Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08119.t1 | XP_013460123.1 | 99.2 | 840 | 7 | 0 | 1 | 840 | 1 | 840 | 0.00E+00 | 1693.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08119.t1 | P53537 | 94.8 | 842 | 42 | 1 | 1 | 840 | 1 | 842 | 0.0e+00 | 1626.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08119.t1 | A0A072UWD1 | 99.2 | 840 | 7 | 0 | 1 | 840 | 1 | 840 | 0.0e+00 | 1693.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051244 | MS.gene08119 | 0.828641 | 8.03E-55 | -1.69E-46 |
| MS.gene055501 | MS.gene08119 | 0.839521 | 1.51E-57 | -1.69E-46 |
| MS.gene05625 | MS.gene08119 | 0.990428 | 1.38E-182 | -1.69E-46 |
| MS.gene056305 | MS.gene08119 | 0.839361 | 1.66E-57 | -1.69E-46 |
| MS.gene056442 | MS.gene08119 | 0.840713 | 7.37E-58 | -1.69E-46 |
| MS.gene058746 | MS.gene08119 | 0.811687 | 6.18E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08119.t1 | MTR_3g462340 | 99.167 | 840 | 7 | 0 | 1 | 840 | 1 | 840 | 0.0 | 1735 |
| MS.gene08119.t1 | MTR_2g014460 | 48.783 | 822 | 403 | 10 | 24 | 840 | 180 | 988 | 0.0 | 809 |
| MS.gene08119.t1 | MTR_4g082950 | 66.176 | 408 | 136 | 2 | 435 | 840 | 574 | 981 | 0.0 | 582 |
| MS.gene08119.t1 | MTR_4g082950 | 56.044 | 455 | 194 | 3 | 16 | 464 | 71 | 525 | 5.14e-173 | 526 |
| MS.gene08119.t1 | MTR_0288s0040 | 62.260 | 416 | 152 | 2 | 24 | 434 | 55 | 470 | 2.07e-179 | 540 |
| MS.gene08119.t1 | MTR_0288s0040 | 63.488 | 367 | 122 | 1 | 440 | 806 | 542 | 896 | 9.08e-164 | 499 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08119.t1 | AT3G46970 | 83.035 | 837 | 138 | 2 | 8 | 840 | 5 | 841 | 0.0 | 1470 |
| MS.gene08119.t1 | AT3G29320 | 60.388 | 876 | 290 | 6 | 22 | 840 | 87 | 962 | 0.0 | 1100 |
Find 219 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGCTTGCTTCTTGCTTTC+TGG | 0.078572 | 3.3:-50005905 | MS.gene08119:CDS |
| TCAATATATCACTGTGTAAT+TGG | 0.122849 | 3.3:+50003949 | None:intergenic |
| CTCAGTATGCTAAGGAAATT+TGG | 0.156164 | 3.3:-50000775 | MS.gene08119:CDS |
| TTAACCACTTAGTGATTATT+TGG | 0.195969 | 3.3:+50003817 | None:intergenic |
| AAGAGGCAAAGAAGTTTATT+AGG | 0.200703 | 3.3:-50001507 | MS.gene08119:CDS |
| ACTTTCCAACATGCGCATTT+TGG | 0.216640 | 3.3:-50004269 | MS.gene08119:CDS |
| CCATCCGAACAACTGGCTTC+TGG | 0.226210 | 3.3:+50004236 | None:intergenic |
| GCCACCGATACATTGTAATT+TGG | 0.237509 | 3.3:+50002481 | None:intergenic |
| TTGAATGGGTGCCTTATTAT+AGG | 0.250074 | 3.3:-50002370 | MS.gene08119:CDS |
| GACCATTTCTCCAGTGCTTC+GGG | 0.261697 | 3.3:+50004491 | None:intergenic |
| AACACTTAATTTACCTGCTT+GGG | 0.262521 | 3.3:-50005872 | MS.gene08119:CDS |
| TGAATGTCAAATAGAGTATC+AGG | 0.269003 | 3.3:+50003553 | None:intergenic |
| GATTCATTGGAAGGAAATTC+TGG | 0.270874 | 3.3:-50001445 | MS.gene08119:CDS |
| TTGCAAATTATGTTTCAATA+TGG | 0.291770 | 3.3:-50003914 | MS.gene08119:CDS |
| CAACCCATTGCTTGATTCAT+TGG | 0.306445 | 3.3:-50001458 | MS.gene08119:CDS |
| TTTACACTTACCTTCCATTA+GGG | 0.309550 | 3.3:+50005596 | None:intergenic |
| ATTTACACTTACCTTCCATT+AGG | 0.314637 | 3.3:+50005595 | None:intergenic |
| AGAGTTGATGCGTTTACTTA+TGG | 0.314885 | 3.3:-50004732 | MS.gene08119:CDS |
| GTGTGTATGCCAGCCGAAAA+TGG | 0.331791 | 3.3:-50005478 | MS.gene08119:intron |
| CATCTAAAGTACCTATAATA+AGG | 0.332291 | 3.3:+50002359 | None:intergenic |
| GCTTATGATGTGCCAATTCC+TGG | 0.336675 | 3.3:-50005428 | MS.gene08119:CDS |
| GCGAAGACTGATGGTGTTCT+TGG | 0.337746 | 3.3:+50005397 | None:intergenic |
| CCTGCCTCCTCTCCTTGAAC+CGG | 0.339166 | 3.3:+50004831 | None:intergenic |
| GTGTTCTTGGTTTGGTATCC+AGG | 0.343283 | 3.3:+50005410 | None:intergenic |
| ATGGAGCTAATGTGGAAATC+AGG | 0.343321 | 3.3:-50002339 | MS.gene08119:CDS |
| GCATCAACTCTGGTATTGAT+AGG | 0.348225 | 3.3:+50004744 | None:intergenic |
| TTGGAAGGAAATTCTGGTTA+TGG | 0.355039 | 3.3:-50001439 | MS.gene08119:CDS |
| TTGGTTTGGTATCCAGGAAT+TGG | 0.357731 | 3.3:+50005416 | None:intergenic |
| TTGTACCCTATCAGATTCTT+TGG | 0.358703 | 3.3:-50005634 | MS.gene08119:CDS |
| CATCCGAACAACTGGCTTCT+GGG | 0.363739 | 3.3:+50004237 | None:intergenic |
| AGACCATTTCTCCAGTGCTT+CGG | 0.373578 | 3.3:+50004490 | None:intergenic |
| AACATGAAATTTGCTTTGAA+TGG | 0.374053 | 3.3:-50002385 | MS.gene08119:CDS |
| TTTATTAGGAGTGGGGTGTT+TGG | 0.376904 | 3.3:-50001493 | MS.gene08119:CDS |
| GCCTCTTCAAATCGAGGATC+CGG | 0.386133 | 3.3:+50001523 | None:intergenic |
| GCAAAGAAGTTTATTAGGAG+TGG | 0.386572 | 3.3:-50001502 | MS.gene08119:CDS |
| CAACACTTAATTTACCTGCT+TGG | 0.390154 | 3.3:-50005873 | MS.gene08119:CDS |
| AAATTTGCCATCCGAACAAC+TGG | 0.392112 | 3.3:+50004229 | None:intergenic |
| ATGTCTATCTTAAGTACTGC+TGG | 0.395817 | 3.3:-50000830 | MS.gene08119:CDS |
| CGTGGTGATTACTTTCTTGT+TGG | 0.397265 | 3.3:-50001415 | MS.gene08119:CDS |
| ACACCATCAGTCTTCGCCTC+TGG | 0.401475 | 3.3:-50005391 | MS.gene08119:CDS |
| GCTTCACTCACGAGCTCAAC+AGG | 0.402172 | 3.3:-50005297 | MS.gene08119:intron |
| CTTATTATAGGTACTTTAGA+TGG | 0.405360 | 3.3:-50002358 | MS.gene08119:CDS |
| CGAGCCTTGACCAATGCTAT+TGG | 0.405477 | 3.3:-50006241 | MS.gene08119:CDS |
| TTCTTGCTTTCTGGATTCCA+TGG | 0.411344 | 3.3:-50005896 | MS.gene08119:CDS |
| CGACTTACACAAATGCTAAA+CGG | 0.415136 | 3.3:-50002768 | MS.gene08119:CDS |
| GACTGATGGTGTTCTTGGTT+TGG | 0.418565 | 3.3:+50005402 | None:intergenic |
| TGTTGGGATAGCTCACTTCC+TGG | 0.419593 | 3.3:+50002445 | None:intergenic |
| TCCTGAGCATCCACGTAGCT+TGG | 0.420103 | 3.3:+50001382 | None:intergenic |
| TCCCCGAAGCACTGGAGAAA+TGG | 0.420397 | 3.3:-50004493 | MS.gene08119:CDS |
| CCACCTTCTGTGGCATCCCC+AGG | 0.425804 | 3.3:+50005012 | None:intergenic |
| ACCTGGCCAAAGAATCTGAT+AGG | 0.427402 | 3.3:+50005628 | None:intergenic |
| TGTTCGTGATCGTCTCGTTC+AGG | 0.427671 | 3.3:-50007165 | MS.gene08119:intron |
| CAATATATCACTGTGTAATT+GGG | 0.428524 | 3.3:+50003950 | None:intergenic |
| CACTGTCCTCCCCGAAGCAC+TGG | 0.430389 | 3.3:-50004501 | MS.gene08119:CDS |
| GATAAGTAGTAAGTTTGCTT+GGG | 0.432852 | 3.3:+50006283 | None:intergenic |
| TGATAAGTAGTAAGTTTGCT+TGG | 0.439266 | 3.3:+50006282 | None:intergenic |
| CAAAGAAGTTTATTAGGAGT+GGG | 0.443416 | 3.3:-50001501 | MS.gene08119:CDS |
| GGACATCATTTCCCGGTTCA+AGG | 0.446314 | 3.3:-50004843 | MS.gene08119:CDS |
| AAGTTCCAAAATAAAACTAA+TGG | 0.448080 | 3.3:-50003885 | MS.gene08119:CDS |
| GTGATTATTTGGCTTAGCTC+AGG | 0.450262 | 3.3:+50003828 | None:intergenic |
| AATTACAGGACATCATTTCC+CGG | 0.450355 | 3.3:-50004850 | MS.gene08119:intron |
| GCTGATGCTTTGCGCAAGTT+CGG | 0.450707 | 3.3:-50006193 | MS.gene08119:CDS |
| ATGTTAGAAGCAATCTCATC+AGG | 0.454704 | 3.3:+50007269 | None:intergenic |
| TTATCAATGGAGTTCCTTCA+AGG | 0.457142 | 3.3:-50006265 | MS.gene08119:CDS |
| AGGAGGAAGTTGCTGAGGAC+TGG | 0.459433 | 3.3:-50005792 | MS.gene08119:CDS |
| CCTGAGCATCCACGTAGCTT+GGG | 0.460185 | 3.3:+50001383 | None:intergenic |
| CTTCCAATGAATCAAGCAAT+GGG | 0.462569 | 3.3:+50001455 | None:intergenic |
| GCTAGTGGATTTGCCACAGC+TGG | 0.463141 | 3.3:+50007299 | None:intergenic |
| CACCATCAGTCTTCGCCTCT+GGG | 0.463304 | 3.3:-50005390 | MS.gene08119:CDS |
| ACTGCACGCACTGTCATGAT+TGG | 0.464857 | 3.3:-50002805 | MS.gene08119:CDS |
| CTTATGGATGAAGAAGGGCT+TGG | 0.467886 | 3.3:-50004716 | MS.gene08119:CDS |
| AGGAGAGGAGGCAGGGACCT+TGG | 0.468311 | 3.3:-50004823 | MS.gene08119:CDS |
| CCGGTTCAAGGAGAGGAGGC+AGG | 0.470005 | 3.3:-50004831 | MS.gene08119:CDS |
| GCACTAGGAAATGGTGGTCT+TGG | 0.471328 | 3.3:-50005928 | MS.gene08119:CDS |
| CCATTGCTTGATTCATTGGA+AGG | 0.471435 | 3.3:-50001454 | MS.gene08119:CDS |
| GCCTGCGGTACTAATATGTT+GGG | 0.473266 | 3.3:+50002429 | None:intergenic |
| TGGTCAAGGCTCGACCTTGA+AGG | 0.476017 | 3.3:+50006251 | None:intergenic |
