AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene074327

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074327.t1 MTR_2g094020 93.540 805 52 0 1 805 1 805 0.0 1575
MS.gene074327.t1 MTR_2g094060 91.925 805 61 1 1 805 1 801 0.0 1528
MS.gene074327.t1 MTR_2g094060 91.677 805 63 1 1 805 1 801 0.0 1523
MS.gene074327.t1 MTR_2g094060 91.739 690 53 1 1 690 1 686 0.0 1302
MS.gene074327.t1 MTR_4g059680 76.761 809 182 3 1 805 1 807 0.0 1302
MS.gene074327.t1 MTR_8g016230 54.648 796 332 9 20 802 23 802 0.0 894
MS.gene074327.t1 MTR_5g021190 54.015 822 343 14 6 812 11 812 0.0 889
MS.gene074327.t1 MTR_2g100110 54.591 795 334 9 20 802 26 805 0.0 875
MS.gene074327.t1 MTR_1g018200 58.626 713 272 8 21 723 30 729 0.0 856
MS.gene074327.t1 MTR_2g039120 55.951 731 300 7 2 723 8 725 0.0 852
MS.gene074327.t1 MTR_1g023120 55.586 725 283 8 16 723 24 726 0.0 835
MS.gene074327.t1 MTR_8g085210 51.264 831 352 13 12 802 44 861 0.0 830
MS.gene074327.t1 MTR_2g039120 56.034 696 284 8 2 688 8 690 0.0 810
MS.gene074327.t1 MTR_2g042610 52.363 804 337 15 18 805 23 796 0.0 808
MS.gene074327.t1 MTR_3g112370 51.926 753 318 10 1 730 1 732 0.0 803
MS.gene074327.t1 MTR_3g096900 56.039 712 298 6 20 721 25 731 0.0 798
MS.gene074327.t1 MTR_1g023120 55.152 689 271 7 52 723 1 668 0.0 784
MS.gene074327.t1 MTR_5g025830 49.628 806 349 15 19 805 23 790 0.0 766
MS.gene074327.t1 MTR_5g024080 48.134 804 369 15 13 801 1 771 0.0 758
MS.gene074327.t1 MTR_3g096900 55.523 679 287 6 20 688 25 698 0.0 748
MS.gene074327.t1 MTR_2g039120 55.573 628 259 6 2 620 8 624 0.0 722
MS.gene074327.t1 MTR_3g005570 45.577 814 394 11 1 805 5 778 0.0 719
MS.gene074327.t1 MTR_2g100110 58.014 574 221 5 21 586 27 588 0.0 694
MS.gene074327.t1 MTR_4g073290 44.336 821 401 16 9 809 10 794 0.0 693
MS.gene074327.t1 MTR_2g039120 56.007 591 243 4 2 586 8 587 0.0 693
MS.gene074327.t1 MTR_3g096910 50.633 711 304 13 22 722 27 700 0.0 687
MS.gene074327.t1 MTR_3g117840 43.342 796 401 14 21 803 34 792 0.0 678
MS.gene074327.t1 MTR_3g096900 55.848 607 254 5 20 617 25 626 0.0 671
MS.gene074327.t1 MTR_3g088520 48.414 725 327 12 8 727 12 694 0.0 661
MS.gene074327.t1 MTR_3g088520 48.018 681 307 12 52 727 1 639 0.0 611
MS.gene074327.t1 MTR_3g096910 46.678 587 266 13 146 722 1 550 6.26e-167 496
MS.gene074327.t1 MTR_5g022590 40.798 326 154 7 41 364 11 299 2.93e-76 254
MS.gene074327.t1 MTR_5g022590 35.537 121 63 3 690 801 304 418 2.18e-15 79.7
MS.gene074327.t1 MTR_4g126330 35.577 416 160 10 277 688 131 442 8.44e-65 224
MS.gene074327.t1 MTR_4g126330 67.391 92 30 0 77 168 25 116 2.35e-37 146
MS.gene074327.t1 MTR_3g005610 36.140 285 141 8 438 712 27 280 1.35e-40 152
MS.gene074327.t1 MTR_2g059440 33.916 286 145 8 438 712 27 279 2.25e-34 134
MS.gene074327.t1 MTR_2g100000 31.003 329 188 8 32 330 64 383 2.66e-30 128
MS.gene074327.t1 MTR_2g059430 30.303 264 116 5 454 712 11 211 2.01e-23 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074327.t1 AT2G28470 72.166 794 208 6 21 805 31 820 0.0 1188
MS.gene074327.t1 AT2G28470 72.166 794 208 6 21 805 31 820 0.0 1188
MS.gene074327.t1 AT2G28470 72.166 794 208 6 21 805 25 814 0.0 1186
MS.gene074327.t1 AT2G28470 72.166 794 208 6 21 805 25 814 0.0 1186
MS.gene074327.t1 AT2G28470 74.041 678 166 4 19 690 29 702 0.0 1050
MS.gene074327.t1 AT4G36360 54.030 794 336 11 22 802 33 810 0.0 891
MS.gene074327.t1 AT4G36360 54.182 801 324 11 22 802 33 810 0.0 891
MS.gene074327.t1 AT3G13750 53.715 821 348 11 7 811 19 823 0.0 882
MS.gene074327.t1 AT2G32810 52.019 842 358 13 2 806 13 845 0.0 880
MS.gene074327.t1 AT2G32810 51.389 864 364 15 2 818 13 867 0.0 879
MS.gene074327.t1 AT4G26140 55.322 714 296 9 22 726 29 728 0.0 822
MS.gene074327.t1 AT1G45130 53.784 740 303 9 4 725 13 731 0.0 816
MS.gene074327.t1 AT3G52840 55.191 732 302 11 6 726 65 781 0.0 813
MS.gene074327.t1 AT3G52840 55.191 732 302 11 6 726 11 727 0.0 811
MS.gene074327.t1 AT4G26140 53.721 739 294 11 22 726 29 753 0.0 808
MS.gene074327.t1 AT5G20710 49.505 808 361 15 2 795 8 782 0.0 802
MS.gene074327.t1 AT5G63810 52.981 738 326 9 3 728 13 741 0.0 796
MS.gene074327.t1 AT5G56870 53.825 719 307 9 14 723 21 723 0.0 792
MS.gene074327.t1 AT4G26140 54.066 701 274 11 22 688 29 715 0.0 771
MS.gene074327.t1 AT1G31740 47.917 816 339 15 1 802 1 744 0.0 749
MS.gene074327.t1 AT1G77410 46.972 809 379 13 6 802 9 779 0.0 719
MS.gene074327.t1 AT1G77410 46.683 814 379 14 6 802 9 784 0.0 714
MS.gene074327.t1 AT1G45130 52.950 661 272 9 83 725 13 652 0.0 714
MS.gene074327.t1 AT4G26140 56.178 607 245 6 22 620 29 622 0.0 710
MS.gene074327.t1 AT4G26140 56.178 607 245 6 22 620 29 622 0.0 710
MS.gene074327.t1 AT4G26140 56.250 608 245 7 22 620 29 624 0.0 707
MS.gene074327.t1 AT5G63800 47.458 708 330 11 22 722 32 704 0.0 666
MS.gene074327.t1 AT2G16730 42.250 800 404 16 22 802 44 804 0.0 657
MS.gene074327.t1 AT4G26140 58.868 530 202 5 22 545 29 548 0.0 652
MS.gene074327.t1 AT4G35010 41.677 799 410 16 22 802 41 801 0.0 643
MS.gene074327.t1 AT4G26140 56.577 555 200 7 22 545 29 573 0.0 639
MS.gene074327.t1 AT4G26140 56.577 555 200 7 22 545 29 573 0.0 639
MS.gene074327.t1 AT4G38590 41.299 770 395 16 52 802 1 732 0.0 607
MS.gene074327.t1 AT4G38590 40.909 770 402 16 48 802 65 796 0.0 599
MS.gene074327.t1 AT1G77410 45.115 696 332 13 122 805 19 676 0.0 570
MS.gene074327.t1 AT1G77410 45.115 696 332 13 122 805 19 676 0.0 570
MS.gene074327.t1 AT5G20710 45.574 610 285 15 200 795 1 577 7.53e-180 531
MS.gene074327.t1 AT2G04060 35.484 372 159 7 287 655 23 316 1.23e-56 202
MS.gene074327.t1 AT2G04062 42.246 187 67 3 18 194 3 158 3.54e-41 148
MS.gene074327.t1 AT1G72990 35.241 332 174 11 32 332 18 339 5.86e-40 157
MS.gene074327.t1 AT1G72990 35.241 332 174 11 32 332 73 394 7.97e-40 157
MS.gene074327.t1 AT1G72990 35.241 332 174 11 32 332 73 394 7.97e-40 157
MS.gene074327.t1 AT1G72990 34.268 321 170 11 43 332 22 332 7.10e-35 142

Find 206 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCTTCACAAAGCTTTA+TGG 0.109681 2.2:+7141953 None:intergenic
CAAATCAATGGTTGGTTCTT+AGG 0.156626 2.2:+7140192 None:intergenic
AAACGTAGGGTCTTGATTTC+TGG 0.165476 2.2:-7144138 MS.gene074327:CDS
TTGACAGTGGTTTCCCTCTT+TGG 0.180260 2.2:-7143312 MS.gene074327:intron
GAAAGTTAACCTACCTTAAA+TGG 0.183218 2.2:+7143247 None:intergenic
TGACATTTGGTTTGAGTAAA+AGG 0.209652 2.2:+7139884 None:intergenic
AACTGACAATGAACCATTTA+AGG 0.218158 2.2:-7143260 MS.gene074327:intron
CTTTGGCTTCACTTCATTCC+AGG 0.251644 2.2:-7143295 MS.gene074327:CDS
TTGATACAGGTTGGCCTAAA+AGG 0.256059 2.2:-7140273 MS.gene074327:intron
ATCCCAATCACAGTTCTTTC+TGG 0.259931 2.2:-7140637 MS.gene074327:CDS
AAAGGTGAGGCTTGGGTAAA+TGG 0.261772 2.2:-7139983 MS.gene074327:CDS
TTGTAAAGAAGGTGTTTATC+TGG 0.271575 2.2:-7139412 MS.gene074327:CDS
CTTGTATTGTTTGAGGAAAA+TGG 0.275914 2.2:-7139695 MS.gene074327:CDS
AACTTACATGAACCTGTTAA+AGG 0.282398 2.2:-7143922 MS.gene074327:CDS
