AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene074324

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074324.t1 MTR_2g094020 94.306 843 44 1 1 839 1 843 0.0 1654
MS.gene074324.t1 MTR_2g094060 92.677 833 61 0 1 833 1 833 0.0 1601
MS.gene074324.t1 MTR_2g094060 92.135 801 63 0 1 801 1 801 0.0 1531
MS.gene074324.t1 MTR_4g059680 77.262 840 181 4 1 832 1 838 0.0 1354
MS.gene074324.t1 MTR_2g094060 92.566 686 51 0 1 686 1 686 0.0 1315
MS.gene074324.t1 MTR_8g016230 54.717 848 354 12 3 832 2 837 0.0 937
MS.gene074324.t1 MTR_5g021190 54.971 855 346 17 1 833 1 838 0.0 934
MS.gene074324.t1 MTR_2g100110 55.690 826 340 11 21 832 27 840 0.0 922
MS.gene074324.t1 MTR_8g085210 51.963 866 358 15 12 832 44 896 0.0 883
MS.gene074324.t1 MTR_1g018200 58.815 709 273 8 21 719 30 729 0.0 857
MS.gene074324.t1 MTR_2g042610 52.764 832 352 14 18 833 23 829 0.0 853
MS.gene074324.t1 MTR_2g039120 56.319 728 298 8 2 719 8 725 0.0 853
MS.gene074324.t1 MTR_1g023120 55.694 720 294 8 16 723 24 730 0.0 837
MS.gene074324.t1 MTR_2g039120 56.566 693 281 8 2 684 8 690 0.0 814
MS.gene074324.t1 MTR_3g096900 56.498 731 295 8 20 730 25 752 0.0 811
MS.gene074324.t1 MTR_3g112370 52.349 745 323 10 1 726 1 732 0.0 810
MS.gene074324.t1 MTR_5g025830 49.882 846 355 21 19 832 23 831 0.0 795
MS.gene074324.t1 MTR_5g024080 48.575 842 375 16 13 832 1 806 0.0 791
MS.gene074324.t1 MTR_1g023120 55.263 684 282 7 52 723 1 672 0.0 786
MS.gene074324.t1 MTR_3g096900 57.459 677 273 7 20 684 25 698 0.0 765
MS.gene074324.t1 MTR_3g005570 46.941 850 400 13 1 838 5 815 0.0 759
MS.gene074324.t1 MTR_4g073290 45.006 851 415 16 5 833 6 825 0.0 731
MS.gene074324.t1 MTR_2g039120 56.160 625 256 6 2 616 8 624 0.0 724
MS.gene074324.t1 MTR_3g117840 42.807 848 432 15 9 834 12 828 0.0 709
MS.gene074324.t1 MTR_2g100110 59.720 571 212 6 21 582 27 588 0.0 707
MS.gene074324.t1 MTR_2g039120 56.729 587 241 4 2 582 8 587 0.0 697
MS.gene074324.t1 MTR_3g096910 50.000 718 316 12 22 729 27 711 0.0 689
MS.gene074324.t1 MTR_3g096900 58.017 605 240 6 20 613 25 626 0.0 687
MS.gene074324.t1 MTR_3g088520 48.536 717 324 11 8 718 12 689 0.0 660
MS.gene074324.t1 MTR_3g088520 48.291 673 303 11 52 718 1 634 0.0 613
MS.gene074324.t1 MTR_3g096910 45.960 594 278 12 146 729 1 561 3.48e-167 497
MS.gene074324.t1 MTR_5g022590 40.798 326 154 7 41 364 11 299 1.21e-76 255
MS.gene074324.t1 MTR_5g022590 34.483 116 71 2 686 797 304 418 1.96e-15 80.1
MS.gene074324.t1 MTR_4g126330 35.437 412 162 11 277 684 131 442 5.92e-65 224
MS.gene074324.t1 MTR_4g126330 68.478 92 29 0 77 168 25 116 1.14e-37 147
MS.gene074324.t1 MTR_3g005610 36.525 282 144 7 434 708 27 280 2.93e-42 157
MS.gene074324.t1 MTR_2g059440 34.386 285 145 8 434 708 27 279 5.36e-36 139
MS.gene074324.t1 MTR_2g100000 31.402 328 184 9 32 328 64 381 7.35e-30 127
MS.gene074324.t1 MTR_2g059430 30.682 264 115 5 450 708 11 211 5.41e-25 105
MS.gene074324.t1 MTR_2g100000 29.365 252 137 9 108 328 2 243 5.42e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074324.t1 AT2G28470 72.155 826 213 7 21 833 31 852 0.0 1233
MS.gene074324.t1 AT2G28470 72.155 826 213 7 21 833 31 852 0.0 1233
MS.gene074324.t1 AT2G28470 72.155 826 213 7 21 833 25 846 0.0 1233
MS.gene074324.t1 AT2G28470 72.155 826 213 7 21 833 25 846 0.0 1233
MS.gene074324.t1 AT2G28470 74.041 678 162 5 19 686 29 702 0.0 1046
MS.gene074324.t1 AT4G36360 54.843 826 347 13 22 833 33 846 0.0 934
MS.gene074324.t1 AT4G36360 54.843 826 346 14 22 833 33 845 0.0 930
MS.gene074324.t1 AT3G13750 55.226 842 349 12 7 833 19 847 0.0 924
MS.gene074324.t1 AT2G32810 51.941 876 372 13 2 836 13 880 0.0 919
MS.gene074324.t1 AT2G32810 52.148 838 353 12 2 799 13 842 0.0 888
MS.gene074324.t1 AT5G20710 50.118 848 377 15 2 832 8 826 0.0 844
MS.gene074324.t1 AT4G26140 55.249 724 300 8 12 719 10 725 0.0 831
MS.gene074324.t1 AT1G45130 54.324 740 310 11 1 721 1 731 0.0 824
MS.gene074324.t1 AT3G52840 55.708 727 296 10 6 719 65 778 0.0 822
MS.gene074324.t1 AT3G52840 55.708 727 296 10 6 719 11 724 0.0 821
MS.gene074324.t1 AT4G26140 53.672 749 298 10 12 719 10 750 0.0 818
MS.gene074324.t1 AT5G63810 54.036 731 319 8 3 721 13 738 0.0 813
MS.gene074324.t1 AT5G56870 54.951 717 298 9 14 719 21 723 0.0 808
MS.gene074324.t1 AT1G31740 48.109 846 358 15 1 832 1 779 0.0 785
MS.gene074324.t1 AT4G26140 53.686 719 290 10 1 684 5 715 0.0 781
MS.gene074324.t1 AT1G77410 47.087 841 398 15 6 833 9 815 0.0 740
MS.gene074324.t1 AT1G77410 46.809 846 398 16 6 833 9 820 0.0 734
MS.gene074324.t1 AT1G45130 54.083 649 279 9 83 721 13 652 0.0 722
MS.gene074324.t1 AT4G26140 56.431 622 247 6 12 617 10 623 0.0 720
MS.gene074324.t1 AT4G26140 56.431 622 247 6 12 617 10 623 0.0 720
MS.gene074324.t1 AT4G26140 56.109 622 251 6 12 617 10 625 0.0 717
MS.gene074324.t1 AT2G16730 42.017 833 429 15 22 833 44 843 0.0 673
MS.gene074324.t1 AT5G63800 48.295 704 326 11 22 718 32 704 0.0 672
MS.gene074324.t1 AT4G35010 41.587 832 434 15 22 833 41 840 0.0 666
MS.gene074324.t1 AT4G26140 58.564 543 208 4 12 541 10 548 0.0 659
MS.gene074324.t1 AT4G26140 56.338 568 206 6 12 541 10 573 0.0 646
MS.gene074324.t1 AT4G26140 56.338 568 206 6 12 541 10 573 0.0 646
MS.gene074324.t1 AT4G38590 41.500 800 416 16 52 832 1 767 0.0 636
MS.gene074324.t1 AT4G38590 41.125 800 423 16 48 832 65 831 0.0 628
MS.gene074324.t1 AT1G77410 45.379 725 349 15 122 833 19 709 0.0 590
MS.gene074324.t1 AT1G77410 45.379 725 349 15 122 833 19 709 0.0 590
MS.gene074324.t1 AT5G20710 46.462 650 302 15 200 832 1 621 0.0 573
MS.gene074324.t1 AT2G04060 37.500 368 153 9 287 651 23 316 3.50e-58 206
MS.gene074324.t1 AT2G04062 41.808 177 82 2 18 194 3 158 4.98e-40 145
MS.gene074324.t1 AT1G72990 35.241 332 174 11 32 332 18 339 1.10e-39 156
MS.gene074324.t1 AT1G72990 35.241 332 174 11 32 332 73 394 1.69e-39 157
MS.gene074324.t1 AT1G72990 35.241 332 174 11 32 332 73 394 1.69e-39 157
MS.gene074324.t1 AT1G72990 34.268 321 170 11 43 332 22 332 1.48e-34 141
MS.gene074324.t1 AT3G53080 42.857 91 50 2 743 832 63 152 3.46e-17 80.1
MS.gene074324.t1 AT3G53075 42.857 84 45 3 750 832 81 162 3.76e-14 71.6
MS.gene074324.t1 AT3G53075 42.857 84 45 3 750 832 111 192 5.20e-14 72.0

Find 198 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCTTCACAAAGCTTTA+TGG 0.109681 2.2:+7178406 None:intergenic
AAACGTAGGGTCTTGATTTC+TGG 0.165476 2.2:-7180584 MS.gene074324:CDS
AACTGACAATGAACCATTTA+AGG 0.172483 2.2:-7179735 MS.gene074324:intron
TTGACAGTGGTTTCCCTCTT+TGG 0.180260 2.2:-7179787 MS.gene074324:intron
CAAATCAACGGTTGGTTCTT+AGG 0.201157 2.2:+7176640 None:intergenic
TGACATTTGGTTTGAGTAAA+AGG 0.209652 2.2:+7176331 None:intergenic
TCCATAGCTTGCAAATTTAA+TGG 0.221804 2.2:+7175946 None:intergenic
CTTTGGCTTCACTTCATTCC+AGG 0.251644 2.2:-7179770 MS.gene074324:CDS
GAAGGTCACCTTACCTTAAA+TGG 0.258918 2.2:+7179722 None:intergenic
AAAGGTGAGGCTTGGGTAAA+TGG 0.261772 2.2:-7176430 MS.gene074324:CDS
TTGATACAGGTCGGCCTAAA+AGG 0.267162 2.2:-7176721 MS.gene074324:intron
TTTCCAGAAATTACTGTGAT+TGG 0.274947 2.2:+7177082 None:intergenic
AACTTACATGAACCTGTTAA+AGG 0.282398 2.2:-7180376 MS.gene074324:CDS
TAGAAACTTCTAGTTCAAAA+TGG 0.289791 2.2:-7177700 MS.gene074324:CDS
GAGTTTAACAGTTGGACTTC+AGG 0.290254 2.2:-7177041 MS.gene074324:intron