| CCCAAGCTACGTGGATGCTC+AGG | 0.476610 | 3.3:-50001383 | MS.gene08119:CDS |
| ATTCAAATTTCCAATAGCAT+TGG | 0.479715 | 3.3:+50006231 | None:intergenic |
| CCTTCCAATGAATCAAGCAA+TGG | 0.482739 | 3.3:+50001454 | None:intergenic |
| ACATGAAATTTGCTTTGAAT+GGG | 0.484003 | 3.3:-50002384 | MS.gene08119:CDS |
| CCCTATCAGATTCTTTGGCC+AGG | 0.486248 | 3.3:-50005629 | MS.gene08119:CDS |
| ATCCCCAGAAGCCAGTTGTT+CGG | 0.488192 | 3.3:-50004240 | MS.gene08119:CDS |
| CGTTTACTTATGGATGAAGA+AGG | 0.488789 | 3.3:-50004722 | MS.gene08119:CDS |
| TGTGGTCAATAGCTACTTGA+AGG | 0.489084 | 3.3:-50002698 | MS.gene08119:intron |
| GGCTTGGATGGGATGAAGCA+TGG | 0.489941 | 3.3:-50004700 | MS.gene08119:CDS |
| CAGGTCGAGGTTAACCCTAA+TGG | 0.489967 | 3.3:-50005610 | MS.gene08119:CDS |
| TTGTGATTTGAAGTTCAAAC+CGG | 0.490504 | 3.3:-50001542 | MS.gene08119:intron |
| GGAGGCAGGGACCTTGGAAC+TGG | 0.491790 | 3.3:-50004817 | MS.gene08119:CDS |
| AGAGTGGTCGTCTGCAAAGA+TGG | 0.498113 | 3.3:-50003632 | MS.gene08119:CDS |
| TTCACTCTCAAGATCCAGTC+GGG | 0.498449 | 3.3:+50004291 | None:intergenic |
| GAAGGAAAGAGAGGATGGAC+TGG | 0.498810 | 3.3:-50002251 | MS.gene08119:intron |
| CAAACAGAAGTTTAGCCCTT+GGG | 0.500543 | 3.3:-50005677 | MS.gene08119:intron |
| TGCCTGCGGTACTAATATGT+TGG | 0.500593 | 3.3:+50002428 | None:intergenic |
| CAGTACGTTCTGAAGGTGAC+AGG | 0.500818 | 3.3:-50003589 | MS.gene08119:CDS |
| CCAAACAGAAGTTTAGCCCT+TGG | 0.504145 | 3.3:-50005678 | MS.gene08119:intron |
| TGGATGAAGAAGGGCTTGGA+TGG | 0.504963 | 3.3:-50004712 | MS.gene08119:CDS |
| GTGGCGGAGGTGCTTATCCC+AGG | 0.507556 | 3.3:-50002463 | MS.gene08119:CDS |
| AGCAACCTTCGTCGGAAACT+CGG | 0.508546 | 3.3:+50004793 | None:intergenic |
| GCAAACTTACTACTTATCAA+TGG | 0.509704 | 3.3:-50006278 | MS.gene08119:CDS |
| GATAATCGCAAAAGAAGGTC+AGG | 0.510735 | 3.3:-50005812 | MS.gene08119:CDS |
| CAGATTCTTTGGCCAGGTCG+AGG | 0.513698 | 3.3:-50005623 | MS.gene08119:CDS |
| ATCTTAAGTACTGCTGGGAG+TGG | 0.515688 | 3.3:-50000824 | MS.gene08119:CDS |
| GGCTATCTATTATAGGTGAA+TGG | 0.517585 | 3.3:-50003978 | MS.gene08119:intron |
| AAGGATGCAGCACTAGGAAA+TGG | 0.519194 | 3.3:-50005937 | MS.gene08119:CDS |
| CCTGGGGATGCCACAGAAGG+TGG | 0.519394 | 3.3:-50005012 | MS.gene08119:CDS |
| TGGAGCTAATGTGGAAATCA+GGG | 0.523433 | 3.3:-50002338 | MS.gene08119:CDS |
| GTGGGAAGTTCAGCAGTGAC+AGG | 0.524513 | 3.3:-50000805 | MS.gene08119:CDS |
| CAGGAAAAGGATGCAGCACT+AGG | 0.524810 | 3.3:-50005943 | MS.gene08119:CDS |
| TGCTAAACGGATAGTCAAGC+TGG | 0.525169 | 3.3:-50002755 | MS.gene08119:CDS |
| GGTTCTAAAGTAGAGACTAA+TGG | 0.527890 | 3.3:-50007347 | MS.gene08119:CDS |
| CACTGTCATGATTGGAGGAA+AGG | 0.529940 | 3.3:-50002797 | MS.gene08119:CDS |
| TTCCCAGAGGCGAAGACTGA+TGG | 0.530304 | 3.3:+50005388 | None:intergenic |
| ACATATTAGTACCGCAGGCA+TGG | 0.531917 | 3.3:-50002425 | MS.gene08119:CDS |
| TTCTTTGCCTCTTCAAATCG+AGG | 0.532927 | 3.3:+50001517 | None:intergenic |
| ACTCTGGTATTGATAGGGTC+GGG | 0.533523 | 3.3:+50004750 | None:intergenic |
| AAACAGATAATCGCAAAAGA+AGG | 0.533857 | 3.3:-50005817 | MS.gene08119:CDS |
| GCACGCACTGTCATGATTGG+AGG | 0.535278 | 3.3:-50002802 | MS.gene08119:CDS |
| TACTTTAGATGGAGCTAATG+TGG | 0.537773 | 3.3:-50002347 | MS.gene08119:CDS |
| TTACAATGTATCGGTGGCGG+AGG | 0.537864 | 3.3:-50002476 | MS.gene08119:CDS |
| ACACTTAATTTACCTGCTTG+GGG | 0.538160 | 3.3:-50005871 | MS.gene08119:CDS |
| ATAAGTAAACGCATCAACTC+TGG | 0.539867 | 3.3:+50004734 | None:intergenic |
| TGTTCAAGCTCAAACTTGAA+AGG | 0.539884 | 3.3:+50007212 | None:intergenic |
| GGAAATTCTGGTTATGGTCG+TGG | 0.539921 | 3.3:-50001433 | MS.gene08119:CDS |
| GCCAGCCGAAAATGGATTGG+CGG | 0.540426 | 3.3:-50005470 | MS.gene08119:intron |
| AACTCTGGTATTGATAGGGT+CGG | 0.542303 | 3.3:+50004749 | None:intergenic |
| GCTTGGATGGGATGAAGCAT+GGG | 0.543851 | 3.3:-50004699 | MS.gene08119:CDS |
| ATGGCATTACACCTCGAAGA+TGG | 0.545189 | 3.3:-50003866 | MS.gene08119:CDS |
| CAGAAGGTGGAAAACTTCTA+CGG | 0.546061 | 3.3:-50004999 | MS.gene08119:CDS |
| GATGGCTAATAAGCAGCGCT+TGG | 0.548918 | 3.3:-50003614 | MS.gene08119:CDS |
| ACCGATCTTGACTTACTGAC+AGG | 0.549416 | 3.3:-50003777 | MS.gene08119:CDS |
| CTGCCTCCTCTCCTTGAACC+GGG | 0.550039 | 3.3:+50004832 | None:intergenic |
| TCCCAACATATTAGTACCGC+AGG | 0.550701 | 3.3:-50002430 | MS.gene08119:CDS |
| ACTTGAAGAAATAACCGAGC+AGG | 0.556341 | 3.3:-50006164 | MS.gene08119:intron |
| CATGGTGCAGTGACAAGAAA+AGG | 0.556413 | 3.3:-50000862 | MS.gene08119:intron |
| CTGAGGAAGGAAAGAGAGGA+TGG | 0.557425 | 3.3:-50002256 | MS.gene08119:CDS |
| GACAATTGCTCAGTATGCTA+AGG | 0.558452 | 3.3:-50000783 | MS.gene08119:CDS |
| TAGGAAATGGTGGTCTTGGT+CGG | 0.558516 | 3.3:-50005924 | MS.gene08119:CDS |
| ATTGTCCAAAATGCGCATGT+TGG | 0.561027 | 3.3:+50004264 | None:intergenic |
| TGATGTACCTCGACTGAGGA+AGG | 0.561412 | 3.3:-50002269 | MS.gene08119:CDS |
| GAAATTGCTTCCTCGTCACA+TGG | 0.561842 | 3.3:-50004453 | MS.gene08119:CDS |
| GTAGCTGCCTCTTGTACTCG+TGG | 0.562138 | 3.3:+50003518 | None:intergenic |
| ATCCGAACAACTGGCTTCTG+GGG | 0.563192 | 3.3:+50004238 | None:intergenic |
| CATCAACTCTGGTATTGATA+GGG | 0.569093 | 3.3:+50004745 | None:intergenic |
| AAAGAAGTTTATTAGGAGTG+GGG | 0.569398 | 3.3:-50001500 | MS.gene08119:CDS |
| TCATTTCCCGGTTCAAGGAG+AGG | 0.571549 | 3.3:-50004838 | MS.gene08119:CDS |
| TAAGCCAAATAATCACTAAG+TGG | 0.573231 | 3.3:-50003821 | MS.gene08119:CDS |
| AGCGTATCCACGAGTACAAG+AGG | 0.573947 | 3.3:-50003525 | MS.gene08119:CDS |
| GGATGAAGAAGGGCTTGGAT+GGG | 0.574485 | 3.3:-50004711 | MS.gene08119:CDS |
| CACTTAATTTACCTGCTTGG+GGG | 0.574585 | 3.3:-50005870 | MS.gene08119:CDS |
| TGTCTATCTTAAGTACTGCT+GGG | 0.576462 | 3.3:-50000829 | MS.gene08119:CDS |
| ACCTGTCAGTAAGTCAAGAT+CGG | 0.576769 | 3.3:+50003776 | None:intergenic |
| AATGATAAGTAAAACCCGAC+TGG | 0.577293 | 3.3:-50004305 | MS.gene08119:CDS |
| AGGTAAATTAAGTGTTGCCA+TGG | 0.577786 | 3.3:+50005879 | None:intergenic |
| CGGTTCAAGGAGAGGAGGCA+GGG | 0.579612 | 3.3:-50004830 | MS.gene08119:CDS |
| CATTAGGGTTAACCTCGACC+TGG | 0.581641 | 3.3:+50005611 | None:intergenic |
| AATTGTACAGCAACCTTCGT+CGG | 0.581739 | 3.3:+50004785 | None:intergenic |
| TCTGTTTAAATAGTCCGTAC+CGG | 0.582859 | 3.3:+50005833 | None:intergenic |
| AGGTCAGGAGGAAGTTGCTG+AGG | 0.588335 | 3.3:-50005797 | MS.gene08119:CDS |
| CATCCGCTGTCGCACCAAAG+AGG | 0.589453 | 3.3:+50002290 | None:intergenic |
| GTTGGGATAGCTCACTTCCT+GGG | 0.589645 | 3.3:+50002446 | None:intergenic |
| TTTCCTCTTTGGTGCGACAG+CGG | 0.590527 | 3.3:-50002293 | MS.gene08119:CDS |
| ATTTCCAATAGCATTGGTCA+AGG | 0.590725 | 3.3:+50006237 | None:intergenic |
| AAATTACAATGTATCGGTGG+CGG | 0.590929 | 3.3:-50002479 | MS.gene08119:CDS |
| CCAGAAGCCAGTTGTTCGGA+TGG | 0.591835 | 3.3:-50004236 | MS.gene08119:CDS |
| AATCGCAAAAGAAGGTCAGG+AGG | 0.592795 | 3.3:-50005809 | MS.gene08119:CDS |
| AGGAGATGAGCCCTGAAGAA+CGG | 0.597395 | 3.3:-50002837 | MS.gene08119:CDS |
| TCTCTTTCCTTCCTCAGTCG+AGG | 0.597849 | 3.3:+50002262 | None:intergenic |
| TCGTGCCTCACAATTTCCCA+AGG | 0.598830 | 3.3:+50005661 | None:intergenic |
| TTCTGCTAAAGTTCCAGCTG+TGG | 0.599697 | 3.3:-50007312 | MS.gene08119:CDS |
| GGAAACTCGGACCAGTTCCA+AGG | 0.600518 | 3.3:+50004806 | None:intergenic |
| AGTTGCTGAGGACTGGCTCG+AGG | 0.600739 | 3.3:-50005785 | MS.gene08119:intron |
| GTCAAGCTGGTCAATGATGT+TGG | 0.601373 | 3.3:-50002742 | MS.gene08119:CDS |
| TTAGCCCTTGGGAAATTGTG+AGG | 0.601926 | 3.3:-50005666 | MS.gene08119:CDS |
| TATCCTGGGGATGCCACAGA+AGG | 0.602412 | 3.3:-50005015 | MS.gene08119:CDS |
| GTTTACTTATGGATGAAGAA+GGG | 0.604886 | 3.3:-50004721 | MS.gene08119:CDS |
| CTGGTCCGAGTTTCCGACGA+AGG | 0.604965 | 3.3:-50004798 | MS.gene08119:CDS |