GTTACCTTGCTAATTTGTTA+TGG 0.286526 2.2:-7139383 MS.gene074327:CDS
GAGTTTAACAGTTGGACTTC+AGG 0.290254 2.2:-7140593 MS.gene074327:intron
CTGGTAAATCATACATCAAT+TGG 0.305487 2.2:-7142922 MS.gene074327:CDS
TAGAAACTTCTAAATCAAAA+TGG 0.306213 2.2:-7141252 MS.gene074327:CDS
GGTTCACTATATGTTGAGTA+TGG 0.310074 2.2:-7139362 MS.gene074327:CDS
CATCTTTAGATTTCTGAATA+AGG 0.312398 2.2:+7143980 None:intergenic
GTTTGTTCTGAATGGAACTA+TGG 0.315154 2.2:-7143403 MS.gene074327:CDS
CGGACGCTGCAGCAGCAATA+AGG 0.321735 2.2:-7139444 MS.gene074327:CDS
CTCTTGATACAGGTGTTCCT+TGG 0.323700 2.2:-7142880 MS.gene074327:CDS
TTTGGCTTTGTATTAGAGTT+TGG 0.326326 2.2:+7142645 None:intergenic
ACTACTTGTGGTACTCATTA+AGG 0.331342 2.2:-7141135 MS.gene074327:intron
TTCATAAACGGAAAGCTTGC+AGG 0.332162 2.2:-7140953 MS.gene074327:intron
CTAAGAACCAACCATTGATT+TGG 0.332944 2.2:-7140191 MS.gene074327:CDS
GGCCTAAAAGGTGAAGATTT+AGG 0.334619 2.2:-7140261 MS.gene074327:CDS
AAATCAATGGTTGGTTCTTA+GGG 0.336328 2.2:+7140193 None:intergenic
GACAAAGCATTGGGCGATAC+TGG 0.337595 2.2:-7139961 MS.gene074327:CDS
AAGAGAACCTGGCCTTTAAC+AGG 0.337674 2.2:+7143910 None:intergenic
GCCCTTCATGCTTTCATAAA+CGG 0.346473 2.2:-7140965 MS.gene074327:CDS
AAAACCTGGGATAAAATTAT+AGG 0.349049 2.2:+7143086 None:intergenic
AACATTTCAAAATTACTATA+TGG 0.352183 2.2:-7142419 MS.gene074327:intron
AATACAAGAGTGTTGCCTTT+TGG 0.358808 2.2:+7139710 None:intergenic
TCCATAGCTTGCAAATTTGA+TGG 0.361451 2.2:+7139499 None:intergenic
GTCCATATGTTTGTTCTGAA+TGG 0.369412 2.2:-7143411 MS.gene074327:CDS
GAGATTACCTGATTATGATT+AGG 0.371095 2.2:+7139524 None:intergenic
AGCATTACATTCTTGCAATC+TGG 0.374421 2.2:+7141539 None:intergenic
TCCACAATTCATGTGACATT+TGG 0.376285 2.2:+7139871 None:intergenic
TTTCCAGAAAGAACTGTGAT+TGG 0.387504 2.2:+7140634 None:intergenic
CAACACTCTTGTATTGTTTG+AGG 0.391736 2.2:-7139702 MS.gene074327:CDS
CCATATGCATATCAGAACTA+TGG 0.392906 2.2:-7140478 MS.gene074327:intron
TCCATCAAATTTGCAAGCTA+TGG 0.398311 2.2:-7139500 MS.gene074327:CDS
TGCCAGATTGAAAATGAGTA+TGG 0.398646 2.2:-7142971 MS.gene074327:intron
TAACAAATTAGCAAGGTAAC+AGG 0.399369 2.2:+7139386 None:intergenic
TGGAACCAAGATACAGAATC+AGG 0.402684 2.2:-7139581 MS.gene074327:CDS
GAATTCTTAGGGAGTCAAAC+CGG 0.407325 2.2:-7140691 MS.gene074327:intron
TCTTGATACAGGTGTTCCTT+GGG 0.408696 2.2:-7142879 MS.gene074327:CDS
CTCTCGGAAGTGGACATATC+AGG 0.420953 2.2:-7140368 MS.gene074327:intron
CAAGTGTCCTAATCATAATC+AGG 0.421130 2.2:-7139531 MS.gene074327:CDS
CCCGTGAAGTCAATCGCAAC+TGG 0.421516 2.2:+7140013 None:intergenic
GATGCACCGATTGATGAGTA+TGG 0.422535 2.2:-7142207 MS.gene074327:intron
ACCATCTATACCTCTAGGTT+TGG 0.422780 2.2:+7141894 None:intergenic
AGTGTCCATGTTGGCGAGAA+AGG 0.423175 2.2:+7141631 None:intergenic
ACATGGGGAGCGGGGATCAC+TGG 0.424315 2.2:-7140442 MS.gene074327:CDS
CCAACCATTGATTTGGTACA+AGG 0.434681 2.2:-7140184 MS.gene074327:intron
CACAATTTCAGTGGCTCTCA+TGG 0.434872 2.2:+7144239 None:intergenic
TTCCAGAAAGAACTGTGATT+GGG 0.438152 2.2:+7140635 None:intergenic
AGTCAATCGCAACTGGATTA+CGG 0.438682 2.2:+7140020 None:intergenic
TGCGATTGACTTCACGGGGA+TGG 0.439820 2.2:-7140008 MS.gene074327:CDS
TCCAGTTGCGATTGACTTCA+CGG 0.439836 2.2:-7140014 MS.gene074327:CDS
TGGTTCCACGAGTCTATTTG+AGG 0.441184 2.2:+7139596 None:intergenic
TTAGATTTCTGAATAAGGTC+TGG 0.443250 2.2:+7143985 None:intergenic
CAGGTCTATTTGTGCACCTC+CGG 0.443823 2.2:-7143438 MS.gene074327:CDS
AAATTGTGTTGGTCATGCTT+TGG 0.443902 2.2:-7144224 MS.gene074327:CDS
TACATGCTGCAGGAATTATT+AGG 0.444348 2.2:-7142013 MS.gene074327:intron
CTTCTAAATCAAAATGGAGT+TGG 0.445338 2.2:-7141246 MS.gene074327:CDS
GCGATTGACTTCACGGGGAT+GGG 0.451344 2.2:-7140007 MS.gene074327:CDS
TGGACCAGGAGAAGTAATCT+TGG 0.452605 2.2:+7141914 None:intergenic
GGTCTCTCTAGTGGAAGTTC+CGG 0.453529 2.2:-7140240 MS.gene074327:CDS
ATTACCTTGTACCAAATCAA+TGG 0.454297 2.2:+7140180 None:intergenic
AGACCATGCAGGCAAGTGAT+AGG 0.454781 2.2:+7141574 None:intergenic
CATAGAGCATTGGTCATTGA+TGG 0.455109 2.2:-7144162 MS.gene074327:CDS
GGAGACATTGATTCAGCCTA+TGG 0.460083 2.2:-7142950 MS.gene074327:CDS
TAAATGGTTCATTGTCAGTT+CGG 0.461736 2.2:+7143263 None:intergenic
GATGGGAAAAGGTGAGGCTT+GGG 0.463029 2.2:-7139990 MS.gene074327:CDS
TTCCATTCAGAACAAACATA+TGG 0.463211 2.2:+7143409 None:intergenic
ATCGCAGTAAAATCCATTGC+AGG 0.465312 2.2:+7142677 None:intergenic
GTCCTTCACATTGAATCGCT+TGG 0.467032 2.2:-7140992 MS.gene074327:CDS
TTTGGCTTCACTTCATTCCA+GGG 0.468859 2.2:-7143294 MS.gene074327:CDS
ATTCCTATCACTTGCCTGCA+TGG 0.471097 2.2:-7141577 MS.gene074327:CDS
GGGATGTCCACATTAAGCTT+AGG 0.472710 2.2:+7140655 None:intergenic
TTCAAAGCTTTCAATATCAC+GGG 0.473204 2.2:+7140418 None:intergenic
GACTTCACGGGGATGGGAAA+AGG 0.474886 2.2:-7140001 MS.gene074327:CDS
GGACCAGGAGAAGTAATCTT+GGG 0.475258 2.2:+7141915 None:intergenic
GGACACTAAATATGATAAAA+CGG 0.477191 2.2:-7141615 MS.gene074327:CDS
ATGGCTACATCTCTTGATAC+AGG 0.477673 2.2:-7142890 MS.gene074327:CDS
CATGAGGTCGACAATCTTAG+TGG 0.478249 2.2:+7143142 None:intergenic
GATTCAGCCTATGGTTCTGC+TGG 0.479823 2.2:-7142941 MS.gene074327:CDS
GGACACTTGAGCAACAGTTC+AGG 0.480750 2.2:+7139545 None:intergenic
ATATTGAAAGCTTTGAAGAA+TGG 0.481853 2.2:-7140412 MS.gene074327:CDS
ACCAACTTTGACCGAAGTAC+TGG 0.484159 2.2:-7142261 MS.gene074327:CDS
GTAGCAAAAGATATTTGTGT+TGG 0.485090 2.2:+7139665 None:intergenic
CTATTTGTGCACCTCCGGAT+TGG 0.486916 2.2:-7143433 MS.gene074327:CDS
TTGATCTCTCCTCTCGGAAG+TGG 0.487529 2.2:-7140378 MS.gene074327:CDS
GCAAGCTATGGAACACCACT+AGG 0.487876 2.2:-7139488 MS.gene074327:CDS
CTTCAAAGCTTTCAATATCA+CGG 0.489393 2.2:+7140417 None:intergenic
TGGGTAAATGGACAAAGCAT+TGG 0.493909 2.2:-7139971 MS.gene074327:CDS
ATGAAACTTACGATTGGATC+AGG 0.495286 2.2:+7142833 None:intergenic
GGCGCTATCAATTGTAAAGA+AGG 0.495807 2.2:-7139423 MS.gene074327:CDS
GGATGGGAAAAGGTGAGGCT+TGG 0.496077 2.2:-7139991 MS.gene074327:CDS
GATGATATATTGTCAAAGAC+TGG 0.496602 2.2:-7141196 MS.gene074327:CDS
TTTGAAATGTTCCACCTCGT+TGG 0.498204 2.2:+7142431 None:intergenic
ACAAACTTTGATGCTCCATC+CGG 0.502467 2.2:-7140043 MS.gene074327:CDS
TCGTAACTTGTAGCAATGAA+TGG 0.504250 2.2:+7142234 None:intergenic
GTCATACCATACTCATCAAT+CGG 0.504787 2.2:+7142201 None:intergenic
GGGTAAATGGACAAAGCATT+GGG 0.505117 2.2:-7139970 MS.gene074327:CDS
ACATTGGTGCAATACATTGT+TGG 0.510034 2.2:+7144195 None:intergenic
ATCATATTTAGTGTCCATGT+TGG 0.515334 2.2:+7141622 None:intergenic
TGGTAAATCATACATCAATT+GGG 0.516725 2.2:-7142921 MS.gene074327:CDS
GTGAAAGCAGTGGCTGAGGC+AGG 0.519491 2.2:-7143457 MS.gene074327:CDS
ATGTAAGTTCCAGAAAACAT+AGG 0.522734 2.2:+7143936 None:intergenic
TATTGCTGCTGCAGCGTCCG+CGG 0.525719 2.2:+7139447 None:intergenic
AATTATTAGGCAGCCGAAGT+GGG 0.527035 2.2:-7142000 MS.gene074327:CDS
TTCCGTTTATGAAAGCATGA+AGG 0.527618 2.2:+7140963 None:intergenic
CTTATTCAGAAATCTAAAGA+TGG 0.530946 2.2:-7143979 MS.gene074327:CDS
TCAGTTCGGAACTTAATCCC+TGG 0.533302 2.2:+7143277 None:intergenic