CTTAGGTTTGTCTTTGTTCC+CGG 0.301351 2.2:+7177120 None:intergenic
CTGGTAAATCATACATCAAT+TGG 0.305487 2.2:-7179393 MS.gene074324:CDS
TTTCCCCTGATTCTGTATCT+TGG 0.306746 2.2:+7176023 None:intergenic
CATCTTTAGATTTCTGAATA+AGG 0.312398 2.2:+7180434 None:intergenic
TACATTTCAAAATTACTATA+TGG 0.316656 2.2:-7178888 MS.gene074324:intron
TATATGCTGCAGGAATTATT+AGG 0.322005 2.2:-7178466 MS.gene074324:intron
CTCTTGATACAGGTGTTCCT+TGG 0.323700 2.2:-7179351 MS.gene074324:CDS
ACTACTTGTGGTACTCATTA+AGG 0.331342 2.2:-7177583 MS.gene074324:intron
TTCATAAACGGAAAGCTTGC+AGG 0.332162 2.2:-7177401 MS.gene074324:intron
CTAAGAACCAACCGTTGATT+TGG 0.333687 2.2:-7176639 MS.gene074324:CDS
GACAAAGCATTGGGCGATAC+TGG 0.337595 2.2:-7176408 MS.gene074324:CDS
AAGAGAACCTGGCCTTTAAC+AGG 0.337674 2.2:+7180364 None:intergenic
TCCATTAAATTTGCAAGCTA+TGG 0.340886 2.2:-7175947 MS.gene074324:CDS
GCCCTTCATGCTTTCATAAA+CGG 0.346473 2.2:-7177413 MS.gene074324:CDS
GCTTCAACAGCTAAACTCTT+TGG 0.347957 2.2:+7175276 None:intergenic
AAAACCTGGGATAAAATTAT+AGG 0.349049 2.2:+7179560 None:intergenic
AGCGGTGAATCGCTTCATTT+CGG 0.355773 2.2:+7179634 None:intergenic
AAATCAACGGTTGGTTCTTA+GGG 0.361145 2.2:+7176641 None:intergenic
GAGATTACCTGATTATGATT+AGG 0.371095 2.2:+7175971 None:intergenic
CAACACTCTTGTATTGTTTG+AGG 0.376145 2.2:-7176149 MS.gene074324:CDS
TCCACAATTCATGTGACATT+TGG 0.376285 2.2:+7176318 None:intergenic
GATGCACCAATTGATGAGTA+TGG 0.385338 2.2:-7178676 MS.gene074324:intron
CGGACGCTGCAGAAGCAATA+AGG 0.386639 2.2:-7175891 MS.gene074324:CDS
TTCCAGAAATTACTGTGATT+GGG 0.394341 2.2:+7177083 None:intergenic
TCATATGCACATCAGAACTA+TGG 0.396147 2.2:-7176926 MS.gene074324:intron
GGCCTAAAAGGTGAAGATTT+AGG 0.396713 2.2:-7176709 MS.gene074324:CDS
TGCCAGATTGAAAATGAGTA+TGG 0.398646 2.2:-7179442 MS.gene074324:intron
TGGAACCAAGATACAGAATC+AGG 0.402684 2.2:-7176028 MS.gene074324:CDS
CAACTGTCCTAATCATAATC+AGG 0.402904 2.2:-7175978 MS.gene074324:CDS
GGAGTATCAACTGATACATT+TGG 0.403792 2.2:-7175318 MS.gene074324:CDS
AGCACTACATTCTTGCAATC+TGG 0.405989 2.2:+7177992 None:intergenic
GAATTCTTAGGGAGTCAAAC+CGG 0.407325 2.2:-7177139 MS.gene074324:intron
TCTTGATACAGGTGTTCCTT+GGG 0.408696 2.2:-7179350 MS.gene074324:CDS
ATCCCAATCACAGTAATTTC+TGG 0.410481 2.2:-7177085 MS.gene074324:CDS
CATAGAGCATTGCTCATTGA+TGG 0.416348 2.2:-7180608 MS.gene074324:CDS
TTCAAACCTTTCAATATCAC+TGG 0.417812 2.2:+7176866 None:intergenic
CTTCTAGTTCAAAATGGAGT+TGG 0.418426 2.2:-7177694 MS.gene074324:CDS
CCCGTGAAGTCAATCGCAAC+TGG 0.421516 2.2:+7176460 None:intergenic
GGTCTCTCTAGTGGAAATTC+CGG 0.429067 2.2:-7176688 MS.gene074324:CDS
AATACAAGAGTGTTGTCGTT+TGG 0.430388 2.2:+7176157 None:intergenic
GTCCATATGTTTGTGCTGAA+TGG 0.430727 2.2:-7179885 MS.gene074324:CDS
GTCATACCATACTCATCAAT+TGG 0.433834 2.2:+7178670 None:intergenic
TGGTTCCACAAGTCTATTTG+AGG 0.439591 2.2:+7176043 None:intergenic
TGCGATTGACTTCACGGGGA+TGG 0.439820 2.2:-7176455 MS.gene074324:CDS
TCCAGTTGCGATTGACTTCA+CGG 0.439836 2.2:-7176461 MS.gene074324:CDS
TTGACCAAGAGAAGTAATCT+TGG 0.441974 2.2:+7178367 None:intergenic
TTAGATTTCTGAATAAGGTC+TGG 0.443250 2.2:+7180439 None:intergenic
AACTTCGTATCTGAAGATAT+CGG 0.444285 2.2:-7177728 MS.gene074324:CDS
AGTGTCCACGTTGGAGAGAA+AGG 0.446437 2.2:+7178084 None:intergenic
TTCCATTCAGCACAAACATA+TGG 0.448715 2.2:+7179883 None:intergenic
GCGATTGACTTCACGGGGAT+GGG 0.451344 2.2:-7176454 MS.gene074324:CDS
CAACATGTTATATGTCTGTA+TGG 0.455737 2.2:+7175238 None:intergenic
CTCTTTGGCACTCCTCTACA+AGG 0.457641 2.2:+7175291 None:intergenic
TAAATGGTTCATTGTCAGTT+CGG 0.461736 2.2:+7179738 None:intergenic
GATGGGAAAAGGTGAGGCTT+GGG 0.463029 2.2:-7176437 MS.gene074324:CDS
ACATGGGGAGCGGGGATCAT+CGG 0.463376 2.2:-7176890 MS.gene074324:CDS
TGACCAAGAGAAGTAATCTT+GGG 0.464627 2.2:+7178368 None:intergenic
ATCGCAGTAAAATCCATTGC+AGG 0.465312 2.2:+7179146 None:intergenic
GTCCTTCACATTGAATCGCT+TGG 0.467032 2.2:-7177440 MS.gene074324:CDS
TTTGGCTTCACTTCATTCCA+GGG 0.468859 2.2:-7179769 MS.gene074324:CDS
GGGATGTCCACGTTAAGCTT+AGG 0.468920 2.2:+7177103 None:intergenic
CCAACCGTTGATTTGGTACA+AGG 0.469575 2.2:-7176632 MS.gene074324:intron
GACTTCACGGGGATGGGAAA+AGG 0.474886 2.2:-7176448 MS.gene074324:CDS
GAACCCAAGATTACTTCTCT+TGG 0.475327 2.2:-7178371 MS.gene074324:CDS
ATGGCTACATCTCTTGATAC+AGG 0.477673 2.2:-7179361 MS.gene074324:CDS
GTAGCAAAAGCTATTTGTGT+TGG 0.477984 2.2:+7176112 None:intergenic
TCTTATTGACAGGCCTGCAT+TGG 0.480214 2.2:-7175360 MS.gene074324:intron
GGAGACATCGATTCAGCCTA+TGG 0.480983 2.2:-7179421 MS.gene074324:CDS
AAATTGTGTTGGTCATGCTT+TGG 0.481963 2.2:-7180670 MS.gene074324:CDS
ACCAACTTTGACCGAAGTAC+TGG 0.484159 2.2:-7178730 MS.gene074324:CDS
TTCCACAAGTCTATTTGAGG+TGG 0.485209 2.2:+7176046 None:intergenic
GGCGATGTCAATTGTAAAGA+AGG 0.486852 2.2:-7175870 MS.gene074324:intron
TTGATCTCTCCTCTCGGAAG+TGG 0.487529 2.2:-7176826 MS.gene074324:CDS
ATATTGAAAGGTTTGAAGAA+TGG 0.489802 2.2:-7176860 MS.gene074324:CDS
ATAAAACTTACGATTGGATC+AGG 0.490392 2.2:+7179304 None:intergenic
TGGGTAAATGGACAAAGCAT+TGG 0.493909 2.2:-7176418 MS.gene074324:CDS
GCAAGCTATGGAACACCACT+AGG 0.494447 2.2:-7175935 MS.gene074324:CDS
CTATATGTGCATCTCCGTAT+TGG 0.495851 2.2:-7179907 MS.gene074324:CDS
GGATGGGAAAAGGTGAGGCT+TGG 0.496077 2.2:-7176438 MS.gene074324:CDS
CTTGTATTGTTTGAGGAAAG+TGG 0.502872 2.2:-7176142 MS.gene074324:CDS
ATTCATATCACTTGCCTGCA+TGG 0.503989 2.2:-7178030 MS.gene074324:CDS
GGGTAAATGGACAAAGCATT+GGG 0.505117 2.2:-7176417 MS.gene074324:CDS
ACATTGGTGCAAAACATTGT+TGG 0.505134 2.2:+7180641 None:intergenic
ACAAACTTTGATGCTCCATC+CGG 0.506118 2.2:-7176490 MS.gene074324:CDS
TTTGAAATGTACCGCCTCGT+TGG 0.514090 2.2:+7178900 None:intergenic
GATAAAATTGTAAATTTCAG+TGG 0.515423 2.2:-7178055 MS.gene074324:CDS
TGGTAAATCATACATCAATT+GGG 0.516725 2.2:-7179392 MS.gene074324:CDS
GTGAAAGCAGTGGCTGAGGC+AGG 0.519491 2.2:-7179931 MS.gene074324:CDS
ATGTAAGTTCCAGAAAACAT+AGG 0.522734 2.2:+7180390 None:intergenic
GATTCAGCCTATGGTTCTGC+TGG 0.524874 2.2:-7179412 MS.gene074324:CDS
AATTATTAGGCAGCCGAAGT+GGG 0.527035 2.2:-7178453 MS.gene074324:CDS
TTCCGTTTATGAAAGCATGA+AGG 0.527618 2.2:+7177411 None:intergenic
CTCTCGGAAGTGGACATACC+AGG 0.527776 2.2:-7176816 MS.gene074324:intron
CTTATTCAGAAATCTAAAGA+TGG 0.530946 2.2:-7180433 MS.gene074324:CDS
CATGAGATCAACAATCTTAG+CGG 0.532181 2.2:+7179616 None:intergenic
TCAGTTCGGAACTTAATCCC+TGG 0.533302 2.2:+7179752 None:intergenic
GTTGCATGAGTCTGTGCAAT+CGG 0.533957 2.2:+7176363 None:intergenic
ACCAAATGTCACATGAATTG+TGG 0.534217 2.2:-7176319 MS.gene074324:CDS
GCCAGTACTTCGGTCAAAGT+TGG 0.534915 2.2:+7178729 None:intergenic
CCAGTTGCGATTGACTTCAC+GGG 0.536094 2.2:-7176460 MS.gene074324:CDS
ACATGAACCTGTTAAAGGCC+AGG 0.536626 2.2:-7180371 MS.gene074324:intron
GAATTATTAGGCAGCCGAAG+TGG 0.536927 2.2:-7178454 MS.gene074324:CDS
GGATCAAGAAGTTGTAGTGT+TGG 0.537164 2.2:-7175339 MS.gene074324:CDS
GCATTTGAAGCAACATATGT+AGG 0.542208 2.2:+7176385 None:intergenic
CCTTGTACCAAATCAACGGT+TGG 0.544937 2.2:+7176632 None:intergenic
GTTGATCTTAAGGATGATCC+TGG 0.545273 2.2:-7177473 MS.gene074324:CDS
CAGGCGGCAGTTTATAAGAC+AGG 0.545447 2.2:-7178121 MS.gene074324:CDS
ATCGGTCCAGTGATATTGAA+AGG 0.547749 2.2:-7176872 MS.gene074324:CDS
TGAAGGACAGTTTGAGAACC+AGG 0.551200 2.2:+7177455 None:intergenic
TCCGTTTATGAAAGCATGAA+GGG 0.551369 2.2:+7177412 None:intergenic
CTAGTGGAAATTCCGGAGGA+TGG 0.556179 2.2:-7176681 MS.gene074324:CDS