| CCAGCTGAAATTATGGTACA+CGG | 0.605531 | 3.3:+50000738 | None:intergenic |
| TTCAAGTAGCTATTGACCAC+AGG | 0.606557 | 3.3:+50002700 | None:intergenic |
| ACCGGATCCTCGATTTGAAG+AGG | 0.608188 | 3.3:-50001524 | MS.gene08119:CDS |
| AATGGTCTCAGTCTGTAATG+TGG | 0.608222 | 3.3:-50004475 | MS.gene08119:CDS |
| TCTTAAGTACTGCTGGGAGT+GGG | 0.611052 | 3.3:-50000823 | MS.gene08119:CDS |
| AGTGAGGACTATATTGAGCA+TGG | 0.612263 | 3.3:+50007240 | None:intergenic |
| ACACAGTGATATATTGAAGT+CGG | 0.612649 | 3.3:-50003943 | MS.gene08119:CDS |
| TGGTATTGATAGGGTCGGGT+GGG | 0.615079 | 3.3:+50004754 | None:intergenic |
| CTTGGCACAGTACGTTCTGA+AGG | 0.618440 | 3.3:-50003596 | MS.gene08119:CDS |
| GTGGAAATCAGGGAAGAGAT+CGG | 0.619019 | 3.3:-50002328 | MS.gene08119:CDS |
| TATGGTTTGAGGTACCGGTA+CGG | 0.619433 | 3.3:-50005847 | MS.gene08119:CDS |
| CTGGTATTGATAGGGTCGGG+TGG | 0.620002 | 3.3:+50004753 | None:intergenic |
| TATGCCAGCCGAAAATGGAT+TGG | 0.620660 | 3.3:-50005473 | MS.gene08119:intron |
| GCCACTTGCTTCCATGCCTG+CGG | 0.621602 | 3.3:+50002414 | None:intergenic |
| AGTACGTTCTGAAGGTGACA+GGG | 0.624712 | 3.3:-50003588 | MS.gene08119:CDS |
| TGTGCCAAATTACAATGTAT+CGG | 0.631942 | 3.3:-50002485 | MS.gene08119:CDS |
| TGGATGGGATGAAGCATGGG+AGG | 0.633226 | 3.3:-50004696 | MS.gene08119:CDS |
| ACCATTTCTCCAGTGCTTCG+GGG | 0.634093 | 3.3:+50004492 | None:intergenic |
| CCTGGCCAAAGAATCTGATA+GGG | 0.634245 | 3.3:+50005629 | None:intergenic |
| GATGCAGCACTAGGAAATGG+TGG | 0.643582 | 3.3:-50005934 | MS.gene08119:CDS |
| TCGGATGGCAAATTTGTGTG+TGG | 0.644056 | 3.3:-50004221 | MS.gene08119:CDS |
| GAATGTCAAATAGAGTATCA+GGG | 0.648034 | 3.3:+50003554 | None:intergenic |
| GTTCACTCTCAAGATCCAGT+CGG | 0.648340 | 3.3:+50004290 | None:intergenic |
| TCGAGGTTAACCCTAATGGA+AGG | 0.648776 | 3.3:-50005606 | MS.gene08119:intron |
| TTATGACTTCCCAAGCTACG+TGG | 0.654121 | 3.3:-50001392 | MS.gene08119:CDS |
| TCGACTGAGGAAGGAAAGAG+AGG | 0.654363 | 3.3:-50002260 | MS.gene08119:CDS |
| TTTCCCGGTTCAAGGAGAGG+AGG | 0.656952 | 3.3:-50004835 | MS.gene08119:CDS |
| ACCGCAGGCATGGAAGCAAG+TGG | 0.664367 | 3.3:-50002415 | MS.gene08119:CDS |
| ATTTCTCCAGTGCTTCGGGG+AGG | 0.665090 | 3.3:+50004495 | None:intergenic |
| GGTGCAGTGACAAGAAAAGG+TGG | 0.675521 | 3.3:-50000859 | MS.gene08119:intron |
| CGTGCCTCACAATTTCCCAA+GGG | 0.676969 | 3.3:+50005662 | None:intergenic |
| GCCAAATTACAATGTATCGG+TGG | 0.679301 | 3.3:-50002482 | MS.gene08119:CDS |
| TCTATGATTTCCATGTGACG+AGG | 0.683452 | 3.3:+50004443 | None:intergenic |
| CACAAGCTTTAGCTTCCCAG+AGG | 0.688674 | 3.3:+50005375 | None:intergenic |
| CGGATGATGTACCTCGACTG+AGG | 0.697248 | 3.3:-50002273 | MS.gene08119:CDS |
| TCTAAAGTAGAGACTAATGG+TGG | 0.700647 | 3.3:-50007344 | MS.gene08119:CDS |
| ATGAAGATCTGCAAGCAGAG+TGG | 0.702272 | 3.3:-50003648 | MS.gene08119:CDS |
| CTTACTGACAGGTCTTCGAG+AGG | 0.704813 | 3.3:-50003766 | MS.gene08119:intron |
| TATTGTAAACAGTGATCCTG+TGG | 0.708804 | 3.3:-50002716 | MS.gene08119:CDS |
| AACTTGAAAGGTGAAAAGTG+AGG | 0.718109 | 3.3:+50007224 | None:intergenic |
| GTACGTTCTGAAGGTGACAG+GGG | 0.729253 | 3.3:-50003587 | MS.gene08119:CDS |
| AATCAGGGAAGAGATCGGTG+AGG | 0.747097 | 3.3:-50002323 | MS.gene08119:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAAAAGGAAAATG+TGG | + | chr3.3:50006215-50006234 | None:intergenic | 15.0% |
| !! | AAATATAAAAAGGAAAATGT+GGG | + | chr3.3:50006214-50006233 | None:intergenic | 15.0% |
| !! | AAATTTATTTACTTCATGTT+GGG | - | chr3.3:50004099-50004118 | MS.gene08119:intron | 15.0% |
| !! | ATTTCACAAATAATATAAAG+AGG | + | chr3.3:50004067-50004086 | None:intergenic | 15.0% |
| !! | TTTCACAAATAATATAAAGA+GGG | + | chr3.3:50004066-50004085 | None:intergenic | 15.0% |
| !!! | AAACAATGAATATATTTTGA+TGG | - | chr3.3:50006077-50006096 | MS.gene08119:intron | 15.0% |
| !!! | AATTTAAAGCTAATTAACTA+AGG | - | chr3.3:50001591-50001610 | MS.gene08119:intron | 15.0% |
| !!! | ATATAAAAGTACTTATAGTT+TGG | - | chr3.3:50002598-50002617 | MS.gene08119:intron | 15.0% |
| !!! | ATTTAAAGCTAATTAACTAA+GGG | - | chr3.3:50001592-50001611 | MS.gene08119:intron | 15.0% |
| !!! | CGTTTTAAAAAATTAGAAAA+TGG | + | chr3.3:50006285-50006304 | None:intergenic | 15.0% |
| !!! | GATTTATTTTTATTCAATGA+TGG | - | chr3.3:50002757-50002776 | MS.gene08119:CDS | 15.0% |
| !!! | TAAGTGTATATATTGTTTTT+TGG | - | chr3.3:50007204-50007223 | MS.gene08119:CDS | 15.0% |
| !!! | TTTGGTAAAACATTATTTTA+AGG | + | chr3.3:50004878-50004897 | None:intergenic | 15.0% |
| !! | AAAGAAGTAAAAAAGGTAAA+AGG | + | chr3.3:50001465-50001484 | None:intergenic | 20.0% |
| !! | AAATAATATAAAGAGGGTTA+TGG | + | chr3.3:50004060-50004079 | None:intergenic | 20.0% |
| !! | AAGTTCCAAAATAAAACTAA+TGG | - | chr3.3:50004213-50004232 | MS.gene08119:CDS | 20.0% |
| !! | ACAATCATTATGCAAATATT+AGG | + | chr3.3:50006516-50006535 | None:intergenic | 20.0% |
| !! | ATTAGATGTGATATAAAACT+TGG | + | chr3.3:50006994-50007013 | None:intergenic | 20.0% |
| !! | CAATCATTATGCAAATATTA+GGG | + | chr3.3:50006515-50006534 | None:intergenic | 20.0% |
| !! | CTATAGATATAAAAAGTTGA+AGG | - | chr3.3:50004622-50004641 | MS.gene08119:intron | 20.0% |
| !! | CTTGAATTTGTAAAATAGTT+TGG | + | chr3.3:50007049-50007068 | None:intergenic | 20.0% |
| !! | GAAATTTATTTACTTCATGT+TGG | - | chr3.3:50004098-50004117 | MS.gene08119:intron | 20.0% |
| !! | GTTGAAGTGAAAATATAAAA+AGG | + | chr3.3:50006224-50006243 | None:intergenic | 20.0% |
| !! | TATATGATGATACATTTACT+TGG | - | chr3.3:50000956-50000975 | MS.gene08119:intron | 20.0% |
| !! | TTACTAAAATAACGTCTAAT+AGG | + | chr3.3:50006877-50006896 | None:intergenic | 20.0% |
| !! | TTAGTACCTCTAAATAAATT+TGG | - | chr3.3:50004958-50004977 | MS.gene08119:intron | 20.0% |
| !! | TTGCAAATTATGTTTCAATA+TGG | - | chr3.3:50004184-50004203 | MS.gene08119:intron | 20.0% |
| !! | TTGTGATGATATGTTTATTA+AGG | - | chr3.3:50005545-50005564 | MS.gene08119:intron | 20.0% |
| !!! | AAAAAAATGACATTTTTTGC+AGG | + | chr3.3:50006032-50006051 | None:intergenic | 20.0% |
| !!! | AAACAGTTTGATTTAATTAG+TGG | + | chr3.3:50007104-50007123 | None:intergenic | 20.0% |
| !!! | AAAGAAACTGAAGTATTTTT+AGG | - | chr3.3:50006478-50006497 | MS.gene08119:intron | 20.0% |
| !!! | AGTATTTTTAGGAAGTAAAT+AGG | - | chr3.3:50006489-50006508 | MS.gene08119:intron | 20.0% |
| !!! | ATACACTTACGATAATTTTA+TGG | + | chr3.3:50007193-50007212 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTGTAGATTTGTT+CGG | - | chr3.3:50003055-50003074 | MS.gene08119:intron | 20.0% |
| !!! | CATATTTTTCATAAAATGCT+GGG | + | chr3.3:50005204-50005223 | None:intergenic | 20.0% |
| !!! | CATTATTTTAAGGATTGATA+TGG | + | chr3.3:50004868-50004887 | None:intergenic | 20.0% |
| !!! | CCACTTTTAAAATTTTGTAT+CGG | + | chr3.3:50006106-50006125 | None:intergenic | 20.0% |
| !!! | CGATACAAAATTTTAAAAGT+GGG | - | chr3.3:50006104-50006123 | MS.gene08119:intron | 20.0% |
| !!! | GATACAAAATTTTAAAAGTG+GGG | - | chr3.3:50006105-50006124 | MS.gene08119:intron | 20.0% |
| !!! | TAATGCCATTAGTTTTATTT+TGG | + | chr3.3:50004221-50004240 | None:intergenic | 20.0% |
| !!! | TCATATTTTTCATAAAATGC+TGG | + | chr3.3:50005205-50005224 | None:intergenic | 20.0% |
| !!! | TTTGGTGAAAAATATTTTGA+AGG | - | chr3.3:50004976-50004995 | MS.gene08119:CDS | 20.0% |
| !!! | TTTGTTCTGAAATCTTATAA+TGG | + | chr3.3:50002937-50002956 | None:intergenic | 20.0% |
| !!! | TTTTCACCAAATTTATTTAG+AGG | + | chr3.3:50004967-50004986 | None:intergenic | 20.0% |
| ! | AAATATGTCATACACTTTCA+TGG | + | chr3.3:50002368-50002387 | None:intergenic | 25.0% |
| ! | AAATGGTTTCTCTATAGATT+AGG | + | chr3.3:50005155-50005174 | None:intergenic | 25.0% |
| ! | AAGTTAAATTCTGGATTCAA+TGG | - | chr3.3:50003163-50003182 | MS.gene08119:intron | 25.0% |
