Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07728.t1 | XP_003595077.1 | 93 | 244 | 17 | 0 | 1 | 244 | 1 | 244 | 1.50E-118 | 435.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07728.t1 | Q2HIV9 | 60.8 | 245 | 87 | 5 | 1 | 241 | 1 | 240 | 1.3e-67 | 257.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07728.t1 | G7IG90 | 93.0 | 244 | 17 | 0 | 1 | 244 | 1 | 244 | 1.1e-118 | 435.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene07728.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053218 | MS.gene07728 | 0.809148 | 2.18E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07728.t1 | MTR_2g038040 | 93.033 | 244 | 17 | 0 | 1 | 244 | 1 | 244 | 9.54e-170 | 468 |
| MS.gene07728.t1 | MTR_8g064700 | 30.588 | 170 | 110 | 2 | 51 | 220 | 243 | 404 | 5.85e-22 | 94.0 |
| MS.gene07728.t1 | MTR_1g112680 | 32.911 | 237 | 128 | 7 | 6 | 213 | 258 | 492 | 1.27e-21 | 93.6 |
| MS.gene07728.t1 | MTR_3g030700 | 35.484 | 186 | 104 | 6 | 51 | 232 | 195 | 368 | 1.31e-20 | 89.7 |
| MS.gene07728.t1 | MTR_3g498695 | 30.526 | 190 | 119 | 4 | 48 | 232 | 294 | 475 | 8.92e-19 | 85.1 |
| MS.gene07728.t1 | MTR_3g498695 | 32.258 | 186 | 112 | 5 | 48 | 227 | 294 | 471 | 3.81e-18 | 83.2 |
| MS.gene07728.t1 | MTR_2g084280 | 28.796 | 191 | 113 | 4 | 51 | 236 | 132 | 304 | 5.37e-18 | 81.6 |
| MS.gene07728.t1 | MTR_7g083900 | 33.158 | 190 | 114 | 6 | 49 | 232 | 283 | 465 | 1.93e-17 | 81.3 |
| MS.gene07728.t1 | MTR_2g081040 | 31.579 | 190 | 111 | 6 | 51 | 232 | 176 | 354 | 4.49e-17 | 79.7 |
| MS.gene07728.t1 | MTR_4g057270 | 31.098 | 164 | 96 | 3 | 51 | 211 | 148 | 297 | 3.64e-16 | 77.0 |
| MS.gene07728.t1 | MTR_7g083900 | 32.984 | 191 | 114 | 7 | 49 | 232 | 283 | 466 | 4.28e-16 | 77.4 |
| MS.gene07728.t1 | MTR_3g104100 | 30.481 | 187 | 111 | 6 | 51 | 229 | 194 | 369 | 1.58e-15 | 75.5 |
| MS.gene07728.t1 | MTR_7g117670 | 60.000 | 55 | 22 | 0 | 53 | 107 | 403 | 457 | 3.75e-15 | 74.7 |
| MS.gene07728.t1 | MTR_5g030430 | 30.000 | 150 | 103 | 2 | 53 | 202 | 494 | 641 | 1.01e-14 | 73.6 |
| MS.gene07728.t1 | MTR_8g027495 | 55.932 | 59 | 26 | 0 | 53 | 111 | 459 | 517 | 1.04e-14 | 73.6 |
| MS.gene07728.t1 | MTR_4g091990 | 31.325 | 166 | 82 | 3 | 51 | 216 | 44 | 177 | 1.54e-14 | 70.5 |
| MS.gene07728.t1 | MTR_7g096350 | 29.714 | 175 | 86 | 4 | 53 | 227 | 356 | 493 | 2.53e-14 | 72.0 |
| MS.gene07728.t1 | MTR_8g067280 | 29.487 | 156 | 96 | 3 | 53 | 202 | 463 | 610 | 3.61e-14 | 72.0 |
| MS.gene07728.t1 | MTR_2g104560 | 23.636 | 220 | 129 | 5 | 12 | 214 | 4 | 201 | 1.13e-13 | 68.6 |
| MS.gene07728.t1 | MTR_8g024790 | 60.000 | 45 | 18 | 0 | 53 | 97 | 292 | 336 | 6.80e-13 | 67.8 |
| MS.gene07728.t1 | MTR_8g024770 | 60.000 | 45 | 18 | 0 | 53 | 97 | 280 | 324 | 8.97e-13 | 67.4 |
| MS.gene07728.t1 | MTR_4g091910 | 29.341 | 167 | 98 | 3 | 50 | 215 | 45 | 192 | 2.42e-12 | 64.3 |
| MS.gene07728.t1 | MTR_4g092700 | 29.448 | 163 | 100 | 4 | 53 | 214 | 159 | 307 | 4.58e-12 | 65.1 |
| MS.gene07728.t1 | MTR_2g104490 | 27.273 | 198 | 114 | 6 | 53 | 242 | 138 | 313 | 8.08e-12 | 64.3 |
| MS.gene07728.t1 | MTR_8g009020 | 27.108 | 166 | 107 | 4 | 53 | 214 | 144 | 299 | 8.55e-12 | 64.3 |
| MS.gene07728.t1 | MTR_2g010450 | 28.221 | 163 | 103 | 3 | 53 | 214 | 178 | 327 | 1.46e-11 | 63.5 |
| MS.gene07728.t1 | MTR_1g072320 | 50.909 | 55 | 27 | 0 | 43 | 97 | 461 | 515 | 2.27e-11 | 63.5 |
| MS.gene07728.t1 | MTR_5g014600 | 26.257 | 179 | 109 | 6 | 53 | 219 | 150 | 317 | 2.47e-11 | 62.8 |
| MS.gene07728.t1 | MTR_3g111290 | 55.882 | 68 | 29 | 1 | 48 | 115 | 169 | 235 | 4.17e-11 | 62.4 |
| MS.gene07728.t1 | MTR_2g104490 | 28.659 | 164 | 88 | 5 | 53 | 209 | 138 | 279 | 7.38e-11 | 61.2 |
| MS.gene07728.t1 | MTR_5g030770 | 34.810 | 158 | 81 | 4 | 48 | 205 | 152 | 287 | 7.78e-11 | 61.6 |
| MS.gene07728.t1 | MTR_5g014520 | 39.189 | 74 | 42 | 1 | 37 | 107 | 139 | 212 | 8.67e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07728.t1 | AT5G57150 | 62.705 | 244 | 83 | 6 | 1 | 241 | 1 | 239 | 4.41e-94 | 276 |
| MS.gene07728.t1 | AT4G29930 | 54.000 | 250 | 101 | 3 | 1 | 238 | 1 | 248 | 8.32e-89 | 263 |
| MS.gene07728.t1 | AT4G29930 | 53.750 | 240 | 91 | 2 | 1 | 238 | 1 | 222 | 8.84e-86 | 254 |
| MS.gene07728.t1 | AT4G29930 | 53.750 | 240 | 88 | 3 | 1 | 238 | 1 | 219 | 4.44e-85 | 253 |
| MS.gene07728.t1 | AT5G57150 | 65.138 | 218 | 68 | 6 | 1 | 215 | 1 | 213 | 2.90e-84 | 250 |
| MS.gene07728.t1 | AT5G57150 | 63.927 | 219 | 70 | 6 | 1 | 215 | 1 | 214 | 3.31e-83 | 248 |
| MS.gene07728.t1 | AT5G57150 | 63.348 | 221 | 72 | 6 | 1 | 217 | 1 | 216 | 3.51e-83 | 248 |
| MS.gene07728.t1 | AT5G57150 | 63.927 | 219 | 70 | 6 | 1 | 215 | 1 | 214 | 1.21e-81 | 245 |
| MS.gene07728.t1 | AT4G29930 | 53.947 | 228 | 91 | 3 | 1 | 216 | 1 | 226 | 5.78e-79 | 238 |
| MS.gene07728.t1 | AT4G29930 | 53.947 | 228 | 91 | 3 | 1 | 216 | 1 | 226 | 5.78e-79 | 238 |
| MS.gene07728.t1 | AT4G29930 | 53.670 | 218 | 78 | 3 | 1 | 216 | 1 | 197 | 4.67e-75 | 228 |
| MS.gene07728.t1 | AT4G29930 | 53.714 | 175 | 67 | 3 | 1 | 163 | 1 | 173 | 8.93e-54 | 172 |
| MS.gene07728.t1 | AT1G12860 | 34.225 | 187 | 110 | 6 | 49 | 232 | 264 | 440 | 1.81e-19 | 87.0 |
| MS.gene07728.t1 | AT3G26744 | 32.979 | 188 | 115 | 5 | 49 | 232 | 304 | 484 | 9.53e-19 | 85.1 |
