AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08620.t1 MTR_4g059680 94.994 839 42 0 1 839 1 839 0.0 1632
MS.gene08620.t1 MTR_2g094060 80.833 840 151 4 1 838 1 832 0.0 1408
MS.gene08620.t1 MTR_2g094020 79.048 840 170 3 1 838 1 836 0.0 1392
MS.gene08620.t1 MTR_2g094060 80.841 809 145 4 1 807 1 801 0.0 1354
MS.gene08620.t1 MTR_2g094060 82.133 694 114 4 1 692 1 686 0.0 1182
MS.gene08620.t1 MTR_8g016230 54.664 847 360 11 5 839 4 838 0.0 922
MS.gene08620.t1 MTR_5g021190 55.217 853 351 14 1 838 1 837 0.0 921
MS.gene08620.t1 MTR_2g100110 54.633 831 353 11 21 839 23 841 0.0 907
MS.gene08620.t1 MTR_8g085210 52.130 892 362 18 1 838 16 896 0.0 892
MS.gene08620.t1 MTR_2g039120 56.403 734 294 8 2 725 8 725 0.0 843
MS.gene08620.t1 MTR_2g042610 51.240 847 368 15 8 838 11 828 0.0 836
MS.gene08620.t1 MTR_1g018200 57.363 713 281 9 24 725 29 729 0.0 824
MS.gene08620.t1 MTR_1g023120 56.006 716 289 9 26 729 29 730 0.0 815
MS.gene08620.t1 MTR_2g039120 56.366 699 279 8 2 690 8 690 0.0 800
MS.gene08620.t1 MTR_3g112370 54.032 744 296 12 7 732 17 732 0.0 797
MS.gene08620.t1 MTR_3g096900 56.681 711 291 10 24 722 25 730 0.0 790
MS.gene08620.t1 MTR_5g025830 48.862 835 374 15 26 838 28 831 0.0 788
MS.gene08620.t1 MTR_5g024080 48.616 831 383 15 22 838 6 806 0.0 782
MS.gene08620.t1 MTR_1g023120 55.394 686 280 9 56 729 1 672 0.0 763
MS.gene08620.t1 MTR_3g005570 46.968 841 393 15 10 838 10 809 0.0 759
MS.gene08620.t1 MTR_3g096900 56.112 679 281 10 24 690 25 698 0.0 739
MS.gene08620.t1 MTR_2g039120 56.082 633 254 7 2 624 8 626 0.0 717
MS.gene08620.t1 MTR_2g039120 57.239 594 233 6 2 588 8 587 0.0 693
MS.gene08620.t1 MTR_3g117840 43.510 832 417 17 24 839 33 827 0.0 687
MS.gene08620.t1 MTR_4g073290 45.030 835 399 21 26 838 28 824 0.0 686
MS.gene08620.t1 MTR_2g100110 57.739 575 227 6 21 588 23 588 0.0 686
MS.gene08620.t1 MTR_3g096910 48.299 735 335 14 6 730 7 706 0.0 672
MS.gene08620.t1 MTR_3g096900 57.002 607 245 8 24 619 25 626 0.0 669
MS.gene08620.t1 MTR_3g088520 48.945 711 318 11 24 729 24 694 0.0 660
MS.gene08620.t1 MTR_3g088520 48.012 679 308 11 56 729 1 639 0.0 612
MS.gene08620.t1 MTR_3g096910 45.008 591 280 14 150 730 1 556 1.28e-159 477
MS.gene08620.t1 MTR_5g022590 40.483 331 158 8 45 373 11 304 2.05e-75 252
MS.gene08620.t1 MTR_5g022590 34.615 130 70 3 683 803 295 418 3.08e-14 76.3
MS.gene08620.t1 MTR_4g126330 35.422 415 156 13 283 690 133 442 9.13e-59 207
MS.gene08620.t1 MTR_4g126330 68.478 92 29 0 81 172 25 116 1.10e-36 144
MS.gene08620.t1 MTR_3g005610 38.112 286 141 8 437 714 23 280 8.38e-43 158
MS.gene08620.t1 MTR_2g059440 35.974 303 155 10 437 729 23 296 7.29e-36 138
MS.gene08620.t1 MTR_2g100000 30.793 328 186 8 36 332 64 381 8.83e-32 132
MS.gene08620.t1 MTR_2g059430 33.574 277 123 6 456 729 10 228 3.55e-28 114
MS.gene08620.t1 MTR_2g100000 28.968 252 138 8 112 332 2 243 5.62e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08620.t1 AT2G28470 72.749 833 208 7 20 839 26 852 0.0 1259
MS.gene08620.t1 AT2G28470 72.749 833 208 7 20 839 26 852 0.0 1259
MS.gene08620.t1 AT2G28470 73.012 830 211 7 20 839 20 846 0.0 1259
MS.gene08620.t1 AT2G28470 73.012 830 211 7 20 839 20 846 0.0 1259
MS.gene08620.t1 AT2G28470 74.817 683 156 5 20 692 26 702 0.0 1061
MS.gene08620.t1 AT4G36360 54.152 855 347 15 6 838 14 845 0.0 914
MS.gene08620.t1 AT2G32810 52.638 872 372 15 2 839 13 877 0.0 912
MS.gene08620.t1 AT4G36360 54.152 855 346 16 6 838 14 844 0.0 910