| ! | AATAATCATTTGTGTGTCAA+TGG | - | chr3.3:50001013-50001032 | MS.gene08119:intron | 25.0% |
| ! | AATGGTTTCTCTATAGATTA+GGG | + | chr3.3:50005154-50005173 | None:intergenic | 25.0% |
| ! | AATGTTTGATTCTTCTTTAC+AGG | + | chr3.3:50003005-50003024 | None:intergenic | 25.0% |
| ! | AGGATACAACAAAATTCAAT+AGG | + | chr3.3:50002961-50002980 | None:intergenic | 25.0% |
| ! | ATAGTTTGAAGGACTAATAT+AGG | - | chr3.3:50005065-50005084 | MS.gene08119:intron | 25.0% |
| ! | ATCAACCTTATAAGTGTATT+TGG | + | chr3.3:50003984-50004003 | None:intergenic | 25.0% |
| ! | ATGATACATTTACTTGGAAT+TGG | - | chr3.3:50000962-50000981 | MS.gene08119:intron | 25.0% |
| ! | ATGTTTGATTCTTCTTTACA+GGG | + | chr3.3:50003004-50003023 | None:intergenic | 25.0% |
| ! | ATTCAAATTTCCAATAGCAT+TGG | + | chr3.3:50001870-50001889 | None:intergenic | 25.0% |
| ! | CAATATATCACTGTGTAATT+GGG | + | chr3.3:50004151-50004170 | None:intergenic | 25.0% |
| ! | CAATCTAGAAAGAAAGAAAA+TGG | + | chr3.3:50003484-50003503 | None:intergenic | 25.0% |
| ! | CTTATTATAGGTACTTTAGA+TGG | - | chr3.3:50005740-50005759 | MS.gene08119:intron | 25.0% |
| ! | GATGATAATTATTTCAGCAA+TGG | - | chr3.3:50001759-50001778 | MS.gene08119:intron | 25.0% |
| ! | GTCACATAAAGAAGTAAAAA+AGG | + | chr3.3:50001472-50001491 | None:intergenic | 25.0% |
| ! | TAGTTTGAAGGACTAATATA+GGG | - | chr3.3:50005066-50005085 | MS.gene08119:intron | 25.0% |
| ! | TATTATGGTTAAAGTCAGTT+TGG | - | chr3.3:50006811-50006830 | MS.gene08119:intron | 25.0% |
| ! | TCAATATATCACTGTGTAAT+TGG | + | chr3.3:50004152-50004171 | None:intergenic | 25.0% |
| ! | TGATACATTTACTTGGAATT+GGG | - | chr3.3:50000963-50000982 | MS.gene08119:intron | 25.0% |
| ! | TGCTTTAGTTATAGCTATAA+TGG | - | chr3.3:50001095-50001114 | MS.gene08119:intron | 25.0% |
| ! | TGTTAGAATGTTTCAATAAC+AGG | + | chr3.3:50004392-50004411 | None:intergenic | 25.0% |
| ! | TTAACCACTTAGTGATTATT+TGG | + | chr3.3:50004284-50004303 | None:intergenic | 25.0% |
| ! | TTAACCATAATAAACAGCTA+GGG | + | chr3.3:50006803-50006822 | None:intergenic | 25.0% |
| ! | TTAGTAAAACTCTAGATGTA+TGG | - | chr3.3:50006890-50006909 | MS.gene08119:intron | 25.0% |
| ! | TTTAACCATAATAAACAGCT+AGG | + | chr3.3:50006804-50006823 | None:intergenic | 25.0% |
| ! | TTTAATATGAAACTGCTTCA+CGG | + | chr3.3:50003033-50003052 | None:intergenic | 25.0% |
| ! | TTTCTCCAAATACACTTATA+AGG | - | chr3.3:50003976-50003995 | MS.gene08119:intron | 25.0% |
| ! | TTTGCAGAAATATAGTTTGA+AGG | - | chr3.3:50005054-50005073 | MS.gene08119:intron | 25.0% |
| !! | AAAAAGTGTAATCCTTCAAA+TGG | + | chr3.3:50005172-50005191 | None:intergenic | 25.0% |
| !! | AACATGAAATTTGCTTTGAA+TGG | - | chr3.3:50005713-50005732 | MS.gene08119:intron | 25.0% |
| !! | AATCCAGAATTTAACTTACT+TGG | + | chr3.3:50003160-50003179 | None:intergenic | 25.0% |
| !! | ACATGAAATTTGCTTTGAAT+GGG | - | chr3.3:50005714-50005733 | MS.gene08119:intron | 25.0% |
| !! | CATCTAAAGTACCTATAATA+AGG | + | chr3.3:50005742-50005761 | None:intergenic | 25.0% |
| !! | CTGTTGTCAAAATTTTATAC+AGG | - | chr3.3:50006054-50006073 | MS.gene08119:intron | 25.0% |
| !! | GAAGTGATTTGGATTTATAA+AGG | + | chr3.3:50002065-50002084 | None:intergenic | 25.0% |
| !! | TGTCAATTTTGAACTTTTGA+GGG | + | chr3.3:50004906-50004925 | None:intergenic | 25.0% |
| !!! | AAAATAGTTTTACACTGCTT+TGG | - | chr3.3:50002543-50002562 | MS.gene08119:intron | 25.0% |
| !!! | AGCATCATATTTTAGCAATA+AGG | + | chr3.3:50003543-50003562 | None:intergenic | 25.0% |
| !!! | ATTGATTTTAACTTCCAATC+TGG | - | chr3.3:50006928-50006947 | MS.gene08119:intron | 25.0% |
| !!! | CCGATACAAAATTTTAAAAG+TGG | - | chr3.3:50006103-50006122 | MS.gene08119:intron | 25.0% |
| !!! | CTGTATAAAATTTTGACAAC+AGG | + | chr3.3:50006056-50006075 | None:intergenic | 25.0% |
| !!! | GTTTTATTTTGGAACTTTGT+TGG | + | chr3.3:50004210-50004229 | None:intergenic | 25.0% |
| !!! | GTTTTTTATGAAAACATACC+AGG | + | chr3.3:50001140-50001159 | None:intergenic | 25.0% |
| AAAAAGTAGACGAAGCATAT+CGG | - | chr3.3:50006738-50006757 | MS.gene08119:intron | 30.0% | |
| AAACAGATAATCGCAAAAGA+AGG | - | chr3.3:50002281-50002300 | MS.gene08119:CDS | 30.0% | |
| AAAGAAGTTTATTAGGAGTG+GGG | - | chr3.3:50006598-50006617 | MS.gene08119:intron | 30.0% | |
| AAATCAACTTCAACACTCTA+CGG | + | chr3.3:50006849-50006868 | None:intergenic | 30.0% | |
| AACACTTAATTTACCTGCTT+GGG | - | chr3.3:50002226-50002245 | MS.gene08119:intron | 30.0% | |
| AACTAAAAGGAGAAAATGTG+AGG | + | chr3.3:50006776-50006795 | None:intergenic | 30.0% | |
| AAGAGGCAAAGAAGTTTATT+AGG | - | chr3.3:50006591-50006610 | MS.gene08119:intron | 30.0% | |
| ACACAGTGATATATTGAAGT+CGG | - | chr3.3:50004155-50004174 | MS.gene08119:intron | 30.0% | |
| ACCATAGATATGAAGTGATT+TGG | + | chr3.3:50002076-50002095 | None:intergenic | 30.0% | |
| ACTAAAAGGAGAAAATGTGA+GGG | + | chr3.3:50006775-50006794 | None:intergenic | 30.0% | |
| ACTCCAAGTAAGTTAAATTC+TGG | - | chr3.3:50003154-50003173 | MS.gene08119:intron | 30.0% | |
| AGTGGTTAAAAACTGATAAG+TGG | - | chr3.3:50004295-50004314 | MS.gene08119:CDS | 30.0% | |
| AGTGTATTTGGAGAAATTAG+AGG | + | chr3.3:50003972-50003991 | None:intergenic | 30.0% | |
| ATCATACCAACAATTTGACT+TGG | - | chr3.3:50001410-50001429 | MS.gene08119:CDS | 30.0% | |
| ATTTACACTTACCTTCCATT+AGG | + | chr3.3:50002506-50002525 | None:intergenic | 30.0% | |
| CAAAGAAGTTTATTAGGAGT+GGG | - | chr3.3:50006597-50006616 | MS.gene08119:intron | 30.0% | |
| CAATACAAGTATACTAACCT+AGG | + | chr3.3:50001703-50001722 | None:intergenic | 30.0% | |
| CAGGATAGCTTATATGAATA+CGG | + | chr3.3:50001235-50001254 | None:intergenic | 30.0% | |
| CCTATATTGTTACAGTTACA+AGG | + | chr3.3:50005244-50005263 | None:intergenic | 30.0% | |
| CCTTGTAACTGTAACAATAT+AGG | - | chr3.3:50005241-50005260 | MS.gene08119:intron | 30.0% | |
| CTAGGTTAGTATACTTGTAT+TGG | - | chr3.3:50001701-50001720 | MS.gene08119:intron | 30.0% | |
| CTGCAAAGATTCATGTTAAA+AGG | + | chr3.3:50002138-50002157 | None:intergenic | 30.0% | |
| GAGTTTATTGAAGAGAAACA+AGG | + | chr3.3:50003714-50003733 | None:intergenic | 30.0% | |
| GATATGACAATTTGTGAACA+AGG | + | chr3.3:50005504-50005523 | None:intergenic | 30.0% | |
| GCAAACTTACTACTTATCAA+TGG | - | chr3.3:50001820-50001839 | MS.gene08119:intron | 30.0% | |
| GCAATATTATCCTATGTTCA+AGG | + | chr3.3:50004722-50004741 | None:intergenic | 30.0% | |
| GTGGTTAAAAACTGATAAGT+GGG | - | chr3.3:50004296-50004315 | MS.gene08119:CDS | 30.0% | |
| GTTATAGCTATAATGGTCAT+TGG | - | chr3.3:50001102-50001121 | MS.gene08119:intron | 30.0% | |
| GTTTACTTATGGATGAAGAA+GGG | - | chr3.3:50003377-50003396 | MS.gene08119:intron | 30.0% | |
| TAAGCCAAATAATCACTAAG+TGG | - | chr3.3:50004277-50004296 | MS.gene08119:CDS | 30.0% | |
| TATGATGCTATATCTTAACC+AGG | - | chr3.3:50003554-50003573 | MS.gene08119:CDS | 30.0% | |
| TCAACCATGAAAAAACTAGA+TGG | + | chr3.3:50004025-50004044 | None:intergenic | 30.0% | |
| TCCAAATCACTTCATATCTA+TGG | - | chr3.3:50002072-50002091 | MS.gene08119:intron | 30.0% | |
| TCTATAGAGAAACCATTTGA+AGG | - | chr3.3:50005157-50005176 | MS.gene08119:intron | 30.0% | |
| TCTTCAATAAACTCAGTGAA+AGG | - | chr3.3:50003720-50003739 | MS.gene08119:intron | 30.0% | |
| TGTGCCAAATTACAATGTAT+CGG | - | chr3.3:50005613-50005632 | MS.gene08119:CDS | 30.0% | |
| TGTTCACAAATTGTCATATC+TGG | - | chr3.3:50005504-50005523 | MS.gene08119:intron | 30.0% | |
| TTTACACTTACCTTCCATTA+GGG | + | chr3.3:50002505-50002524 | None:intergenic | 30.0% | |
| ! | AATAACCAAACAAGCTCTAA+GGG | - | chr3.3:50006177-50006196 | MS.gene08119:CDS | 30.0% |
| ! | CTTTTAACATGAATCTTTGC+AGG | - | chr3.3:50002136-50002155 | MS.gene08119:intron | 30.0% |