| MS.gene07728.t1 | AT3G26744 | 32.979 | 188 | 115 | 5 | 49 | 232 | 304 | 484 | 9.53e-19 | 85.1 |
| MS.gene07728.t1 | AT3G26744 | 32.979 | 188 | 115 | 5 | 49 | 232 | 304 | 484 | 9.53e-19 | 85.1 |
| MS.gene07728.t1 | AT2G28160 | 31.646 | 158 | 92 | 4 | 51 | 205 | 130 | 274 | 2.38e-17 | 80.1 |
| MS.gene07728.t1 | AT2G16910 | 28.638 | 213 | 131 | 5 | 51 | 244 | 313 | 523 | 2.63e-17 | 81.3 |
| MS.gene07728.t1 | AT2G28160 | 31.646 | 158 | 92 | 4 | 51 | 205 | 130 | 274 | 2.74e-17 | 79.7 |
| MS.gene07728.t1 | AT1G01260 | 31.395 | 172 | 83 | 4 | 53 | 224 | 434 | 570 | 4.12e-17 | 80.5 |
| MS.gene07728.t1 | AT1G01260 | 31.395 | 172 | 83 | 4 | 53 | 224 | 434 | 570 | 4.12e-17 | 80.5 |
| MS.gene07728.t1 | AT1G01260 | 31.395 | 172 | 83 | 4 | 53 | 224 | 434 | 570 | 4.12e-17 | 80.5 |
| MS.gene07728.t1 | AT3G26744 | 35.185 | 162 | 94 | 5 | 49 | 206 | 304 | 458 | 8.36e-17 | 79.3 |
| MS.gene07728.t1 | AT1G12860 | 35.404 | 161 | 91 | 6 | 49 | 206 | 264 | 414 | 2.78e-16 | 77.8 |
| MS.gene07728.t1 | AT2G46510 | 61.818 | 55 | 21 | 0 | 53 | 107 | 396 | 450 | 5.50e-16 | 77.4 |
| MS.gene07728.t1 | AT5G46760 | 29.570 | 186 | 114 | 7 | 53 | 233 | 416 | 589 | 6.76e-16 | 77.0 |
| MS.gene07728.t1 | AT4G17880 | 31.481 | 162 | 74 | 5 | 53 | 202 | 417 | 553 | 2.30e-15 | 75.5 |
| MS.gene07728.t1 | AT4G16430 | 46.053 | 76 | 40 | 1 | 53 | 127 | 321 | 396 | 9.49e-15 | 73.6 |
| MS.gene07728.t1 | AT1G32640 | 31.333 | 150 | 91 | 3 | 53 | 202 | 453 | 590 | 1.01e-14 | 73.6 |
| MS.gene07728.t1 | AT5G46830 | 27.473 | 182 | 111 | 3 | 53 | 228 | 344 | 510 | 2.05e-13 | 69.7 |
| MS.gene07728.t1 | AT4G21330 | 30.357 | 168 | 107 | 4 | 51 | 218 | 31 | 188 | 8.00e-13 | 65.9 |
| MS.gene07728.t1 | AT4G37850 | 30.286 | 175 | 102 | 6 | 53 | 223 | 153 | 311 | 1.17e-12 | 67.0 |
| MS.gene07728.t1 | AT4G37850 | 30.286 | 175 | 102 | 6 | 53 | 223 | 153 | 311 | 1.17e-12 | 67.0 |
| MS.gene07728.t1 | AT1G63650 | 30.675 | 163 | 106 | 3 | 56 | 212 | 409 | 570 | 1.40e-12 | 67.4 |
| MS.gene07728.t1 | AT1G63650 | 30.675 | 163 | 106 | 3 | 56 | 212 | 409 | 570 | 1.40e-12 | 67.4 |
| MS.gene07728.t1 | AT1G63650 | 30.675 | 163 | 106 | 3 | 56 | 212 | 409 | 570 | 1.40e-12 | 67.4 |
| MS.gene07728.t1 | AT1G10610 | 29.310 | 174 | 104 | 4 | 51 | 219 | 263 | 422 | 4.99e-12 | 65.5 |
| MS.gene07728.t1 | AT1G10610 | 29.310 | 174 | 104 | 4 | 51 | 219 | 166 | 325 | 5.13e-12 | 65.1 |
| MS.gene07728.t1 | AT1G10610 | 29.310 | 174 | 104 | 4 | 51 | 219 | 233 | 392 | 6.01e-12 | 65.1 |
| MS.gene07728.t1 | AT4G00870 | 43.333 | 60 | 34 | 0 | 53 | 112 | 250 | 309 | 2.23e-11 | 63.5 |
| MS.gene07728.t1 | AT2G22770 | 24.352 | 193 | 116 | 3 | 33 | 209 | 113 | 291 | 6.42e-11 | 61.6 |
Find 48 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATCTGTTCTCTTCTTCT+TGG | 0.200519 | 2.4:-51472956 | None:intergenic |
| GGATAAAGCTTCAATTATTA+AGG | 0.255192 | 2.4:+51472795 | MS.gene07728:CDS |
| ACCTATCAAGCTCTTGGGTT+TGG | 0.289916 | 2.4:-51471893 | None:intergenic |
| GTGATGAGTACAAGCTTTAC+TGG | 0.315934 | 2.4:+51471853 | MS.gene07728:CDS |
| CCTGATGATGCTGCACCATC+TGG | 0.327488 | 2.4:-51472068 | None:intergenic |
| TAGATTGGATTAATACTATT+AGG | 0.340877 | 2.4:-51472898 | None:intergenic |
| GCATTTCATTAGATGCTCAT+AGG | 0.341879 | 2.4:-51477156 | None:intergenic |
| GAGATAATGGAACTTGAATC+TGG | 0.344427 | 2.4:+51472871 | MS.gene07728:CDS |
| ATGTTTACCTTGCTAATGTT+TGG | 0.350291 | 2.4:-51472173 | None:intergenic |
| TGTTTACCTTGCTAATGTTT+GGG | 0.357210 | 2.4:-51472172 | None:intergenic |
| GATTATTCAAGCAGAGATAA+TGG | 0.360892 | 2.4:+51472858 | MS.gene07728:CDS |
| TGAGAGCTGCAACGGCTGTT+TGG | 0.367368 | 2.4:-51477119 | None:intergenic |
| TTTACCTCAAGAACTTCAAT+TGG | 0.370892 | 2.4:-51473009 | None:intergenic |
| ATTGTTACCTATCAAGCTCT+TGG | 0.383647 | 2.4:-51471899 | None:intergenic |
| TAGATGCTCATAGGGCTTAG+AGG | 0.411365 | 2.4:-51477147 | None:intergenic |
| TTGTGGTTGCAGCTGGGGAT+TGG | 0.412240 | 2.4:+51472010 | MS.gene07728:intron |
| TTGTTACCTATCAAGCTCTT+GGG | 0.420680 | 2.4:-51471898 | None:intergenic |
| TTGCAGCTGGGGATTGGATG+AGG | 0.423798 | 2.4:+51472016 | MS.gene07728:intron |
| TCCAAACCCAAGAGCTTGAT+AGG | 0.430262 | 2.4:+51471892 | MS.gene07728:CDS |
| CATTTCATTAGATGCTCATA+GGG | 0.433690 | 2.4:-51477155 | None:intergenic |
| TATCAAGCTCTTGGGTTTGG+AGG | 0.453409 | 2.4:-51471890 | None:intergenic |
| CCAGATGGTGCAGCATCATC+AGG | 0.460325 | 2.4:+51472068 | MS.gene07728:CDS |
| TCTTGATCAAAATCATAGAT+TGG | 0.462231 | 2.4:-51472913 | None:intergenic |
| TGAGCTTGACATGTAACAAA+AGG | 0.468788 | 2.4:+51473631 | MS.gene07728:CDS |
| CTGATGATGCTGCACCATCT+GGG | 0.496200 | 2.4:-51472067 | None:intergenic |
| GCAGCTTAGGGTTACATACA+TGG | 0.504078 | 2.4:+51473590 | MS.gene07728:intron |
| CTTTCCAATTGAAGTTCTTG+AGG | 0.510871 | 2.4:+51473005 | MS.gene07728:CDS |
| ACATTGACTCTGAGAGGAAG+AGG | 0.514432 | 2.4:+51472105 | MS.gene07728:CDS |
| AAGAGCTTCCTGTGTTGCTA+AGG | 0.527358 | 2.4:+51472932 | MS.gene07728:CDS |
| TTGGGTTTGGAGGAACATGT+TGG | 0.533281 | 2.4:-51471880 | None:intergenic |
| GAGCTTGACATGTAACAAAA+GGG | 0.547151 | 2.4:+51473632 | MS.gene07728:CDS |
| TGATGATGCTGCACCATCTG+GGG | 0.561453 | 2.4:-51472066 | None:intergenic |