GTTGCATGAGTCTGTGCAAT+CGG 0.533957 2.2:+7139916 None:intergenic
CCTTGTACCAAATCAATGGT+TGG 0.534068 2.2:+7140184 None:intergenic
ACCAAATGTCACATGAATTG+TGG 0.534217 2.2:-7139872 MS.gene074327:CDS
GCCAGTACTTCGGTCAAAGT+TGG 0.534915 2.2:+7142260 None:intergenic
CCAGTTGCGATTGACTTCAC+GGG 0.536094 2.2:-7140013 MS.gene074327:CDS
ACATGAACCTGTTAAAGGCC+AGG 0.536626 2.2:-7143917 MS.gene074327:intron
GAATTATTAGGCAGCCGAAG+TGG 0.536927 2.2:-7142001 MS.gene074327:CDS
GAACCCAAGATTACTTCTCC+TGG 0.538417 2.2:-7141918 MS.gene074327:CDS
GCATTTGAAGCAACATATGT+AGG 0.542208 2.2:+7139938 None:intergenic
GTTGATCTTAAGGATGATCC+TGG 0.545273 2.2:-7141025 MS.gene074327:CDS
CAGGCGGCAGTTTATAAGAC+AGG 0.545447 2.2:-7141668 MS.gene074327:CDS
TTCCACGAGTCTATTTGAGG+TGG 0.549895 2.2:+7139599 None:intergenic
TGAAGGACAGTTTGAGAACC+AGG 0.551200 2.2:+7141007 None:intergenic
TCCGTTTATGAAAGCATGAA+GGG 0.551369 2.2:+7140964 None:intergenic
TGATTTACCAGCAGAACCAT+AGG 0.557167 2.2:+7142934 None:intergenic
GGTCAAAGTTGGTTCCTCCA+TGG 0.559035 2.2:+7142271 None:intergenic
ATGAAGATTAATACCTGCAA+TGG 0.560132 2.2:-7142690 MS.gene074327:intron
ACAGTTTCTCTTGCTTCATG+AGG 0.563786 2.2:+7143126 None:intergenic
AACAAACATATGGACCAATC+CGG 0.570659 2.2:+7143419 None:intergenic
TGCTGCCTTTCTCGCCAACA+TGG 0.572866 2.2:-7141636 MS.gene074327:CDS
TGAATGGTCCGCCAGTACTT+CGG 0.575468 2.2:+7142250 None:intergenic
GCGTGCGGAAACTTCTACCG+CGG 0.576446 2.2:-7139464 MS.gene074327:CDS
TCCACGAGTCTATTTGAGGT+GGG 0.576939 2.2:+7139600 None:intergenic
AAGTTTCCGCACGCCCCTAG+TGG 0.584376 2.2:+7139473 None:intergenic
GATAAAACGGTAAATTTCAG+TGG 0.586951 2.2:-7141602 MS.gene074327:CDS
CAAGCTATGGAACACCACTA+GGG 0.587982 2.2:-7139487 MS.gene074327:CDS
TGGTGCAATACATTGTTGGT+AGG 0.589573 2.2:+7144199 None:intergenic
AATTCTTAGGGAGTCAAACC+GGG 0.592065 2.2:-7140690 MS.gene074327:intron
TGTAATGCTTAATACTGCAA+AGG 0.592170 2.2:-7141525 MS.gene074327:intron
TTATGAAAGCATGAAGGGCA+TGG 0.592259 2.2:+7140969 None:intergenic
CTAGTGGAAGTTCCGGAGCG+TGG 0.595019 2.2:-7140233 MS.gene074327:CDS
GGCCAAGCGATTCAATGTGA+AGG 0.596679 2.2:+7140990 None:intergenic
TTTGTTCTGAATGGAACTAT+GGG 0.596685 2.2:-7143402 MS.gene074327:intron
CTACCCTCGTAGTACTCCAC+AGG 0.598894 2.2:-7144106 MS.gene074327:intron
AATCGCAACTGGATTACGGC+CGG 0.599279 2.2:+7140024 None:intergenic
GGATTATGATCATAGAGCAT+TGG 0.599952 2.2:-7144172 MS.gene074327:CDS
ACACTCTTGATCTCTCCTCT+CGG 0.601381 2.2:-7140384 MS.gene074327:CDS
GGAACCAAGATACAGAATCA+GGG 0.601704 2.2:-7139580 MS.gene074327:CDS
TCTTTAAGATGACCCCACTT+CGG 0.602327 2.2:+7141987 None:intergenic
CGAACCTGTGGGTATTTCGA+AGG 0.602509 2.2:-7141218 MS.gene074327:CDS
GGTCATTGATGGTAAACGTA+GGG 0.603222 2.2:-7144151 MS.gene074327:CDS
AGTCTGCGAATTCCACGCTC+CGG 0.606728 2.2:+7140221 None:intergenic
GATCTGCTGAGTTTAACAGT+TGG 0.607244 2.2:-7140601 MS.gene074327:CDS
ATTTGTGAAAGCAGTGGCTG+AGG 0.607383 2.2:-7143461 MS.gene074327:CDS
CACGGGGATGGGAAAAGGTG+AGG 0.608159 2.2:-7139996 MS.gene074327:CDS
AACACTTACAATGTCTGTGA+TGG 0.608501 2.2:+7139845 None:intergenic
ACCCACCTCAAATAGACTCG+TGG 0.609714 2.2:-7139601 MS.gene074327:CDS
ATTCAGAAATCTAAAGATGG+AGG 0.610249 2.2:-7143976 MS.gene074327:CDS
GCAACTGGATTACGGCCGGA+TGG 0.610380 2.2:+7140028 None:intergenic
GAAGATTTAGGTCTCTCTAG+TGG 0.612338 2.2:-7140249 MS.gene074327:CDS
CTGATAGAAGTGACTACTTG+TGG 0.616428 2.2:-7141147 MS.gene074327:CDS
GGAATGAAGTGAAGCCAAAG+AGG 0.616620 2.2:+7143298 None:intergenic
TGGGTTTCCTCACAGACCTG+TGG 0.617107 2.2:-7142485 MS.gene074327:CDS
GAATGAAGTGAAGCCAAAGA+GGG 0.625466 2.2:+7143299 None:intergenic
TATACCTCTAGGTTTGGACC+AGG 0.627034 2.2:+7141900 None:intergenic
GGAACACCACTAGGGGCGTG+CGG 0.627397 2.2:-7139479 MS.gene074327:CDS
GAGTTGGATAAACGAACCTG+TGG 0.630510 2.2:-7141230 MS.gene074327:CDS
AACTTTGACCGAAGTACTGG+CGG 0.630915 2.2:-7142258 MS.gene074327:CDS
CTCACAGATACCACGTGCCA+CGG 0.632475 2.2:-7139745 MS.gene074327:intron
AACAATGTATTGCACCAATG+TGG 0.634669 2.2:-7144193 MS.gene074327:CDS
CAGTTGCGATTGACTTCACG+GGG 0.639490 2.2:-7140012 MS.gene074327:CDS
GGACTGAAAATTGGAGTGCA+TGG 0.640312 2.2:-7142617 MS.gene074327:intron
TGAACCATAACAAATTAGCA+AGG 0.641790 2.2:+7139379 None:intergenic
TGGTCATTGATGGTAAACGT+AGG 0.643774 2.2:-7144152 MS.gene074327:CDS
ATTATTAGGCAGCCGAAGTG+GGG 0.644195 2.2:-7141999 MS.gene074327:CDS
TCATCCTTCGAAATACCCAC+AGG 0.647345 2.2:+7141214 None:intergenic
GCTTGCTGACACATGACCCA+AGG 0.647657 2.2:+7142863 None:intergenic
CATGACCAACACAATTTCAG+TGG 0.649134 2.2:+7144230 None:intergenic
TCTATGATCATAATCCACAT+TGG 0.654567 2.2:+7144179 None:intergenic
GCAAATGCGAGATCTTCCAC+AGG 0.659001 2.2:+7142469 None:intergenic
GAACCAAGATACAGAATCAG+GGG 0.661311 2.2:-7139579 MS.gene074327:CDS
TCATCTTAAAGATGTGCACA+AGG 0.662362 2.2:-7141976 MS.gene074327:CDS
TTCTCCTGGTCCAAACCTAG+AGG 0.664057 2.2:-7141904 MS.gene074327:intron
AAGATGCTAACAGACCATGC+AGG 0.666065 2.2:+7141563 None:intergenic
GAGAGCCACTGAAATTGTGT+TGG 0.668549 2.2:-7144235 MS.gene074327:CDS
GGTGAAATTTGTGAAAGCAG+TGG 0.671103 2.2:-7143467 MS.gene074327:CDS
AAGCTATGGAACACCACTAG+GGG 0.683696 2.2:-7139486 MS.gene074327:CDS
GAGAAACTGTATGCATCACA+AGG 0.684935 2.2:-7143113 MS.gene074327:CDS
CAACCTGTGGAGTACTACGA+GGG 0.686780 2.2:+7144103 None:intergenic
AGATCTTCCACAGGTCTGTG+AGG 0.697656 2.2:+7142478 None:intergenic
GTATTGTTTGAGGAAAATGG+CGG 0.705148 2.2:-7139692 MS.gene074327:CDS
ACAGACTCATGCAACTACAG+AGG 0.715275 2.2:-7139908 MS.gene074327:CDS
AACCAAGATACAGAATCAGG+GGG 0.718470 2.2:-7139578 MS.gene074327:CDS
AAACATATGGACCAATCCGG+AGG 0.718576 2.2:+7143422 None:intergenic
CTGATATGTCCACTTCCGAG+AGG 0.725281 2.2:+7140369 None:intergenic
AGTTGGATAAACGAACCTGT+GGG 0.726289 2.2:-7141229 MS.gene074327:CDS
AAACTGTATGCATCACAAGG+AGG 0.756026 2.2:-7143110 MS.gene074327:CDS
ACAACCTGTGGAGTACTACG+AGG 0.762053 2.2:+7144102 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATTTCAAAATTACTATA+TGG - chr2.2:7141173-7141192 MS.gene074327:CDS 15.0%
!! AGTTTATGTGTATTATATTT+CGG - chr2.2:7140224-7140243 MS.gene074327:CDS 15.0%
!! ATATTATTGATGAATTCTTA+GGG - chr2.2:7142890-7142909 MS.gene074327:CDS 15.0%
!! TATTTAATGATAAAAAACCT+GGG + chr2.2:7140522-7140541 None:intergenic 15.0%
!!! CAATAAATTATGAACATTTT+TGG + chr2.2:7142828-7142847 None:intergenic 15.0%
!! AAATTCCATAACTTATATCA+AGG + chr2.2:7143460-7143479 None:intergenic 20.0%
!! AACAATAGATTTCAATATGA+AGG + chr2.2:7141425-7141444 None:intergenic 20.0%
!! AATATGATAGTATTACTTCA+CGG - chr2.2:7141232-7141251 MS.gene074327:CDS 20.0%
!! AATTCCATAACTTATATCAA+GGG + chr2.2:7143459-7143478 None:intergenic 20.0%
!! ATAGTAATTAGAGAAATCAT+TGG + chr2.2:7143077-7143096 None:intergenic 20.0%
!! ATATGTTTCATTATCTATCT+TGG + chr2.2:7139905-7139924 None:intergenic 20.0%
!! GATATTATTGATGAATTCTT+AGG - chr2.2:7142889-7142908 MS.gene074327:CDS 20.0%
!! GTATTTAATGATAAAAAACC+TGG + chr2.2:7140523-7140542 None:intergenic 20.0%
!! GTTTATGTGTATTATATTTC+GGG - chr2.2:7140225-7140244 MS.gene074327:CDS 20.0%