MS.gene08620.t1 AT3G13750 54.340 841 359 13 11 839 20 847 0.0 909
MS.gene08620.t1 AT2G32810 52.808 837 355 14 2 805 13 842 0.0 883
MS.gene08620.t1 AT5G20710 49.474 855 384 16 1 838 3 826 0.0 828
MS.gene08620.t1 AT3G52840 56.197 710 287 9 26 725 83 778 0.0 808
MS.gene08620.t1 AT3G52840 56.197 710 287 9 26 725 29 724 0.0 806
MS.gene08620.t1 AT1G45130 55.694 720 288 10 23 727 28 731 0.0 800
MS.gene08620.t1 AT4G26140 55.085 708 299 8 26 725 29 725 0.0 800
MS.gene08620.t1 AT4G26140 53.615 733 296 11 26 725 29 750 0.0 787
MS.gene08620.t1 AT5G63810 53.389 723 312 11 23 730 29 741 0.0 781
MS.gene08620.t1 AT5G56870 53.631 716 299 11 24 725 27 723 0.0 774
MS.gene08620.t1 AT1G31740 47.877 848 356 17 8 838 1 779 0.0 756
MS.gene08620.t1 AT4G26140 53.582 698 280 11 26 690 29 715 0.0 746
MS.gene08620.t1 AT1G77410 46.846 856 397 19 1 839 1 815 0.0 731
MS.gene08620.t1 AT1G77410 46.574 861 397 20 1 839 1 820 0.0 725
MS.gene08620.t1 AT1G45130 54.116 656 270 10 87 727 13 652 0.0 696
MS.gene08620.t1 AT4G26140 55.501 609 246 8 26 623 29 623 0.0 687
MS.gene08620.t1 AT4G26140 55.501 609 246 8 26 623 29 623 0.0 687
MS.gene08620.t1 AT4G26140 55.941 606 250 7 26 623 29 625 0.0 686
MS.gene08620.t1 AT5G63800 47.188 729 345 10 3 724 9 704 0.0 658
MS.gene08620.t1 AT2G16730 42.584 836 420 21 26 838 44 842 0.0 655
MS.gene08620.t1 AT4G35010 40.428 841 435 16 24 838 39 839 0.0 639
MS.gene08620.t1 AT4G26140 59.091 528 203 5 26 548 29 548 0.0 637
MS.gene08620.t1 AT4G26140 56.962 553 200 8 26 548 29 573 0.0 625
MS.gene08620.t1 AT4G26140 56.962 553 200 8 26 548 29 573 0.0 625
MS.gene08620.t1 AT4G38590 40.598 803 421 19 56 838 1 767 0.0 607
MS.gene08620.t1 AT4G38590 40.224 803 428 18 52 838 65 831 0.0 598
MS.gene08620.t1 AT1G77410 45.144 731 344 19 126 839 19 709 0.0 582
MS.gene08620.t1 AT1G77410 45.144 731 344 19 126 839 19 709 0.0 582
MS.gene08620.t1 AT5G20710 46.472 652 301 16 204 838 1 621 0.0 568
MS.gene08620.t1 AT2G04060 36.486 370 156 7 291 657 23 316 4.29e-57 203
MS.gene08620.t1 AT1G72990 34.043 376 187 12 7 336 34 394 3.43e-43 168
MS.gene08620.t1 AT1G72990 34.043 376 187 12 7 336 34 394 3.43e-43 168
MS.gene08620.t1 AT1G72990 35.119 336 169 10 36 336 18 339 1.22e-42 166
MS.gene08620.t1 AT1G72990 34.462 325 164 10 47 336 22 332 5.27e-38 151
MS.gene08620.t1 AT2G04062 40.782 179 83 3 21 198 2 158 5.93e-38 139
MS.gene08620.t1 AT3G53080 39.130 92 54 2 749 839 63 153 5.88e-17 79.3
MS.gene08620.t1 AT3G53075 38.824 85 49 3 756 839 81 163 9.70e-12 64.7
MS.gene08620.t1 AT3G53075 38.824 85 49 3 756 839 111 193 1.09e-11 65.1

Find 217 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTCTTCGCAAAGCTTTA+TGG 0.065547 4.1:-39034027 None:intergenic
CTGCTAAAACCTACATAAAT+TGG 0.149156 4.1:+39032899 MS.gene08620:CDS
TCCAAAGCTTGCAAATTTAA+TGG 0.180156 4.1:-39036141 None:intergenic
AAAAGAAAAGGTTGATTCTT+TGG 0.204153 4.1:+39034484 MS.gene08620:CDS
TAAACAGTGGTTTCCCTCTT+TGG 0.206116 4.1:+39032567 MS.gene08620:intron
GTGATATGAATTGCCATTAA+AGG 0.210455 4.1:-39034275 None:intergenic
TCCATTAAATTTGCAAGCTT+TGG 0.229371 4.1:+39036140 MS.gene08620:CDS
GGAAACATTGATAGTCATTA+TGG 0.238465 4.1:+39032871 MS.gene08620:CDS
CCTCTTATTACCTCAAGATT+TGG 0.243138 4.1:-39034086 None:intergenic
GCATGTGCTGAATGGAATTA+TGG 0.269866 4.1:+39032453 MS.gene08620:CDS
AACCATAGGTTTCTTGCATT+TGG 0.290523 4.1:+39033412 MS.gene08620:intron
TTTCCAGTTACAAGTGTAAT+AGG 0.294107 4.1:-39034977 None:intergenic
ACATACATCTCTTCGAATTC+TGG 0.294877 4.1:+39035635 MS.gene08620:CDS