| TTCTTGGACCTTAGCAACAC+AGG | 0.566724 | 2.4:-51472940 | None:intergenic |
| CTCATCACCAATGTTCTCCA+TGG | 0.572679 | 2.4:-51471838 | None:intergenic |
| AGGGTCATTGAGAGCTGCAA+CGG | 0.580316 | 2.4:-51477127 | None:intergenic |
| AGATGCTCATAGGGCTTAGA+GGG | 0.580755 | 2.4:-51477146 | None:intergenic |
| TGATGAGTACAAGCTTTACT+GGG | 0.584970 | 2.4:+51471854 | MS.gene07728:CDS |
| TTTGAAGACAGTCTTCATTG+AGG | 0.586246 | 2.4:+51473743 | MS.gene07728:CDS |
| AGATAATGGAACTTGAATCT+GGG | 0.592460 | 2.4:+51472872 | MS.gene07728:CDS |
| TTAACAACCATGGAGAACAT+TGG | 0.592898 | 2.4:+51471831 | None:intergenic |
| CTAAGAACATTGACTCTGAG+AGG | 0.615826 | 2.4:+51472099 | MS.gene07728:CDS |
| TTGACTCTGAGAGGAAGAGG+AGG | 0.620990 | 2.4:+51472108 | MS.gene07728:CDS |
| TAACAAAAGGGCAGACACAA+TGG | 0.621554 | 2.4:+51473644 | MS.gene07728:CDS |
| ACTCTTTGCACTTAGAGCAG+TGG | 0.626022 | 2.4:+51472148 | MS.gene07728:CDS |
| TATGATTCAAGCTCCCCAGA+TGG | 0.634637 | 2.4:+51472053 | MS.gene07728:CDS |
| CAGCTTAGGGTTACATACAT+GGG | 0.636587 | 2.4:+51473591 | MS.gene07728:intron |
| AGTGGTCCCAAACATTAGCA+AGG | 0.661525 | 2.4:+51472166 | MS.gene07728:CDS |
| ATACATGGGAGAGAATACAA+TGG | 0.777577 | 2.4:+51473605 | MS.gene07728:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTAATAATTAAATAA+TGG | - | chr2.4:51472215-51472234 | None:intergenic | 0.0% |
| !!! | ATATTTTAATTTTTAATATT+CGG | + | chr2.4:51475723-51475742 | MS.gene07728:intron | 0.0% |
| !! | AAAAAAAAAAAAAGGAAAAT+AGG | + | chr2.4:51475583-51475602 | MS.gene07728:intron | 10.0% |
| !! | AAAAAAAAGAAAAAAATGAA+AGG | + | chr2.4:51476983-51477002 | MS.gene07728:intron | 10.0% |
| !! | AAAAATATTATAACTTATCA+TGG | + | chr2.4:51476750-51476769 | MS.gene07728:intron | 10.0% |
| !! | AAATCAAAAAAAAAAATTAC+AGG | - | chr2.4:51474900-51474919 | None:intergenic | 10.0% |
| !! | AATCAAAAAAAAAAATTACA+GGG | - | chr2.4:51474899-51474918 | None:intergenic | 10.0% |
| !! | ATTCTAATTATTATATGTAT+AGG | + | chr2.4:51475290-51475309 | MS.gene07728:intron | 10.0% |
| !! | GCAAAAAAAAAAAAAAATAA+TGG | - | chr2.4:51473394-51473413 | None:intergenic | 10.0% |
| !! | GTAAATAAAAAAAAATTACA+GGG | + | chr2.4:51475026-51475045 | MS.gene07728:intron | 10.0% |
| !! | TAAAAATTAAAATATGAATG+TGG | - | chr2.4:51475718-51475737 | None:intergenic | 10.0% |
| !! | TAAATAAAAAAAAATTACAG+GGG | + | chr2.4:51475027-51475046 | MS.gene07728:intron | 10.0% |
| !! | TCTTGAAAAAAAAATAAAAT+TGG | + | chr2.4:51474982-51475001 | MS.gene07728:intron | 10.0% |
| !!! | AAAAAATATATATTTTACAG+AGG | - | chr2.4:51474925-51474944 | None:intergenic | 10.0% |
| !!! | AAAAATATATATTTTACAGA+GGG | - | chr2.4:51474924-51474943 | None:intergenic | 10.0% |
| !!! | ACATTAATAAATACTTTTTA+AGG | - | chr2.4:51475811-51475830 | None:intergenic | 10.0% |
| !!! | ATCAAAAAAAAATATTTTAC+AGG | + | chr2.4:51475055-51475074 | MS.gene07728:intron | 10.0% |
| !!! | ATTATTAAGTACTATTTTTT+TGG | - | chr2.4:51476455-51476474 | None:intergenic | 10.0% |
| !!! | CATTAATAAATACTTTTTAA+GGG | - | chr2.4:51475810-51475829 | None:intergenic | 10.0% |
| !!! | TAGGTAATTTAATTTTTTAA+GGG | + | chr2.4:51472440-51472459 | MS.gene07728:intron | 10.0% |
| !!! | TATGTTTCATTTTATATTAT+AGG | - | chr2.4:51476335-51476354 | None:intergenic | 10.0% |
| !!! | TCAAAAAAAAATATTTTACA+GGG | + | chr2.4:51475056-51475075 | MS.gene07728:intron | 10.0% |
| !! | AAATAAAAAAAAATTACAGG+GGG | + | chr2.4:51475028-51475047 | MS.gene07728:intron | 15.0% |
| !! | AATAAAAAATAGTTGAATCA+TGG | - | chr2.4:51475131-51475150 | None:intergenic | 15.0% |
| !! | ATAAAAAATAGTTGAATCAT+GGG | - | chr2.4:51475130-51475149 | None:intergenic | 15.0% |
| !! | GGTAAATAAAAAAAAATTAC+AGG | + | chr2.4:51475025-51475044 | MS.gene07728:intron | 15.0% |
| !! | TAGATAAATTTAGATAAAAC+TGG | + | chr2.4:51474034-51474053 | MS.gene07728:intron | 15.0% |
| !! | TATTAACCTAATCATTTATA+AGG | - | chr2.4:51474834-51474853 | None:intergenic | 15.0% |
| !! | TTATAAATGATTAGGTTAAT+AGG | + | chr2.4:51474833-51474852 | MS.gene07728:intron | 15.0% |
| !!! | AAAAAAAAATATTTTACAGG+GGG | + | chr2.4:51475058-51475077 | MS.gene07728:intron | 15.0% |
| !!! | AAATAAAATTGGTTTTTGTT+TGG | + | chr2.4:51474993-51475012 | MS.gene07728:intron | 15.0% |
| !!! | AAATTTAACTTATTTAGCAT+AGG | + | chr2.4:51476241-51476260 | MS.gene07728:intron | 15.0% |
| !!! | ATTTCCTATTTTTTTTAAGT+TGG | - | chr2.4:51473153-51473172 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTTGGTTACAAT+TGG | - | chr2.4:51476490-51476509 | None:intergenic | 15.0% |
| !!! | CAAAAAAAAATATTTTACAG+GGG | + | chr2.4:51475057-51475076 | MS.gene07728:intron | 15.0% |
| !!! | GTAGGTAATTTAATTTTTTA+AGG | + | chr2.4:51472439-51472458 | MS.gene07728:intron | 15.0% |
| !!! | TGAAGTTCTTTTTTTTTTTT+GGG | - | chr2.4:51474785-51474804 | None:intergenic | 15.0% |
| !!! | TGCTTATATTTTATTACAAA+CGG | + | chr2.4:51472389-51472408 | MS.gene07728:intron | 15.0% |
| !!! | TTAATTTTGAAATGTTGAAT+TGG | - | chr2.4:51476522-51476541 | None:intergenic | 15.0% |
| !!! | TTGTTGTTTTATATTATTTG+AGG | - | chr2.4:51473911-51473930 | None:intergenic | 15.0% |
| !! | AACTTCAAAAAAATAGATAG+TGG | + | chr2.4:51473213-51473232 | MS.gene07728:intron | 20.0% |