TGATTTACCAGCAGAACCAT+AGG 0.557167 2.2:+7179405 None:intergenic
GTTTGTGCTGAATGGAACTA+CGG 0.558163 2.2:-7179877 MS.gene074324:CDS
GGTCAAAGTTGGTTCCTCCA+TGG 0.559035 2.2:+7178740 None:intergenic
TGAAAGGTCCGCCAGTACTT+CGG 0.559349 2.2:+7178719 None:intergenic
ATGAAGATTAATACCTGCAA+TGG 0.560132 2.2:-7179159 MS.gene074324:intron
CTACCCTCGTAGTACTCCAC+AGG 0.568332 2.2:-7180552 MS.gene074324:intron
AGACTGTGAATTCCATCCTC+CGG 0.568524 2.2:+7176669 None:intergenic
CACAAACATATGGACCAATA+CGG 0.573068 2.2:+7179893 None:intergenic
AATCGCAACTGGATTACTGC+CGG 0.573419 2.2:+7176471 None:intergenic
TATTGCTTCTGCAGCGTCCG+TGG 0.577381 2.2:+7175894 None:intergenic
ACCCACCTCAAATAGACTTG+TGG 0.578788 2.2:-7176048 MS.gene074324:CDS
AGAACCTGTGGGTATTTCGA+AGG 0.582315 2.2:-7177666 MS.gene074324:CDS
ACATGCGGAAACTTCTACCA+CGG 0.584028 2.2:-7175911 MS.gene074324:CDS
TGTAGTGCTTAATACTGCAA+AGG 0.584106 2.2:-7177978 MS.gene074324:intron
GGACAGTTGAGCAACAGTGC+AGG 0.584213 2.2:+7175992 None:intergenic
TCCACAAGTCTATTTGAGGT+GGG 0.588450 2.2:+7176047 None:intergenic
TCTTTAAGATGACCCCACTT+CGG 0.589909 2.2:+7178440 None:intergenic
ATTACCTTGTACCAAATCAA+CGG 0.590007 2.2:+7176628 None:intergenic
AATTCTTAGGGAGTCAAACC+GGG 0.592065 2.2:-7177138 MS.gene074324:intron
TTATGAAAGCATGAAGGGCA+TGG 0.592259 2.2:+7177417 None:intergenic
ACAACTTCTTGATCCAATGC+AGG 0.595751 2.2:+7175347 None:intergenic
GGCCAAGCGATTCAATGTGA+AGG 0.596679 2.2:+7177438 None:intergenic
TGGTGCAAAACATTGTTGGT+AGG 0.600577 2.2:+7180645 None:intergenic
GCTCATTGATGGTAAACGTA+GGG 0.600739 2.2:-7180597 MS.gene074324:CDS
ACACTCTTGATCTCTCCTCT+CGG 0.601381 2.2:-7176832 MS.gene074324:CDS
GATCTGCTGAGTTTAACAGT+TGG 0.607244 2.2:-7177049 MS.gene074324:CDS
ATTTGTGAAAGCAGTGGCTG+AGG 0.607383 2.2:-7179935 MS.gene074324:CDS
CACGGGGATGGGAAAAGGTG+AGG 0.608159 2.2:-7176443 MS.gene074324:CDS
AACACTTACAATGTCTGTGA+TGG 0.608501 2.2:+7176292 None:intergenic
ATTCAGAAATCTAAAGATGG+AGG 0.610249 2.2:-7180430 MS.gene074324:CDS
CTCTCTAGTGGAAATTCCGG+AGG 0.610446 2.2:-7176685 MS.gene074324:CDS
GAAGATTTAGGTCTCTCTAG+TGG 0.612338 2.2:-7176697 MS.gene074324:CDS
GAGAGCCACTAAAATTGTGT+TGG 0.616101 2.2:-7180681 MS.gene074324:CDS
CTGATAGAAGTGACTACTTG+TGG 0.616428 2.2:-7177595 MS.gene074324:CDS
GGAATGAAGTGAAGCCAAAG+AGG 0.616620 2.2:+7179773 None:intergenic
TGGGTTTCCTCACAGACCTG+TGG 0.617107 2.2:-7178954 MS.gene074324:CDS
GGAACCAAGATACAGAATCA+GGG 0.617716 2.2:-7176027 MS.gene074324:CDS
ACATTTGGAGACCCTTGTAG+AGG 0.618423 2.2:-7175303 MS.gene074324:CDS
GAGTTGGATAAAAGAACCTG+TGG 0.619603 2.2:-7177678 MS.gene074324:CDS
TCATAACTAGTAGCAATGAA+AGG 0.623405 2.2:+7178703 None:intergenic
GCAACTGGATTACTGCCGGA+TGG 0.623513 2.2:+7176475 None:intergenic
GAATGAAGTGAAGCCAAAGA+GGG 0.625466 2.2:+7179774 None:intergenic
AACTTTGACCGAAGTACTGG+CGG 0.630915 2.2:-7178727 MS.gene074324:CDS
GAAAATGCAAGATCTTCCAC+AGG 0.635415 2.2:+7178938 None:intergenic
TTCTCTTGGTCAAAACCTAG+AGG 0.639100 2.2:-7178357 MS.gene074324:intron
CAGTTGCGATTGACTTCACG+GGG 0.639490 2.2:-7176459 MS.gene074324:CDS
GGACTGAAAATTGGAGTGCA+TGG 0.640312 2.2:-7179086 MS.gene074324:intron
ATTATTAGGCAGCCGAAGTG+GGG 0.644195 2.2:-7178452 MS.gene074324:CDS
TTTGTGCTGAATGGAACTAC+GGG 0.645930 2.2:-7179876 MS.gene074324:intron
AAGATGCTCACAGACCATGC+AGG 0.646255 2.2:+7178016 None:intergenic
GCTTGCTGACACATGACCCA+AGG 0.647657 2.2:+7179334 None:intergenic
CAAGCTATGGAACACCACTA+GGG 0.651106 2.2:-7175934 MS.gene074324:CDS
AAGTTTCCGCATGTCCCTAG+TGG 0.652981 2.2:+7175920 None:intergenic
GAACCAAGATACAGAATCAG+GGG 0.654289 2.2:-7176026 MS.gene074324:CDS
TCTATGATCATAATCCACAT+TGG 0.654567 2.2:+7180625 None:intergenic
TGCTCATTGATGGTAAACGT+AGG 0.663868 2.2:-7180598 MS.gene074324:CDS
GGAACACCACTAGGGACATG+CGG 0.667083 2.2:-7175926 MS.gene074324:CDS
GGTGAAATTTGTGAAAGCAG+TGG 0.671103 2.2:-7179941 MS.gene074324:CDS
GAGAAATTGTATGCATCACA+AGG 0.671326 2.2:-7179587 MS.gene074324:CDS
ACATCCTTCGAAATACCCAC+AGG 0.672748 2.2:+7177662 None:intergenic
AGATCTTCCACAGGTCTGTG+AGG 0.685878 2.2:+7178947 None:intergenic
TGCTGCCTTTCTCTCCAACG+TGG 0.688455 2.2:-7178089 MS.gene074324:CDS
TCATCTTAAAGATTTGCACA+AGG 0.698045 2.2:-7178429 MS.gene074324:CDS
AGTTGGATAAAAGAACCTGT+GGG 0.700880 2.2:-7177677 MS.gene074324:CDS
ACAGACTCATGCAACTACAG+AGG 0.715275 2.2:-7176355 MS.gene074324:CDS
AGACAAACCTAAGCTTAACG+TGG 0.720793 2.2:-7177110 MS.gene074324:CDS
TCTTTGGCACTCCTCTACAA+GGG 0.721168 2.2:+7175292 None:intergenic
GTATTGTTTGAGGAAAGTGG+TGG 0.725658 2.2:-7176139 MS.gene074324:CDS
AAATTGTATGCATCACAAGG+AGG 0.727012 2.2:-7179584 MS.gene074324:CDS
AAACCTGTGGAGTACTACGA+GGG 0.734720 2.2:+7180549 None:intergenic
CTGGTATGTCCACTTCCGAG+AGG 0.737350 2.2:+7176817 None:intergenic
AAAACCTGTGGAGTACTACG+AGG 0.746145 2.2:+7180548 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATTGATGAATTCTTA+GGG - chr2.2:7178778-7178797 MS.gene074324:intron 15.0%
!! TACATTTCAAAATTACTATA+TGG - chr2.2:7177040-7177059 MS.gene074324:intron 15.0%
!! TATTTAATGATAAAAAACCT+GGG + chr2.2:7176384-7176403 None:intergenic 15.0%
!!! AATTTATGTGTATATTTTTC+TGG - chr2.2:7176086-7176105 MS.gene074324:CDS 15.0%
!!! ATTTATGTGTATATTTTTCT+GGG - chr2.2:7176087-7176106 MS.gene074324:CDS 15.0%
!!! CAATAAATTATGAACATTTT+TGG + chr2.2:7178716-7178735 None:intergenic 15.0%
!!! GTTAATTGTTTTTTAGTTTA+TGG - chr2.2:7176663-7176682 MS.gene074324:CDS 15.0%
!!! TTTATTGTTTTTTATAGATG+TGG - chr2.2:7175466-7175485 MS.gene074324:intron 15.0%
!! AACAATAGATTTCAGTATTA+AGG + chr2.2:7177292-7177311 None:intergenic 20.0%
!! ACTAAAATTATCTTATTGAC+AGG - chr2.2:7180558-7180577 MS.gene074324:CDS 20.0%
!! ATATGTTTCATTATCTATCT+TGG + chr2.2:7175767-7175786 None:intergenic 20.0%
!! GATAAAATTGTAAATTTCAG+TGG - chr2.2:7177873-7177892 MS.gene074324:intron 20.0%
!! GATATTATTGATGAATTCTT+AGG - chr2.2:7178777-7178796 MS.gene074324:intron 20.0%
!! GTATTTAATGATAAAAAACC+TGG + chr2.2:7176385-7176404 None:intergenic 20.0%
!! TAAAAATATGAGATTGATCA+TGG - chr2.2:7178650-7178669 MS.gene074324:intron 20.0%
!! TAATGAAGATACATTGTTAA+TGG - chr2.2:7179173-7179192 MS.gene074324:intron 20.0%
!!! AAATTATGAACATTTTTGGA+CGG + chr2.2:7178712-7178731 None:intergenic 20.0%
!!! AATTATTCACTAGGATTTTA+TGG - chr2.2:7178551-7178570 MS.gene074324:intron 20.0%
!!! AGTTAGGGAATTTTAAATTA+AGG - chr2.2:7179355-7179374 MS.gene074324:CDS 20.0%
!!! GTTAGGGAATTTTAAATTAA+GGG - chr2.2:7179356-7179375 MS.gene074324:CDS 20.0%
!!! TAATTTGTTATGTTTCACTT+TGG - chr2.2:7180108-7180127 MS.gene074324:intron 20.0%
!!! TTTATGTGTATATTTTTCTG+GGG - chr2.2:7176088-7176107 MS.gene074324:CDS 20.0%
!!! TTTTGTAACTAAAATTCATC+TGG - chr2.2:7177663-7177682 MS.gene074324:CDS 20.0%
!!! TTTTTAGTTTATGGTTTACT+AGG - chr2.2:7176672-7176691 MS.gene074324:CDS 20.0%
! AAAACCTGGGATAAAATTAT+AGG + chr2.2:7176371-7176390 None:intergenic 25.0%
! AAAATATCTTTCAAACTTGG+AGG + chr2.2:7178379-7178398 None:intergenic 25.0%
! AAATTCCCTAACTTATATCA+AGG + chr2.2:7179348-7179367 None:intergenic 25.0%
! AAGCAACTTAACATAAATGA+AGG + chr2.2:7177985-7178004 None:intergenic 25.0%
! AATTCCCTAACTTATATCAA+GGG + chr2.2:7179347-7179366 None:intergenic 25.0%
! ATATTGAAAGGTTTGAAGAA+TGG - chr2.2:7179068-7179087 MS.gene074324:intron 25.0%
! CAAAACATAAAACTTACGAT+TGG + chr2.2:7176633-7176652 None:intergenic 25.0%