| ! | GAATGTCAAATAGAGTATCA+GGG | + | chr3.3:50004547-50004566 | None:intergenic | 30.0% |
| ! | GATAAGTAGTAAGTTTGCTT+GGG | + | chr3.3:50001818-50001837 | None:intergenic | 30.0% |
| ! | GTGAATTTTGAATCTTGTTC+AGG | - | chr3.3:50002833-50002852 | MS.gene08119:CDS | 30.0% |
| ! | GTGTCAATTTTGAACTTTTG+AGG | + | chr3.3:50004907-50004926 | None:intergenic | 30.0% |
| ! | TGAATGTCAAATAGAGTATC+AGG | + | chr3.3:50004548-50004567 | None:intergenic | 30.0% |
| ! | TGATAAGTAGTAAGTTTGCT+TGG | + | chr3.3:50001819-50001838 | None:intergenic | 30.0% |
| ! | TTGTGATTTGAAGTTCAAAC+CGG | - | chr3.3:50006556-50006575 | MS.gene08119:intron | 30.0% |
| ! | TTTCAACTTTCTGAAAGCAA+AGG | + | chr3.3:50005464-50005483 | None:intergenic | 30.0% |
| ! | TTTTGCTTCAGAAAAGTGAT+AGG | + | chr3.3:50007144-50007163 | None:intergenic | 30.0% |
| !! | AATGGACTAATTTGATGACA+GGG | + | chr3.3:50004829-50004848 | None:intergenic | 30.0% |
| !! | GTATACTTGTATTGGTTGTT+TGG | - | chr3.3:50001709-50001728 | MS.gene08119:intron | 30.0% |
| !! | TAATGGACTAATTTGATGAC+AGG | + | chr3.3:50004830-50004849 | None:intergenic | 30.0% |
| !! | TAGTTTGGAAATGATTTGCT+TGG | + | chr3.3:50007034-50007053 | None:intergenic | 30.0% |
| !!! | GGCAACTCTTCATTTTTTAA+TGG | + | chr3.3:50004847-50004866 | None:intergenic | 30.0% |
| !!! | GTTTTTTGGTATGTTTTGCA+TGG | - | chr3.3:50007218-50007237 | MS.gene08119:CDS | 30.0% |
| AACTTGAAAGGTGAAAAGTG+AGG | + | chr3.3:50000877-50000896 | None:intergenic | 35.0% | |
| AAGACATCAATAGGGTAAGA+TGG | + | chr3.3:50003945-50003964 | None:intergenic | 35.0% | |
| AAGTAATGATACCGACACAA+AGG | + | chr3.3:50004940-50004959 | None:intergenic | 35.0% | |
| AATGATAAGTAAAACCCGAC+TGG | - | chr3.3:50003793-50003812 | MS.gene08119:CDS | 35.0% | |
| AATTACAGGACATCATTTCC+CGG | - | chr3.3:50003248-50003267 | MS.gene08119:intron | 35.0% | |
| ACACTTAATTTACCTGCTTG+GGG | - | chr3.3:50002227-50002246 | MS.gene08119:intron | 35.0% | |
| ACATGAATCTTTGCAGGAAA+AGG | - | chr3.3:50002142-50002161 | MS.gene08119:intron | 35.0% | |
| ACATTCTAACATTTGATCCC+TGG | - | chr3.3:50004401-50004420 | MS.gene08119:intron | 35.0% | |
| ACTTCTAGTCAAATCCAGAT+TGG | + | chr3.3:50006945-50006964 | None:intergenic | 35.0% | |
| AGAGGATAGAAGACATCAAT+AGG | + | chr3.3:50003954-50003973 | None:intergenic | 35.0% | |
| AGAGGTGATAATCATGATTG+AGG | + | chr3.3:50002981-50003000 | None:intergenic | 35.0% | |
| AGTAATGATACCGACACAAA+GGG | + | chr3.3:50004939-50004958 | None:intergenic | 35.0% | |
| ATAAGTAAACGCATCAACTC+TGG | + | chr3.3:50003367-50003386 | None:intergenic | 35.0% | |
| ATGTTAGAAGCAATCTCATC+AGG | + | chr3.3:50000832-50000851 | None:intergenic | 35.0% | |
| ATTAGTGTAAGCAATTGTCC+TGG | + | chr3.3:50003575-50003594 | None:intergenic | 35.0% | |
| CAAAAATTGATCCATCTTCG+AGG | + | chr3.3:50004246-50004265 | None:intergenic | 35.0% | |
| CAACACTTAATTTACCTGCT+TGG | - | chr3.3:50002225-50002244 | MS.gene08119:intron | 35.0% | |
| CAACTTCAGTCACATTAACT+TGG | - | chr3.3:50001520-50001539 | MS.gene08119:CDS | 35.0% | |
| CAATAACCAAACAAGCTCTA+AGG | - | chr3.3:50006176-50006195 | MS.gene08119:CDS | 35.0% | |
| CAATCTCTCTTCTTTAGTAC+TGG | - | chr3.3:50001981-50002000 | MS.gene08119:intron | 35.0% | |
| CAGTAACCAAGTCAAATTGT+TGG | + | chr3.3:50001419-50001438 | None:intergenic | 35.0% | |
| CATGATCTTTGACAATGAAC+TGG | + | chr3.3:50002864-50002883 | None:intergenic | 35.0% | |
| CATGTTGGGCTATCTATTAT+AGG | - | chr3.3:50004113-50004132 | MS.gene08119:intron | 35.0% | |
| CGACTTACACAAATGCTAAA+CGG | - | chr3.3:50005330-50005349 | MS.gene08119:CDS | 35.0% | |
| CGTATTCATATAAGCTATCC+TGG | - | chr3.3:50001233-50001252 | MS.gene08119:intron | 35.0% | |
| CGTTTACTTATGGATGAAGA+AGG | - | chr3.3:50003376-50003395 | MS.gene08119:intron | 35.0% | |
| CTCAGTATGCTAAGGAAATT+TGG | - | chr3.3:50007323-50007342 | MS.gene08119:CDS | 35.0% | |
| CTTCCAATGAATCAAGCAAT+GGG | + | chr3.3:50006646-50006665 | None:intergenic | 35.0% | |
| GAGGATAGAAGACATCAATA+GGG | + | chr3.3:50003953-50003972 | None:intergenic | 35.0% | |
| GATTCATTGGAAGGAAATTC+TGG | - | chr3.3:50006653-50006672 | MS.gene08119:intron | 35.0% | |
| GCAAAGAAGTTTATTAGGAG+TGG | - | chr3.3:50006596-50006615 | MS.gene08119:intron | 35.0% | |
| GGATATTGAGAGAGATAATG+TGG | + | chr3.3:50004808-50004827 | None:intergenic | 35.0% | |
| GGCTATCTATTATAGGTGAA+TGG | - | chr3.3:50004120-50004139 | MS.gene08119:intron | 35.0% | |
| GTGATAGAGAGAAGATGTAA+GGG | + | chr3.3:50006393-50006412 | None:intergenic | 35.0% | |
| TACTTTAGATGGAGCTAATG+TGG | - | chr3.3:50005751-50005770 | MS.gene08119:intron | 35.0% | |
| TAGGACTTAAATCAAATGCG+AGG | + | chr3.3:50001684-50001703 | None:intergenic | 35.0% | |
| TATCATTGTAGTGAACTGCA+TGG | + | chr3.3:50003780-50003799 | None:intergenic | 35.0% | |
| TATTGTAAACAGTGATCCTG+TGG | - | chr3.3:50005382-50005401 | MS.gene08119:CDS | 35.0% | |
| TCACAAATTGTCATATCTGG+TGG | - | chr3.3:50005507-50005526 | MS.gene08119:intron | 35.0% | |
| TCTGTTTAAATAGTCCGTAC+CGG | + | chr3.3:50002268-50002287 | None:intergenic | 35.0% | |
| TGTGATAGAGAGAAGATGTA+AGG | + | chr3.3:50006394-50006413 | None:intergenic | 35.0% | |
| TGTTCAAGCTCAAACTTGAA+AGG | + | chr3.3:50000889-50000908 | None:intergenic | 35.0% | |
| TTATCAATGGAGTTCCTTCA+AGG | - | chr3.3:50001833-50001852 | MS.gene08119:intron | 35.0% | |
| TTCTCCCTAGCTGTTTATTA+TGG | - | chr3.3:50006796-50006815 | MS.gene08119:intron | 35.0% | |
| TTGTACCCTATCAGATTCTT+TGG | - | chr3.3:50002464-50002483 | MS.gene08119:CDS | 35.0% | |
| ! | AAATCTTTGAGAGGCTAACT+TGG | - | chr3.3:50005095-50005114 | MS.gene08119:intron | 35.0% |
| ! | AAATTACAATGTATCGGTGG+CGG | - | chr3.3:50005619-50005638 | MS.gene08119:CDS | 35.0% |
| ! | AGGTAAATTAAGTGTTGCCA+TGG | + | chr3.3:50002222-50002241 | None:intergenic | 35.0% |
| ! | AGTGATAGGTGATGTTACTT+TGG | + | chr3.3:50007130-50007149 | None:intergenic | 35.0% |
| ! | ATGTCTATCTTAAGTACTGC+TGG | - | chr3.3:50007268-50007287 | MS.gene08119:CDS | 35.0% |
| ! | GCAACTTTTTATTACCTGCT+CGG | + | chr3.3:50001951-50001970 | None:intergenic | 35.0% |
| ! | TCGCATTTGATTTAAGTCCT+AGG | - | chr3.3:50001683-50001702 | MS.gene08119:intron | 35.0% |
| ! | TCTAAAGTAGAGACTAATGG+TGG | - | chr3.3:50000754-50000773 | MS.gene08119:CDS | 35.0% |
| ! | TGTCTATCTTAAGTACTGCT+GGG | - | chr3.3:50007269-50007288 | MS.gene08119:CDS | 35.0% |
| ! | TTGAATGGGTGCCTTATTAT+AGG | - | chr3.3:50005728-50005747 | MS.gene08119:intron | 35.0% |
| ! | TTGGAAGGAAATTCTGGTTA+TGG | - | chr3.3:50006659-50006678 | MS.gene08119:intron | 35.0% |
| ! | TTGTACTTTTCCGTTCTTCA+GGG | + | chr3.3:50005274-50005293 | None:intergenic | 35.0% |
| ! | TTTTACACTGCTTTGGTACA+TGG | - | chr3.3:50002550-50002569 | MS.gene08119:intron | 35.0% |
| !! | AGAGTTGATGCGTTTACTTA+TGG | - | chr3.3:50003366-50003385 | MS.gene08119:intron | 35.0% |
| !! | AGCTTGTTCAAACCTTTTTC+AGG | - | chr3.3:50005583-50005602 | MS.gene08119:intron | 35.0% |
| !! | ATTTCCAATAGCATTGGTCA+AGG | + | chr3.3:50001864-50001883 | None:intergenic | 35.0% |
| !! | ATTTGTTCGGTTTTGTATCC+TGG | - | chr3.3:50003068-50003087 | MS.gene08119:intron | 35.0% |
| !! | CATCAACTCTGGTATTGATA+GGG | + | chr3.3:50003356-50003375 | None:intergenic | 35.0% |
| !! | CTTGTATTGGTTGTTTGGAT+AGG | - | chr3.3:50001714-50001733 | MS.gene08119:intron | 35.0% |
| !! | GAACTTTTGAGGGACTAATT+TGG | + | chr3.3:50004896-50004915 | None:intergenic | 35.0% |
| !! | GGTTCTAAAGTAGAGACTAA+TGG | - | chr3.3:50000751-50000770 | MS.gene08119:CDS | 35.0% |
| !! | GTAATCGTGTTTTTATACGC+TGG | + | chr3.3:50002111-50002130 | None:intergenic | 35.0% |
| !! | TTTGTTCGGTTTTGTATCCT+GGG | - | chr3.3:50003069-50003088 | MS.gene08119:intron | 35.0% |