| !! | AATAAAAAAAAATTACAGGG+GGG | + | chr2.4:51475029-51475048 | MS.gene07728:intron | 20.0% |
| !! | AATGTGTGCATAATTAATAT+TGG | + | chr2.4:51475428-51475447 | MS.gene07728:intron | 20.0% |
| !! | AATTTCTTTCTAATTATGAG+TGG | + | chr2.4:51472749-51472768 | MS.gene07728:intron | 20.0% |
| !! | ACTGGAATTTAGATAAATTT+AGG | + | chr2.4:51474052-51474071 | MS.gene07728:intron | 20.0% |
| !! | ACTTCAAAAAAATAGATAGT+GGG | + | chr2.4:51473214-51473233 | MS.gene07728:intron | 20.0% |
| !! | ACTTGTAATAGAAAAATGTT+TGG | - | chr2.4:51473966-51473985 | None:intergenic | 20.0% |
| !! | AGAAAGTGAAATGAAATTAA+AGG | - | chr2.4:51473781-51473800 | None:intergenic | 20.0% |
| !! | AGAATTTAGAAGGAATAAAA+AGG | - | chr2.4:51476605-51476624 | None:intergenic | 20.0% |
| !! | ATAATCCATTAGAATTTAGA+AGG | - | chr2.4:51476615-51476634 | None:intergenic | 20.0% |
| !! | ATGCTAAAAAAATAAATGTG+GGG | + | chr2.4:51473486-51473505 | MS.gene07728:intron | 20.0% |
| !! | ATTAGAATAATCCATTTCTA+TGG | - | chr2.4:51475278-51475297 | None:intergenic | 20.0% |
| !! | CTAACAACATGTTTAAAAAA+TGG | - | chr2.4:51472636-51472655 | None:intergenic | 20.0% |
| !! | CTACTATCTTCATAAAATAT+AGG | + | chr2.4:51472312-51472331 | MS.gene07728:intron | 20.0% |
| !! | CTGAAAGAAAAGAAAAAAAA+AGG | - | chr2.4:51477061-51477080 | None:intergenic | 20.0% |
| !! | CTGGAATTTAGATAAATTTA+GGG | + | chr2.4:51474053-51474072 | MS.gene07728:intron | 20.0% |
| !! | GAAACCAACTTAAAAAAAAT+AGG | + | chr2.4:51473146-51473165 | MS.gene07728:intron | 20.0% |
| !! | GAAATAATTAAACCATATGA+TGG | - | chr2.4:51472708-51472727 | None:intergenic | 20.0% |
| !! | GATGCTAAAAAAATAAATGT+GGG | + | chr2.4:51473485-51473504 | MS.gene07728:intron | 20.0% |
| !! | GTAAATATAATATGTGTTGT+TGG | + | chr2.4:51474316-51474335 | MS.gene07728:intron | 20.0% |
| !! | TAGATTGGATTAATACTATT+AGG | - | chr2.4:51472901-51472920 | None:intergenic | 20.0% |
| !! | TATTACAATGACAAATTATG+AGG | - | chr2.4:51476834-51476853 | None:intergenic | 20.0% |
| !! | TGATGCTAAAAAAATAAATG+TGG | + | chr2.4:51473484-51473503 | MS.gene07728:intron | 20.0% |
| !! | TTATGACCTTATAAATGATT+AGG | + | chr2.4:51474825-51474844 | MS.gene07728:intron | 20.0% |
| !! | TTATTCCTTCTAAATTCTAA+TGG | + | chr2.4:51476607-51476626 | MS.gene07728:intron | 20.0% |
| !! | TTTAACTAAAAAATATGGAC+TGG | - | chr2.4:51476698-51476717 | None:intergenic | 20.0% |
| !! | TTTAATTCAAAATTAGGGAA+GGG | + | chr2.4:51476941-51476960 | MS.gene07728:intron | 20.0% |
| !!! | AAAAAAAATATTTTACAGGG+GGG | + | chr2.4:51475059-51475078 | MS.gene07728:intron | 20.0% |
| !!! | AAGAAATTTTCGTTTTTGTT+TGG | - | chr2.4:51474966-51474985 | None:intergenic | 20.0% |
| !!! | AAGTCAAAAGAGAAAATTTT+AGG | - | chr2.4:51476095-51476114 | None:intergenic | 20.0% |
| !!! | AATTATGAGGTACTTTTTAT+AGG | - | chr2.4:51476821-51476840 | None:intergenic | 20.0% |
| !!! | ATTAGTACTACTCAATTTTT+TGG | + | chr2.4:51472232-51472251 | MS.gene07728:intron | 20.0% |
| !!! | ATTATGAGGTACTTTTTATA+GGG | - | chr2.4:51476820-51476839 | None:intergenic | 20.0% |
| !!! | CTAAATTCTAATGGATTATT+TGG | + | chr2.4:51476616-51476635 | MS.gene07728:intron | 20.0% |
| !!! | CTTTTTTTTTCTTTTCTTTC+AGG | + | chr2.4:51477059-51477078 | MS.gene07728:intron | 20.0% |
| !!! | GAAGTTCTTTTTTTTTTTTG+GGG | - | chr2.4:51474784-51474803 | None:intergenic | 20.0% |
| !!! | GAGAGATAGAATTTTATTTT+TGG | - | chr2.4:51476500-51476519 | None:intergenic | 20.0% |
| !!! | GTCAACTTTTTCTTATAATA+AGG | + | chr2.4:51475994-51476013 | MS.gene07728:intron | 20.0% |
| !!! | GTCAATTGTTTCTTATAATA+AGG | - | chr2.4:51475895-51475914 | None:intergenic | 20.0% |
| !!! | GTGAAGTTCTTTTTTTTTTT+TGG | - | chr2.4:51474786-51474805 | None:intergenic | 20.0% |
| !!! | TAAGAAAAAGTTGACTTTTT+AGG | - | chr2.4:51475989-51476008 | None:intergenic | 20.0% |
| !!! | TAAGAAACAATTGACTTTTT+TGG | + | chr2.4:51475900-51475919 | MS.gene07728:intron | 20.0% |
| !!! | TATCTGAATTTATCTCTTTT+TGG | - | chr2.4:51474234-51474253 | None:intergenic | 20.0% |
| !!! | TATGCTTTTAATTTTTGTGT+TGG | - | chr2.4:51473998-51474017 | None:intergenic | 20.0% |
| !!! | TATTTTCCTATTTTGTGAAA+AGG | - | chr2.4:51475547-51475566 | None:intergenic | 20.0% |
| !!! | TCATTACTTTTTGTAAACTT+TGG | + | chr2.4:51474132-51474151 | MS.gene07728:intron | 20.0% |
| !!! | TCTTTAATCTATTTGTTGTT+GGG | - | chr2.4:51473429-51473448 | None:intergenic | 20.0% |
| !!! | TTAGTACTACTCAATTTTTT+GGG | + | chr2.4:51472233-51472252 | MS.gene07728:intron | 20.0% |
| !!! | TTCTTTAATCTATTTGTTGT+TGG | - | chr2.4:51473430-51473449 | None:intergenic | 20.0% |
| !!! | TTGTGTTACCTTATTTATTT+CGG | + | chr2.4:51474438-51474457 | MS.gene07728:intron | 20.0% |
| !!! | TTGTTTGAATTAAGTGTTTT+GGG | + | chr2.4:51472283-51472302 | MS.gene07728:intron | 20.0% |
| !!! | TTTGTTTGAATTAAGTGTTT+TGG | + | chr2.4:51472282-51472301 | MS.gene07728:intron | 20.0% |
| !!! | TTTTAATTCAAAATTAGGGA+AGG | + | chr2.4:51476940-51476959 | MS.gene07728:intron | 20.0% |
| !!! | TTTTCACAAAATAGGAAAAT+AGG | + | chr2.4:51475546-51475565 | MS.gene07728:intron | 20.0% |
| !!! | TTTTTTAAACATGTTGTTAG+AGG | + | chr2.4:51472636-51472655 | MS.gene07728:intron | 20.0% |