!! GTTTCTAATTATTCATAGAA+TGG - chr2.2:7143042-7143061 MS.gene074327:intron 20.0%
!! TAAAAATATGAGATTGATCA+TGG - chr2.2:7142762-7142781 MS.gene074327:intron 20.0%
!! TAATTATCGTTGAAATGAAA+TGG - chr2.2:7140066-7140085 MS.gene074327:intron 20.0%
!! TAGAAACTTCTAAATCAAAA+TGG - chr2.2:7142340-7142359 MS.gene074327:intron 20.0%
!! TTATTACATCCTACTTAATT+TGG + chr2.2:7142233-7142252 None:intergenic 20.0%
!! TTTATGTGTATTATATTTCG+GGG - chr2.2:7140226-7140245 MS.gene074327:CDS 20.0%
!!! AAAAAACATTTTTCATACAG+CGG + chr2.2:7143497-7143516 None:intergenic 20.0%
!!! AAATTATGAACATTTTTGGA+CGG + chr2.2:7142824-7142843 None:intergenic 20.0%
!!! AATTATTCACTAGGATTTTA+TGG - chr2.2:7142663-7142682 MS.gene074327:CDS 20.0%
! AAAACCTGGGATAAAATTAT+AGG + chr2.2:7140509-7140528 None:intergenic 25.0%
! AAAATATCTTTCAAACTTGG+AGG + chr2.2:7142491-7142510 None:intergenic 25.0%
! AACATCTTATTACATGTCTT+AGG - chr2.2:7141747-7141766 MS.gene074327:intron 25.0%
! ACATCTTATTACATGTCTTA+GGG - chr2.2:7141748-7141767 MS.gene074327:intron 25.0%
! CAAAGAATTCAAGTAAGATT+TGG + chr2.2:7141060-7141079 None:intergenic 25.0%
! CAAATCTTACTTGAATTCTT+TGG - chr2.2:7141058-7141077 MS.gene074327:intron 25.0%
! CATCTTTAGATTTCTGAATA+AGG + chr2.2:7139615-7139634 None:intergenic 25.0%
! CTTATTCAGAAATCTAAAGA+TGG - chr2.2:7139613-7139632 MS.gene074327:CDS 25.0%
! GAAACTAAAAACAAGAAAAG+CGG + chr2.2:7143027-7143046 None:intergenic 25.0%
! GGACACTAAATATGATAAAA+CGG - chr2.2:7141977-7141996 MS.gene074327:CDS 25.0%
! TGATGAAGATACATAGTTAA+TGG - chr2.2:7143285-7143304 MS.gene074327:CDS 25.0%
! TGGTAAATCATACATCAATT+GGG - chr2.2:7140671-7140690 MS.gene074327:CDS 25.0%
! TTATGTGTATTATATTTCGG+GGG - chr2.2:7140227-7140246 MS.gene074327:CDS 25.0%
! TTTGTTTGTCCAAATTAAGT+AGG - chr2.2:7142221-7142240 MS.gene074327:CDS 25.0%
!! AATGACAGGTATCTTTTATT+TGG - chr2.2:7141081-7141100 MS.gene074327:intron 25.0%
!! TAAGATTTTTCTTTTCCAGA+AGG + chr2.2:7140838-7140857 None:intergenic 25.0%
!! TATGTCTACGTTAATTGTTT+TGG - chr2.2:7140789-7140808 MS.gene074327:intron 25.0%
!! TTAATTCTTTTGATACAGGT+TGG - chr2.2:7143310-7143329 MS.gene074327:intron 25.0%
!! TTTTGTAACTAAAACTCATC+TGG - chr2.2:7141780-7141799 MS.gene074327:intron 25.0%
!! TTTTTGCAGTATGATTTTGA+TGG - chr2.2:7140090-7140109 MS.gene074327:intron 25.0%
!!! ACGTTAATTGTTTTGGTTTA+TGG - chr2.2:7140796-7140815 MS.gene074327:intron 25.0%
!!! ATATTGAAAGCTTTGAAGAA+TGG - chr2.2:7143180-7143199 MS.gene074327:intron 25.0%
!!! ATCTTTTAAGATTCTTTCTC+TGG - chr2.2:7141810-7141829 MS.gene074327:intron 25.0%
!!! TCATGGACTTTTATTTTTCA+AGG - chr2.2:7142779-7142798 MS.gene074327:intron 25.0%
!!! TTTTGCAGTATGATTTTGAT+GGG - chr2.2:7140091-7140110 MS.gene074327:intron 25.0%
AACTGACAATGAACCATTTA+AGG - chr2.2:7140332-7140351 MS.gene074327:intron 30.0%
AACTTACATGAACCTGTTAA+AGG - chr2.2:7139670-7139689 MS.gene074327:CDS 30.0%
AAGCAACTTAACACAAATGA+AGG + chr2.2:7142102-7142121 None:intergenic 30.0%
AATAAACCATCTATACCTCT+AGG + chr2.2:7141706-7141725 None:intergenic 30.0%
ACAAATAAGAGAAAACACCT+TGG + chr2.2:7142206-7142225 None:intergenic 30.0%
AGAAAAACCTAAGCTTAATG+TGG - chr2.2:7142930-7142949 MS.gene074327:CDS 30.0%
AGCTTATAGTAGATCATGTT+TGG + chr2.2:7140032-7140051 None:intergenic 30.0%
ATCATATTTAGTGTCCATGT+TGG + chr2.2:7141973-7141992 None:intergenic 30.0%
ATCGAGAAATACAGAATCAT+CGG + chr2.2:7142520-7142539 None:intergenic 30.0%
ATGAAGATTAATACCTGCAA+TGG - chr2.2:7140902-7140921 MS.gene074327:intron 30.0%
ATGTAAGTTCCAGAAAACAT+AGG + chr2.2:7139659-7139678 None:intergenic 30.0%
ATGTAGAAGAGAAATTACAC+TGG - chr2.2:7141530-7141549 MS.gene074327:CDS 30.0%
ATTACCTTGTACCAAATCAA+TGG + chr2.2:7143415-7143434 None:intergenic 30.0%
ATTCAGAAATCTAAAGATGG+AGG - chr2.2:7139616-7139635 MS.gene074327:CDS 30.0%
CAAAACATGAAACTTACGAT+TGG + chr2.2:7140768-7140787 None:intergenic 30.0%
CTAATACAAAGCCAAAAATG+TGG - chr2.2:7140954-7140973 MS.gene074327:CDS 30.0%
CTGGTAAATCATACATCAAT+TGG - chr2.2:7140670-7140689 MS.gene074327:CDS 30.0%
CTTCAAAGCTTTCAATATCA+CGG + chr2.2:7143178-7143197 None:intergenic 30.0%
CTTCTAAATCAAAATGGAGT+TGG - chr2.2:7142346-7142365 MS.gene074327:intron 30.0%
CTTGTATTGTTTGAGGAAAA+TGG - chr2.2:7143897-7143916 MS.gene074327:intron 30.0%
GAAAGTTAACCTACCTTAAA+TGG + chr2.2:7140348-7140367 None:intergenic 30.0%
GAGATTACCTGATTATGATT+AGG + chr2.2:7144071-7144090 None:intergenic 30.0%
GATAAAACGGTAAATTTCAG+TGG - chr2.2:7141990-7142009 MS.gene074327:CDS 30.0%
GATGATATATTGTCAAAGAC+TGG - chr2.2:7142396-7142415 MS.gene074327:intron 30.0%
GATTTCAATATGAAGGTTGA+AGG + chr2.2:7141418-7141437 None:intergenic 30.0%
GGGAAAATATCTTTCAAACT+TGG + chr2.2:7142494-7142513 None:intergenic 30.0%
GTAATTAGAGAAATCATTGG+AGG + chr2.2:7143074-7143093 None:intergenic 30.0%
GTAGCAAAAGATATTTGTGT+TGG + chr2.2:7143930-7143949 None:intergenic 30.0%
GTTTCCCTTGATATAAGTTA+TGG - chr2.2:7143452-7143471 MS.gene074327:CDS 30.0%
TAAATGGTTCATTGTCAGTT+CGG + chr2.2:7140332-7140351 None:intergenic 30.0%
TAACAAATTAGCAAGGTAAC+AGG + chr2.2:7144209-7144228 None:intergenic 30.0%
TAATGCAACATGTATGTCAT+TGG + chr2.2:7143528-7143547 None:intergenic 30.0%
TCTATGATCATAATCCACAT+TGG + chr2.2:7139416-7139435 None:intergenic 30.0%
TGAACCATAACAAATTAGCA+AGG + chr2.2:7144216-7144235 None:intergenic 30.0%
TGTAATGCTTAATACTGCAA+AGG - chr2.2:7142067-7142086 MS.gene074327:intron 30.0%
TTAGATTTCTGAATAAGGTC+TGG + chr2.2:7139610-7139629 None:intergenic 30.0%
TTCAAAGCTTTCAATATCAC+GGG + chr2.2:7143177-7143196 None:intergenic 30.0%
TTCCATTCAGAACAAACATA+TGG + chr2.2:7140186-7140205 None:intergenic 30.0%
TTGCATTTATTCATGTGTGA+AGG - chr2.2:7139753-7139772 MS.gene074327:intron 30.0%
! AAATCAATGGTTGGTTCTTA+GGG + chr2.2:7143402-7143421 None:intergenic 30.0%
! CAAAAATGTGGACTGAAAAT+TGG - chr2.2:7140966-7140985 MS.gene074327:CDS 30.0%
! CAATTTTCAGTCCACATTTT+TGG + chr2.2:7140968-7140987 None:intergenic 30.0%
! CATTTGAGTTTCAATAACAC+AGG + chr2.2:7142716-7142735 None:intergenic 30.0%
! GGAGTTAATTCTTTTGATAC+AGG - chr2.2:7143306-7143325 MS.gene074327:CDS 30.0%
! TCATTGAAACCTATGTTTTC+TGG - chr2.2:7139647-7139666 MS.gene074327:CDS 30.0%
! TCTTTTACTATTTAAACCGC+AGG - chr2.2:7141905-7141924 MS.gene074327:CDS 30.0%
! TTTGTTCTGAATGGAACTAT+GGG - chr2.2:7140190-7140209 MS.gene074327:CDS 30.0%
!! GTTACCTTGCTAATTTGTTA+TGG - chr2.2:7144209-7144228 MS.gene074327:CDS 30.0%
!! TGACATTTGGTTTGAGTAAA+AGG + chr2.2:7143711-7143730 None:intergenic 30.0%
!! TTGTAAAGAAGGTGTTTATC+TGG - chr2.2:7144180-7144199 MS.gene074327:CDS 30.0%
!! TTTGGCTTTGTATTAGAGTT+TGG + chr2.2:7140950-7140969 None:intergenic 30.0%
!! TTTTCAAGGAGAATTCATCA+TGG - chr2.2:7142793-7142812 MS.gene074327:intron 30.0%
!!! GTTTTGGTTTATGGTTTACT+AGG - chr2.2:7140805-7140824 MS.gene074327:intron 30.0%
!!! TTTTGTTGTTGTTACAGATG+TGG - chr2.2:7139584-7139603 MS.gene074327:CDS 30.0%
AAAGCATGACTGAACAAGTT+TGG - chr2.2:7139842-7139861 MS.gene074327:intron 35.0%