! CATCTTTAGATTTCTGAATA+AGG + chr2.2:7175497-7175516 None:intergenic 25.0%
! CTTAACTCATTGAAATGAAA+TGG - chr2.2:7175928-7175947 MS.gene074324:CDS 25.0%
! CTTATTCAGAAATCTAAAGA+TGG - chr2.2:7175495-7175514 MS.gene074324:intron 25.0%
! GAAACATAACAAATTAGCAA+GGG + chr2.2:7180104-7180123 None:intergenic 25.0%
! GATTAACCTATCTATAAACA+GGG - chr2.2:7178086-7178105 MS.gene074324:CDS 25.0%
! TAAAGTAGTTTATCCAAACA+TGG - chr2.2:7175874-7175893 MS.gene074324:CDS 25.0%
! TAAGCTATTCTATGCATAAT+TGG + chr2.2:7178937-7178956 None:intergenic 25.0%
! TATATGATAGTAGTACTTCA+GGG - chr2.2:7177099-7177118 MS.gene074324:CDS 25.0%
! TGAAACATAACAAATTAGCA+AGG + chr2.2:7180105-7180124 None:intergenic 25.0%
! TGATTAACCTATCTATAAAC+AGG - chr2.2:7178085-7178104 MS.gene074324:CDS 25.0%
! TGGTAAATCATACATCAATT+GGG - chr2.2:7176536-7176555 MS.gene074324:intron 25.0%
! TTATATGATAGTAGTACTTC+AGG - chr2.2:7177098-7177117 MS.gene074324:CDS 25.0%
! TTATTACATTCTACTTACCT+TGG + chr2.2:7178133-7178152 None:intergenic 25.0%
!! AACAAACATTTTTCATACAG+TGG + chr2.2:7179386-7179405 None:intergenic 25.0%
!! AATGGTAGGTATCTTTTATT+TGG - chr2.2:7176948-7176967 MS.gene074324:intron 25.0%
!! GATGTTGTATTTTCAAAAAC+TGG - chr2.2:7178284-7178303 MS.gene074324:intron 25.0%
!! TAAGATTTGATAACAGAGTT+TGG + chr2.2:7180326-7180345 None:intergenic 25.0%
!! TTTTCTATTGTTCAAGCATA+GGG + chr2.2:7180261-7180280 None:intergenic 25.0%
!! TTTTTGCAGTATGATTTTGA+TGG - chr2.2:7175952-7175971 MS.gene074324:CDS 25.0%
!!! TAGAAACTTCTAGTTCAAAA+TGG - chr2.2:7178228-7178247 MS.gene074324:intron 25.0%
!!! TCATGGACTTTTATTTTTCA+AGG - chr2.2:7178667-7178686 MS.gene074324:intron 25.0%
!!! TTTTGCAGTATGATTTTGAT+GGG - chr2.2:7175953-7175972 MS.gene074324:CDS 25.0%
AACTGACAATGAACCATTTA+AGG - chr2.2:7176193-7176212 MS.gene074324:intron 30.0%
AACTTACATGAACCTGTTAA+AGG - chr2.2:7175552-7175571 MS.gene074324:intron 30.0%
AACTTCGTATCTGAAGATAT+CGG - chr2.2:7178200-7178219 MS.gene074324:intron 30.0%
AATGCAATGCTCAAAGAAAA+TGG + chr2.2:7175617-7175636 None:intergenic 30.0%
ACAGTAATGAGAGAAATCAT+TGG + chr2.2:7178965-7178984 None:intergenic 30.0%
AGTCTTTCTAAGCTTATAGT+AGG + chr2.2:7175906-7175925 None:intergenic 30.0%
ATAAAACTTACGATTGGATC+AGG + chr2.2:7176627-7176646 None:intergenic 30.0%
ATCTTGTAAGTTTCTTTCTC+TGG - chr2.2:7177693-7177712 MS.gene074324:CDS 30.0%
ATGAAGATTAATACCTGCAA+TGG - chr2.2:7176769-7176788 MS.gene074324:intron 30.0%
ATGTAAGTTCCAGAAAACAT+AGG + chr2.2:7175541-7175560 None:intergenic 30.0%
ATGTAGAAGAGAAATTACAC+AGG - chr2.2:7177397-7177416 MS.gene074324:intron 30.0%
ATTACCTTGTACCAAATCAA+CGG + chr2.2:7179303-7179322 None:intergenic 30.0%
ATTCAGAAATCTAAAGATGG+AGG - chr2.2:7175498-7175517 MS.gene074324:intron 30.0%
CAAATCTTACTTGAATTCCT+TGG - chr2.2:7176925-7176944 MS.gene074324:intron 30.0%
CAAGGAATTCAAGTAAGATT+TGG + chr2.2:7176927-7176946 None:intergenic 30.0%
CTAAAACAAAGCCAAAAATG+TGG - chr2.2:7176821-7176840 MS.gene074324:CDS 30.0%
CTGGTAAATCATACATCAAT+TGG - chr2.2:7176535-7176554 MS.gene074324:intron 30.0%
GAGATTACCTGATTATGATT+AGG + chr2.2:7179960-7179979 None:intergenic 30.0%
GATTTCAGTATTAAGGTTGA+AGG + chr2.2:7177285-7177304 None:intergenic 30.0%
GCGAAATAAGATGTTTCAAA+CGG + chr2.2:7177625-7177644 None:intergenic 30.0%
GCTTTCAACAATTAGCAATT+CGG + chr2.2:7175688-7175707 None:intergenic 30.0%
GGGAAAATATCTTTCAAACT+TGG + chr2.2:7178382-7178401 None:intergenic 30.0%
GTTTCCCTTGATATAAGTTA+GGG - chr2.2:7179340-7179359 MS.gene074324:CDS 30.0%
TAAATGGTTCATTGTCAGTT+CGG + chr2.2:7176193-7176212 None:intergenic 30.0%
TAGTTTACTGATATGTGAGT+AGG - chr2.2:7180160-7180179 MS.gene074324:intron 30.0%
TATATGCTGCAGGAATTATT+AGG - chr2.2:7177462-7177481 MS.gene074324:CDS 30.0%
TCATAACTAGTAGCAATGAA+AGG + chr2.2:7177228-7177247 None:intergenic 30.0%
TCATCTTAAAGATTTGCACA+AGG - chr2.2:7177499-7177518 MS.gene074324:intron 30.0%
TCCATTAAATTTGCAAGCTA+TGG - chr2.2:7179981-7180000 MS.gene074324:intron 30.0%
TCTATGATCATAATCCACAT+TGG + chr2.2:7175306-7175325 None:intergenic 30.0%
TGTAGGGACATTTGATATAT+TGG + chr2.2:7180439-7180458 None:intergenic 30.0%
TGTTTCCCTTGATATAAGTT+AGG - chr2.2:7179339-7179358 MS.gene074324:CDS 30.0%
TTAGATTTCTGAATAAGGTC+TGG + chr2.2:7175492-7175511 None:intergenic 30.0%
TTAGTATGTTACAACAACTC+TGG + chr2.2:7180543-7180562 None:intergenic 30.0%
TTCAAACCTTTCAATATCAC+TGG + chr2.2:7179065-7179084 None:intergenic 30.0%
TTCCAGAAATTACTGTGATT+GGG + chr2.2:7178848-7178867 None:intergenic 30.0%
TTTCCAGAAATTACTGTGAT+TGG + chr2.2:7178849-7178868 None:intergenic 30.0%
! AACATCTTATTTCGCATCTT+AGG - chr2.2:7177630-7177649 MS.gene074324:CDS 30.0%
! ACAATGAACCATTTAAGGTA+AGG - chr2.2:7176198-7176217 MS.gene074324:intron 30.0%
! ATACTAAGATTGCTCTTTTC+CGG + chr2.2:7176709-7176728 None:intergenic 30.0%
! CAAAAATGTGGACTGAAAAT+TGG - chr2.2:7176833-7176852 MS.gene074324:CDS 30.0%
! CAATTTTCAGTCCACATTTT+TGG + chr2.2:7176835-7176854 None:intergenic 30.0%
! CATTTGAGTTTCAATAACAC+AGG + chr2.2:7178604-7178623 None:intergenic 30.0%
! GTTTTCTATTGTTCAAGCAT+AGG + chr2.2:7180262-7180281 None:intergenic 30.0%
! TCATTGAAACCTATGTTTTC+TGG - chr2.2:7175529-7175548 MS.gene074324:intron 30.0%
! TCCATAGCTTGCAAATTTAA+TGG + chr2.2:7179985-7180004 None:intergenic 30.0%
! TCTTTTACTATTTAAACCGC+AGG - chr2.2:7177788-7177807 MS.gene074324:intron 30.0%
! TGCTCTTATTTATTAGTCCA+AGG - chr2.2:7178113-7178132 MS.gene074324:CDS 30.0%
! TTAACTCTTTTGATACAGGT+CGG - chr2.2:7179198-7179217 MS.gene074324:intron 30.0%
!! TGACATTTGGTTTGAGTAAA+AGG + chr2.2:7179600-7179619 None:intergenic 30.0%
!! TTGTAAAGAAGGTGTTTATC+TGG - chr2.2:7180069-7180088 MS.gene074324:intron 30.0%
!!! CAAATCTTAGTTTTTTCCGT+TGG - chr2.2:7180337-7180356 MS.gene074324:intron 30.0%
!!! TTTGGCTTTGTTTTAGAGTT+TGG + chr2.2:7176817-7176836 None:intergenic 30.0%
!!! TTTTTCCGTTGGTTTTAAAG+TGG - chr2.2:7180348-7180367 MS.gene074324:intron 30.0%
AAAAGATACCTACCATTCCA+AGG + chr2.2:7176945-7176964 None:intergenic 35.0%
AAAGCATGACTCAACAAGTT+TGG - chr2.2:7175703-7175722 MS.gene074324:intron 35.0%
AAATTGTATGCATCACAAGG+AGG - chr2.2:7176344-7176363 MS.gene074324:CDS 35.0%
AACACTTACAATGTCTGTGA+TGG + chr2.2:7179639-7179658 None:intergenic 35.0%
ACATTGGTGCAAAACATTGT+TGG + chr2.2:7175290-7175309 None:intergenic 35.0%
ACCAAATGTCACATGAATTG+TGG - chr2.2:7179609-7179628 MS.gene074324:CDS 35.0%
ACTACTTGTGGTACTCATTA+AGG - chr2.2:7178345-7178364 MS.gene074324:intron 35.0%
AGTTGGATAAAAGAACCTGT+GGG - chr2.2:7178251-7178270 MS.gene074324:intron 35.0%
ATCCCAATCACAGTAATTTC+TGG - chr2.2:7178843-7178862 MS.gene074324:intron 35.0%
CAAACACCCTGTTTATAGAT+AGG + chr2.2:7178095-7178114 None:intergenic 35.0%
CAACACTCTTGTATTGTTTG+AGG - chr2.2:7179779-7179798 MS.gene074324:CDS 35.0%
CAACTGTCCTAATCATAATC+AGG - chr2.2:7179950-7179969 MS.gene074324:CDS 35.0%
CACAAACATATGGACCAATA+CGG + chr2.2:7176038-7176057 None:intergenic 35.0%
CATGAGATCAACAATCTTAG+CGG + chr2.2:7176315-7176334 None:intergenic 35.0%
CTTACTTGAATTCCTTGGAA+TGG - chr2.2:7176930-7176949 MS.gene074324:intron 35.0%
CTTGCAGGTAATTATTCACT+AGG - chr2.2:7178542-7178561 MS.gene074324:intron 35.0%
CTTGTATTGTTTGAGGAAAG+TGG - chr2.2:7179786-7179805 MS.gene074324:intron 35.0%
GAAATTAAGCAAAGAGAACC+TGG + chr2.2:7175578-7175597 None:intergenic 35.0%
GAACTTGTGAACAACATTTC+AGG + chr2.2:7177074-7177093 None:intergenic 35.0%