| !!! | TTTTTTTATTTACCCCTAAT+AGG | - | chr2.4:51475019-51475038 | None:intergenic | 20.0% |
| ! | AAAAACAAAATTAAACCACG+CGG | - | chr2.4:51474482-51474501 | None:intergenic | 25.0% |
| ! | AAAATGAAACATATTGACGT+AGG | + | chr2.4:51476342-51476361 | MS.gene07728:intron | 25.0% |
| ! | AAATTTAGGGAGATATATCA+AGG | + | chr2.4:51474066-51474085 | MS.gene07728:intron | 25.0% |
| ! | AATGCAAAATTGCTCTATTT+AGG | - | chr2.4:51472504-51472523 | None:intergenic | 25.0% |
| ! | ACCTACAAAGCAAATTAAAT+AGG | - | chr2.4:51473860-51473879 | None:intergenic | 25.0% |
| ! | AGATTAAAGAAGAGATTGTA+AGG | + | chr2.4:51473439-51473458 | MS.gene07728:intron | 25.0% |
| ! | AGTTTAACGAACATTAATTG+AGG | + | chr2.4:51474744-51474763 | MS.gene07728:intron | 25.0% |
| ! | ATAGTGTGATACATGAATTA+GGG | + | chr2.4:51474353-51474372 | MS.gene07728:intron | 25.0% |
| ! | ATCATGGTAATTGAGATATA+TGG | + | chr2.4:51471987-51472006 | MS.gene07728:intron | 25.0% |
| ! | GAAAACTATTAACCATCATA+TGG | + | chr2.4:51472693-51472712 | MS.gene07728:intron | 25.0% |
| ! | GACATAAAAGACCAATAATT+AGG | + | chr2.4:51474398-51474417 | MS.gene07728:intron | 25.0% |
| ! | GGATAAAGCTTCAATTATTA+AGG | + | chr2.4:51472795-51472814 | MS.gene07728:CDS | 25.0% |
| ! | GGTACAAAAGTAAATGAATT+TGG | + | chr2.4:51472333-51472352 | MS.gene07728:intron | 25.0% |
| ! | TACAGTATAGTATTACCATA+CGG | - | chr2.4:51475520-51475539 | None:intergenic | 25.0% |
| ! | TATAAATCACCACCTTAATA+AGG | + | chr2.4:51473263-51473282 | MS.gene07728:intron | 25.0% |
| ! | TCTTGATCAAAATCATAGAT+TGG | - | chr2.4:51472916-51472935 | None:intergenic | 25.0% |
| ! | TGAGTGTGTAATTTGATATA+TGG | + | chr2.4:51473561-51473580 | MS.gene07728:intron | 25.0% |
| ! | TTAAGGTGGTGATTTATATT+TGG | - | chr2.4:51473261-51473280 | None:intergenic | 25.0% |
| ! | TTAATTCAAAATTAGGGAAG+GGG | + | chr2.4:51476942-51476961 | MS.gene07728:intron | 25.0% |
| !! | AAAAAAATATTTTACAGGGG+GGG | + | chr2.4:51475060-51475079 | MS.gene07728:intron | 25.0% |
| !! | AAGTTTAAGTGTAGTGTTTT+AGG | + | chr2.4:51474694-51474713 | MS.gene07728:intron | 25.0% |
| !! | AGTTTAAGTGTAGTGTTTTA+GGG | + | chr2.4:51474695-51474714 | MS.gene07728:intron | 25.0% |
| !! | CATGCTATAATTTGCAAAAT+GGG | + | chr2.4:51474569-51474588 | MS.gene07728:intron | 25.0% |
| !! | CTTTTTCTTATAATAAGGAC+CGG | + | chr2.4:51475999-51476018 | MS.gene07728:intron | 25.0% |
| !! | TAAATAGAGCAATTTTGCAT+TGG | + | chr2.4:51472503-51472522 | MS.gene07728:intron | 25.0% |
| !! | TACTTTCCTTTTCACAAAAT+AGG | + | chr2.4:51475538-51475557 | MS.gene07728:intron | 25.0% |
| !! | TATATCAAGGTGTATTCTTT+TGG | + | chr2.4:51474079-51474098 | MS.gene07728:intron | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+CGG | - | chr2.4:51475890-51475909 | None:intergenic | 25.0% |
| !! | TTTTCTTCTTCGTCTAATAA+TGG | + | chr2.4:51474518-51474537 | MS.gene07728:intron | 25.0% |
| !! | TTTTTATAGGGTACATAATG+AGG | - | chr2.4:51476808-51476827 | None:intergenic | 25.0% |
| !!! | ATAATGGATAAAGTCTGATT+TGG | - | chr2.4:51473378-51473397 | None:intergenic | 25.0% |
| !!! | CTTTAATCTATTTGTTGTTG+GGG | - | chr2.4:51473428-51473447 | None:intergenic | 25.0% |
| !!! | CTTTTAGTTCTTCTTTCAAA+AGG | - | chr2.4:51475687-51475706 | None:intergenic | 25.0% |
| !!! | TCCTATTTAATTTGCTTTGT+AGG | + | chr2.4:51473856-51473875 | MS.gene07728:intron | 25.0% |
| !!! | TTTAATCTATTTGTTGTTGG+GGG | - | chr2.4:51473427-51473446 | None:intergenic | 25.0% |
| !!! | TTTATATTTGGTTCTAAGCA+TGG | - | chr2.4:51473249-51473268 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTACCCTCTAAT+AGG | + | chr2.4:51474940-51474959 | MS.gene07728:intron | 25.0% |
| ACTAATATTATGTGACACAG+TGG | + | chr2.4:51472416-51472435 | MS.gene07728:intron | 30.0% | |
| ATGTTTACCTTGCTAATGTT+TGG | - | chr2.4:51472176-51472195 | None:intergenic | 30.0% | |
| CAACATACGTTAATGAATGT+TGG | - | chr2.4:51475161-51475180 | None:intergenic | 30.0% | |
| CTAATATTATGTGACACAGT+GGG | + | chr2.4:51472417-51472436 | MS.gene07728:intron | 30.0% | |
| CTTTCTCTCTTTCTCTATTA+GGG | - | chr2.4:51473314-51473333 | None:intergenic | 30.0% | |
| GAAACACGTTTCCTAATTAT+TGG | - | chr2.4:51474412-51474431 | None:intergenic | 30.0% | |
| GAAATGACCTATATTACATG+GGG | + | chr2.4:51475090-51475109 | MS.gene07728:intron | 30.0% | |
| GATAGTGTGATACATGAATT+AGG | + | chr2.4:51474352-51474371 | MS.gene07728:intron | 30.0% | |
| GATTATTCAAGCAGAGATAA+TGG | + | chr2.4:51472858-51472877 | MS.gene07728:CDS | 30.0% | |
| GGAAATGACCTATATTACAT+GGG | + | chr2.4:51475089-51475108 | MS.gene07728:intron | 30.0% | |
| GTAATTGAGATATATGGTTG+TGG | + | chr2.4:51471993-51472012 | MS.gene07728:intron | 30.0% | |
| GTCATATGCCGAAATAAATA+AGG | - | chr2.4:51474449-51474468 | None:intergenic | 30.0% | |
| GTGATGTCTTTGATATCTAT+TGG | + | chr2.4:51472671-51472690 | MS.gene07728:intron | 30.0% | |
| TAAATTAGTCCCAAAAGAGA+GGG | + | chr2.4:51476548-51476567 | MS.gene07728:intron | 30.0% | |
| TAACTTAACTTTCGCTATCA+AGG | - | chr2.4:51474808-51474827 | None:intergenic | 30.0% | |
| TAATTCAAAATTAGGGAAGG+GGG | + | chr2.4:51476943-51476962 | MS.gene07728:intron | 30.0% | |
| TAGCTAGAAAACAAAGAAAC+AGG | + | chr2.4:51476780-51476799 | MS.gene07728:intron | 30.0% | |