AAATACAGAATCATCGGTCA+GGG + chr2.2:7142514-7142533 None:intergenic 35.0%
AACAAACATATGGACCAATC+CGG + chr2.2:7140176-7140195 None:intergenic 35.0%
AACAATGTATTGCACCAATG+TGG - chr2.2:7139399-7139418 MS.gene074327:CDS 35.0%
AACACTTACAATGTCTGTGA+TGG + chr2.2:7143750-7143769 None:intergenic 35.0%
AATGCGATGCTGAAAGAAAA+TGG + chr2.2:7139735-7139754 None:intergenic 35.0%
AATGCTTAATACTGCAAAGG+TGG - chr2.2:7142070-7142089 MS.gene074327:intron 35.0%
ACATTGGTGCAATACATTGT+TGG + chr2.2:7139400-7139419 None:intergenic 35.0%
ACCAAATGTCACATGAATTG+TGG - chr2.2:7143720-7143739 MS.gene074327:intron 35.0%
ACGGAAAAATTGTCTCTAAG+AGG - chr2.2:7141251-7141270 MS.gene074327:CDS 35.0%
ACTACTTGTGGTACTCATTA+AGG - chr2.2:7142457-7142476 MS.gene074327:CDS 35.0%
AGAGACATATATACAACCTG+TGG + chr2.2:7139505-7139524 None:intergenic 35.0%
AGCATTACATTCTTGCAATC+TGG + chr2.2:7142056-7142075 None:intergenic 35.0%
ATGAAACTTACGATTGGATC+AGG + chr2.2:7140762-7140781 None:intergenic 35.0%
ATGCTTAATACTGCAAAGGT+GGG - chr2.2:7142071-7142090 MS.gene074327:intron 35.0%
ATGGAACTATGGGTAAAGTT+TGG - chr2.2:7140200-7140219 MS.gene074327:CDS 35.0%
CAACACTCTTGTATTGTTTG+AGG - chr2.2:7143890-7143909 MS.gene074327:intron 35.0%
CAAGTGTCCTAATCATAATC+AGG - chr2.2:7144061-7144080 MS.gene074327:intron 35.0%
CCATATGCATATCAGAACTA+TGG - chr2.2:7143114-7143133 MS.gene074327:CDS 35.0%
CTTGCAGGTAATTATTCACT+AGG - chr2.2:7142654-7142673 MS.gene074327:CDS 35.0%
GAACTTGTGAACAATATTCC+AGG + chr2.2:7141207-7141226 None:intergenic 35.0%
GAGAAATTACACTGGACAAT+TGG - chr2.2:7141538-7141557 MS.gene074327:CDS 35.0%
GATTGATCTATCTATAGCCA+AGG - chr2.2:7142186-7142205 MS.gene074327:intron 35.0%
GGATTATGATCATAGAGCAT+TGG - chr2.2:7139420-7139439 MS.gene074327:CDS 35.0%
GGTTCACTATATGTTGAGTA+TGG - chr2.2:7144230-7144249 MS.gene074327:CDS 35.0%
GTATTGTTTGAGGAAAATGG+CGG - chr2.2:7143900-7143919 MS.gene074327:intron 35.0%
GTCATACCATACTCATCAAT+CGG + chr2.2:7141394-7141413 None:intergenic 35.0%
TACATGCTGCAGGAATTATT+AGG - chr2.2:7141579-7141598 MS.gene074327:CDS 35.0%
TACCAGTGTTGTATTTGTGA+CGG + chr2.2:7141458-7141477 None:intergenic 35.0%
TACTATATGGTATTGCAACC+TGG - chr2.2:7141186-7141205 MS.gene074327:CDS 35.0%
TCATCTTAAAGATGTGCACA+AGG - chr2.2:7141616-7141635 MS.gene074327:CDS 35.0%
TCCACAATTCATGTGACATT+TGG + chr2.2:7143724-7143743 None:intergenic 35.0%
TCCATCAAATTTGCAAGCTA+TGG - chr2.2:7144092-7144111 MS.gene074327:intron 35.0%
TGCCAGATTGAAAATGAGTA+TGG - chr2.2:7140621-7140640 MS.gene074327:CDS 35.0%
TGCTTCTTCACAAAGCTTTA+TGG + chr2.2:7141642-7141661 None:intergenic 35.0%
TTCCAGAAAGAACTGTGATT+GGG + chr2.2:7142960-7142979 None:intergenic 35.0%
TTGAAACTCAAATGAAGTCG+AGG - chr2.2:7142722-7142741 MS.gene074327:intron 35.0%
TTTACTATTTAAACCGCAGG+CGG - chr2.2:7141908-7141927 MS.gene074327:CDS 35.0%
TTTCCAGAAAGAACTGTGAT+TGG + chr2.2:7142961-7142980 None:intergenic 35.0%
TTTGGGGAACTAACTAGATT+AGG - chr2.2:7141873-7141892 MS.gene074327:intron 35.0%
! AAATTGTGTTGGTCATGCTT+TGG - chr2.2:7139368-7139387 MS.gene074327:CDS 35.0%
! AGGACCTATAATTTTATCCC+AGG - chr2.2:7140502-7140521 MS.gene074327:intron 35.0%
! ATTTTTCTTTTCCAGAAGGC+AGG + chr2.2:7140834-7140853 None:intergenic 35.0%
! CAAATCAATGGTTGGTTCTT+AGG + chr2.2:7143403-7143422 None:intergenic 35.0%
! CTAAGAACCAACCATTGATT+TGG - chr2.2:7143401-7143420 MS.gene074327:intron 35.0%
! CTCCATACTCATTTTCAATC+TGG + chr2.2:7140626-7140645 None:intergenic 35.0%
! CTTAGGTTTTTCTTTGTTCC+CGG + chr2.2:7142923-7142942 None:intergenic 35.0%
! GACAATGAACCATTTAAGGT+AGG - chr2.2:7140336-7140355 MS.gene074327:intron 35.0%
! GCATTTGAAGCAACATATGT+AGG + chr2.2:7143657-7143676 None:intergenic 35.0%
! GTCCATATGTTTGTTCTGAA+TGG - chr2.2:7140181-7140200 MS.gene074327:intron 35.0%
! GTTTGTTCTGAATGGAACTA+TGG - chr2.2:7140189-7140208 MS.gene074327:CDS 35.0%
! TCCATAGCTTGCAAATTTGA+TGG + chr2.2:7144096-7144115 None:intergenic 35.0%
! TCCGTTTATGAAAGCATGAA+GGG + chr2.2:7142631-7142650 None:intergenic 35.0%
! TCGTAACTTGTAGCAATGAA+TGG + chr2.2:7141361-7141380 None:intergenic 35.0%
! TTCCGTTTATGAAAGCATGA+AGG + chr2.2:7142632-7142651 None:intergenic 35.0%
!! AGGTATCTTTTATTTGGTGG+TGG - chr2.2:7141087-7141106 MS.gene074327:intron 35.0%
!! CCATAGTTCTGATATGCATA+TGG + chr2.2:7143117-7143136 None:intergenic 35.0%
!! CTTGAATTCTTTGGAATGAC+AGG - chr2.2:7141067-7141086 MS.gene074327:intron 35.0%
!! GACAGGTATCTTTTATTTGG+TGG - chr2.2:7141084-7141103 MS.gene074327:intron 35.0%
!! GGTATCTTTTATTTGGTGGT+GGG - chr2.2:7141088-7141107 MS.gene074327:intron 35.0%
!!! AATACAAGAGTGTTGCCTTT+TGG + chr2.2:7143885-7143904 None:intergenic 35.0%
!!! ATGGAGCTTTTTTTGACACA+TGG - chr2.2:7143133-7143152 MS.gene074327:CDS 35.0%
!!! CTTTTGAAGCGTTGATCTTA+AGG - chr2.2:7142557-7142576 MS.gene074327:intron 35.0%
!!! TGGAGCTTTTTTTGACACAT+GGG - chr2.2:7143134-7143153 MS.gene074327:CDS 35.0%
AAACGTAGGGTCTTGATTTC+TGG - chr2.2:7139454-7139473 MS.gene074327:CDS 40.0%
AAACTGTATGCATCACAAGG+AGG - chr2.2:7140482-7140501 MS.gene074327:intron 40.0%
AACCAAGATACAGAATCAGG+GGG - chr2.2:7144014-7144033 MS.gene074327:intron 40.0%
AATTATTAGGCAGCCGAAGT+GGG - chr2.2:7141592-7141611 MS.gene074327:CDS 40.0%
AATTCTTAGGGAGTCAAACC+GGG - chr2.2:7142902-7142921 MS.gene074327:CDS 40.0%
ACAAACTTTGATGCTCCATC+CGG - chr2.2:7143549-7143568 MS.gene074327:intron 40.0%
ACAGTTTCTCTTGCTTCATG+AGG + chr2.2:7140469-7140488 None:intergenic 40.0%
ACCATCTATACCTCTAGGTT+TGG + chr2.2:7141701-7141720 None:intergenic 40.0%
AGTCAATCGCAACTGGATTA+CGG + chr2.2:7143575-7143594 None:intergenic 40.0%
AGTTGGATAAACGAACCTGT+GGG - chr2.2:7142363-7142382 MS.gene074327:intron 40.0%
ATCCCAATCACAGTTCTTTC+TGG - chr2.2:7142955-7142974 MS.gene074327:CDS 40.0%
ATCGCAGTAAAATCCATTGC+AGG + chr2.2:7140918-7140937 None:intergenic 40.0%
ATGGCTACATCTCTTGATAC+AGG - chr2.2:7140702-7140721 MS.gene074327:intron 40.0%
ATGTTGCCACAACCACTATT+TGG - chr2.2:7141855-7141874 MS.gene074327:intron 40.0%
CATCAATTGGGCAGCAAAAA+TGG - chr2.2:7140683-7140702 MS.gene074327:CDS 40.0%
CATGACCAACACAATTTCAG+TGG + chr2.2:7139365-7139384 None:intergenic 40.0%
CCTTGTACCAAATCAATGGT+TGG + chr2.2:7143411-7143430 None:intergenic 40.0%
CTAGTTAGTTCCCCAAATAG+TGG + chr2.2:7141870-7141889 None:intergenic 40.0%
CTGATAGAAGTGACTACTTG+TGG - chr2.2:7142445-7142464 MS.gene074327:CDS 40.0%
GAAAAGTTTGCATTGCTTGC+AGG - chr2.2:7139775-7139794 MS.gene074327:intron 40.0%
GAAATACAGAATCATCGGTC+AGG + chr2.2:7142515-7142534 None:intergenic 40.0%
GAAATGAAGCAAAGAGAACC+TGG + chr2.2:7139696-7139715 None:intergenic 40.0%
GAACCAAGATACAGAATCAG+GGG - chr2.2:7144013-7144032 MS.gene074327:intron 40.0%
GAATGAAGTGAAGCCAAAGA+GGG + chr2.2:7140296-7140315 None:intergenic 40.0%
GAATTCTTAGGGAGTCAAAC+CGG - chr2.2:7142901-7142920 MS.gene074327:CDS 40.0%
GAGAAACTGTATGCATCACA+AGG - chr2.2:7140479-7140498 MS.gene074327:intron 40.0%
GAGTTTAACAGTTGGACTTC+AGG - chr2.2:7142999-7143018 MS.gene074327:intron 40.0%