| !!! | CAAGTTGCGATTCGTTTTTT+AGG | - | chr3.3:50001550-50001569 | MS.gene08119:intron | 35.0% |
| !!! | GACACCATCTAGTTTTTTCA+TGG | - | chr3.3:50004018-50004037 | MS.gene08119:intron | 35.0% |
| !!! | GAGGAGAATTTTTTCCTCTT+TGG | - | chr3.3:50005794-50005813 | MS.gene08119:CDS | 35.0% |
| AAATTCTGGATTCAATGGCG+TGG | - | chr3.3:50003168-50003187 | MS.gene08119:intron | 40.0% | |
| AAATTTGCCATCCGAACAAC+TGG | + | chr3.3:50003872-50003891 | None:intergenic | 40.0% | |
| AACTGTACTCTATCATGCAG+TGG | + | chr3.3:50004661-50004680 | None:intergenic | 40.0% | |
| AACTTGATCCTACAGCTTTC+TGG | + | chr3.3:50001344-50001363 | None:intergenic | 40.0% | |
| AATGGTCTCAGTCTGTAATG+TGG | - | chr3.3:50003623-50003642 | MS.gene08119:CDS | 40.0% | |
| AATTGTACAGCAACCTTCGT+CGG | + | chr3.3:50003316-50003335 | None:intergenic | 40.0% | |
| ACCTGTCAGTAAGTCAAGAT+CGG | + | chr3.3:50004325-50004344 | None:intergenic | 40.0% | |
| ACTGTACTCTATCATGCAGT+GGG | + | chr3.3:50004660-50004679 | None:intergenic | 40.0% | |
| ACTTGAAGAAATAACCGAGC+AGG | - | chr3.3:50001934-50001953 | MS.gene08119:intron | 40.0% | |
| AGAAGATGTAAGGGAAGCTA+GGG | + | chr3.3:50006384-50006403 | None:intergenic | 40.0% | |
| AGTGAGGACTATATTGAGCA+TGG | + | chr3.3:50000861-50000880 | None:intergenic | 40.0% | |
| ATCCTGAAGTTCAAGGAACT+AGG | + | chr3.3:50006001-50006020 | None:intergenic | 40.0% | |
| ATGGAGCTAATGTGGAAATC+AGG | - | chr3.3:50005759-50005778 | MS.gene08119:intron | 40.0% | |
| ATTGTCCAAAATGCGCATGT+TGG | + | chr3.3:50003837-50003856 | None:intergenic | 40.0% | |
| CAAACAGAAGTTTAGCCCTT+GGG | - | chr3.3:50002421-50002440 | MS.gene08119:CDS | 40.0% | |
| CAAACAGATCCTGAAGTTCA+AGG | + | chr3.3:50006008-50006027 | None:intergenic | 40.0% | |
| CAAATTGTCATATCTGGTGG+TGG | - | chr3.3:50005510-50005529 | MS.gene08119:intron | 40.0% | |
| CAACCCATTGCTTGATTCAT+TGG | - | chr3.3:50006640-50006659 | MS.gene08119:intron | 40.0% | |
| CACTTAATTTACCTGCTTGG+GGG | - | chr3.3:50002228-50002247 | MS.gene08119:intron | 40.0% | |
| CAGAAGGTGGAAAACTTCTA+CGG | - | chr3.3:50003099-50003118 | MS.gene08119:intron | 40.0% | |
| CAGCTAGGGAGAAAACTAAA+AGG | + | chr3.3:50006789-50006808 | None:intergenic | 40.0% | |
| CCAAATTCATCCCTTTGTGT+CGG | - | chr3.3:50004926-50004945 | MS.gene08119:intron | 40.0% | |
| CCATTGCTTGATTCATTGGA+AGG | - | chr3.3:50006644-50006663 | MS.gene08119:intron | 40.0% | |
| CCTTCCAATGAATCAAGCAA+TGG | + | chr3.3:50006647-50006666 | None:intergenic | 40.0% | |
| CGTGGTGATTACTTTCTTGT+TGG | - | chr3.3:50006683-50006702 | MS.gene08119:intron | 40.0% | |
| CTTATTTCCATAAGCTCTCC+AGG | + | chr3.3:50001254-50001273 | None:intergenic | 40.0% | |
| CTTGAACTTCAGGATCTGTT+TGG | - | chr3.3:50006006-50006025 | MS.gene08119:intron | 40.0% | |
| GAAGCTTTCATTATGAGCGA+TGG | + | chr3.3:50002043-50002062 | None:intergenic | 40.0% | |
| GACAATTGCTCAGTATGCTA+AGG | - | chr3.3:50007315-50007334 | MS.gene08119:CDS | 40.0% | |
| GATAATCGCAAAAGAAGGTC+AGG | - | chr3.3:50002286-50002305 | MS.gene08119:CDS | 40.0% | |
| GATGTCCTGTAATTGGTTGA+AGG | + | chr3.3:50003242-50003261 | None:intergenic | 40.0% | |
| GCACAAACACAACCTGAAAA+AGG | + | chr3.3:50005598-50005617 | None:intergenic | 40.0% | |
| GCCAAATTACAATGTATCGG+TGG | - | chr3.3:50005616-50005635 | MS.gene08119:CDS | 40.0% | |
| GCCACCGATACATTGTAATT+TGG | + | chr3.3:50005620-50005639 | None:intergenic | 40.0% | |
| GGCAACACTCAAATCTTTGA+AGG | + | chr3.3:50004787-50004806 | None:intergenic | 40.0% | |
| GGGAAATGATGTCCTGTAAT+TGG | + | chr3.3:50003249-50003268 | None:intergenic | 40.0% | |
| GGGACACTTAAATCTTTGAG+AGG | - | chr3.3:50005086-50005105 | MS.gene08119:intron | 40.0% | |
| TCTATGATTTCCATGTGACG+AGG | + | chr3.3:50003658-50003677 | None:intergenic | 40.0% | |
| TCTCACCTTCAACCAATTAC+AGG | - | chr3.3:50003234-50003253 | MS.gene08119:intron | 40.0% | |
| TGATTCTTCTTTACAGGGAG+AGG | + | chr3.3:50002999-50003018 | None:intergenic | 40.0% | |
| TGGAGCTAATGTGGAAATCA+GGG | - | chr3.3:50005760-50005779 | MS.gene08119:intron | 40.0% | |
| TGTGGTCAATAGCTACTTGA+AGG | - | chr3.3:50005400-50005419 | MS.gene08119:CDS | 40.0% | |
| TTCAAGTAGCTATTGACCAC+AGG | + | chr3.3:50005401-50005420 | None:intergenic | 40.0% | |
| TTCATTGTCAGCAAACTGCA+GGG | + | chr3.3:50004435-50004454 | None:intergenic | 40.0% | |
| TTCTTGCTTTCTGGATTCCA+TGG | - | chr3.3:50002202-50002221 | MS.gene08119:intron | 40.0% | |
| TTCTTTGCCTCTTCAAATCG+AGG | + | chr3.3:50006584-50006603 | None:intergenic | 40.0% | |
| TTTGTACGACAGAAAGCTGT+AGG | - | chr3.3:50001383-50001402 | MS.gene08119:CDS | 40.0% | |
| ! | ACTTTCCAACATGCGCATTT+TGG | - | chr3.3:50003829-50003848 | MS.gene08119:CDS | 40.0% |
| ! | ATAGCTCTGTCCTTGAACAT+AGG | - | chr3.3:50004709-50004728 | MS.gene08119:CDS | 40.0% |
| ! | GTGATTATTTGGCTTAGCTC+AGG | + | chr3.3:50004273-50004292 | None:intergenic | 40.0% |
| ! | GTTGTACTTTTCCGTTCTTC+AGG | + | chr3.3:50005275-50005294 | None:intergenic | 40.0% |
| ! | TAGAAGTTTTCCACCTTCTG+TGG | + | chr3.3:50003099-50003118 | None:intergenic | 40.0% |
| ! | TTTATTAGGAGTGGGGTGTT+TGG | - | chr3.3:50006605-50006624 | MS.gene08119:intron | 40.0% |
| !! | AACTCTGGTATTGATAGGGT+CGG | + | chr3.3:50003352-50003371 | None:intergenic | 40.0% |
| !! | GCATCAACTCTGGTATTGAT+AGG | + | chr3.3:50003357-50003376 | None:intergenic | 40.0% |
| !! | TAGAAGTGCACTTTTGCTGT+AGG | - | chr3.3:50001049-50001068 | MS.gene08119:intron | 40.0% |
| !! | TCATCAGGTTTTTCAGCTAG+TGG | + | chr3.3:50000817-50000836 | None:intergenic | 40.0% |
| !! | TTGGTTTGGTATCCAGGAAT+TGG | + | chr3.3:50002685-50002704 | None:intergenic | 40.0% |
| !! | TTGTTCGGTTTTGTATCCTG+GGG | - | chr3.3:50003070-50003089 | MS.gene08119:intron | 40.0% |
| !!! | CATTGGTGATGTTTTTGACC+TGG | - | chr3.3:50001119-50001138 | MS.gene08119:intron | 40.0% |
| AACTGCAGGGAAAAAACACC+AGG | + | chr3.3:50004422-50004441 | None:intergenic | 45.0% | |
| AAGCTATCCTGGAGAGCTTA+TGG | - | chr3.3:50001244-50001263 | MS.gene08119:intron | 45.0% | |
| AAGGATGCAGCACTAGGAAA+TGG | - | chr3.3:50002161-50002180 | MS.gene08119:intron | 45.0% | |
| AATCGCAAAAGAAGGTCAGG+AGG | - | chr3.3:50002289-50002308 | MS.gene08119:CDS | 45.0% | |
| AATTTACCTGCTTGGGGGTA+TGG | - | chr3.3:50002233-50002252 | MS.gene08119:intron | 45.0% | |
| ACATATTAGTACCGCAGGCA+TGG | - | chr3.3:50005673-50005692 | MS.gene08119:CDS | 45.0% | |
| ACCGATCTTGACTTACTGAC+AGG | - | chr3.3:50004321-50004340 | MS.gene08119:intron | 45.0% | |
| ACCTGGCCAAAGAATCTGAT+AGG | + | chr3.3:50002473-50002492 | None:intergenic | 45.0% | |
| ACTGCAGGGAAAAAACACCA+GGG | + | chr3.3:50004421-50004440 | None:intergenic | 45.0% | |
| AGACAGTTTGGGAGAGCTTA+TGG | + | chr3.3:50001311-50001330 | None:intergenic | 45.0% | |
| AGACCATTTCTCCAGTGCTT+CGG | + | chr3.3:50003611-50003630 | None:intergenic | 45.0% | |
| ATGAAGATCTGCAAGCAGAG+TGG | - | chr3.3:50004450-50004469 | MS.gene08119:CDS | 45.0% | |
| ATGGCATTACACCTCGAAGA+TGG | - | chr3.3:50004232-50004251 | MS.gene08119:CDS | 45.0% | |
| CACCTAGTTCCTTGAACTTC+AGG | - | chr3.3:50005996-50006015 | MS.gene08119:intron | 45.0% | |
| CACTGTCATGATTGGAGGAA+AGG | - | chr3.3:50005301-50005320 | MS.gene08119:CDS | 45.0% | |
| CATGGTGCAGTGACAAGAAA+AGG | - | chr3.3:50007236-50007255 | MS.gene08119:CDS | 45.0% | |
| CCAAACAGAAGTTTAGCCCT+TGG | - | chr3.3:50002420-50002439 | MS.gene08119:CDS | 45.0% | |
| CCAAGGGCTAAACTTCTGTT+TGG | + | chr3.3:50002423-50002442 | None:intergenic | 45.0% | |
| CCGACACAAAGGGATGAATT+TGG | + | chr3.3:50004929-50004948 | None:intergenic | 45.0% | |
| CCTGGCCAAAGAATCTGATA+GGG | + | chr3.3:50002472-50002491 | None:intergenic | 45.0% | |
| CTTATGGATGAAGAAGGGCT+TGG | - | chr3.3:50003382-50003401 | MS.gene08119:intron | 45.0% | |