| TATTTACCTCCCTGTAATAT+AGG | + | chr2.4:51474856-51474875 | MS.gene07728:intron | 30.0% | |
| TCACTTTGATTCAAGTATGA+AGG | + | chr2.4:51471932-51471951 | MS.gene07728:intron | 30.0% | |
| TCCATTTCTATGGTTTAGAA+TGG | - | chr2.4:51475268-51475287 | None:intergenic | 30.0% | |
| TCTAATAATGGCAAAATGTC+AGG | + | chr2.4:51474530-51474549 | MS.gene07728:intron | 30.0% | |
| TCTATGAAATATGCTTGAGA+AGG | - | chr2.4:51474168-51474187 | None:intergenic | 30.0% | |
| TCTTTCTCTCTTTCTCTATT+AGG | - | chr2.4:51473315-51473334 | None:intergenic | 30.0% | |
| TGGTATTTGATAGGTTGTAA+TGG | - | chr2.4:51473358-51473377 | None:intergenic | 30.0% | |
| TGTTTACCTTGCTAATGTTT+GGG | - | chr2.4:51472175-51472194 | None:intergenic | 30.0% | |
| TGTTTGGCTAAAATATCGTT+TGG | - | chr2.4:51473950-51473969 | None:intergenic | 30.0% | |
| TTGAAGTTCTTGAGGTAAAT+TGG | + | chr2.4:51473013-51473032 | MS.gene07728:intron | 30.0% | |
| TTTACCTCAAGAACTTCAAT+TGG | - | chr2.4:51473012-51473031 | None:intergenic | 30.0% | |
| TTTGAGGAAGAAGAAAATGA+AGG | - | chr2.4:51473895-51473914 | None:intergenic | 30.0% | |
| ! | AAAATATATCTAGCTTGACG+TGG | + | chr2.4:51476897-51476916 | MS.gene07728:intron | 30.0% |
| ! | CCATTTCTATGGTTTAGAAT+GGG | - | chr2.4:51475267-51475286 | None:intergenic | 30.0% |
| ! | GCATGCTATAATTTGCAAAA+TGG | + | chr2.4:51474568-51474587 | MS.gene07728:intron | 30.0% |
| ! | GTTTTTACCCCATGTAATAT+AGG | - | chr2.4:51475100-51475119 | None:intergenic | 30.0% |
| ! | TAGTTGAATCATGGGTTAAT+AGG | - | chr2.4:51475122-51475141 | None:intergenic | 30.0% |
| ! | TTTACTAAACCCTCTCTTTT+GGG | - | chr2.4:51476560-51476579 | None:intergenic | 30.0% |
| ! | TTTGAAATCAACCCTAACTT+TGG | - | chr2.4:51474725-51474744 | None:intergenic | 30.0% |
| ! | TTTTACTAAACCCTCTCTTT+TGG | - | chr2.4:51476561-51476580 | None:intergenic | 30.0% |
| !! | AGATAATGGAACTTGAATCT+GGG | + | chr2.4:51472872-51472891 | MS.gene07728:CDS | 30.0% |
| !! | AGTCTGATTTGGTATTTGAT+AGG | - | chr2.4:51473367-51473386 | None:intergenic | 30.0% |
| !! | CTAATGGATTATTTGGTTCA+AGG | + | chr2.4:51476623-51476642 | MS.gene07728:intron | 30.0% |
| !! | TTTTTGTTTGGCCTATTAGA+GGG | - | chr2.4:51474954-51474973 | None:intergenic | 30.0% |
| !!! | GTGACTTTTTCTTTTTCAGA+TGG | + | chr2.4:51472774-51472793 | MS.gene07728:intron | 30.0% |
| !!! | TTTTGACTTTCTTAACTCTG+TGG | + | chr2.4:51476106-51476125 | MS.gene07728:intron | 30.0% |
| AAAGATGATGATAGAGAGAG+TGG | - | chr2.4:51473040-51473059 | None:intergenic | 35.0% | |
| AAGATGATGATAGAGAGAGT+GGG | - | chr2.4:51473039-51473058 | None:intergenic | 35.0% | |
| ACAGGGTGTAAAATCAGAAA+TGG | - | chr2.4:51474882-51474901 | None:intergenic | 35.0% | |
| AGGAAGAAGAAAATGAAGGT+TGG | - | chr2.4:51473891-51473910 | None:intergenic | 35.0% | |
| AGTATAGTATTACCATACGG+CGG | - | chr2.4:51475517-51475536 | None:intergenic | 35.0% | |
| ATACATGGGAGAGAATACAA+TGG | + | chr2.4:51473605-51473624 | MS.gene07728:CDS | 35.0% | |
| ATGCAAAATATTACTCCCTC+CGG | - | chr2.4:51476021-51476040 | None:intergenic | 35.0% | |
| ATGTATCACACTATCACTAG+TGG | - | chr2.4:51474347-51474366 | None:intergenic | 35.0% | |
| ATTCAGAGGCTAAGTAATTG+TGG | + | chr2.4:51476646-51476665 | MS.gene07728:intron | 35.0% | |
| ATTGTTACCTATCAAGCTCT+TGG | - | chr2.4:51471902-51471921 | None:intergenic | 35.0% | |
| CAGAAATGGCCTATATTACA+GGG | - | chr2.4:51474868-51474887 | None:intergenic | 35.0% | |
| CCCATTCTAAACCATAGAAA+TGG | + | chr2.4:51475264-51475283 | MS.gene07728:intron | 35.0% | |
| CGGAAATGACCTATATTACA+TGG | + | chr2.4:51475088-51475107 | MS.gene07728:intron | 35.0% | |
| CTAAATTAGTCCCAAAAGAG+AGG | + | chr2.4:51476547-51476566 | MS.gene07728:intron | 35.0% | |
| CTTTCCAATTGAAGTTCTTG+AGG | + | chr2.4:51473005-51473024 | MS.gene07728:CDS | 35.0% | |
| GAGCTTGACATGTAACAAAA+GGG | + | chr2.4:51473632-51473651 | MS.gene07728:CDS | 35.0% | |
| GCATCAAAAATACAAGAGAG+AGG | - | chr2.4:51473470-51473489 | None:intergenic | 35.0% | |
| GTTACCTTGTATTCATGAGA+GGG | + | chr2.4:51474375-51474394 | MS.gene07728:intron | 35.0% | |
| TACGGCGGTGAAAAATAAAA+TGG | - | chr2.4:51475502-51475521 | None:intergenic | 35.0% | |
| TATCTTAACATGTGCCTTGA+GGG | + | chr2.4:51472594-51472613 | MS.gene07728:intron | 35.0% | |
| TCAGAAATGGCCTATATTAC+AGG | - | chr2.4:51474869-51474888 | None:intergenic | 35.0% | |
| TGAGCTTGACATGTAACAAA+AGG | + | chr2.4:51473631-51473650 | MS.gene07728:CDS | 35.0% | |
| TGATGAGTACAAGCTTTACT+GGG | + | chr2.4:51471854-51471873 | MS.gene07728:CDS | 35.0% | |
| TTACCTTGTATTCATGAGAG+GGG | + | chr2.4:51474376-51474395 | MS.gene07728:intron | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | + | chr2.4:51476003-51476022 | MS.gene07728:intron | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | - | chr2.4:51476022-51476003 | None:intergenic | 35.0% | |
| TTGTTACCTATCAAGCTCTT+GGG | - | chr2.4:51471901-51471920 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | + | chr2.4:51476002-51476021 | MS.gene07728:intron | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr2.4:51476021-51476002 | None:intergenic | 35.0% | |
| TTTGAAGACAGTCTTCATTG+AGG | + | chr2.4:51473743-51473762 | MS.gene07728:CDS | 35.0% | |
| ! | TATTTGGTTCAAGGATTCAG+AGG | + | chr2.4:51476632-51476651 | MS.gene07728:intron | 35.0% |