GATGCAACGGTAACCTTTAA+TGG 0.296338 4.1:+39034262 MS.gene08620:CDS
GAGTTTAACAGTGGGATTAC+AGG 0.301605 4.1:+39035018 MS.gene08620:CDS
ATCTTTAAGATGACCCCATT+TGG 0.301972 4.1:-39033994 None:intergenic
GGAGTATCAATTAATACATT+TGG 0.304581 4.1:+39036377 MS.gene08620:CDS
TGCCAGATTGAAAATGAGTA+TGG 0.308621 4.1:+39032850 MS.gene08620:intron
AGAACCTGAGATAAAATTAT+AGG 0.311018 4.1:-39032716 None:intergenic
CATCTTTAGATTTCTGAATA+AGG 0.314571 4.1:-39031993 None:intergenic
ACTACTTATGGTACTCATTA+AGG 0.319553 4.1:+39034621 MS.gene08620:CDS
TTTGGTTTCTTGTCAGAGTT+TGG 0.319854 4.1:-39033250 None:intergenic
TCCACAATTCTTGAGGCATT+TGG 0.332078 4.1:-39035699 None:intergenic
CGCTTCATTTCTGCCTTGAA+TGG 0.335322 4.1:-39032632 None:intergenic
TCTTTGGACGGTTCAAGTTC+AGG 0.335464 4.1:+39034500 MS.gene08620:CDS
CAAGTCAAAGGTTGATTTGT+AGG 0.348113 4.1:-39035416 None:intergenic
AGATCTTCCACTGGTCTATA+AGG 0.348264 4.1:-39033445 None:intergenic
CCTGATGCTTTCACAAAATC+TGG 0.350297 4.1:+39034560 MS.gene08620:CDS
ATGGAAGAGATCACCTGATT+AGG 0.352051 4.1:-39036122 None:intergenic
ATACCTATTACACTTGTAAC+TGG 0.364105 4.1:+39034974 MS.gene08620:CDS
CAACACTCTTGTATTGTTTG+AGG 0.367378 4.1:+39035938 MS.gene08620:CDS
CGGAAGCTGCAGCAGCAATA+AGG 0.368701 4.1:+39036196 MS.gene08620:CDS
AATACAAGAGTGTTGCTATC+TGG 0.369099 4.1:-39035930 None:intergenic
CATAAATTGGGCAGCATCAA+TGG 0.374233 4.1:+39032912 MS.gene08620:CDS
ACCTGCAGACACGTGGAATT+CGG 0.383734 4.1:+39036046 MS.gene08620:CDS
GATTGCAACCGGGTTACTTC+CGG 0.384379 4.1:-39035546 None:intergenic
GGATCGAGCAGTTGTAATAT+TGG 0.385397 4.1:+39036356 MS.gene08620:CDS
GACAAAGCATAGGGCGATAC+TGG 0.388078 4.1:+39035609 MS.gene08620:CDS
CTGATAGAAGTGACTACTTA+TGG 0.392996 4.1:+39034609 MS.gene08620:CDS
GGCTCTATCCATTGTGCAAA+AGG 0.395892 4.1:+39036217 MS.gene08620:CDS
CCCGTGAAGTCGATTGCAAC+CGG 0.400569 4.1:-39035557 None:intergenic
ACTGACTCATGCAATTATAA+AGG 0.402609 4.1:+39035662 MS.gene08620:CDS
TCTTTAAGATGACCCCATTT+GGG 0.405598 4.1:-39033993 None:intergenic
GGATGGGAAAAGGCGAAGCT+TGG 0.408250 4.1:+39035579 MS.gene08620:CDS
GGAATGCCCTTATCCTAATC+AGG 0.408387 4.1:+39036109 MS.gene08620:CDS
GACCCCTCGAAAATATCTTT+TGG 0.408702 4.1:+39035972 MS.gene08620:CDS
GGCCTTCAAGGTGAATTTGT+AGG 0.411186 4.1:+39035347 MS.gene08620:CDS
TCAGTTCGGAACTTAATTCC+CGG 0.413936 4.1:-39032602 None:intergenic
AAACGCAGGGTTCTTATGTC+TGG 0.420682 4.1:+39031609 MS.gene08620:CDS
GACCTACAAATTCACCTTGA+AGG 0.421965 4.1:-39035349 None:intergenic
GAGATATTAGACAGCCCAAA+TGG 0.429273 4.1:+39033979 MS.gene08620:CDS
TGAATGCAGGTTGGCCTTCA+AGG 0.430429 4.1:+39035335 MS.gene08620:intron
CTCACAGCAATGGACATATC+AGG 0.438762 4.1:+39035232 MS.gene08620:CDS
CGTGCCGATGTTGGCAATGA+AGG 0.441432 4.1:-39034236 None:intergenic
GGACCAGGAGATGAAATTGT+TGG 0.444900 4.1:-39034065 None:intergenic
ACTAACTTTGGTCGAACAAC+CGG 0.451552 4.1:+39033787 MS.gene08620:CDS
TGCCTGGTTGCACATAATCC+AGG 0.452032 4.1:-39032959 None:intergenic
GAGATCACCTGATTAGGATA+AGG 0.452217 4.1:-39036116 None:intergenic
AACAGAACCTGGCCTCGAAC+CGG 0.453067 4.1:-39032063 None:intergenic
CTCTTGATACAGGTGTTCCC+TGG 0.453533 4.1:+39032941 MS.gene08620:CDS
CATAGAGCATTGGTCATTGA+TGG 0.456546 4.1:+39031585 MS.gene08620:CDS
TTCAAACCTTTCAATACTAC+CGG 0.456640 4.1:-39035185 None:intergenic
GATGGGAAAAGGCGAAGCTT+GGG 0.456806 4.1:+39035580 MS.gene08620:CDS
GAAACATTGATAGTCATTAT+GGG 0.457798 4.1:+39032872 MS.gene08620:CDS
GACTTCACGGGGATGGGAAA+AGG 0.458591 4.1:+39035569 MS.gene08620:CDS
GACCAATGCTCTATGATCAT+AGG 0.458614 4.1:-39031577 None:intergenic