| CTTCATTGTCAGCAAACTGC+AGG | + | chr3.3:50004436-50004455 | None:intergenic | 45.0% | |
| GAAATTGCTTCCTCGTCACA+TGG | - | chr3.3:50003645-50003664 | MS.gene08119:CDS | 45.0% | |
| GAGAAGATGTAAGGGAAGCT+AGG | + | chr3.3:50006385-50006404 | None:intergenic | 45.0% | |
| GCCTGCGGTACTAATATGTT+GGG | + | chr3.3:50005672-50005691 | None:intergenic | 45.0% | |
| GCGTACTTGTGAGACAGTTT+GGG | + | chr3.3:50001322-50001341 | None:intergenic | 45.0% | |
| GCTTATGATGTGCCAATTCC+TGG | - | chr3.3:50002670-50002689 | MS.gene08119:intron | 45.0% | |
| GTCAAGCTGGTCAATGATGT+TGG | - | chr3.3:50005356-50005375 | MS.gene08119:CDS | 45.0% | |
| GTGGAAATCAGGGAAGAGAT+CGG | - | chr3.3:50005770-50005789 | MS.gene08119:intron | 45.0% | |
| GTTCACTCTCAAGATCCAGT+CGG | + | chr3.3:50003811-50003830 | None:intergenic | 45.0% | |
| TATGCCAGCCGAAAATGGAT+TGG | - | chr3.3:50002625-50002644 | MS.gene08119:intron | 45.0% | |
| TCCCAACATATTAGTACCGC+AGG | - | chr3.3:50005668-50005687 | MS.gene08119:CDS | 45.0% | |
| TCGAGGTTAACCCTAATGGA+AGG | - | chr3.3:50002492-50002511 | MS.gene08119:CDS | 45.0% | |
| TCGGATGGCAAATTTGTGTG+TGG | - | chr3.3:50003877-50003896 | MS.gene08119:CDS | 45.0% | |
| TGCCTGCGGTACTAATATGT+TGG | + | chr3.3:50005673-50005692 | None:intergenic | 45.0% | |
| TGCTAAACGGATAGTCAAGC+TGG | - | chr3.3:50005343-50005362 | MS.gene08119:CDS | 45.0% | |
| TTAGCCCTTGGGAAATTGTG+AGG | - | chr3.3:50002432-50002451 | MS.gene08119:CDS | 45.0% | |
| TTATGACTTCCCAAGCTACG+TGG | - | chr3.3:50006706-50006725 | MS.gene08119:intron | 45.0% | |
| TTCACTCTCAAGATCCAGTC+GGG | + | chr3.3:50003810-50003829 | None:intergenic | 45.0% | |
| TTCTGCTAAAGTTCCAGCTG+TGG | - | chr3.3:50000786-50000805 | MS.gene08119:CDS | 45.0% | |
| ! | ACTGACCCTTAGAGCTTGTT+TGG | + | chr3.3:50006185-50006204 | None:intergenic | 45.0% |
| ! | ATCTTAAGTACTGCTGGGAG+TGG | - | chr3.3:50007274-50007293 | MS.gene08119:CDS | 45.0% |
| ! | CTTCTCCGCCAATCCATTTT+CGG | + | chr3.3:50002636-50002655 | None:intergenic | 45.0% |
| ! | GACTGATGGTGTTCTTGGTT+TGG | + | chr3.3:50002699-50002718 | None:intergenic | 45.0% |
| ! | GGAAATTCTGGTTATGGTCG+TGG | - | chr3.3:50006665-50006684 | MS.gene08119:intron | 45.0% |
| ! | TAGGAAATGGTGGTCTTGGT+CGG | - | chr3.3:50002174-50002193 | MS.gene08119:intron | 45.0% |
| ! | TCTTAAGTACTGCTGGGAGT+GGG | - | chr3.3:50007275-50007294 | MS.gene08119:CDS | 45.0% |
| !! | ACTCTGGTATTGATAGGGTC+GGG | + | chr3.3:50003351-50003370 | None:intergenic | 45.0% |
| !! | AGTACGTTCTGAAGGTGACA+GGG | - | chr3.3:50004510-50004529 | MS.gene08119:CDS | 45.0% |
| !! | GTGTTCTTGGTTTGGTATCC+AGG | + | chr3.3:50002691-50002710 | None:intergenic | 45.0% |
| !! | GTTGCATGTAGAGAAGCATC+CGG | + | chr3.3:50004364-50004383 | None:intergenic | 45.0% |
| !! | TATGGTTTGAGGTACCGGTA+CGG | - | chr3.3:50002251-50002270 | MS.gene08119:intron | 45.0% |
| !!! | TTTTTAATTAAAAAGTATTA+TGG | + | chr3.3:50006139-50006158 | None:intergenic | 5.0% |
| AATCAGGGAAGAGATCGGTG+AGG | - | chr3.3:50005775-50005794 | MS.gene08119:intron | 50.0% | |
| ACCATTTCTCCAGTGCTTCG+GGG | + | chr3.3:50003609-50003628 | None:intergenic | 50.0% | |
| ACTGCACGCACTGTCATGAT+TGG | - | chr3.3:50005293-50005312 | MS.gene08119:intron | 50.0% | |
| AGAGTGGTCGTCTGCAAAGA+TGG | - | chr3.3:50004466-50004485 | MS.gene08119:CDS | 50.0% | |
| AGCAACCTTCGTCGGAAACT+CGG | + | chr3.3:50003308-50003327 | None:intergenic | 50.0% | |
| AGCGTATCCACGAGTACAAG+AGG | - | chr3.3:50004573-50004592 | MS.gene08119:intron | 50.0% | |
| AGGAGATGAGCCCTGAAGAA+CGG | - | chr3.3:50005261-50005280 | MS.gene08119:intron | 50.0% | |
| ATCCCCAGAAGCCAGTTGTT+CGG | - | chr3.3:50003858-50003877 | MS.gene08119:CDS | 50.0% | |
| CAAGTACGCCAGAAAGCTGT+AGG | - | chr3.3:50001333-50001352 | MS.gene08119:intron | 50.0% | |
| CAGGAAAAGGATGCAGCACT+AGG | - | chr3.3:50002155-50002174 | MS.gene08119:intron | 50.0% | |
| CAGGTCGAGGTTAACCCTAA+TGG | - | chr3.3:50002488-50002507 | MS.gene08119:CDS | 50.0% | |
| CATTAGGGTTAACCTCGACC+TGG | + | chr3.3:50002490-50002509 | None:intergenic | 50.0% | |
| CCCTATCAGATTCTTTGGCC+AGG | - | chr3.3:50002469-50002488 | MS.gene08119:CDS | 50.0% | |
| CGAGCCTTGACCAATGCTAT+TGG | - | chr3.3:50001857-50001876 | MS.gene08119:intron | 50.0% | |
| CGTGCCTCACAATTTCCCAA+GGG | + | chr3.3:50002439-50002458 | None:intergenic | 50.0% | |
| CTGAGGAAGGAAAGAGAGGA+TGG | - | chr3.3:50005842-50005861 | MS.gene08119:CDS | 50.0% | |
| CTTACTGACAGGTCTTCGAG+AGG | - | chr3.3:50004332-50004351 | MS.gene08119:intron | 50.0% | |
| CTTGGCACAGTACGTTCTGA+AGG | - | chr3.3:50004502-50004521 | MS.gene08119:CDS | 50.0% | |
| GAAGGAAAGAGAGGATGGAC+TGG | - | chr3.3:50005847-50005866 | MS.gene08119:CDS | 50.0% | |
| GACCATTTCTCCAGTGCTTC+GGG | + | chr3.3:50003610-50003629 | None:intergenic | 50.0% | |
| GATGCAGCACTAGGAAATGG+TGG | - | chr3.3:50002164-50002183 | MS.gene08119:intron | 50.0% | |
| GATGGCTAATAAGCAGCGCT+TGG | - | chr3.3:50004484-50004503 | MS.gene08119:CDS | 50.0% | |
| GCACTAGGAAATGGTGGTCT+TGG | - | chr3.3:50002170-50002189 | MS.gene08119:intron | 50.0% | |
| GCCTCTTCAAATCGAGGATC+CGG | + | chr3.3:50006578-50006597 | None:intergenic | 50.0% | |
| GCTGATGCTTTGCGCAAGTT+CGG | - | chr3.3:50001905-50001924 | MS.gene08119:intron | 50.0% | |
| GCTTGGATGGGATGAAGCAT+GGG | - | chr3.3:50003399-50003418 | MS.gene08119:intron | 50.0% | |
| GGACATCATTTCCCGGTTCA+AGG | - | chr3.3:50003255-50003274 | MS.gene08119:intron | 50.0% | |
| GGATGAAGAAGGGCTTGGAT+GGG | - | chr3.3:50003387-50003406 | MS.gene08119:intron | 50.0% | |
| GGCGTACTTGTGAGACAGTT+TGG | + | chr3.3:50001323-50001342 | None:intergenic | 50.0% | |
| GGTGCAGTGACAAGAAAAGG+TGG | - | chr3.3:50007239-50007258 | MS.gene08119:CDS | 50.0% | |
| GTGTGTATGCCAGCCGAAAA+TGG | - | chr3.3:50002620-50002639 | MS.gene08119:intron | 50.0% | |
| GTTGGGATAGCTCACTTCCT+GGG | + | chr3.3:50005655-50005674 | None:intergenic | 50.0% | |
| TCATTTCCCGGTTCAAGGAG+AGG | - | chr3.3:50003260-50003279 | MS.gene08119:intron | 50.0% | |
| TCGACTGAGGAAGGAAAGAG+AGG | - | chr3.3:50005838-50005857 | MS.gene08119:CDS | 50.0% | |
| TCGTGCCTCACAATTTCCCA+AGG | + | chr3.3:50002440-50002459 | None:intergenic | 50.0% | |
| TCTCTTTCCTTCCTCAGTCG+AGG | + | chr3.3:50005839-50005858 | None:intergenic | 50.0% | |
| TGATGTACCTCGACTGAGGA+AGG | - | chr3.3:50005829-50005848 | MS.gene08119:CDS | 50.0% | |
| TGGATGAAGAAGGGCTTGGA+TGG | - | chr3.3:50003386-50003405 | MS.gene08119:intron | 50.0% | |
| TGTTCGTGATCGTCTCGTTC+AGG | - | chr3.3:50000933-50000952 | MS.gene08119:intron | 50.0% | |
| TGTTGGGATAGCTCACTTCC+TGG | + | chr3.3:50005656-50005675 | None:intergenic | 50.0% | |
| ! | ACCGGATCCTCGATTTGAAG+AGG | - | chr3.3:50006574-50006593 | MS.gene08119:intron | 50.0% |
| ! | ATCCGAACAACTGGCTTCTG+GGG | + | chr3.3:50003863-50003882 | None:intergenic | 50.0% |
| ! | CACAAGCTTTAGCTTCCCAG+AGG | + | chr3.3:50002726-50002745 | None:intergenic | 50.0% |
| ! | CATCCGAACAACTGGCTTCT+GGG | + | chr3.3:50003864-50003883 | None:intergenic | 50.0% |
| ! | GCGAAGACTGATGGTGTTCT+TGG | + | chr3.3:50002704-50002723 | None:intergenic | 50.0% |
| ! | TCGGCTTGCTTCTTGCTTTC+TGG | - | chr3.3:50002193-50002212 | MS.gene08119:intron | 50.0% |
| ! | TTACAATGTATCGGTGGCGG+AGG | - | chr3.3:50005622-50005641 | MS.gene08119:CDS | 50.0% |
| ! | TTTCCTCTTTGGTGCGACAG+CGG | - | chr3.3:50005805-50005824 | MS.gene08119:CDS | 50.0% |
| !! | CAGTACGTTCTGAAGGTGAC+AGG | - | chr3.3:50004509-50004528 | MS.gene08119:CDS | 50.0% |
| !! | GCAGAACTTGTTGCGTTGTG+TGG | - | chr3.3:50003446-50003465 | MS.gene08119:intron | 50.0% |
| !! | GTACGTTCTGAAGGTGACAG+GGG | - | chr3.3:50004511-50004530 | MS.gene08119:CDS | 50.0% |