GAGAAATTGTATGCATCACA+AGG - chr2.2:7176341-7176360 MS.gene074324:CDS 35.0%
GGGTATTCATGTCTAATTGA+GGG - chr2.2:7176108-7176127 MS.gene074324:CDS 35.0%
GTAATGAGAGAAATCATTGG+AGG + chr2.2:7178962-7178981 None:intergenic 35.0%
GTAGCAAAAGCTATTTGTGT+TGG + chr2.2:7179819-7179838 None:intergenic 35.0%
GTAGTACTTCAGGGAAAAAT+TGG - chr2.2:7177108-7177127 MS.gene074324:CDS 35.0%
GTCATACCATACTCATCAAT+TGG + chr2.2:7177261-7177280 None:intergenic 35.0%
TAACAAATTAGCAAGGGAAC+AGG + chr2.2:7180098-7180117 None:intergenic 35.0%
TAATGCAACATGTGTCACAT+CGG + chr2.2:7179417-7179436 None:intergenic 35.0%
TACCAGTGTTGTATTTGTGA+CGG + chr2.2:7177325-7177344 None:intergenic 35.0%
TACCGTCTAAGTTGTACTTA+CGG - chr2.2:7180465-7180484 MS.gene074324:intron 35.0%
TATAAACCACCTATACCTCT+AGG + chr2.2:7177589-7177608 None:intergenic 35.0%
TCATATGCACATCAGAACTA+TGG - chr2.2:7179002-7179021 MS.gene074324:intron 35.0%
TCCACAATTCATGTGACATT+TGG + chr2.2:7179613-7179632 None:intergenic 35.0%
TGACCAAGAGAAGTAATCTT+GGG + chr2.2:7177563-7177582 None:intergenic 35.0%
TGCCAGATTGAAAATGAGTA+TGG - chr2.2:7176486-7176505 MS.gene074324:CDS 35.0%
TGCTTCTTCACAAAGCTTTA+TGG + chr2.2:7177525-7177544 None:intergenic 35.0%
TGGTTTAGATCGACTATGTT+GGG - chr2.2:7180128-7180147 MS.gene074324:intron 35.0%
TGTAGTGCTTAATACTGCAA+AGG - chr2.2:7177950-7177969 MS.gene074324:intron 35.0%
TTCCATTCAGCACAAACATA+TGG + chr2.2:7176048-7176067 None:intergenic 35.0%
TTGAAACTCAAATGAAGTCG+AGG - chr2.2:7178610-7178629 MS.gene074324:intron 35.0%
TTGACCAAGAGAAGTAATCT+TGG + chr2.2:7177564-7177583 None:intergenic 35.0%
TTGGTTTAGATCGACTATGT+TGG - chr2.2:7180127-7180146 MS.gene074324:intron 35.0%
TTTACTATTTAAACCGCAGG+CGG - chr2.2:7177791-7177810 MS.gene074324:intron 35.0%
TTTGTAGACGTAGACACAAT+TGG - chr2.2:7180300-7180319 MS.gene074324:intron 35.0%
! AAATCAACGGTTGGTTCTTA+GGG + chr2.2:7179290-7179309 None:intergenic 35.0%
! AAATTGTGTTGGTCATGCTT+TGG - chr2.2:7175258-7175277 MS.gene074324:CDS 35.0%
! AACAATGTTTTGCACCAATG+TGG - chr2.2:7175289-7175308 MS.gene074324:CDS 35.0%
! AGGACCTATAATTTTATCCC+AGG - chr2.2:7176364-7176383 MS.gene074324:CDS 35.0%
! ATATCTTTGCTATATGCTGC+AGG - chr2.2:7177452-7177471 MS.gene074324:CDS 35.0%
! ATCGAGAAGTACAGAATCAT+CGG + chr2.2:7178408-7178427 None:intergenic 35.0%
! CATGACCAACACAATTTTAG+TGG + chr2.2:7175255-7175274 None:intergenic 35.0%
! CTCCATACTCATTTTCAATC+TGG + chr2.2:7176491-7176510 None:intergenic 35.0%
! GACCTAAATCTTCACCTTTT+AGG + chr2.2:7179224-7179243 None:intergenic 35.0%
! GGAGTATCAACTGATACATT+TGG - chr2.2:7180610-7180629 MS.gene074324:CDS 35.0%
! GGAGTTAACTCTTTTGATAC+AGG - chr2.2:7179194-7179213 MS.gene074324:intron 35.0%
! TCCGTTTATGAAAGCATGAA+GGG + chr2.2:7178519-7178538 None:intergenic 35.0%
! TTCCGTTTATGAAAGCATGA+AGG + chr2.2:7178520-7178539 None:intergenic 35.0%
! TTCTTTCTCTGGAAAATTCC+CGG - chr2.2:7177704-7177723 MS.gene074324:CDS 35.0%
! TTTGGTTTCAAAAACGATCG+TGG + chr2.2:7179756-7179775 None:intergenic 35.0%
!! AATACAAGAGTGTTGTCGTT+TGG + chr2.2:7179774-7179793 None:intergenic 35.0%
!! AGGTATCTTTTATTTGGTGG+TGG - chr2.2:7176954-7176973 MS.gene074324:intron 35.0%
!! CTTCTAGTTCAAAATGGAGT+TGG - chr2.2:7178234-7178253 MS.gene074324:intron 35.0%
!! GCTAACCACTTTAAAACCAA+CGG + chr2.2:7180356-7180375 None:intergenic 35.0%
!! GGTAGGTATCTTTTATTTGG+TGG - chr2.2:7176951-7176970 MS.gene074324:intron 35.0%
!! GGTATCTTTTATTTGGTGGT+GGG - chr2.2:7176955-7176974 MS.gene074324:intron 35.0%
!! TTTTCAAGGAGAGTTCATCA+TGG - chr2.2:7178681-7178700 MS.gene074324:CDS 35.0%
!!! ATGGAGCTTTTTTTGACACA+TGG - chr2.2:7179021-7179040 MS.gene074324:intron 35.0%
!!! CTTTTGAAGCGTTGATCTTA+AGG - chr2.2:7178445-7178464 MS.gene074324:CDS 35.0%
!!! GTTGGTTTTAAAGTGGTTAG+CGG - chr2.2:7180355-7180374 MS.gene074324:intron 35.0%
!!! TGGAGCTTTTTTTGACACAT+GGG - chr2.2:7179022-7179041 MS.gene074324:intron 35.0%
AAACGTAGGGTCTTGATTTC+TGG - chr2.2:7175344-7175363 MS.gene074324:CDS 40.0%
AAAGAGAGACAGAAAACCTG+TGG + chr2.2:7175395-7175414 None:intergenic 40.0%
AAGTACAGAATCATCGGTCA+GGG + chr2.2:7178402-7178421 None:intergenic 40.0%
AATTATTAGGCAGCCGAAGT+GGG - chr2.2:7177475-7177494 MS.gene074324:CDS 40.0%
AATTCTTAGGGAGTCAAACC+GGG - chr2.2:7178790-7178809 MS.gene074324:intron 40.0%
ACAAACTTTGATGCTCCATC+CGG - chr2.2:7179438-7179457 MS.gene074324:CDS 40.0%
ACAACTTCTTGATCCAATGC+AGG + chr2.2:7180584-7180603 None:intergenic 40.0%
ACAGAATCAGGGGAAAAAGT+AGG - chr2.2:7179912-7179931 MS.gene074324:CDS 40.0%
ACCGTCTAAGTTGTACTTAC+GGG - chr2.2:7180466-7180485 MS.gene074324:intron 40.0%
AGACAAACCTAAGCTTAACG+TGG - chr2.2:7178818-7178837 MS.gene074324:intron 40.0%
AGCACTACATTCTTGCAATC+TGG + chr2.2:7177939-7177958 None:intergenic 40.0%
ATCGCAGTAAAATCCATTGC+AGG + chr2.2:7176785-7176804 None:intergenic 40.0%
ATCGGTCCAGTGATATTGAA+AGG - chr2.2:7179056-7179075 MS.gene074324:intron 40.0%
ATGGCTACATCTCTTGATAC+AGG - chr2.2:7176567-7176586 MS.gene074324:intron 40.0%
ATGTTGCCACAACCACTATT+TGG - chr2.2:7177738-7177757 MS.gene074324:CDS 40.0%
ATTCATATCACTTGCCTGCA+TGG - chr2.2:7177898-7177917 MS.gene074324:intron 40.0%
CAGAATCAGGGGAAAAAGTA+GGG - chr2.2:7179913-7179932 MS.gene074324:CDS 40.0%
CATCAATTGGGCAGCAAAAA+TGG - chr2.2:7176548-7176567 MS.gene074324:intron 40.0%
CATTTGATATATTGGAGCGC+AGG + chr2.2:7180431-7180450 None:intergenic 40.0%
CTATATGTGCATCTCCGTAT+TGG - chr2.2:7176021-7176040 MS.gene074324:CDS 40.0%
CTGATAGAAGTGACTACTTG+TGG - chr2.2:7178333-7178352 MS.gene074324:intron 40.0%
CTTAGGTTTGTCTTTGTTCC+CGG + chr2.2:7178811-7178830 None:intergenic 40.0%
CTTGAATTCCTTGGAATGGT+AGG - chr2.2:7176934-7176953 MS.gene074324:intron 40.0%
CTTGCTCAAAAACAGTACCA+TGG - chr2.2:7177171-7177190 MS.gene074324:intron 40.0%
GAAAATGCAAGATCTTCCAC+AGG + chr2.2:7176993-7177012 None:intergenic 40.0%
GAACCAAGATACAGAATCAG+GGG - chr2.2:7179902-7179921 MS.gene074324:CDS 40.0%
GAACCCAAGATTACTTCTCT+TGG - chr2.2:7177557-7177576 MS.gene074324:intron 40.0%
GAAGATTTAGGTCTCTCTAG+TGG - chr2.2:7179231-7179250 MS.gene074324:intron 40.0%
GAAGGTCACCTTACCTTAAA+TGG + chr2.2:7176209-7176228 None:intergenic 40.0%
GAATGAAGTGAAGCCAAAGA+GGG + chr2.2:7176157-7176176 None:intergenic 40.0%
GAATTCTTAGGGAGTCAAAC+CGG - chr2.2:7178789-7178808 MS.gene074324:intron 40.0%
GAGAGCCACTAAAATTGTGT+TGG - chr2.2:7175247-7175266 MS.gene074324:CDS 40.0%
GAGTTGGATAAAAGAACCTG+TGG - chr2.2:7178250-7178269 MS.gene074324:intron 40.0%
GAGTTTAACAGTTGGACTTC+AGG - chr2.2:7178887-7178906 MS.gene074324:intron 40.0%
GATCTGCTGAGTTTAACAGT+TGG - chr2.2:7178879-7178898 MS.gene074324:intron 40.0%
GATGCACCAATTGATGAGTA+TGG - chr2.2:7177252-7177271 MS.gene074324:intron 40.0%
GCCCTTCATGCTTTCATAAA+CGG - chr2.2:7178515-7178534 MS.gene074324:intron 40.0%
GCTTCAACAGCTAAACTCTT+TGG + chr2.2:7180655-7180674 None:intergenic 40.0%
GGAACCAAGATACAGAATCA+GGG - chr2.2:7179901-7179920 MS.gene074324:CDS 40.0%
GGATCAAGAAGTTGTAGTGT+TGG - chr2.2:7180589-7180608 MS.gene074324:CDS 40.0%
GGCAAGTGAACTCAGATTTA+AGG + chr2.2:7176255-7176274 None:intergenic 40.0%
GGCCTAAAAGGTGAAGATTT+AGG - chr2.2:7179219-7179238 MS.gene074324:intron 40.0%
GGCGATGTCAATTGTAAAGA+AGG - chr2.2:7180058-7180077 MS.gene074324:intron 40.0%
GGTGAAATTTGTGAAAGCAG+TGG - chr2.2:7175987-7176006 MS.gene074324:CDS 40.0%