| ! | TCTTTTCTTTCAGGCAAATG+AGG | + | chr2.4:51477068-51477087 | MS.gene07728:intron | 35.0% |
| !! | GAGATAATGGAACTTGAATC+TGG | + | chr2.4:51472871-51472890 | MS.gene07728:CDS | 35.0% |
| !! | GGTTTTTGTTTGGCCTATTA+GGG | + | chr2.4:51475003-51475022 | MS.gene07728:intron | 35.0% |
| !! | GTTTTTGTTTGGCCTATTAG+AGG | - | chr2.4:51475023-51475004 | None:intergenic | 35.0% |
| !! | GTTTTTGTTTGGCCTATTAG+GGG | + | chr2.4:51475004-51475023 | MS.gene07728:intron | 35.0% |
| !! | TGACAAGGATTTTGCCATTT+TGG | - | chr2.4:51474634-51474653 | None:intergenic | 35.0% |
| !! | TGGTTTTTGTTTGGCCTATT+AGG | + | chr2.4:51475002-51475021 | MS.gene07728:intron | 35.0% |
| !!! | AATTTTAACTTGTGCCCTCA+AGG | - | chr2.4:51472611-51472630 | None:intergenic | 35.0% |
| !!! | TTTTATTTTTCACCGCCGTA+TGG | + | chr2.4:51475502-51475521 | MS.gene07728:intron | 35.0% |
| AAATGGCCTATATTACAGGG+AGG | - | chr2.4:51474865-51474884 | None:intergenic | 40.0% | |
| ATACACACGCAACTATGACA+AGG | - | chr2.4:51474649-51474668 | None:intergenic | 40.0% | |
| ATATGGTTGAGTGCAGCTTA+GGG | + | chr2.4:51473578-51473597 | MS.gene07728:intron | 40.0% | |
| CAAAATTAAACCACGCGGTA+AGG | - | chr2.4:51474477-51474496 | None:intergenic | 40.0% | |
| CAGCTTAGGGTTACATACAT+GGG | + | chr2.4:51473591-51473610 | MS.gene07728:intron | 40.0% | |
| CTGATCTGTTCTCTTCTTCT+TGG | - | chr2.4:51472959-51472978 | None:intergenic | 40.0% | |
| CTTTCTTAACTCTGTGGCTT+TGG | + | chr2.4:51476112-51476131 | MS.gene07728:intron | 40.0% | |
| GGTTACCTTGTATTCATGAG+AGG | + | chr2.4:51474374-51474393 | MS.gene07728:intron | 40.0% | |
| GTATCTTAACATGTGCCTTG+AGG | + | chr2.4:51472593-51472612 | MS.gene07728:intron | 40.0% | |
| GTGATGAGTACAAGCTTTAC+TGG | + | chr2.4:51471853-51471872 | MS.gene07728:CDS | 40.0% | |
| GTGCTTTCGGACACTAATTA+AGG | + | chr2.4:51475844-51475863 | MS.gene07728:intron | 40.0% | |
| TAACAAAAGGGCAGACACAA+TGG | + | chr2.4:51473644-51473663 | MS.gene07728:CDS | 40.0% | |
| TATATGGTTGAGTGCAGCTT+AGG | + | chr2.4:51473577-51473596 | MS.gene07728:intron | 40.0% | |
| TATTATGTGACACAGTGGGT+AGG | + | chr2.4:51472421-51472440 | MS.gene07728:intron | 40.0% | |
| TGTCTCTAGCTAATGCTAGT+TGG | - | chr2.4:51475630-51475649 | None:intergenic | 40.0% | |
| TTGATATGTCGCACAATGAG+TGG | + | chr2.4:51476155-51476174 | MS.gene07728:intron | 40.0% | |
| TTGCTTAACATGTGCCCTAA+GGG | - | chr2.4:51472481-51472500 | None:intergenic | 40.0% | |
| ! | ATTTTACAGGGGGGGAAAAT+CGG | + | chr2.4:51475068-51475087 | MS.gene07728:intron | 40.0% |
| ! | TAATTAGTGTCCGAAAGCAC+TGG | - | chr2.4:51475844-51475863 | None:intergenic | 40.0% |
| ! | TCTTTCTCTATTAGGGTACC+TGG | - | chr2.4:51473307-51473326 | None:intergenic | 40.0% |
| ! | TTTAGGGCTCACCAAAGTTA+GGG | + | chr2.4:51474711-51474730 | MS.gene07728:intron | 40.0% |
| !! | AATGGTAGGCCTTATTAAGG+TGG | - | chr2.4:51473275-51473294 | None:intergenic | 40.0% |
| !! | ATCTATTTGTTGTTGGGGGT+TGG | - | chr2.4:51473423-51473442 | None:intergenic | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | + | chr2.4:51472464-51472483 | MS.gene07728:intron | 40.0% |
| !! | CTAAGAACATTGACTCTGAG+AGG | + | chr2.4:51472099-51472118 | MS.gene07728:CDS | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | + | chr2.4:51472463-51472482 | MS.gene07728:intron | 40.0% |
| !!! | AGGATTTTGCCATTTTGGTG+TGG | - | chr2.4:51474629-51474648 | None:intergenic | 40.0% |
| !!! | GATTGGATGAGGCTTTTTCA+GGG | + | chr2.4:51472027-51472046 | MS.gene07728:CDS | 40.0% |
| !!! | GGATTTTGCCATTTTGGTGT+GGG | - | chr2.4:51474628-51474647 | None:intergenic | 40.0% |
| !!! | TTTTAGGGCTCACCAAAGTT+AGG | + | chr2.4:51474710-51474729 | MS.gene07728:intron | 40.0% |
| ACCTATCAAGCTCTTGGGTT+TGG | - | chr2.4:51471896-51471915 | None:intergenic | 45.0% | |
| ACTCTTTGCACTTAGAGCAG+TGG | + | chr2.4:51472148-51472167 | MS.gene07728:CDS | 45.0% | |
| AGATGCTCATAGGGCTTAGA+GGG | - | chr2.4:51477149-51477168 | None:intergenic | 45.0% | |
| AGTGGTCCCAAACATTAGCA+AGG | + | chr2.4:51472166-51472185 | MS.gene07728:CDS | 45.0% | |
| ATATGGTTGTGGTTGCAGCT+GGG | + | chr2.4:51472004-51472023 | MS.gene07728:intron | 45.0% | |
| CAAAAGCCTGCCTGAAAAAG+AGG | - | chr2.4:51473727-51473746 | None:intergenic | 45.0% | |
| GATGTGAGAAAGAGTGGCTT+TGG | - | chr2.4:51474604-51474623 | None:intergenic | 45.0% | |
| GCAGCTTAGGGTTACATACA+TGG | + | chr2.4:51473590-51473609 | MS.gene07728:intron | 45.0% | |
| GCCTGAAAAAGAGGTGATGT+TGG | - | chr2.4:51473718-51473737 | None:intergenic | 45.0% | |
| GTCAAATATCGTACTCCCTC+CGG | + | chr2.4:51475868-51475887 | MS.gene07728:intron | 45.0% | |
| GTTGCTTAACATGTGCCCTA+AGG | - | chr2.4:51472482-51472501 | None:intergenic | 45.0% | |
| TAAGTAATTGTGGCTGCTGC+AGG | + | chr2.4:51476656-51476675 | MS.gene07728:intron | 45.0% | |
| TAGATGCTCATAGGGCTTAG+AGG | - | chr2.4:51477150-51477169 | None:intergenic | 45.0% | |
| TATATGGTTGTGGTTGCAGC+TGG | + | chr2.4:51472003-51472022 | MS.gene07728:intron | 45.0% | |
| TATCAAGCTCTTGGGTTTGG+AGG | - | chr2.4:51471893-51471912 | None:intergenic | 45.0% | |
| TATGATTCAAGCTCCCCAGA+TGG | + | chr2.4:51472053-51472072 | MS.gene07728:CDS | 45.0% | |