GATCTGCTGAGTTTAACAGT+TGG - chr2.2:7142991-7143010 MS.gene074327:intron 40.0%
GCCCTTCATGCTTTCATAAA+CGG - chr2.2:7142627-7142646 MS.gene074327:CDS 40.0%
GGAACCAAGATACAGAATCA+GGG - chr2.2:7144012-7144031 MS.gene074327:intron 40.0%
GGCCTAAAAGGTGAAGATTT+AGG - chr2.2:7143331-7143350 MS.gene074327:intron 40.0%
GGCGCTATCAATTGTAAAGA+AGG - chr2.2:7144169-7144188 MS.gene074327:CDS 40.0%
GGTGAAATTTGTGAAAGCAG+TGG - chr2.2:7140125-7140144 MS.gene074327:intron 40.0%
GTTGATCTTAAGGATGATCC+TGG - chr2.2:7142567-7142586 MS.gene074327:intron 40.0%
TCTTGATACAGGTGTTCCTT+GGG - chr2.2:7140713-7140732 MS.gene074327:intron 40.0%
TGACAGGAAACTTTGTCTTC+AGG - chr2.2:7140409-7140428 MS.gene074327:CDS 40.0%
TGATTTACCAGCAGAACCAT+AGG + chr2.2:7140661-7140680 None:intergenic 40.0%
TGGAACCAAGATACAGAATC+AGG - chr2.2:7144011-7144030 MS.gene074327:intron 40.0%
TGGGTAAATGGACAAAGCAT+TGG - chr2.2:7143621-7143640 MS.gene074327:intron 40.0%
TGGTGCAATACATTGTTGGT+AGG + chr2.2:7139396-7139415 None:intergenic 40.0%
TGTTGCCACAACCACTATTT+GGG - chr2.2:7141856-7141875 MS.gene074327:intron 40.0%
TTCATAAACGGAAAGCTTGC+AGG - chr2.2:7142639-7142658 MS.gene074327:CDS 40.0%
! GGACTTTAACTTCTTGACAG+TGG - chr2.2:7140267-7140286 MS.gene074327:CDS 40.0%
! GGGTAAATGGACAAAGCATT+GGG - chr2.2:7143622-7143641 MS.gene074327:intron 40.0%
! GGTCATTGATGGTAAACGTA+GGG - chr2.2:7139441-7139460 MS.gene074327:CDS 40.0%
! TCCAAACCTAGAGGTATAGA+TGG - chr2.2:7141697-7141716 MS.gene074327:intron 40.0%
! TGGTCATTGATGGTAAACGT+AGG - chr2.2:7139440-7139459 MS.gene074327:CDS 40.0%
! TTATGAAAGCATGAAGGGCA+TGG + chr2.2:7142626-7142645 None:intergenic 40.0%
! TTTGAAATGTTCCACCTCGT+TGG + chr2.2:7141164-7141183 None:intergenic 40.0%
! TTTGGCTTCACTTCATTCCA+GGG - chr2.2:7140298-7140317 MS.gene074327:intron 40.0%
! TTTGGTTTCAAAAACGACCG+TGG + chr2.2:7143867-7143886 None:intergenic 40.0%
! TTTTGATGGGAGGAAGGATT+TGG - chr2.2:7140104-7140123 MS.gene074327:intron 40.0%
!! CATAGAGCATTGGTCATTGA+TGG - chr2.2:7139430-7139449 MS.gene074327:CDS 40.0%
!! CCAACCATTGATTTGGTACA+AGG - chr2.2:7143408-7143427 MS.gene074327:CDS 40.0%
!! GTATGATTTTGATGGGAGGA+AGG - chr2.2:7140098-7140117 MS.gene074327:intron 40.0%
!! TCTTTAAGATGACCCCACTT+CGG + chr2.2:7141608-7141627 None:intergenic 40.0%
!! TGCAGTATGATTTTGATGGG+AGG - chr2.2:7140094-7140113 MS.gene074327:intron 40.0%
!! TTGATACAGGTTGGCCTAAA+AGG - chr2.2:7143319-7143338 MS.gene074327:intron 40.0%
!!! CGGTCGTTTTTGAAACCAAA+AGG - chr2.2:7143867-7143886 MS.gene074327:intron 40.0%
!!! GGAGCTTTTTTTGACACATG+GGG - chr2.2:7143135-7143154 MS.gene074327:CDS 40.0%
!!! TTTTTTTGACACATGGGGAG+CGG - chr2.2:7143140-7143159 MS.gene074327:CDS 40.0%
AAACATATGGACCAATCCGG+AGG + chr2.2:7140173-7140192 None:intergenic 45.0%
AAAGGTGAGGCTTGGGTAAA+TGG - chr2.2:7143609-7143628 MS.gene074327:intron 45.0%
AAGATGCTAACAGACCATGC+AGG + chr2.2:7142032-7142051 None:intergenic 45.0%
AAGCTATGGAACACCACTAG+GGG - chr2.2:7144106-7144125 MS.gene074327:intron 45.0%
ACACTCTTGATCTCTCCTCT+CGG - chr2.2:7143208-7143227 MS.gene074327:intron 45.0%
ACAGAATCAGGGGGAAAGAT+AGG - chr2.2:7144023-7144042 MS.gene074327:intron 45.0%
ACAGACTCATGCAACTACAG+AGG - chr2.2:7143684-7143703 MS.gene074327:intron 45.0%
ACATGAACCTGTTAAAGGCC+AGG - chr2.2:7139675-7139694 MS.gene074327:CDS 45.0%
ACCAACTTTGACCGAAGTAC+TGG - chr2.2:7141331-7141350 MS.gene074327:intron 45.0%
AGCCGTCACAAATACAACAC+TGG - chr2.2:7141453-7141472 MS.gene074327:intron 45.0%
AGTTCCCCAAATAGTGGTTG+TGG + chr2.2:7141864-7141883 None:intergenic 45.0%
ATATCTTCGCTACATGCTGC+AGG - chr2.2:7141569-7141588 MS.gene074327:CDS 45.0%
ATTATTAGGCAGCCGAAGTG+GGG - chr2.2:7141593-7141612 MS.gene074327:CDS 45.0%
ATTCCTATCACTTGCCTGCA+TGG - chr2.2:7142015-7142034 MS.gene074327:intron 45.0%
ATTTGTGAAAGCAGTGGCTG+AGG - chr2.2:7140131-7140150 MS.gene074327:intron 45.0%
CAAGCTATGGAACACCACTA+GGG - chr2.2:7144105-7144124 MS.gene074327:intron 45.0%
CAGAATCAGGGGGAAAGATA+GGG - chr2.2:7144024-7144043 MS.gene074327:intron 45.0%
CATGAGGTCGACAATCTTAG+TGG + chr2.2:7140453-7140472 None:intergenic 45.0%
CCTGCTCAAAAACAGTACCA+TGG - chr2.2:7141304-7141323 MS.gene074327:CDS 45.0%
CTCTTGATACAGGTGTTCCT+TGG - chr2.2:7140712-7140731 MS.gene074327:intron 45.0%
GAACCCAAGATTACTTCTCC+TGG - chr2.2:7141674-7141693 MS.gene074327:intron 45.0%
GAATTATTAGGCAGCCGAAG+TGG - chr2.2:7141591-7141610 MS.gene074327:CDS 45.0%
GAGAGCCACTGAAATTGTGT+TGG - chr2.2:7139357-7139376 MS.gene074327:CDS 45.0%
GAGTTGGATAAACGAACCTG+TGG - chr2.2:7142362-7142381 MS.gene074327:intron 45.0%
GCAACATTGCACTCAATGCA+GGG + chr2.2:7141842-7141861 None:intergenic 45.0%
GCTCAAAAACAGTACCATGG+AGG - chr2.2:7141307-7141326 MS.gene074327:CDS 45.0%
GGAATGAAGTGAAGCCAAAG+AGG + chr2.2:7140297-7140316 None:intergenic 45.0%
GGACCAGGAGAAGTAATCTT+GGG + chr2.2:7141680-7141699 None:intergenic 45.0%
GGACTGAAAATTGGAGTGCA+TGG - chr2.2:7140975-7140994 MS.gene074327:CDS 45.0%
GGGATGTCCACATTAAGCTT+AGG + chr2.2:7142940-7142959 None:intergenic 45.0%
GTCCTTCACATTGAATCGCT+TGG - chr2.2:7142600-7142619 MS.gene074327:intron 45.0%
GTTGCATGAGTCTGTGCAAT+CGG + chr2.2:7143679-7143698 None:intergenic 45.0%
GTTGCCACAACCACTATTTG+GGG - chr2.2:7141857-7141876 MS.gene074327:intron 45.0%
TATACCTCTAGGTTTGGACC+AGG + chr2.2:7141695-7141714 None:intergenic 45.0%
TCAGTTCGGAACTTAATCCC+TGG + chr2.2:7140318-7140337 None:intergenic 45.0%
TCATCCTTCGAAATACCCAC+AGG + chr2.2:7142381-7142400 None:intergenic 45.0%
TGAAGGACAGTTTGAGAACC+AGG + chr2.2:7142588-7142607 None:intergenic 45.0%
TGGACCAGGAGAAGTAATCT+TGG + chr2.2:7141681-7141700 None:intergenic 45.0%
TGGTTCCACGAGTCTATTTG+AGG + chr2.2:7143999-7144018 None:intergenic 45.0%
TGTCAAGTGAACTCAGTCCA+AGG + chr2.2:7140394-7140413 None:intergenic 45.0%
TTCCACGAGTCTATTTGAGG+TGG + chr2.2:7143996-7144015 None:intergenic 45.0%
TTCCCCCTGATTCTGTATCT+TGG + chr2.2:7144019-7144038 None:intergenic 45.0%
TTGACAGTGGTTTCCCTCTT+TGG - chr2.2:7140280-7140299 MS.gene074327:intron 45.0%
TTGGACTGAGTTCACTTGAC+AGG - chr2.2:7140393-7140412 MS.gene074327:CDS 45.0%
! AAGAGAACCTGGCCTTTAAC+AGG + chr2.2:7139685-7139704 None:intergenic 45.0%
! AGGACAAAAGCATGAAGCAC+TGG + chr2.2:7140374-7140393 None:intergenic 45.0%
! CTTTGGCTTCACTTCATTCC+AGG - chr2.2:7140297-7140316 MS.gene074327:intron 45.0%
! GGGGTGTTCATGTCTAATTG+AGG - chr2.2:7140246-7140265 MS.gene074327:CDS 45.0%
! GTGCTTCATGCTTTTGTCCT+TGG - chr2.2:7140374-7140393 MS.gene074327:CDS 45.0%
! TCCACGAGTCTATTTGAGGT+GGG + chr2.2:7143995-7144014 None:intergenic 45.0%
! TCCAGTTGCGATTGACTTCA+CGG - chr2.2:7143578-7143597 MS.gene074327:intron 45.0%
!! AACTTTGACCGAAGTACTGG+CGG - chr2.2:7141334-7141353 MS.gene074327:intron 45.0%
!! GATGCACCGATTGATGAGTA+TGG - chr2.2:7141385-7141404 MS.gene074327:intron 45.0%
!! GGAGACATTGATTCAGCCTA+TGG - chr2.2:7140642-7140661 MS.gene074327:CDS 45.0%
!!! CCATGGTACTGTTTTTGAGC+AGG + chr2.2:7141307-7141326 None:intergenic 45.0%