AACTGAATCTTCAAAAGAAA+AGG 0.459955 4.1:+39034472 MS.gene08620:CDS
AACTGATAATGAACCATTCA+AGG 0.462366 4.1:+39032619 MS.gene08620:CDS
GATGCACCCATTGATGAGTA+TGG 0.462427 4.1:+39033841 MS.gene08620:CDS
GGCAATTCATATCACTTGCC+TGG 0.464088 4.1:+39034283 MS.gene08620:CDS
TGAATGGTTCATTATCAGTT+CGG 0.464695 4.1:-39032616 None:intergenic
CATAGGTTTCTTGCATTTGG+AGG 0.464730 4.1:+39033415 MS.gene08620:intron
TTATCCTCGTAGCACTCCTC+AGG 0.464838 4.1:+39031641 MS.gene08620:CDS
TGCAATCGACTTCACGGGGA+TGG 0.465293 4.1:+39035562 MS.gene08620:CDS
AGATCACCTGATTAGGATAA+GGG 0.465515 4.1:-39036115 None:intergenic
AGTACAACATTCTTGCAGTC+TGG 0.465954 4.1:-39034325 None:intergenic
ACAGTGGGTGCGGGGATCAC+CGG 0.467033 4.1:+39035161 MS.gene08620:CDS
TCCGAATTCCACGTGTCTGC+AGG 0.467668 4.1:-39036047 None:intergenic
TTAGATTTCTGAATAAGGTC+AGG 0.467971 4.1:-39031988 None:intergenic
TGCTAAAACCTACATAAATT+GGG 0.471019 4.1:+39032900 MS.gene08620:CDS
TTGCATACCATACTCATCAA+TGG 0.471095 4.1:-39033848 None:intergenic
GTCCTTCACATTGAATCCCT+TGG 0.471874 4.1:+39034762 MS.gene08620:CDS
GCACGAACCGGTTCGAGGCC+AGG 0.474407 4.1:+39032056 MS.gene08620:CDS
TGATGCTGCCCAATTTATGT+AGG 0.475082 4.1:-39032908 None:intergenic
CTACAAATCAACCTTTGACT+TGG 0.475174 4.1:+39035417 MS.gene08620:CDS
GTCCATACGCATGTGCTGAA+TGG 0.478791 4.1:+39032445 MS.gene08620:CDS
TTGGATCAGGTGCATTTGCC+TGG 0.479376 4.1:-39032975 None:intergenic
CTCTTTGTTACTCCTCGACA+TGG 0.479429 4.1:-39036404 None:intergenic
AGATATTAGACAGCCCAAAT+GGG 0.481567 4.1:+39033980 MS.gene08620:CDS
CTTATTCAGAAATCTAAAGA+TGG 0.482049 4.1:+39031994 MS.gene08620:CDS
GGGTGCGGGGATCACCGGTC+CGG 0.482231 4.1:+39035166 MS.gene08620:CDS
CCCGGTTGCAATCGACTTCA+CGG 0.483140 4.1:+39035556 MS.gene08620:CDS
GTTCAAGTTCAGGATGGAGT+TGG 0.483521 4.1:+39034510 MS.gene08620:CDS
TTTGTAAATGGGAAGCTAGC+TGG 0.483805 4.1:+39034801 MS.gene08620:CDS
TCAACCTTTGACTTGGTACA+AGG 0.485783 4.1:+39035424 MS.gene08620:CDS
TTTCTGGAACCTGCACGAAC+CGG 0.487239 4.1:+39032044 MS.gene08620:CDS
CAGGTCTTTATGTGCATCTC+CGG 0.488160 4.1:+39032418 MS.gene08620:CDS
ATTCATATCACTTGCCTGGA+TGG 0.489568 4.1:+39034287 MS.gene08620:CDS
GAAGGCAGGGGAGATTTGGT+TGG 0.491644 4.1:+39032372 MS.gene08620:CDS
TTCCACGTGTCTGCAGGTGG+AGG 0.493812 4.1:-39036041 None:intergenic
ATGGCTACGTCTCTTGATAC+AGG 0.494694 4.1:+39032931 MS.gene08620:CDS
GGGAGTAAAGCAGGCAACTA+CGG 0.495234 4.1:+39034929 MS.gene08620:intron
GGAACGCCTCGTGGGACTTG+TGG 0.497693 4.1:+39036161 MS.gene08620:CDS
TGCATACCATACTCATCAAT+GGG 0.498173 4.1:-39033847 None:intergenic
GATCATTAACAGGCCTGCAT+TGG 0.499411 4.1:+39036335 MS.gene08620:intron
AGAAAACATACAATTGGATC+AGG 0.500890 4.1:-39032988 None:intergenic
GGTAGGTCCTGTACTGTCAC+TGG 0.504465 4.1:+39036088 MS.gene08620:CDS
ACGAACTTTGTTGCTCCCTC+CGG 0.508772 4.1:+39035527 MS.gene08620:CDS
TGTTGAAGCTGCTTGTACAT+AGG 0.510023 4.1:+39036433 MS.gene08620:CDS
GTGAAGGCGGTAGCAGCAGC+AGG 0.510569 4.1:+39032399 MS.gene08620:CDS
CATGTGCTGAATGGAATTAT+GGG 0.511728 4.1:+39032454 MS.gene08620:CDS
TGCTCCCTCCGGAAGTAACC+CGG 0.513590 4.1:+39035538 MS.gene08620:CDS
GAAAAGGTTGATTCTTTGGA+CGG 0.515087 4.1:+39034488 MS.gene08620:CDS
TTCCATTCAGCACATGCGTA+TGG 0.516436 4.1:-39032447 None:intergenic
GGCCTCGAACCGGTTCGTGC+AGG 0.517680 4.1:-39032053 None:intergenic
TCCCATTTACAAAAGCATGA+AGG 0.520336 4.1:-39034791 None:intergenic
GCAATCGACTTCACGGGGAT+GGG 0.522163 4.1:+39035563 MS.gene08620:CDS
CCGGTTGCAATCGACTTCAC+GGG 0.523036 4.1:+39035557 MS.gene08620:CDS