| !! | TGGTATTGATAGGGTCGGGT+GGG | + | chr3.3:50003347-50003366 | None:intergenic | 50.0% |
| ACACCATCAGTCTTCGCCTC+TGG | - | chr3.3:50002707-50002726 | MS.gene08119:CDS | 55.0% | |
| AGGAGGAAGTTGCTGAGGAC+TGG | - | chr3.3:50002306-50002325 | MS.gene08119:CDS | 55.0% | |
| AGGTCAGGAGGAAGTTGCTG+AGG | - | chr3.3:50002301-50002320 | MS.gene08119:CDS | 55.0% | |
| ATTTCTCCAGTGCTTCGGGG+AGG | + | chr3.3:50003606-50003625 | None:intergenic | 55.0% | |
| CACCATCAGTCTTCGCCTCT+GGG | - | chr3.3:50002708-50002727 | MS.gene08119:CDS | 55.0% | |
| CAGATTCTTTGGCCAGGTCG+AGG | - | chr3.3:50002475-50002494 | MS.gene08119:CDS | 55.0% | |
| CCAGAAGCCAGTTGTTCGGA+TGG | - | chr3.3:50003862-50003881 | MS.gene08119:CDS | 55.0% | |
| CCTGAGCATCCACGTAGCTT+GGG | + | chr3.3:50006718-50006737 | None:intergenic | 55.0% | |
| CGGATGATGTACCTCGACTG+AGG | - | chr3.3:50005825-50005844 | MS.gene08119:CDS | 55.0% | |
| CTCAAACCATACCCCCAAGC+AGG | + | chr3.3:50002242-50002261 | None:intergenic | 55.0% | |
| GCACGCACTGTCATGATTGG+AGG | - | chr3.3:50005296-50005315 | MS.gene08119:intron | 55.0% | |
| GCTTCACTCACGAGCTCAAC+AGG | - | chr3.3:50002801-50002820 | MS.gene08119:CDS | 55.0% | |
| GGAAACTCGGACCAGTTCCA+AGG | + | chr3.3:50003295-50003314 | None:intergenic | 55.0% | |
| GGCTTGGATGGGATGAAGCA+TGG | - | chr3.3:50003398-50003417 | MS.gene08119:intron | 55.0% | |
| GGTCTTCGAGAGGTGAGTAC+CGG | - | chr3.3:50004342-50004361 | MS.gene08119:intron | 55.0% | |
| GTAGCTGCCTCTTGTACTCG+TGG | + | chr3.3:50004583-50004602 | None:intergenic | 55.0% | |
| GTGGGAAGTTCAGCAGTGAC+AGG | - | chr3.3:50007293-50007312 | MS.gene08119:CDS | 55.0% | |
| TATCCTGGGGATGCCACAGA+AGG | - | chr3.3:50003083-50003102 | MS.gene08119:intron | 55.0% | |
| TCCTGAGCATCCACGTAGCT+TGG | + | chr3.3:50006719-50006738 | None:intergenic | 55.0% | |
| TGGATGGGATGAAGCATGGG+AGG | - | chr3.3:50003402-50003421 | MS.gene08119:intron | 55.0% | |
| TGGTCAAGGCTCGACCTTGA+AGG | + | chr3.3:50001850-50001869 | None:intergenic | 55.0% | |
| TTCCCAGAGGCGAAGACTGA+TGG | + | chr3.3:50002713-50002732 | None:intergenic | 55.0% | |
| TTTCCCGGTTCAAGGAGAGG+AGG | - | chr3.3:50003263-50003282 | MS.gene08119:intron | 55.0% | |
| ! | CCATCCGAACAACTGGCTTC+TGG | + | chr3.3:50003865-50003884 | None:intergenic | 55.0% |
| ! | CTGCTTGGGGGTATGGTTTG+AGG | - | chr3.3:50002240-50002259 | MS.gene08119:intron | 55.0% |
| ! | GGGGGTATGGTTTGAGGTAC+CGG | - | chr3.3:50002246-50002265 | MS.gene08119:intron | 55.0% |
| ! | TCCGCCAATCCATTTTCGGC+TGG | + | chr3.3:50002632-50002651 | None:intergenic | 55.0% |
| !! | CTGGTATTGATAGGGTCGGG+TGG | + | chr3.3:50003348-50003367 | None:intergenic | 55.0% |
| !! | GCCAGCCGAAAATGGATTGG+CGG | - | chr3.3:50002628-50002647 | MS.gene08119:intron | 55.0% |
| !! | GCTAGTGGATTTGCCACAGC+TGG | + | chr3.3:50000802-50000821 | None:intergenic | 55.0% |
| !! | TCCCCGAAGCACTGGAGAAA+TGG | - | chr3.3:50003605-50003624 | MS.gene08119:CDS | 55.0% |
| ACCGCAGGCATGGAAGCAAG+TGG | - | chr3.3:50005683-50005702 | MS.gene08119:intron | 60.0% | |
| CATCCGCTGTCGCACCAAAG+AGG | + | chr3.3:50005811-50005830 | None:intergenic | 60.0% | |
| CCCAAGCTACGTGGATGCTC+AGG | - | chr3.3:50006715-50006734 | MS.gene08119:intron | 60.0% | |
| CCTGCCTCCTCTCCTTGAAC+CGG | + | chr3.3:50003270-50003289 | None:intergenic | 60.0% | |
| CGGTTCAAGGAGAGGAGGCA+GGG | - | chr3.3:50003268-50003287 | MS.gene08119:intron | 60.0% | |
| CTGCCTCCTCTCCTTGAACC+GGG | + | chr3.3:50003269-50003288 | None:intergenic | 60.0% | |
| CTGGTCCGAGTTTCCGACGA+AGG | - | chr3.3:50003300-50003319 | MS.gene08119:intron | 60.0% | |
| GCCACTTGCTTCCATGCCTG+CGG | + | chr3.3:50005687-50005706 | None:intergenic | 60.0% | |
| !! | AGTTGCTGAGGACTGGCTCG+AGG | - | chr3.3:50002313-50002332 | MS.gene08119:CDS | 60.0% |
| AGGAGAGGAGGCAGGGACCT+TGG | - | chr3.3:50003275-50003294 | MS.gene08119:intron | 65.0% | |
| CACTGTCCTCCCCGAAGCAC+TGG | - | chr3.3:50003597-50003616 | MS.gene08119:CDS | 65.0% | |
| CCACCTTCTGTGGCATCCCC+AGG | + | chr3.3:50003089-50003108 | None:intergenic | 65.0% | |
| CCGGTTCAAGGAGAGGAGGC+AGG | - | chr3.3:50003267-50003286 | MS.gene08119:intron | 65.0% | |
| CCTGGGGATGCCACAGAAGG+TGG | - | chr3.3:50003086-50003105 | MS.gene08119:intron | 65.0% | |
| GGAGGCAGGGACCTTGGAAC+TGG | - | chr3.3:50003281-50003300 | MS.gene08119:intron | 65.0% | |
| !! | GTGGCGGAGGTGCTTATCCC+AGG | - | chr3.3:50005635-50005654 | MS.gene08119:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 50000748 | 50007372 | 50000748 | ID=MS.gene08119 |
| chr3.3 | mRNA | 50000748 | 50007372 | 50000748 | ID=MS.gene08119.t1;Parent=MS.gene08119 |
| chr3.3 | exon | 50007166 | 50007372 | 50007166 | ID=MS.gene08119.t1.exon1;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50007166 | 50007372 | 50007166 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50006165 | 50006344 | 50006165 | ID=MS.gene08119.t1.exon2;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50006165 | 50006344 | 50006165 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50005786 | 50005962 | 50005786 | ID=MS.gene08119.t1.exon3;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50005786 | 50005962 | 50005786 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50005607 | 50005692 | 50005607 | ID=MS.gene08119.t1.exon4;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50005607 | 50005692 | 50005607 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50005298 | 50005487 | 50005298 | ID=MS.gene08119.t1.exon5;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50005298 | 50005487 | 50005298 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50004960 | 50005052 | 50004960 | ID=MS.gene08119.t1.exon6;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50004960 | 50005052 | 50004960 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50004686 | 50004864 | 50004686 | ID=MS.gene08119.t1.exon7;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50004686 | 50004864 | 50004686 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50004427 | 50004544 | 50004427 | ID=MS.gene08119.t1.exon8;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50004427 | 50004544 | 50004427 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50004207 | 50004335 | 50004207 | ID=MS.gene08119.t1.exon9;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50004207 | 50004335 | 50004207 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50003767 | 50003985 | 50003767 | ID=MS.gene08119.t1.exon10;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50003767 | 50003985 | 50003767 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50003477 | 50003680 | 50003477 | ID=MS.gene08119.t1.exon11;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50003477 | 50003680 | 50003477 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50002699 | 50002857 | 50002699 | ID=MS.gene08119.t1.exon12;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50002699 | 50002857 | 50002699 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50002252 | 50002515 | 50002252 | ID=MS.gene08119.t1.exon13;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50002252 | 50002515 | 50002252 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50001361 | 50001551 | 50001361 | ID=MS.gene08119.t1.exon14;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50001361 | 50001551 | 50001361 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| chr3.3 | exon | 50000748 | 50000874 | 50000748 | ID=MS.gene08119.t1.exon15;Parent=MS.gene08119.t1 |
| chr3.3 | CDS | 50000748 | 50000874 | 50000748 | ID=cds.MS.gene08119.t1;Parent=MS.gene08119.t1 |
| Gene Sequence |
| Protein sequence |