GTACATGGTATCTGTGAGAT+GGG + chr2.2:7179734-7179753 None:intergenic 40.0%
GTATTGTTTGAGGAAAGTGG+TGG - chr2.2:7179789-7179808 MS.gene074324:intron 40.0%
GTCCATATGTTTGTGCTGAA+TGG - chr2.2:7176043-7176062 MS.gene074324:CDS 40.0%
GTTGATCTTAAGGATGATCC+TGG - chr2.2:7178455-7178474 MS.gene074324:CDS 40.0%
GTTTGTGCTGAATGGAACTA+CGG - chr2.2:7176051-7176070 MS.gene074324:CDS 40.0%
TAAATCTGAGTTCACTTGCC+AGG - chr2.2:7176255-7176274 MS.gene074324:intron 40.0%
TAGATCGACTATGTTGGGTA+TGG - chr2.2:7180133-7180152 MS.gene074324:intron 40.0%
TAGTAGGTCTAGACCATGTT+TGG + chr2.2:7175890-7175909 None:intergenic 40.0%
TCAAAAACGATCGTGGTACA+TGG + chr2.2:7179749-7179768 None:intergenic 40.0%
TCCCGTAAGTACAACTTAGA+CGG + chr2.2:7180470-7180489 None:intergenic 40.0%
TCTTGATACAGGTGTTCCTT+GGG - chr2.2:7176578-7176597 MS.gene074324:intron 40.0%
TGATTTACCAGCAGAACCAT+AGG + chr2.2:7176526-7176545 None:intergenic 40.0%
TGCATTTGTTCATTGCTTGC+AGG - chr2.2:7175636-7175655 MS.gene074324:intron 40.0%
TGGAACCAAGATACAGAATC+AGG - chr2.2:7179900-7179919 MS.gene074324:CDS 40.0%
TGGGTAAATGGACAAAGCAT+TGG - chr2.2:7179510-7179529 MS.gene074324:intron 40.0%
TGGTGCAAAACATTGTTGGT+AGG + chr2.2:7175286-7175305 None:intergenic 40.0%
TGGTTCCACAAGTCTATTTG+AGG + chr2.2:7179888-7179907 None:intergenic 40.0%
TGTTGCCACAACCACTATTT+GGG - chr2.2:7177739-7177758 MS.gene074324:CDS 40.0%
TTAGACGGTAAAACGCTGTA+GGG + chr2.2:7180455-7180474 None:intergenic 40.0%
TTCATAAACGGAAAGCTTGC+AGG - chr2.2:7178527-7178546 MS.gene074324:intron 40.0%
TTCCACAAGTCTATTTGAGG+TGG + chr2.2:7179885-7179904 None:intergenic 40.0%
TTCTCTTGGTCAAAACCTAG+AGG - chr2.2:7177571-7177590 MS.gene074324:intron 40.0%
TTTCCCCTGATTCTGTATCT+TGG + chr2.2:7179908-7179927 None:intergenic 40.0%
TTTGTGCTGAATGGAACTAC+GGG - chr2.2:7176052-7176071 MS.gene074324:CDS 40.0%
! ATCATTTTCAGTGTCCACGT+TGG + chr2.2:7177856-7177875 None:intergenic 40.0%
! CAAATCAACGGTTGGTTCTT+AGG + chr2.2:7179291-7179310 None:intergenic 40.0%
! CTAAGAACCAACCGTTGATT+TGG - chr2.2:7179289-7179308 MS.gene074324:intron 40.0%
! GACAAAAGCATGAAGCACTA+GGG + chr2.2:7176233-7176252 None:intergenic 40.0%
! GCTCATTGATGGTAAACGTA+GGG - chr2.2:7175331-7175350 MS.gene074324:CDS 40.0%
! GGGGTATTCATGTCTAATTG+AGG - chr2.2:7176107-7176126 MS.gene074324:CDS 40.0%
! GGGTAAATGGACAAAGCATT+GGG - chr2.2:7179511-7179530 MS.gene074324:intron 40.0%
! TCAAAACCTAGAGGTATAGG+TGG - chr2.2:7177580-7177599 MS.gene074324:intron 40.0%
! TCCACAAGTCTATTTGAGGT+GGG + chr2.2:7179884-7179903 None:intergenic 40.0%
! TGCTCATTGATGGTAAACGT+AGG - chr2.2:7175330-7175349 MS.gene074324:CDS 40.0%
! TGGTCAAAACCTAGAGGTAT+AGG - chr2.2:7177577-7177596 MS.gene074324:intron 40.0%
! TTATGAAAGCATGAAGGGCA+TGG + chr2.2:7178514-7178533 None:intergenic 40.0%
! TTTGGCTTCACTTCATTCCA+GGG - chr2.2:7176159-7176178 MS.gene074324:CDS 40.0%
! TTTGGGGCACTAACTAGATT+AGG - chr2.2:7177756-7177775 MS.gene074324:intron 40.0%
! TTTTGATGGGAGGAAGGATT+TGG - chr2.2:7175966-7175985 MS.gene074324:CDS 40.0%
!! AGGGAAAAATTGGCTCTAAG+AGG - chr2.2:7177118-7177137 MS.gene074324:CDS 40.0%
!! CATAGAGCATTGCTCATTGA+TGG - chr2.2:7175320-7175339 MS.gene074324:CDS 40.0%
!! GTATGATTTTGATGGGAGGA+AGG - chr2.2:7175960-7175979 MS.gene074324:CDS 40.0%
!! TCTTTAAGATGACCCCACTT+CGG + chr2.2:7177491-7177510 None:intergenic 40.0%
!! TGCAGTATGATTTTGATGGG+AGG - chr2.2:7175956-7175975 MS.gene074324:CDS 40.0%
!!! GGAGCTTTTTTTGACACATG+GGG - chr2.2:7179023-7179042 MS.gene074324:intron 40.0%
!!! TTTTTTTGACACATGGGGAG+CGG - chr2.2:7179028-7179047 MS.gene074324:intron 40.0%
AAAGGTGAGGCTTGGGTAAA+TGG - chr2.2:7179498-7179517 MS.gene074324:intron 45.0%
AATCGCAACTGGATTACTGC+CGG + chr2.2:7179460-7179479 None:intergenic 45.0%
ACACACTATGTGCAGAGAAG+TGG - chr2.2:7180388-7180407 MS.gene074324:CDS 45.0%
ACACTCTTGATCTCTCCTCT+CGG - chr2.2:7179096-7179115 MS.gene074324:CDS 45.0%
ACAGACTCATGCAACTACAG+AGG - chr2.2:7179573-7179592 MS.gene074324:CDS 45.0%
ACATCCTTCGAAATACCCAC+AGG + chr2.2:7178269-7178288 None:intergenic 45.0%
ACATGAACCTGTTAAAGGCC+AGG - chr2.2:7175557-7175576 MS.gene074324:intron 45.0%
ACATGCGGAAACTTCTACCA+CGG - chr2.2:7180017-7180036 MS.gene074324:intron 45.0%
ACATTTGGAGACCCTTGTAG+AGG - chr2.2:7180625-7180644 MS.gene074324:CDS 45.0%
ACCAACTTTGACCGAAGTAC+TGG - chr2.2:7177198-7177217 MS.gene074324:intron 45.0%
ACCCACCTCAAATAGACTTG+TGG - chr2.2:7179880-7179899 MS.gene074324:CDS 45.0%
AGAACCTGTGGGTATTTCGA+AGG - chr2.2:7178262-7178281 MS.gene074324:intron 45.0%
AGACTGTGAATTCCATCCTC+CGG + chr2.2:7179262-7179281 None:intergenic 45.0%
AGCCGTCACAAATACAACAC+TGG - chr2.2:7177320-7177339 MS.gene074324:intron 45.0%
AGCGGTGAATCGCTTCATTT+CGG + chr2.2:7176297-7176316 None:intergenic 45.0%
ATCAAAAGTGAAGACCGACC+TGG + chr2.2:7179133-7179152 None:intergenic 45.0%
ATTATTAGGCAGCCGAAGTG+GGG - chr2.2:7177476-7177495 MS.gene074324:CDS 45.0%
ATTTGTGAAAGCAGTGGCTG+AGG - chr2.2:7175993-7176012 MS.gene074324:CDS 45.0%
CAAATGCACAGTGGTTGTAG+TGG + chr2.2:7180284-7180303 None:intergenic 45.0%
CAAGCTATGGAACACCACTA+GGG - chr2.2:7179994-7180013 MS.gene074324:intron 45.0%
CCTTGTACCAAATCAACGGT+TGG + chr2.2:7179299-7179318 None:intergenic 45.0%
CTACGTCTACAAATGCACAG+TGG + chr2.2:7180293-7180312 None:intergenic 45.0%
CTAGTTAGTGCCCCAAATAG+TGG + chr2.2:7177753-7177772 None:intergenic 45.0%
CTCTTGATACAGGTGTTCCT+TGG - chr2.2:7176577-7176596 MS.gene074324:intron 45.0%
CTTAGACGGTAAAACGCTGT+AGG + chr2.2:7180456-7180475 None:intergenic 45.0%
GAAGTACAGAATCATCGGTC+AGG + chr2.2:7178403-7178422 None:intergenic 45.0%
GAATTATTAGGCAGCCGAAG+TGG - chr2.2:7177474-7177493 MS.gene074324:CDS 45.0%
GCAGAGAAGTGGAGAATTGT+AGG - chr2.2:7180399-7180418 MS.gene074324:CDS 45.0%
GCTCAAAAACAGTACCATGG+AGG - chr2.2:7177174-7177193 MS.gene074324:intron 45.0%
GGAATGAAGTGAAGCCAAAG+AGG + chr2.2:7176158-7176177 None:intergenic 45.0%
GGACTGAAAATTGGAGTGCA+TGG - chr2.2:7176842-7176861 MS.gene074324:CDS 45.0%
GGTACATGGTATCTGTGAGA+TGG + chr2.2:7179735-7179754 None:intergenic 45.0%
GGTCTCTCTAGTGGAAATTC+CGG - chr2.2:7179240-7179259 MS.gene074324:intron 45.0%
GTCCTTCACATTGAATCGCT+TGG - chr2.2:7178488-7178507 MS.gene074324:intron 45.0%
GTTGCATGAGTCTGTGCAAT+CGG + chr2.2:7179568-7179587 None:intergenic 45.0%
GTTGCCACAACCACTATTTG+GGG - chr2.2:7177740-7177759 MS.gene074324:CDS 45.0%
TCAGTTCGGAACTTAATCCC+TGG + chr2.2:7176179-7176198 None:intergenic 45.0%
TCTTATTGACAGGCCTGCAT+TGG - chr2.2:7180568-7180587 MS.gene074324:CDS 45.0%
TCTTTGGCACTCCTCTACAA+GGG + chr2.2:7180639-7180658 None:intergenic 45.0%
TGAAGGACAGTTTGAGAACC+AGG + chr2.2:7178476-7178495 None:intergenic 45.0%
TGCCAGGAAACTTTGTCTTC+AGG - chr2.2:7176271-7176290 MS.gene074324:intron 45.0%
TTACTAGGTTGCCTGTCTTC+CGG - chr2.2:7176687-7176706 MS.gene074324:CDS 45.0%
TTGACAGTGGTTTCCCTCTT+TGG - chr2.2:7176141-7176160 MS.gene074324:CDS 45.0%
TTGATACAGGTCGGCCTAAA+AGG - chr2.2:7179207-7179226 MS.gene074324:intron 45.0%
! AAAACCTGTGGAGTACTACG+AGG + chr2.2:7175383-7175402 None:intergenic 45.0%
! AAACCTGTGGAGTACTACGA+GGG + chr2.2:7175382-7175401 None:intergenic 45.0%
! AAGAGAACCTGGCCTTTAAC+AGG + chr2.2:7175567-7175586 None:intergenic 45.0%
! ATTGCTCTTTTCCGGAAGAC+AGG + chr2.2:7176701-7176720 None:intergenic 45.0%
! CTTTGGCTTCACTTCATTCC+AGG - chr2.2:7176158-7176177 MS.gene074324:CDS 45.0%