TATTGCTGCTGCAGCTTCCG+TGG 0.525562 4.1:-39036193 None:intergenic
TACCATGGAGGGACTAACTT+TGG 0.528934 4.1:+39033775 MS.gene08620:CDS
AACCTGCACGAACCGGTTCG+AGG 0.532084 4.1:+39032051 MS.gene08620:CDS
CCCATTTACAAAAGCATGAA+GGG 0.534035 4.1:-39034790 None:intergenic
TTATTCAGAAATCTAAAGAT+GGG 0.534082 4.1:+39031995 MS.gene08620:CDS
AGGGATTCAATGTGAAGGAC+AGG 0.537577 4.1:-39034759 None:intergenic
GGATACAGAATCAGAAAGAA+AGG 0.538630 4.1:+39036067 MS.gene08620:CDS
AGATTTGGTTGGATTTGTGA+AGG 0.546051 4.1:+39032383 MS.gene08620:CDS
TCCAAATGCCTCAAGAATTG+TGG 0.547245 4.1:+39035698 MS.gene08620:CDS
GCAAGCTTTGGAACGCCTCG+TGG 0.548709 4.1:+39036152 MS.gene08620:CDS
TGCATCAGACGTGCCGATGT+TGG 0.549802 4.1:-39034245 None:intergenic
ACCTTTCAATACTACCGGAC+CGG 0.550202 4.1:-39035180 None:intergenic
ACAACTGCTCGATCCAATGC+AGG 0.550387 4.1:-39036348 None:intergenic
GATCCAACAATTTCATCTCC+TGG 0.553247 4.1:+39034062 MS.gene08620:CDS
ACCGGTCCGGTAGTATTGAA+AGG 0.554176 4.1:+39035179 MS.gene08620:CDS
TCGATCTCTCCTCACAGCAA+TGG 0.555757 4.1:+39035222 MS.gene08620:CDS
TCATAACTCGTTGAAATGAA+AGG 0.557342 4.1:-39033814 None:intergenic
AGCATGAAGGGCATGACCAA+GGG 0.558566 4.1:-39034778 None:intergenic
CAAGCTTTGGAACGCCTCGT+GGG 0.559827 4.1:+39036153 MS.gene08620:CDS
GAATAAAATGCAACCAAAGA+GGG 0.559955 4.1:-39032580 None:intergenic
CTTGTATTGTTTGAGGAAAG+CGG 0.561204 4.1:+39035945 MS.gene08620:CDS
AAAGGCGAAGCTTGGGTGAA+CGG 0.561913 4.1:+39035587 MS.gene08620:CDS
ATCTCCTGGTCCAAATCTTG+AGG 0.562523 4.1:+39034076 MS.gene08620:CDS
TGGTCATTGATGGCAAACGC+AGG 0.563477 4.1:+39031595 MS.gene08620:CDS
AGTGCTACGAGGATAATGAA+TGG 0.564480 4.1:-39031634 None:intergenic
ATTACCTTGTACCAAGTCAA+AGG 0.567749 4.1:-39035428 None:intergenic
GAATTTGTAGGTCTGTCTAG+TGG 0.568090 4.1:+39035359 MS.gene08620:CDS
GCGGTTTACTGCTAAGATTG+TGG 0.568627 4.1:+39032652 MS.gene08620:CDS
TGGGTGAACGGACAAAGCAT+AGG 0.569142 4.1:+39035599 MS.gene08620:CDS
CAGACTGCAGTTTACAAGAC+AGG 0.570791 4.1:+39034199 MS.gene08620:intron
AATTTGTAGGTCTGTCTAGT+GGG 0.571355 4.1:+39035360 MS.gene08620:CDS
CATCGGCACGTCTGATGCAA+CGG 0.572162 4.1:+39034249 MS.gene08620:CDS
TACCTATGATCATAGAGCAT+TGG 0.573341 4.1:+39031575 MS.gene08620:CDS
GCCTGGTTGCACATAATCCA+GGG 0.575025 4.1:-39032958 None:intergenic
AACACTTACAATGTCTGTGA+TGG 0.576570 4.1:-39035725 None:intergenic
CTTTATGTGCATCTCCGGAT+CGG 0.576900 4.1:+39032423 MS.gene08620:CDS
ACTTGTGGAAACTACAACCA+CGG 0.577165 4.1:+39036176 MS.gene08620:CDS
GATATCATGTACCGCGATCG+TGG 0.584092 4.1:+39035901 MS.gene08620:intron
AGATGAAATTGTTGGATCAG+TGG 0.585790 4.1:-39034057 None:intergenic
AAGCATGAAGGGCATGACCA+AGG 0.589317 4.1:-39034779 None:intergenic
GTGAAGGACAGGTTGAGCAC+CGG 0.589414 4.1:-39034748 None:intergenic
GGGCATTCCAGTGACAGTAC+AGG 0.590217 4.1:-39036095 None:intergenic
TGTTGTACTCAATACTGCAA+AGG 0.591137 4.1:+39034339 MS.gene08620:CDS
CGTTGAAATGAAAGGTCCAC+CGG 0.592253 4.1:-39033806 None:intergenic
ACCCTCCACCTGCAGACACG+TGG 0.593234 4.1:+39036039 MS.gene08620:CDS
GGGTGAACGGACAAAGCATA+GGG 0.594372 4.1:+39035600 MS.gene08620:CDS
GGTCTGTCTAGTGGGAATGT+TGG 0.595192 4.1:+39035368 MS.gene08620:CDS
ACAGAATCAGAAAGAAAGGT+AGG 0.595329 4.1:+39036071 MS.gene08620:CDS
GGAATAAAATGCAACCAAAG+AGG 0.597433 4.1:-39032581 None:intergenic
TGCAACCGGGTTACTTCCGG+AGG 0.598481 4.1:-39035543 None:intergenic
GAATTCGAAGAGATGTATGT+TGG 0.598592 4.1:-39035632 None:intergenic
AACTTTGGTCGAACAACCGG+TGG 0.598834 4.1:+39033790 MS.gene08620:CDS
TATTCAGAAATCTAAAGATG+GGG 0.599714 4.1:+39031996 MS.gene08620:CDS