!!! TTTTTTGACACATGGGGAGC+GGG - chr2.2:7143141-7143160 MS.gene074327:CDS 45.0%
!!! TAAAAATAATTTTTTTTTTG+TGG - chr2.2:7142250-7142269 MS.gene074327:CDS 5.0%
AATCGCAACTGGATTACGGC+CGG + chr2.2:7143571-7143590 None:intergenic 50.0%
ACCCACCTCAAATAGACTCG+TGG - chr2.2:7143991-7144010 MS.gene074327:CDS 50.0%
AGACCATGCAGGCAAGTGAT+AGG + chr2.2:7142021-7142040 None:intergenic 50.0%
AGATCTTCCACAGGTCTGTG+AGG + chr2.2:7141117-7141136 None:intergenic 50.0%
AGTGTCCATGTTGGCGAGAA+AGG + chr2.2:7141964-7141983 None:intergenic 50.0%
CAGGCGGCAGTTTATAAGAC+AGG - chr2.2:7141924-7141943 MS.gene074327:CDS 50.0%
CAGGTCTATTTGTGCACCTC+CGG - chr2.2:7140154-7140173 MS.gene074327:intron 50.0%
CGAACCTGTGGGTATTTCGA+AGG - chr2.2:7142374-7142393 MS.gene074327:intron 50.0%
CTATTTGTGCACCTCCGGAT+TGG - chr2.2:7140159-7140178 MS.gene074327:intron 50.0%
CTCTCGGAAGTGGACATATC+AGG - chr2.2:7143224-7143243 MS.gene074327:intron 50.0%
CTGATATGTCCACTTCCGAG+AGG + chr2.2:7143226-7143245 None:intergenic 50.0%
GATGGGAAAAGGTGAGGCTT+GGG - chr2.2:7143602-7143621 MS.gene074327:intron 50.0%
GCAAATGCGAGATCTTCCAC+AGG + chr2.2:7141126-7141145 None:intergenic 50.0%
GCAAGCTATGGAACACCACT+AGG - chr2.2:7144104-7144123 MS.gene074327:intron 50.0%
GCACGTGGTATCTGTGAGAT+GGG + chr2.2:7143845-7143864 None:intergenic 50.0%
GCCAGTACTTCGGTCAAAGT+TGG + chr2.2:7141335-7141354 None:intergenic 50.0%
GGACACTTGAGCAACAGTTC+AGG + chr2.2:7144050-7144069 None:intergenic 50.0%
GGCAACATTGCACTCAATGC+AGG + chr2.2:7141843-7141862 None:intergenic 50.0%
GGCCAAGCGATTCAATGTGA+AGG + chr2.2:7142605-7142624 None:intergenic 50.0%
GTCTTATAAACTGCCGCCTG+CGG + chr2.2:7141924-7141943 None:intergenic 50.0%
TGAATGGTCCGCCAGTACTT+CGG + chr2.2:7141345-7141364 None:intergenic 50.0%
TTACTAGGTTGCCTGCCTTC+TGG - chr2.2:7140820-7140839 MS.gene074327:intron 50.0%
TTCTCCTGGTCCAAACCTAG+AGG - chr2.2:7141688-7141707 MS.gene074327:intron 50.0%
TTGATCTCTCCTCTCGGAAG+TGG - chr2.2:7143214-7143233 MS.gene074327:intron 50.0%
! ACAACCTGTGGAGTACTACG+AGG + chr2.2:7139493-7139512 None:intergenic 50.0%
! CAACCTGTGGAGTACTACGA+GGG + chr2.2:7139492-7139511 None:intergenic 50.0%
! CAGTTGCGATTGACTTCACG+GGG - chr2.2:7143580-7143599 MS.gene074327:intron 50.0%
! CCAGTTGCGATTGACTTCAC+GGG - chr2.2:7143579-7143598 MS.gene074327:intron 50.0%
! GATTCAGCCTATGGTTCTGC+TGG - chr2.2:7140651-7140670 MS.gene074327:CDS 50.0%
! GGTCAAAGTTGGTTCCTCCA+TGG + chr2.2:7141324-7141343 None:intergenic 50.0%
! TTTTTGACACATGGGGAGCG+GGG - chr2.2:7143142-7143161 MS.gene074327:CDS 50.0%
!! GACAAAGCATTGGGCGATAC+TGG - chr2.2:7143631-7143650 MS.gene074327:intron 50.0%
!!! GTTGCACGCTTTTTCCAACG+AGG - chr2.2:7141147-7141166 MS.gene074327:CDS 50.0%
AGTCTGCGAATTCCACGCTC+CGG + chr2.2:7143374-7143393 None:intergenic 55.0%
CCCGTGAAGTCAATCGCAAC+TGG + chr2.2:7143582-7143601 None:intergenic 55.0%
CTACCCTCGTAGTACTCCAC+AGG - chr2.2:7139486-7139505 MS.gene074327:CDS 55.0%
CTCACAGATACCACGTGCCA+CGG - chr2.2:7143847-7143866 MS.gene074327:intron 55.0%
GACTTCACGGGGATGGGAAA+AGG - chr2.2:7143591-7143610 MS.gene074327:intron 55.0%
GGATGGGAAAAGGTGAGGCT+TGG - chr2.2:7143601-7143620 MS.gene074327:intron 55.0%
GGCACGTGGTATCTGTGAGA+TGG + chr2.2:7143846-7143865 None:intergenic 55.0%
TCAAAAACGACCGTGGCACG+TGG + chr2.2:7143860-7143879 None:intergenic 55.0%
TGCTGCCTTTCTCGCCAACA+TGG - chr2.2:7141956-7141975 MS.gene074327:CDS 55.0%
TGGGTTTCCTCACAGACCTG+TGG - chr2.2:7141107-7141126 MS.gene074327:intron 55.0%
! GCGATTGACTTCACGGGGAT+GGG - chr2.2:7143585-7143604 MS.gene074327:intron 55.0%
! GCTTGCTGACACATGACCCA+AGG + chr2.2:7140732-7140751 None:intergenic 55.0%
! TGCGATTGACTTCACGGGGA+TGG - chr2.2:7143584-7143603 MS.gene074327:intron 55.0%
!!! GCACGCTTTTTCCAACGAGG+TGG - chr2.2:7141150-7141169 MS.gene074327:CDS 55.0%
AAGTTTCCGCACGCCCCTAG+TGG + chr2.2:7144122-7144141 None:intergenic 60.0%
CACGGGGATGGGAAAAGGTG+AGG - chr2.2:7143596-7143615 MS.gene074327:intron 60.0%
CGGACGCTGCAGCAGCAATA+AGG - chr2.2:7144148-7144167 MS.gene074327:CDS 60.0%
CTAGTGGAAGTTCCGGAGCG+TGG - chr2.2:7143359-7143378 MS.gene074327:intron 60.0%
GCAACTGGATTACGGCCGGA+TGG + chr2.2:7143567-7143586 None:intergenic 60.0%
GCGTGCGGAAACTTCTACCG+CGG - chr2.2:7144128-7144147 MS.gene074327:CDS 60.0%
GTGAAAGCAGTGGCTGAGGC+AGG - chr2.2:7140135-7140154 MS.gene074327:intron 60.0%
TATTGCTGCTGCAGCGTCCG+CGG + chr2.2:7144148-7144167 None:intergenic 60.0%
ACATGGGGAGCGGGGATCAC+TGG - chr2.2:7143150-7143169 MS.gene074327:CDS 65.0%
! GGAACACCACTAGGGGCGTG+CGG - chr2.2:7144113-7144132 MS.gene074327:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 7139355 7144259 7139355 ID=MS.gene074327
chr2.2 mRNA 7139355 7144259 7139355 ID=MS.gene074327.t1;Parent=MS.gene074327
chr2.2 exon 7144107 7144259 7144107 ID=MS.gene074327.t1.exon1;Parent=MS.gene074327.t1
chr2.2 CDS 7144107 7144259 7144107 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7143918 7144013 7143918 ID=MS.gene074327.t1.exon2;Parent=MS.gene074327.t1
chr2.2 CDS 7143918 7144013 7143918 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7143403 7143515 7143403 ID=MS.gene074327.t1.exon3;Parent=MS.gene074327.t1
chr2.2 CDS 7143403 7143515 7143403 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7143261 7143327 7143261 ID=MS.gene074327.t1.exon4;Parent=MS.gene074327.t1
chr2.2 CDS 7143261 7143327 7143261 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7143091 7143183 7143091 ID=MS.gene074327.t1.exon5;Parent=MS.gene074327.t1
chr2.2 CDS 7143091 7143183 7143091 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7142844 7142987 7142844 ID=MS.gene074327.t1.exon6;Parent=MS.gene074327.t1
chr2.2 CDS 7142844 7142987 7142844 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7142618 7142706 7142618 ID=MS.gene074327.t1.exon7;Parent=MS.gene074327.t1
chr2.2 CDS 7142618 7142706 7142618 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7142420 7142525 7142420 ID=MS.gene074327.t1.exon8;Parent=MS.gene074327.t1
chr2.2 CDS 7142420 7142525 7142420 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7142208 7142295 7142208 ID=MS.gene074327.t1.exon9;Parent=MS.gene074327.t1
chr2.2 CDS 7142208 7142295 7142208 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7141905 7142023 7141905 ID=MS.gene074327.t1.exon10;Parent=MS.gene074327.t1
chr2.2 CDS 7141905 7142023 7141905 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7141526 7141687 7141526 ID=MS.gene074327.t1.exon11;Parent=MS.gene074327.t1
chr2.2 CDS 7141526 7141687 7141526 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7141136 7141338 7141136 ID=MS.gene074327.t1.exon12;Parent=MS.gene074327.t1
chr2.2 CDS 7141136 7141338 7141136 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7140954 7141048 7140954 ID=MS.gene074327.t1.exon13;Parent=MS.gene074327.t1
chr2.2 CDS 7140954 7141048 7140954 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7140594 7140703 7140594 ID=MS.gene074327.t1.exon14;Parent=MS.gene074327.t1