! GGACAAAAGCATGAAGCACT+AGG + chr2.2:7176234-7176253 None:intergenic 45.0%
! GGGCTTTAACTTCTTGACAG+TGG - chr2.2:7176128-7176147 MS.gene074324:CDS 45.0%
! TCCAGTTGCGATTGACTTCA+CGG - chr2.2:7179467-7179486 MS.gene074324:intron 45.0%
! TTTGAAATGTACCGCCTCGT+TGG + chr2.2:7177031-7177050 None:intergenic 45.0%
!! AACTTTGACCGAAGTACTGG+CGG - chr2.2:7177201-7177220 MS.gene074324:intron 45.0%
!! CCAACCGTTGATTTGGTACA+AGG - chr2.2:7179296-7179315 MS.gene074324:intron 45.0%
!!! TTTTTTGACACATGGGGAGC+GGG - chr2.2:7179029-7179048 MS.gene074324:intron 45.0%
!! TTAAATTATTTATACAAAAA+AGG + chr2.2:7176883-7176902 None:intergenic 5.0%
!!! TAAAAATAACATTTTTATTA+TGG - chr2.2:7178150-7178169 MS.gene074324:intron 5.0%
AAGATGCTCACAGACCATGC+AGG + chr2.2:7177915-7177934 None:intergenic 50.0%
AAGTTTCCGCATGTCCCTAG+TGG + chr2.2:7180011-7180030 None:intergenic 50.0%
AGATCTTCCACAGGTCTGTG+AGG + chr2.2:7176984-7177003 None:intergenic 50.0%
AGTGCCCCAAATAGTGGTTG+TGG + chr2.2:7177747-7177766 None:intergenic 50.0%
AGTGTCCACGTTGGAGAGAA+AGG + chr2.2:7177847-7177866 None:intergenic 50.0%
CAGGCGGCAGTTTATAAGAC+AGG - chr2.2:7177807-7177826 MS.gene074324:intron 50.0%
CTAGTGGAAATTCCGGAGGA+TGG - chr2.2:7179247-7179266 MS.gene074324:intron 50.0%
CTCTCTAGTGGAAATTCCGG+AGG - chr2.2:7179243-7179262 MS.gene074324:intron 50.0%
CTCTTTGGCACTCCTCTACA+AGG + chr2.2:7180640-7180659 None:intergenic 50.0%
GATGGGAAAAGGTGAGGCTT+GGG - chr2.2:7179491-7179510 MS.gene074324:intron 50.0%
GCAACATTGCACTCAATGCC+GGG + chr2.2:7177725-7177744 None:intergenic 50.0%
GCAAGCTATGGAACACCACT+AGG - chr2.2:7179993-7180012 MS.gene074324:intron 50.0%
GCCAGTACTTCGGTCAAAGT+TGG + chr2.2:7177202-7177221 None:intergenic 50.0%
GGCAACATTGCACTCAATGC+CGG + chr2.2:7177726-7177745 None:intergenic 50.0%
GGCCAAGCGATTCAATGTGA+AGG + chr2.2:7178493-7178512 None:intergenic 50.0%
GGCCTGAAGACAAAGTTTCC+TGG + chr2.2:7176276-7176295 None:intergenic 50.0%
GGGATGTCCACGTTAAGCTT+AGG + chr2.2:7178828-7178847 None:intergenic 50.0%
GTCTTATAAACTGCCGCCTG+CGG + chr2.2:7177807-7177826 None:intergenic 50.0%
TGAAAGGTCCGCCAGTACTT+CGG + chr2.2:7177212-7177231 None:intergenic 50.0%
TGTGAGTAGGTTGCTTGAGC+TGG - chr2.2:7180173-7180192 MS.gene074324:intron 50.0%
TTGATCTCTCCTCTCGGAAG+TGG - chr2.2:7179102-7179121 MS.gene074324:CDS 50.0%
! AGCATGAAGCACTAGGGTGA+AGG + chr2.2:7176227-7176246 None:intergenic 50.0%
! CAGTTGCGATTGACTTCACG+GGG - chr2.2:7179469-7179488 MS.gene074324:intron 50.0%
! CCAGTTGCGATTGACTTCAC+GGG - chr2.2:7179468-7179487 MS.gene074324:intron 50.0%
! GATTCAGCCTATGGTTCTGC+TGG - chr2.2:7176516-7176535 MS.gene074324:intron 50.0%
! GGTCAAAGTTGGTTCCTCCA+TGG + chr2.2:7177191-7177210 None:intergenic 50.0%
! TTTTTGACACATGGGGAGCG+GGG - chr2.2:7179030-7179049 MS.gene074324:intron 50.0%
!! GACAAAGCATTGGGCGATAC+TGG - chr2.2:7179520-7179539 MS.gene074324:intron 50.0%
!! GGAGACATCGATTCAGCCTA+TGG - chr2.2:7176507-7176526 MS.gene074324:intron 50.0%
!!! GTTGCACGCTTTTTCCAACG+AGG - chr2.2:7177014-7177033 MS.gene074324:intron 50.0%
CCCGTGAAGTCAATCGCAAC+TGG + chr2.2:7179471-7179490 None:intergenic 55.0%
CGGAAGTGGACATACCAGGT+CGG - chr2.2:7179116-7179135 MS.gene074324:CDS 55.0%
CGGACGCTGCAGAAGCAATA+AGG - chr2.2:7180037-7180056 MS.gene074324:intron 55.0%
CTACCCTCGTAGTACTCCAC+AGG - chr2.2:7175376-7175395 MS.gene074324:intron 55.0%
CTCTCGGAAGTGGACATACC+AGG - chr2.2:7179112-7179131 MS.gene074324:CDS 55.0%
CTGGTATGTCCACTTCCGAG+AGG + chr2.2:7179114-7179133 None:intergenic 55.0%
GACTTCACGGGGATGGGAAA+AGG - chr2.2:7179480-7179499 MS.gene074324:intron 55.0%
GCAACTGGATTACTGCCGGA+TGG + chr2.2:7179456-7179475 None:intergenic 55.0%
GGAACACCACTAGGGACATG+CGG - chr2.2:7180002-7180021 MS.gene074324:intron 55.0%
GGACAGTTGAGCAACAGTGC+AGG + chr2.2:7179939-7179958 None:intergenic 55.0%
GGATGGGAAAAGGTGAGGCT+TGG - chr2.2:7179490-7179509 MS.gene074324:intron 55.0%
TATTGCTTCTGCAGCGTCCG+TGG + chr2.2:7180037-7180056 None:intergenic 55.0%
TGCTGCCTTTCTCTCCAACG+TGG - chr2.2:7177839-7177858 MS.gene074324:intron 55.0%
TGGGTTTCCTCACAGACCTG+TGG - chr2.2:7176974-7176993 MS.gene074324:intron 55.0%
! GCGATTGACTTCACGGGGAT+GGG - chr2.2:7179474-7179493 MS.gene074324:intron 55.0%
! GCTTGCTGACACATGACCCA+AGG + chr2.2:7176597-7176616 None:intergenic 55.0%
! TGCGATTGACTTCACGGGGA+TGG - chr2.2:7179473-7179492 MS.gene074324:intron 55.0%
!!! GCACGCTTTTTCCAACGAGG+CGG - chr2.2:7177017-7177036 MS.gene074324:intron 55.0%
ACATGGGGAGCGGGGATCAT+CGG - chr2.2:7179038-7179057 MS.gene074324:intron 60.0%
CACGGGGATGGGAAAAGGTG+AGG - chr2.2:7179485-7179504 MS.gene074324:intron 60.0%
GTGAAAGCAGTGGCTGAGGC+AGG - chr2.2:7175997-7176016 MS.gene074324:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 7175245 7180705 7175245 ID=MS.gene074324
chr2.2 mRNA 7175245 7180705 7175245 ID=MS.gene074324.t1;Parent=MS.gene074324
chr2.2 exon 7180553 7180705 7180553 ID=MS.gene074324.t1.exon1;Parent=MS.gene074324.t1
chr2.2 CDS 7180553 7180705 7180553 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7180372 7180467 7180372 ID=MS.gene074324.t1.exon2;Parent=MS.gene074324.t1
chr2.2 CDS 7180372 7180467 7180372 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7179877 7179989 7179877 ID=MS.gene074324.t1.exon3;Parent=MS.gene074324.t1
chr2.2 CDS 7179877 7179989 7179877 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7179736 7179802 7179736 ID=MS.gene074324.t1.exon4;Parent=MS.gene074324.t1
chr2.2 CDS 7179736 7179802 7179736 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7179565 7179657 7179565 ID=MS.gene074324.t1.exon5;Parent=MS.gene074324.t1
chr2.2 CDS 7179565 7179657 7179565 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7179315 7179458 7179315 ID=MS.gene074324.t1.exon6;Parent=MS.gene074324.t1
chr2.2 CDS 7179315 7179458 7179315 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7179087 7179175 7179087 ID=MS.gene074324.t1.exon7;Parent=MS.gene074324.t1
chr2.2 CDS 7179087 7179175 7179087 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7178889 7178994 7178889 ID=MS.gene074324.t1.exon8;Parent=MS.gene074324.t1
chr2.2 CDS 7178889 7178994 7178889 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7178677 7178764 7178677 ID=MS.gene074324.t1.exon9;Parent=MS.gene074324.t1
chr2.2 CDS 7178677 7178764 7178677 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7178358 7178476 7178358 ID=MS.gene074324.t1.exon10;Parent=MS.gene074324.t1
chr2.2 CDS 7178358 7178476 7178358 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7177979 7178140 7177979 ID=MS.gene074324.t1.exon11;Parent=MS.gene074324.t1
chr2.2 CDS 7177979 7178140 7177979 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7177584 7177774 7177584 ID=MS.gene074324.t1.exon12;Parent=MS.gene074324.t1
chr2.2 CDS 7177584 7177774 7177584 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7177402 7177496 7177402 ID=MS.gene074324.t1.exon13;Parent=MS.gene074324.t1
chr2.2 CDS 7177402 7177496 7177402 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7177042 7177151 7177042 ID=MS.gene074324.t1.exon14;Parent=MS.gene074324.t1
chr2.2 CDS 7177042 7177151 7177042 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7176817 7176933 7176817 ID=MS.gene074324.t1.exon15;Parent=MS.gene074324.t1
chr2.2 CDS 7176817 7176933 7176817 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7176633 7176734 7176633 ID=MS.gene074324.t1.exon16;Parent=MS.gene074324.t1