TGGACGGTTCAAGTTCAGGA+TGG 0.600414 4.1:+39034504 MS.gene08620:CDS
CCGTGAAGTCGATTGCAACC+GGG 0.601198 4.1:-39035556 None:intergenic
CTCTAAAATAGTACCATGGA+GGG 0.602725 4.1:+39033764 MS.gene08620:intron
TTTATGACACAGTGGGTGCG+GGG 0.603678 4.1:+39035153 MS.gene08620:CDS
ATTACCTCAAGATTTGGACC+AGG 0.604915 4.1:-39034080 None:intergenic
GCAAAAGCAAGATCTTCCAC+TGG 0.605145 4.1:-39033454 None:intergenic
GGTCATTGATGGCAAACGCA+GGG 0.610495 4.1:+39031596 MS.gene08620:CDS
GAATTCCACGTGTCTGCAGG+TGG 0.610630 4.1:-39036044 None:intergenic
TCAGGCGTTGAAATACCGAC+AGG 0.613348 4.1:-39034542 None:intergenic
CATTCAAGGCAGAAATGAAG+CGG 0.614333 4.1:+39032633 MS.gene08620:CDS
TCCACGTGTCTGCAGGTGGA+GGG 0.614573 4.1:-39036040 None:intergenic
TCTATGATCATAGGTAACAT+TGG 0.616006 4.1:-39031568 None:intergenic
GACCAAAGTTAGTCCCTCCA+TGG 0.620997 4.1:-39033777 None:intergenic
TGCTGTGCCTTATAGACCAG+TGG 0.621467 4.1:+39033438 MS.gene08620:CDS
CACATGCGTATGGACCGATC+CGG 0.623729 4.1:-39032437 None:intergenic
AAGATGCTCACAGACCATCC+AGG 0.623987 4.1:-39034301 None:intergenic
TCCCTGGATTATGTGCAACC+AGG 0.626754 4.1:+39032957 MS.gene08620:CDS
TTTGGTTGGATTTGTGAAGG+CGG 0.631236 4.1:+39032386 MS.gene08620:CDS
GATATTAGACAGCCCAAATG+GGG 0.631786 4.1:+39033981 MS.gene08620:CDS
ATGTGGACTGAGAATTGGAG+TGG 0.633627 4.1:+39033274 MS.gene08620:CDS
GACCAAGGGATTCAATGTGA+AGG 0.636131 4.1:-39034764 None:intergenic
GGACTGAGAATTGGAGTGGA+TGG 0.637893 4.1:+39033278 MS.gene08620:CDS
ACATTTGGAAATCCATGTCG+AGG 0.640103 4.1:+39036392 MS.gene08620:CDS
CGATCTCCTGAGTTTAACAG+TGG 0.642971 4.1:+39035009 MS.gene08620:CDS
GTAATCCCACTGTTAAACTC+AGG 0.649493 4.1:-39035015 None:intergenic
ATTCAGAAATCTAAAGATGG+GGG 0.651429 4.1:+39031997 MS.gene08620:CDS
AGGCAACTACGGAAACGTGA+AGG 0.658666 4.1:+39034940 MS.gene08620:CDS
GAGAATCTCTATGCATCACA+AGG 0.664083 4.1:+39032689 MS.gene08620:CDS
CTTGCTCTAAAATAGTACCA+TGG 0.665790 4.1:+39033760 MS.gene08620:intron
GATCTCCTGAGTTTAACAGT+GGG 0.669209 4.1:+39035010 MS.gene08620:CDS
ATTGTTGATGAAGATACTGC+CGG 0.669245 4.1:+39034729 MS.gene08620:CDS
TCTGGCTTCAACCACGATCG+CGG 0.670748 4.1:-39035912 None:intergenic
TCTGCCTTCATTGCCAACAT+CGG 0.671738 4.1:+39034232 MS.gene08620:CDS
CGGTTGCAATCGACTTCACG+GGG 0.684412 4.1:+39035558 MS.gene08620:CDS
GCAACCGGGTTACTTCCGGA+GGG 0.689642 4.1:-39035542 None:intergenic
GCTCTAAAATAGTACCATGG+AGG 0.695242 4.1:+39033763 MS.gene08620:intron
TCATCTTAAAGATTTGCACA+AGG 0.698045 4.1:+39034004 MS.gene08620:CDS
AGTTGGATTAGTGAACCTGT+CGG 0.705602 4.1:+39034527 MS.gene08620:CDS
TAGTTTCCACAAGTCCCACG+AGG 0.717747 4.1:-39036167 None:intergenic
CGGAAACGTGAAGGTCAACG+TGG 0.719577 4.1:+39034949 MS.gene08620:CDS
CTAGTGGGAATGTTGGACAG+TGG 0.720350 4.1:+39035375 MS.gene08620:CDS
AATCTCTATGCATCACAAGG+AGG 0.731755 4.1:+39032692 MS.gene08620:CDS
CTGATATGTCCATTGCTGTG+AGG 0.748601 4.1:-39035231 None:intergenic
ACTCGAGCAAATAAACACGA+CGG 0.751802 4.1:+39034586 MS.gene08620:CDS
GAAACCTGAGGAGTGCTACG+AGG 0.752357 4.1:-39031645 None:intergenic
GTATTGTTTGAGGAAAGCGG+AGG 0.756855 4.1:+39035948 MS.gene08620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTGTTCAAAATAAATA+TGG - chr4.1:39033885-39033904 None:intergenic 10.0%
!! ATGAAAATTAACAATTAAGT+AGG - chr4.1:39033167-39033186 None:intergenic 15.0%
!!! TTTTCAATGTATCATTTTAA+GGG + chr4.1:39032489-39032508 MS.gene08620:intron 15.0%
!!! TTTTGGTGAATTAATTATAT+TGG + chr4.1:39035301-39035320 MS.gene08620:intron 15.0%
!! AATTGTGATCAAAACTTAAA+AGG - chr4.1:39034112-39034131 None:intergenic 20.0%
