAATGGATGGTTTTGAAGTGGCGGCAAGGATCAGGAAATTCAATGGCCCTAATTGGCCTTTGATCATAGCTCTTATAGCTAATGCAGAAGAGCAAGTTAAGGATAGATGCATGCTGGCTGGAATGAATGGTGTGATCCGGAAACCAATCCTCCTTCATCAGATAGCGGATGAACTTAGATCGGTCCTACTTCGTGCAGGTGAAAAACTGTGA

Protein sequence

>MS.gene058781.t1

SSFFSTLAFPYCCUIPHCSCVVCNGIDTSAVDPSPSUNUGEGDFLEAECDGIGARSWDYEETKGSULACUDAYUGNUEALDLHNCAVLDAEUUUERDVFDSUIEIGFGUEFSSUFYSCDUPUCVGDKENURGUDFEAUIUTRSCEUWRWGYUGVGCCRGYSYADASCFEFQRRDAGVGUYMLCYTSFGSSRFGLUGLDRSRDGDSUGGGUSGGRSPFSRVGSRRVLFNERETRRAKPSIATVSKERDDGQPGUEVIPNSDEPWTEEANAFSCGDAFIVSRGUYEDUTKDYWUHNVESRQCALEFSKRCNGYLUKUKGWPSVRDETFPSTFHVEGSRLHCUVLVCVSRVWFSNUCRKVFAUKSFRRUSKDFSSNYAYYWLFVEHAUPRESCFSGFCYKUGWUUGUQKNWCMEIEQPSUVCRHKIUFSDYWUFSVRUTDFNETTDWUEAESQQUIUGGLELQYVPEVGTDNARUYMDITKLSGFGARRVTSSKVSDRTIAUKIHVCTURLFKFTVWRPQDFASRUUUFKUDRDKEATREAGLSSNSSFIRVUVPGCYKWLWWULIQNYHVRHSHAUNGWFUSGGKDQEIQWPULAFDHSSYSUCRRASUGUMHAGWNEWCDPETNPPSSDSGUTUIGPTSCRUKTV