chr2.2 CDS 7140594 7140703 7140594 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7140369 7140485 7140369 ID=MS.gene074327.t1.exon15;Parent=MS.gene074327.t1
chr2.2 CDS 7140369 7140485 7140369 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7140185 7140286 7140185 ID=MS.gene074327.t1.exon16;Parent=MS.gene074327.t1
chr2.2 CDS 7140185 7140286 7140185 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7139854 7140065 7139854 ID=MS.gene074327.t1.exon17;Parent=MS.gene074327.t1
chr2.2 CDS 7139854 7140065 7139854 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
chr2.2 exon 7139355 7139760 7139355 ID=MS.gene074327.t1.exon18;Parent=MS.gene074327.t1
chr2.2 CDS 7139355 7139760 7139355 ID=cds.MS.gene074327.t1;Parent=MS.gene074327.t1
Gene Sequence

>MS.gene074327

ATGAGAGCCACTGAAATTGTGTTGGTCATGCTTTGGTTCCTACCAACAATGTATTGCACCAATGTGGATTATGATCATAGAGCATTGGTCATTGATGGTAAACGTAGGGTCTTGATTTCTGGTTCTATTCACTACCCTCGTAGTACTCCACAGGTTGTATATATGTCTCTCTTTCATTCTGTTTGTGTGTTTTTGCATTGTATTTGATTTTAAACAGTGATGAATTTGTTTTTGTTGTTGTTACAGATGTGGCCAGACCTTATTCAGAAATCTAAAGATGGAGGACTTGATGTCATTGAAACCTATGTTTTCTGGAACTTACATGAACCTGTTAAAGGCCAGGTTCTCTTTGCTTCATTTCTTCTCTCACATTCTTACCATTTTCTTTCAGCATCGCATTGCATTTATTCATGTGTGAAGGAAAAGTTTGCATTGCTTGCAGGAAAAGAAAACAAGTGTCTATGTTAAGCTGAATTGCTAATTGTTGAAAGCATGACTGAACAAGTTTGGAATGACTTATTTGAGTTTATCTACTGACATAATCTCTCCAAGATAGATAATGAAACATATTAATTATATGAAAACAATATGACTTTCTATTATCTTTTGTAAATAGAATTATCTTATACATAATACATAAGCACTTATATGCTATAAGCACTTAATTATTTTATCCAAACATGATCTACTATAAGCTAAGAAAGACTATCTTAATTATCGTTGAAATGAAATGGATTTTTGCAGTATGATTTTGATGGGAGGAAGGATTTGGTGAAATTTGTGAAAGCAGTGGCTGAGGCAGGTCTATTTGTGCACCTCCGGATTGGTCCATATGTTTGTTCTGAATGGAACTATGGGTAAAGTTTGGTAGTTTATGTGTATTATATTTCGGGGGTGTTCATGTCTAATTGAGGACTTTAACTTCTTGACAGTGGTTTCCCTCTTTGGCTTCACTTCATTCCAGGGATTAAGTTCCGAACTGACAATGAACCATTTAAGGTAGGTTAACTTTCAGTCCAGTGCTTCATGCTTTTGTCCTTGGACTGAGTTCACTTGACAGGAAACTTTGTCTTCAGGCTGAAATGAAGCGATTCACCACTAAGATTGTCGACCTCATGAAGCAAGAGAAACTGTATGCATCACAAGGAGGACCTATAATTTTATCCCAGGTTTTTTATCATTAAATACAAGTATAGTTAATATATTTTTGAAGATATTAAGATCAAAGTTTATATTTGTTAATGTGAGAGTATTTGTGCTTTCTAATGCCAGATTGAAAATGAGTATGGAGACATTGATTCAGCCTATGGTTCTGCTGGTAAATCATACATCAATTGGGCAGCAAAAATGGCTACATCTCTTGATACAGGTGTTCCTTGGGTCATGTGTCAGCAAGCAGATGCTCCTGATCCAATCGTAAGTTTCATGTTTTGATATGTCTACGTTAATTGTTTTGGTTTATGGTTTACTAGGTTGCCTGCCTTCTGGAAAAGAAAAATCTTAGTATGCTATCTGCATTCATCTTACTTGATTTTTACTTTAACTGCATGAAGATTAATACCTGCAATGGATTTTACTGCGATCAATTCACACCAAACTCTAATACAAAGCCAAAAATGTGGACTGAAAATTGGAGTGCATGGTTAGCAACTATGCATTCTTTTTTATATAAATAATTTAATCGAATTGTTTTTGTTATTTTCCAAATCTTACTTGAATTCTTTGGAATGACAGGTATCTTTTATTTGGTGGTGGGTTTCCTCACAGACCTGTGGAAGATCTCGCATTTGCTGTTGCACGCTTTTTCCAACGAGGTGGAACATTTCAAAATTACTATATGGTATTGCAACCTGGAATATTGTTCACAAGTTCAATTTAATATGATAGTATTACTTCACGGAAAAATTGTCTCTAAGAGGAATTAGCTGATATTGTATAATTTTTTATTGCCTGCTCAAAAACAGTACCATGGAGGAACCAACTTTGACCGAAGTACTGGCGGACCATTCATTGCTACAAGTTACGATTTTGATGCACCGATTGATGAGTATGGTATGACTCCTTCAACCTTCATATTGAAATCTATTGTTCATGTTATAGCCGTCACAAATACAACACTGGTAATACATCGAAGAAGATAAATTGATAATATCACATGCATAGTTTATTTCTTATATGTAGAAGAGAAATTACACTGGACAATTGGATTTTTTAATATCTTCGCTACATGCTGCAGGAATTATTAGGCAGCCGAAGTGGGGTCATCTTAAAGATGTGCACAAGGCCATAAAGCTTTGTGAAGAAGCATTAATCGCTACAGAACCCAAGATTACTTCTCCTGGTCCAAACCTAGAGGTATAGATGGTTTATTTTGAAATTTTTGTTCGTTTGAAACATCTTATTACATGTCTTAGGGTATAATTTATTTTGTAACTAAAACTCATCTGGTTTGTCAATCTTTTAAGATTCTTTCTCTGGAAAATTCCCTGCATTGAGTGCAATGTTGCCACAACCACTATTTGGGGAACTAACTAGATTAGGTCTTAACAGTCTTTTACTATTTAAACCGCAGGCGGCAGTTTATAAGACAGGATCTGTATGTGCTGCCTTTCTCGCCAACATGGACACTAAATATGATAAAACGGTAAATTTCAGTGGCAATTCCTATCACTTGCCTGCATGGTCTGTTAGCATCTTACCAGATTGCAAGAATGTAATGCTTAATACTGCAAAGGTGGGTCATACCTTCATTTGTGTTAAGTTGCTTCAATAATGATGATTATTTCAGTCAAAATAGAGAGTTTAATTGAATAGAGTTGCTATAAAAGTGTGATTGATCTATCTATAGCCAAGGTGTTTTCTCTTATTTGTTTGTCCAAATTAAGTAGGATGTAATAAAAATAATTTTTTTTTTGTGGCAGCTTAATTCTGCATCTACAAATTCAAACTTCGTAACTCGATCTTCAAAAGAAGATATCAGTTCTTTAGAAACTTCTAAATCAAAATGGAGTTGGATAAACGAACCTGTGGGTATTTCGAAGGATGATATATTGTCAAAGACTGGATTACTTGAGCAAATAAATATCACAGCTGATAGAAGTGACTACTTGTGGTACTCATTAAGGTACACAAGCCTCCAAGTTTGAAAGATATTTTCCCTGACCGATGATTCTGTATTTCTCGATAACACTTCTATCGTATTCTTTTGAAGCGTTGATCTTAAGGATGATCCTGGTTCTCAAACTGTCCTTCACATTGAATCGCTTGGCCATGCCCTTCATGCTTTCATAAACGGAAAGCTTGCAGGTAATTATTCACTAGGATTTTATGGTTTTTATATTTTGAAAGTCTCTAAGAGCCTGTGTTATTGAAACTCAAATGAAGTCGAGGTTGATTTTAAAACAAGTTAAAAATATGAGATTGATCATGGACTTTTATTTTTCAAGGAGAATTCATCATGGATGTTCCGTCCAAAAATGTTCATAATTTATTGTTTCAATTAATTTCTTGAATTATTAAATAATAACTTTCTATGATATTATTGATGAATTCTTAGGGAGTCAAACCGGGAACAAAGAAAAACCTAAGCTTAATGTGGACATCCCAATCACAGTTCTTTCTGGAAAGAATAAAATTGATCTGCTGAGTTTAACAGTTGGACTTCAGGTTCCGCTTTTCTTGTTTTTAGTTTCTAATTATTCATAGAATGGTTTGCTCCTCCAATGATTTCTCTAATTACTATATCTAAGCTAACATGAACCATATGCATATCAGAACTATGGAGCTTTTTTTGACACATGGGGAGCGGGGATCACTGGTCCCGTGATATTGAAAGCTTTGAAGAATGGCAACAACACTCTTGATCTCTCCTCTCGGAAGTGGACATATCAGGTCAGTCTTCACTTTTGATCGAAGACTATTTATTAGTCTTGATGAAGATACATAGTTAATGGAGTTAATTCTTTTGATACAGGTTGGCCTAAAAGGTGAAGATTTAGGTCTCTCTAGTGGAAGTTCCGGAGCGTGGAATTCGCAGACTACTTTCCCTAAGAACCAACCATTGATTTGGTACAAGGTAATTTTATTTTCAATTTATTGTTTCCCTTGATATAAGTTATGGAATTTCAATAAAAAGAATGCCGCTGTATGAAAAATGTTTTTTGCTACTAACCAATGACATACATGTTGCATTAGACAAACTTTGATGCTCCATCCGGCCGTAATCCAGTTGCGATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAAAGCATTGGGCGATACTGGCCTACATATGTTGCTTCAAATGCCGATTGCACAGACTCATGCAACTACAGAGGACCTTTTACTCAAACCAAATGTCACATGAATTGTGGAAAACCATCACAGACATTGTAAGTGTTGCAAATTTTCAATGAAAAAGAGTTTAAACATGAGAAAAAAATCTTGATCTATGATGTGACTGAGACATTAATCCCATCTCACAGATACCACGTGCCACGGTCGTTTTTGAAACCAAAAGGCAACACTCTTGTATTGTTTGAGGAAAATGGCGGAGATCCAACACAAATATCTTTTGCTACAAAACAGCTAAAAAGTGTGTGTGCACATGTATCTGATTCTCACCCACCTCAAATAGACTCGTGGAACCAAGATACAGAATCAGGGGGAAAGATAGGGCCTGAACTGTTGCTCAAGTGTCCTAATCATAATCAGGTAATCTCTTCCATCAAATTTGCAAGCTATGGAACACCACTAGGGGCGTGCGGAAACTTCTACCGCGGACGCTGCAGCAGCAATAAGGCGCTATCAATTGTAAAGAAGGTGTTTATCTGGATTCCTGTTACCTTGCTAATTTGTTATGGTTCACTATATGTTGAGTATGGCTCATAG
Protein sequence

>MS.gene074327.t1

MRATEIVLVMLWFLPTMYCTNVDYDHRALVIDGKRRVLISGSIHYPRSTPQMWPDLIQKSKDGGLDVIETYVFWNLHEPVKGQYDFDGRKDLVKFVKAVAEAGLFVHLRIGPYVCSEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMKRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGDIDSAYGSAGKSYINWAAKMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSNTKPKMWTENWSAWYLLFGGGFPHRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRSTGGPFIATSYDFDAPIDEYGIIRQPKWGHLKDVHKAIKLCEEALIATEPKITSPGPNLEAAVYKTGSVCAAFLANMDTKYDKTVNFSGNSYHLPAWSVSILPDCKNVMLNTAKLNSASTNSNFVTRSSKEDISSLETSKSKWSWINEPVGISKDDILSKTGLLEQINITADRSDYLWYSLSVDLKDDPGSQTVLHIESLGHALHAFINGKLAGSQTGNKEKPKLNVDIPITVLSGKNKIDLLSLTVGLQNYGAFFDTWGAGITGPVILKALKNGNNTLDLSSRKWTYQVGLKGEDLGLSSGSSGAWNSQTTFPKNQPLIWYKTNFDAPSGRNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVASNADCTDSCNYRGPFTQTKCHMNCGKPSQTLYHVPRSFLKPKGNTLVLFEENGGDPTQISFATKQLKSVCAHVSDSHPPQIDSWNQDTESGGKIGPELLLKCPNHNQVISSIKFASYGTPLGACGNFYRGRCSSNKALSIVKKVFIWIPVTLLICYGSLYVEYGS