!! CAAAATGATTTAAATAGTGA+AGG - chr4.1:39033314-39033333 None:intergenic 20.0%
!! TCAGAAACATAATGAAAAAT+TGG - chr4.1:39032770-39032789 None:intergenic 20.0%
!! TTATTCAGAAATCTAAAGAT+GGG + chr4.1:39031995-39032014 MS.gene08620:CDS 20.0%
!! TTTGAACAATATTATGTACA+AGG + chr4.1:39033892-39033911 MS.gene08620:intron 20.0%
!!! AACTTTTCAAAATTACTACA+TGG + chr4.1:39033504-39033523 MS.gene08620:CDS 20.0%
!!! ATCTTTCTTTTTTTAGTGAA+AGG + chr4.1:39033041-39033060 MS.gene08620:intron 20.0%
!!! CTTTTCAATGTATCATTTTA+AGG + chr4.1:39032488-39032507 MS.gene08620:intron 20.0%
!!! TATATTTGTTATTGTAGATG+TGG + chr4.1:39031965-39031984 MS.gene08620:intron 20.0%
! AAAACAGAAGAACAATATGA+AGG - chr4.1:39032097-39032116 None:intergenic 25.0%
! AAAATAGTTGTGATATCAGT+TGG - chr4.1:39033733-39033752 None:intergenic 25.0%
! AACTGAATCTTCAAAAGAAA+AGG + chr4.1:39034472-39034491 MS.gene08620:CDS 25.0%
! AGAACCTGAGATAAAATTAT+AGG - chr4.1:39032719-39032738 None:intergenic 25.0%
! AGAAGACATCAAATTAATGA+CGG + chr4.1:39032318-39032337 MS.gene08620:intron 25.0%
! ATAACGAGAAAACATACAAT+TGG - chr4.1:39032997-39033016 None:intergenic 25.0%
! ATGGTTTCAAAGAATTCAAA+AGG - chr4.1:39033398-39033417 None:intergenic 25.0%
! CAAATTGAAAAAGGTTAACA+TGG - chr4.1:39034700-39034719 None:intergenic 25.0%
! CAGTGTAAAAACATTAACAT+CGG - chr4.1:39036275-39036294 None:intergenic 25.0%
! CATCTTTAGATTTCTGAATA+AGG - chr4.1:39031996-39032015 None:intergenic 25.0%
! CATTTACAACAACAAAATCA+TGG + chr4.1:39035071-39035090 MS.gene08620:intron 25.0%
! CTTATTCAGAAATCTAAAGA+TGG + chr4.1:39031994-39032013 MS.gene08620:CDS 25.0%
! GAAATTATAACTTCTATGTG+TGG + chr4.1:39032788-39032807 MS.gene08620:intron 25.0%
! GCTTCAAAACAAATTGAAAA+AGG - chr4.1:39034709-39034728 None:intergenic 25.0%
! GTATTGAAAGGTTTGAAAAA+TGG + chr4.1:39035191-39035210 MS.gene08620:CDS 25.0%
! TATTCAGAAATCTAAAGATG+GGG + chr4.1:39031996-39032015 MS.gene08620:CDS 25.0%
! TCAAAAGGAGAAACAAAAAT+AGG - chr4.1:39035280-39035299 None:intergenic 25.0%
! TGCTAAAACCTACATAAATT+GGG + chr4.1:39032900-39032919 MS.gene08620:CDS 25.0%
! TGTCATAATGGTATATAACA+CGG - chr4.1:39031769-39031788 None:intergenic 25.0%
! TTAATTCACCAAAACTCAAA+AGG - chr4.1:39035295-39035314 None:intergenic 25.0%
!! AAAAGAAAAGGTTGATTCTT+TGG + chr4.1:39034484-39034503 MS.gene08620:CDS 25.0%
!! AGTTTTCAAACTTAAAAGTG+TGG + chr4.1:39032146-39032165 MS.gene08620:intron 25.0%
!! GAAACATTGATAGTCATTAT+GGG + chr4.1:39032872-39032891 MS.gene08620:CDS 25.0%
!! GGAGTATCAATTAATACATT+TGG + chr4.1:39036377-39036396 MS.gene08620:CDS 25.0%
!! TAATAATACCTTTTGCACAA+TGG - chr4.1:39036228-39036247 None:intergenic 25.0%
!! TGTATGTTTTCTCGTTATAA+GGG + chr4.1:39032999-39033018 MS.gene08620:intron 25.0%
!! TTGTATGTTTTCTCGTTATA+AGG + chr4.1:39032998-39033017 MS.gene08620:intron 25.0%
!!! AAAGTTATTTTTCGTATGAC+AGG + chr4.1:39034418-39034437 MS.gene08620:intron 25.0%
!!! AAATTGTGTTTGTTTTGCTT+TGG + chr4.1:39031511-39031530 MS.gene08620:CDS 25.0%
!!! TATTTCCGAGAATTTTTTCA+GGG + chr4.1:39034909-39034928 MS.gene08620:intron 25.0%
!!! TTATTTCCGAGAATTTTTTC+AGG + chr4.1:39034908-39034927 MS.gene08620:intron 25.0%
!!! TTTGAATTCTTTGAAACCAT+AGG + chr4.1:39033398-39033417 MS.gene08620:intron 25.0%
AAAAAAAGCTATCTCAACCT+TGG - chr4.1:39034658-39034677 None:intergenic 30.0%
AATGGAATTATGGGTAAACT+TGG + chr4.1:39032463-39032482 MS.gene08620:intron 30.0%
AATTCAAAAGGTTGCAATAG+GGG - chr4.1:39033386-39033405 None:intergenic 30.0%