chr2.2 CDS 7176633 7176734 7176633 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7176301 7176512 7176301 ID=MS.gene074324.t1.exon17;Parent=MS.gene074324.t1
chr2.2 CDS 7176301 7176512 7176301 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7175871 7176207 7175871 ID=MS.gene074324.t1.exon18;Parent=MS.gene074324.t1
chr2.2 CDS 7175871 7176207 7175871 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
chr2.2 exon 7175245 7175370 7175245 ID=MS.gene074324.t1.exon19;Parent=MS.gene074324.t1
chr2.2 CDS 7175245 7175370 7175245 ID=cds.MS.gene074324.t1;Parent=MS.gene074324.t1
Gene Sequence

>MS.gene074324

ATGAGAGCCACTAAAATTGTGTTGGTCATGCTTTGGTTCCTACCAACAATGTTTTGCACCAATGTGGATTATGATCATAGAGCATTGCTCATTGATGGTAAACGTAGGGTCTTGATTTCTGGTTCTATTCACTACCCTCGTAGTACTCCACAGGTTTTCTGTCTCTCTTTGATTCTGTTTTGTGAGTTTTTGCATTGTATTTGATTTTAAACAGTGTTGAATTTATTGTTTTTTATAGATGTGGCCAGACCTTATTCAGAAATCTAAAGATGGAGGACTTGATGTCATTGAAACCTATGTTTTCTGGAACTTACATGAACCTGTTAAAGGCCAGGTTCTCTTTGCTTAATTTCTTCTCTCACGTTCTTACCATTTTCTTTGAGCATTGCATTGCATTTGTTCATTGCTTGCAGGAAAAGAAAACAAGTGTCTATGTTAAGCCGAATTGCTAATTGTTGAAAGCATGACTCAACAAGTTTGGATTGACTTATTTGAGTTTATCTACTGACATAATATTCTCCAAGATAGATAATGAAACATATTAATTATATGAAAACAATATGACTTTGTTTTATCTTTTGTAAATAGAATATCTTATACATAAGCAGTTATATGCTTTAAGCACTTAATAAAGTAGTTTATCCAAACATGGTCTAGACCTACTATAAGCTTAGAAAGACTATCTTAACTCATTGAAATGAAATGGATTTTTGCAGTATGATTTTGATGGGAGGAAGGATTTGGTGAAATTTGTGAAAGCAGTGGCTGAGGCAGGTCTATATGTGCATCTCCGTATTGGTCCATATGTTTGTGCTGAATGGAACTACGGGTAAAGTTTTGTAATTTATGTGTATATTTTTCTGGGGTATTCATGTCTAATTGAGGGCTTTAACTTCTTGACAGTGGTTTCCCTCTTTGGCTTCACTTCATTCCAGGGATTAAGTTCCGAACTGACAATGAACCATTTAAGGTAAGGTGACCTTCACCCTAGTGCTTCATGCTTTTGTCCTTAAATCTGAGTTCACTTGCCAGGAAACTTTGTCTTCAGGCCGAAATGAAGCGATTCACCGCTAAGATTGTTGATCTCATGAAGCAAGAGAAATTGTATGCATCACAAGGAGGACCTATAATTTTATCCCAGGTTTTTTATCATTAAATACAAGTATATAGTTAACATATTTTTGAAGATATTAAGATCAAAGTTTATATTTGTTAATGTGAGAGTATTTGTGCTTTTCTAATGCCAGATTGAAAATGAGTATGGAGACATCGATTCAGCCTATGGTTCTGCTGGTAAATCATACATCAATTGGGCAGCAAAAATGGCTACATCTCTTGATACAGGTGTTCCTTGGGTCATGTGTCAGCAAGCAGATGCTCCTGATCCAATCGTAAGTTTTATGTTTTGATATGTCAATGTTAATTGTTTTTTAGTTTATGGTTTACTAGGTTGCCTGTCTTCCGGAAAAGAGCAATCTTAGTATGCTGTTTGCATTCATCTTACTCGATTTTTACTTGAACTGCATGAAGATTAATACCTGCAATGGATTTTACTGCGATCAATTCACACCAAACTCTAAAACAAAGCCAAAAATGTGGACTGAAAATTGGAGTGCATGGTTAGCAACTTAGCATCCTTTTTTGTATAAATAATTTAATTGAATTGTTTTTGTTATTTTCCAAATCTTACTTGAATTCCTTGGAATGGTAGGTATCTTTTATTTGGTGGTGGGTTTCCTCACAGACCTGTGGAAGATCTTGCATTTTCTGTTGCACGCTTTTTCCAACGAGGCGGTACATTTCAAAATTACTATATGGTATTGCAACCTGAAATGTTGTTCACAAGTTCAATTTTATATGATAGTAGTACTTCAGGGAAAAATTGGCTCTAAGAGGAATTAGCTGATACTGTGTCATTTTTTATTGCTTGCTCAAAAACAGTACCATGGAGGAACCAACTTTGACCGAAGTACTGGCGGACCTTTCATTGCTACTAGTTATGATTTTGATGCACCAATTGATGAGTATGGTATGACTCCTTCAACCTTAATACTGAAATCTATTGTTCATATTGTAGCCGTCACAAATACAACACTGGTAATACATCGAAGAAGATAAATTAATAATATCACATGCATAGTTTATTTCTTATATGTAGAAGAGAAATTACACAGGACAATTTTGTGTTCTTTAATATATTTTTTTAAATATCTTTGCTATATGCTGCAGGAATTATTAGGCAGCCGAAGTGGGGTCATCTTAAAGATTTGCACAAGGCCATAAAGCTTTGTGAAGAAGCATTAATAGCTACAGAACCCAAGATTACTTCTCTTGGTCAAAACCTAGAGGTATAGGTGGTTTATATTGAAATTTTTGTCCGTTTGAAACATCTTATTTCGCATCTTAGGATAGAATTTATTTTGTAACTAAAATTCATCTGGTTTGTCAATCTTGTAAGTTTCTTTCTCTGGAAAATTCCCGGCATTGAGTGCAATGTTGCCACAACCACTATTTGGGGCACTAACTAGATTAGGTCTTAACAATCTTTTACTATTTAAACCGCAGGCGGCAGTTTATAAGACAGGATCTGTATGTGCTGCCTTTCTCTCCAACGTGGACACTGAAAATGATAAAATTGTAAATTTCAGTGGCAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTTACCAGATTGCAAGAATGTAGTGCTTAATACTGCAAAGGTTTGTCTTACCTTCATTTATGTTAAGTTGCTTCAATAACACGATTATCGCAATCAAAATAGATAGTTTAATTGAATAGAGTTGCTAAAAAAGTGTGATTAATATTCATTGTGTGATTAACCTATCTATAAACAGGGTGTTTGCTCTTATTTATTAGTCCAAGGTAAGTAGAATGTAATAAAAATAACATTTTTATTATGGCAGATTAATTCTGCATCTGCGATTTCAAACTTCGTATCTGAAGATATCGGTTCTTTAGAAACTTCTAGTTCAAAATGGAGTTGGATAAAAGAACCTGTGGGTATTTCGAAGGATGTTGTATTTTCAAAAACTGGATTACTTGAGCAAATAAATATCACAGCTGATAGAAGTGACTACTTGTGGTACTCATTAAGGTACACAAGCCTCCAAGTTTGAAAGATATTTTCCCTGACCGATGATTCTGTACTTCTCGATAACACTTCTATCGTATTCTTTTGAAGCGTTGATCTTAAGGATGATCCTGGTTCTCAAACTGTCCTTCACATTGAATCGCTTGGCCATGCCCTTCATGCTTTCATAAACGGAAAGCTTGCAGGTAATTATTCACTAGGATTTTATGGTTTTTATATTTTGAAAGTCTCTAAGAGCCTGTGTTATTGAAACTCAAATGAAGTCGAGGTTGATTTTAAAACAAGTTAAAAATATGAGATTGATCATGGACTTTTATTTTTCAAGGAGAGTTCATCATGGATGTTCCGTCCAAAAATGTTCATAATTTATTGTTTCAATTAATTTCTTGAATTATTAAATAATAACTTTCTATGATATTATTGATGAATTCTTAGGGAGTCAAACCGGGAACAAAGACAAACCTAAGCTTAACGTGGACATCCCAATCACAGTAATTTCTGGAAAGAATAAAATTGATCTGCTGAGTTTAACAGTTGGACTTCAGGTTCAGCTTTTCTTGTTTTTAGTTTCCAATTATGCATAGAATAGCTTAGTCCTCCAATGATTTCTCTCATTACTGTATCTAAGCTAACATGAATCATATGCACATCAGAACTATGGAGCTTTTTTTGACACATGGGGAGCGGGGATCATCGGTCCAGTGATATTGAAAGGTTTGAAGAATGGCAACAACACTCTTGATCTCTCCTCTCGGAAGTGGACATACCAGGTCGGTCTTCACTTTTGATCGAAGACTATTTATTAGTCTTAATGAAGATACATTGTTAATGGAGTTAACTCTTTTGATACAGGTCGGCCTAAAAGGTGAAGATTTAGGTCTCTCTAGTGGAAATTCCGGAGGATGGAATTCACAGTCTACTTTCCCTAAGAACCAACCGTTGATTTGGTACAAGGTAATTTTATTTTAAATTTATTGTTTCCCTTGATATAAGTTAGGGAATTTTAAATTAAGGGAATGCCACTGTATGAAAAATGTTTGTTTCTACTAACCGATGTGACACATGTTGCATTAGACAAACTTTGATGCTCCATCCGGCAGTAATCCAGTTGCGATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAAAGCATTGGGCGATACTGGCCTACATATGTTGCTTCAAATGCCGATTGCACAGACTCATGCAACTACAGAGGACCTTTTACTCAAACCAAATGTCACATGAATTGTGGAAAACCATCACAGACATTGTAAGTGTTGCAAATTTTCAATGAAATAGAGCTTAAACATGAAAAAAAAATCTTGATCTATGATGTGACTGAGACATTAATCCCATCTCACAGATACCATGTACCACGATCGTTTTTGAAACCAAACGACAACACTCTTGTATTGTTTGAGGAAAGTGGTGGTGATCCAACACAAATAGCTTTTGCTACAAAACAGCTAGAAAGTTTGTGTGCACATGTATCTGATTCTCACCCACCTCAAATAGACTTGTGGAACCAAGATACAGAATCAGGGGAAAAAGTAGGGCCTGCACTGTTGCTCAACTGTCCTAATCATAATCAGGTAATCTCTTCCATTAAATTTGCAAGCTATGGAACACCACTAGGGACATGCGGAAACTTCTACCACGGACGCTGCAGAAGCAATAAGGCGATGTCAATTGTAAAGAAGGTGTTTATCTGGATTCCTGTTCCCTTGCTAATTTGTTATGTTTCACTTTGGTTTAGATCGACTATGTTGGGTATGGCTCATAGTTTACTGATATGTGAGTAGGTTGCTTGAGCTGGTGTGAATAATAGAAAATCAACTAATCAACTAATAGTATTTAAACACAAGCACTAATATATAACCCTATGCTTGAACAATAGAAAACCACTACAACCACTGTGCATTTGTAGACGTAGACACAATTGGCCAAACTCTGTTATCAAATCTTAGTTTTTTCCGTTGGTTTTAAAGTGGTTAGCGGCGAAACTCATACACACTATGTGCAGAGAAGTGGAGAATTGTAGGTTCGAACCTGCGCTCCAATATATCAAATGTCCCTACAGCGTTTTACCGTCTAAGTTGTACTTACGGGACAATCTTTTGTGTTATTTGTTTGTGTTTTTCATATCTGATTTCTTTTGAACCAGAGTTGTTGTAACATACTAAAATTATCTTATTGACAGGCCTGCATTGGATCAAGAAGTTGTAGTGTTGGAGTATCAACTGATACATTTGGAGACCCTTGTAGAGGAGTGCCAAAGAGTTTAGCTGTTGAAGCTACTTGTGCTTATAGCCATACAGACATATAA
Protein sequence

>MS.gene074324.t1

MRATKIVLVMLWFLPTMFCTNVDYDHRALLIDGKRRVLISGSIHYPRSTPQMWPDLIQKSKDGGLDVIETYVFWNLHEPVKGQYDFDGRKDLVKFVKAVAEAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMKRFTAKIVDLMKQEKLYASQGGPIILSQIENEYGDIDSAYGSAGKSYINWAAKMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSKTKPKMWTENWSAWYLLFGGGFPHRPVEDLAFSVARFFQRGGTFQNYYMYHGGTNFDRSTGGPFIATSYDFDAPIDEYGIIRQPKWGHLKDLHKAIKLCEEALIATEPKITSLGQNLEAAVYKTGSVCAAFLSNVDTENDKIVNFSGNSYHLPAWSVSILPDCKNVVLNTAKINSASAISNFVSEDIGSLETSSSKWSWIKEPVGISKDVVFSKTGLLEQINITADRSDYLWYSLSVDLKDDPGSQTVLHIESLGHALHAFINGKLAGSQTGNKDKPKLNVDIPITVISGKNKIDLLSLTVGLQNYGAFFDTWGAGIIGPVILKGLKNGNNTLDLSSRKWTYQVGLKGEDLGLSSGNSGGWNSQSTFPKNQPLIWYKTNFDAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVASNADCTDSCNYRGPFTQTKCHMNCGKPSQTLYHVPRSFLKPNDNTLVLFEESGGDPTQIAFATKQLESLCAHVSDSHPPQIDLWNQDTESGEKVGPALLLNCPNHNQVISSIKFASYGTPLGTCGNFYHGRCRSNKAMSIVKKACIGSRSCSVGVSTDTFGDPCRGVPKSLAVEATCAYSHTDI