| TCACATCACCCACACCAAAA+TGG | + | chr2.4:51474617-51474636 | MS.gene07728:intron | 45.0% | |
| TCCAAACCCAAGAGCTTGAT+AGG | + | chr2.4:51471892-51471911 | MS.gene07728:CDS | 45.0% | |
| TGTCCCCTCTCATGAATACA+AGG | - | chr2.4:51474382-51474401 | None:intergenic | 45.0% | |
| TTCTTGGACCTTAGCAACAC+AGG | - | chr2.4:51472943-51472962 | None:intergenic | 45.0% | |
| TTGGGTTTGGAGGAACATGT+TGG | - | chr2.4:51471883-51471902 | None:intergenic | 45.0% | |
| ! | AAGAGCTTCCTGTGTTGCTA+AGG | + | chr2.4:51472932-51472951 | MS.gene07728:CDS | 45.0% |
| ! | GCCAACATCACCTCTTTTTC+AGG | + | chr2.4:51473714-51473733 | MS.gene07728:CDS | 45.0% |
| ! | TTCTCTATTAGGGTACCTGG+TGG | - | chr2.4:51473304-51473323 | None:intergenic | 45.0% |
| !! | ACATTGACTCTGAGAGGAAG+AGG | + | chr2.4:51472105-51472124 | MS.gene07728:CDS | 45.0% |
| !! | GGATTGGATGAGGCTTTTTC+AGG | + | chr2.4:51472026-51472045 | MS.gene07728:CDS | 45.0% |
| !! | GGCAATGGTAGGCCTTATTA+AGG | - | chr2.4:51473278-51473297 | None:intergenic | 45.0% |
| !!! | ACATCACCTCTTTTTCAGGC+AGG | + | chr2.4:51473718-51473737 | MS.gene07728:CDS | 45.0% |
| !! | CAAAAAAAAAAAAAAAAAAA+AGG | + | chr2.4:51475575-51475594 | MS.gene07728:intron | 5.0% |
| !! | CAATTTAAAAAAAAAAAAAA+AGG | + | chr2.4:51473124-51473143 | MS.gene07728:intron | 5.0% |
| !! | TAATTAATTATAATTAATCA+TGG | + | chr2.4:51471971-51471990 | MS.gene07728:intron | 5.0% |
| !!! | AATATATTTTTTTAATAAAG+AGG | - | chr2.4:51473834-51473853 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTAATTCAAAATT+AGG | + | chr2.4:51476935-51476954 | MS.gene07728:intron | 5.0% |
| !!! | ATTTTTTTTTTTTTTATGAA+TGG | - | chr2.4:51476299-51476318 | None:intergenic | 5.0% |
| !!! | CTTTTTTTTTTTTTTTAAAT+TGG | - | chr2.4:51473126-51473145 | None:intergenic | 5.0% |
| !!! | GTTATAATATTTTTTTTTTT+TGG | - | chr2.4:51476744-51476763 | None:intergenic | 5.0% |
| !!! | GTTTTAAAAAAAAAAATTTT+TGG | + | chr2.4:51476069-51476088 | MS.gene07728:intron | 5.0% |
| !!! | TTTTATTTAACTAAAAAATA+TGG | - | chr2.4:51476703-51476722 | None:intergenic | 5.0% |
| !!! | TTTTTTTTAATTCAAAATTA+GGG | + | chr2.4:51476936-51476955 | MS.gene07728:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | - | chr2.4:51475575-51475594 | None:intergenic | 5.0% |
| AGGGTCATTGAGAGCTGCAA+CGG | - | chr2.4:51477130-51477149 | None:intergenic | 50.0% | |
| GTGGGTGATGTGAGAAAGAG+TGG | - | chr2.4:51474610-51474629 | None:intergenic | 50.0% | |
| TAAACCACGCGGTAAGGTCT+TGG | - | chr2.4:51474471-51474490 | None:intergenic | 50.0% | |
| TATGGTTGTGGTTGCAGCTG+GGG | + | chr2.4:51472005-51472024 | MS.gene07728:intron | 50.0% | |
| ! | CTGATGATGCTGCACCATCT+GGG | - | chr2.4:51472070-51472089 | None:intergenic | 50.0% |
| ! | TATTAGGGTACCTGGTGGTG+TGG | - | chr2.4:51473299-51473318 | None:intergenic | 50.0% |
| ! | TGATGATGCTGCACCATCTG+GGG | - | chr2.4:51472069-51472088 | None:intergenic | 50.0% |
| ! | TTGACTCTGAGAGGAAGAGG+AGG | + | chr2.4:51472108-51472127 | MS.gene07728:CDS | 50.0% |
| !! | GAAAGAGTGGCTTTGGTGGA+AGG | - | chr2.4:51474597-51474616 | None:intergenic | 50.0% |
| !! | GTGAGAAAGAGTGGCTTTGG+TGG | - | chr2.4:51474601-51474620 | None:intergenic | 50.0% |
| ATGACCAAGACCTTACCGCG+TGG | + | chr2.4:51474464-51474483 | MS.gene07728:intron | 55.0% | |
| CCAGATGGTGCAGCATCATC+AGG | + | chr2.4:51472068-51472087 | MS.gene07728:CDS | 55.0% | |
| TGAGAGCTGCAACGGCTGTT+TGG | - | chr2.4:51477122-51477141 | None:intergenic | 55.0% | |
| TTGCAGCTGGGGATTGGATG+AGG | + | chr2.4:51472016-51472035 | MS.gene07728:intron | 55.0% | |
| TTGTGGTTGCAGCTGGGGAT+TGG | + | chr2.4:51472010-51472029 | MS.gene07728:intron | 55.0% | |
| ! | CCTGATGATGCTGCACCATC+TGG | - | chr2.4:51472071-51472090 | None:intergenic | 55.0% |
| CCTACCATTGCCACACCACC+AGG | + | chr2.4:51473286-51473305 | MS.gene07728:intron | 60.0% | |
| ! | CCTGGTGGTGTGGCAATGGT+AGG | - | chr2.4:51473289-51473308 | None:intergenic | 60.0% |
| ! | GGTACCTGGTGGTGTGGCAA+TGG | - | chr2.4:51473293-51473312 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 51471840 | 51477170 | 51471840 | ID=MS.gene07728 |
| chr2.4 | mRNA | 51471840 | 51477170 | 51471840 | ID=MS.gene07728.t1;Parent=MS.gene07728 |
| chr2.4 | exon | 51471840 | 51471913 | 51471840 | ID=MS.gene07728.t1.exon1;Parent=MS.gene07728.t1 |
| chr2.4 | CDS | 51471840 | 51471913 | 51471840 | ID=cds.MS.gene07728.t1;Parent=MS.gene07728.t1 |
| chr2.4 | exon | 51472022 | 51472187 | 51472022 | ID=MS.gene07728.t1.exon2;Parent=MS.gene07728.t1 |
| chr2.4 | CDS | 51472022 | 51472187 | 51472022 | ID=cds.MS.gene07728.t1;Parent=MS.gene07728.t1 |
| chr2.4 | exon | 51472793 | 51473026 | 51472793 | ID=MS.gene07728.t1.exon3;Parent=MS.gene07728.t1 |
| chr2.4 | CDS | 51472793 | 51473026 | 51472793 | ID=cds.MS.gene07728.t1;Parent=MS.gene07728.t1 |
| chr2.4 | exon | 51473594 | 51473764 | 51473594 | ID=MS.gene07728.t1.exon4;Parent=MS.gene07728.t1 |
| chr2.4 | CDS | 51473594 | 51473764 | 51473594 | ID=cds.MS.gene07728.t1;Parent=MS.gene07728.t1 |
| chr2.4 | exon | 51477081 | 51477170 | 51477081 | ID=MS.gene07728.t1.exon5;Parent=MS.gene07728.t1 |
| chr2.4 | CDS | 51477081 | 51477170 | 51477081 | ID=cds.MS.gene07728.t1;Parent=MS.gene07728.t1 |
| Gene Sequence |
| Protein sequence |