ACCATTATGACACTGATATA+TGG + chr4.1:39031777-39031796 MS.gene08620:intron 30.0%
ACTACTTATGGTACTCATTA+AGG + chr4.1:39034621-39034640 MS.gene08620:CDS 30.0%
AGAAAACATACAATTGGATC+AGG - chr4.1:39032991-39033010 None:intergenic 30.0%
AGAATTCAAAAGGTTGCAAT+AGG - chr4.1:39033388-39033407 None:intergenic 30.0%
AGTTTAAGCTCAAAGTTACT+AGG + chr4.1:39033695-39033714 MS.gene08620:intron 30.0%
ATACCTATTACACTTGTAAC+TGG + chr4.1:39034974-39034993 MS.gene08620:CDS 30.0%
ATATTATGTACAAGGCCATA+AGG + chr4.1:39033900-39033919 MS.gene08620:intron 30.0%
ATGAAGTACATACACATACA+TGG - chr4.1:39032211-39032230 None:intergenic 30.0%
ATTCAGAAATCTAAAGATGG+GGG + chr4.1:39031997-39032016 MS.gene08620:CDS 30.0%
CCATTATGACACTGATATAT+GGG + chr4.1:39031778-39031797 MS.gene08620:intron 30.0%
CTGCTAAAACCTACATAAAT+TGG + chr4.1:39032899-39032918 MS.gene08620:CDS 30.0%
GAAGACATCAAATTAATGAC+GGG + chr4.1:39032319-39032338 MS.gene08620:intron 30.0%
GAATAAAATGCAACCAAAGA+GGG - chr4.1:39032583-39032602 None:intergenic 30.0%
GAATTCAAAAGGTTGCAATA+GGG - chr4.1:39033387-39033406 None:intergenic 30.0%
GATGTTTGAACTTGTAACAA+TGG + chr4.1:39031942-39031961 MS.gene08620:intron 30.0%
GGGAAGAAAAATTAAAGACT+AGG - chr4.1:39032542-39032561 None:intergenic 30.0%
GTGATATGAATTGCCATTAA+AGG - chr4.1:39034278-39034297 None:intergenic 30.0%
TCATAACTCGTTGAAATGAA+AGG - chr4.1:39033817-39033836 None:intergenic 30.0%
TCATCTTAAAGATTTGCACA+AGG + chr4.1:39034004-39034023 MS.gene08620:CDS 30.0%
TCCAAAGCTTGCAAATTTAA+TGG - chr4.1:39036144-39036163 None:intergenic 30.0%
TCCATTAAATTTGCAAGCTT+TGG + chr4.1:39036140-39036159 MS.gene08620:CDS 30.0%
TCTATGATCATAGGTAACAT+TGG - chr4.1:39031571-39031590 None:intergenic 30.0%
TGAATGGTTCATTATCAGTT+CGG - chr4.1:39032619-39032638 None:intergenic 30.0%
TGACTCAATCAGTATCTAAA+AGG - chr4.1:39035870-39035889 None:intergenic 30.0%
TTAAGGTATATGAGTTTCCA+AGG + chr4.1:39034638-39034657 MS.gene08620:intron 30.0%
TTACTCCCTGAAAAAATTCT+CGG - chr4.1:39034917-39034936 None:intergenic 30.0%
TTAGATTTCTGAATAAGGTC+AGG - chr4.1:39031991-39032010 None:intergenic 30.0%
TTCAAACCTTTCAATACTAC+CGG - chr4.1:39035188-39035207 None:intergenic 30.0%
TTGTAAAATAGCGATTGTTG+TGG + chr4.1:39033611-39033630 MS.gene08620:intron 30.0%
TTTCCAGTTACAAGTGTAAT+AGG - chr4.1:39034980-39034999 None:intergenic 30.0%
! AACTGATAATGAACCATTCA+AGG + chr4.1:39032619-39032638 MS.gene08620:CDS 30.0%
! ACTGACTCATGCAATTATAA+AGG + chr4.1:39035662-39035681 MS.gene08620:CDS 30.0%
! AGGACCTATAATTTTATCTC+AGG + chr4.1:39032712-39032731 MS.gene08620:CDS 30.0%
! ATCACACAGTTTCGTTTTAA+TGG + chr4.1:39033089-39033108 MS.gene08620:intron 30.0%
! GGAAACATTGATAGTCATTA+TGG + chr4.1:39032871-39032890 MS.gene08620:CDS 30.0%
! GGTTTTTAATATGCATCATG+TGG + chr4.1:39035092-39035111 MS.gene08620:intron 30.0%
! GTACCAAAAGATATTTTCGA+GGG - chr4.1:39035978-39035997 None:intergenic 30.0%
! TCTTTGGTTGCATTTTATTC+CGG + chr4.1:39032583-39032602 MS.gene08620:CDS 30.0%
! TGATTGAGACTTATGTTTTC+TGG + chr4.1:39032028-39032047 MS.gene08620:CDS 30.0%
! TGTACCAAAAGATATTTTCG+AGG - chr4.1:39035979-39035998 None:intergenic 30.0%
! TTCCATACTCATTTTCAATC+TGG - chr4.1:39032855-39032874 None:intergenic 30.0%
!! AATGATCATCGATTCAGTAT+AGG - chr4.1:39036322-39036341 None:intergenic 30.0%
!! TACCAAAAGATATTTTCGAG+GGG - chr4.1:39035977-39035996 None:intergenic 30.0%
!!! ATTAAAGCGCATTAGTTTTC+AGG - chr4.1:39035817-39035836 None:intergenic 30.0%
!!! TAATGACGGGTTATGTATTT+TGG + chr4.1:39032332-39032351 MS.gene08620:intron 30.0%
!!! TTGTTTCTCCTTTTGAGTTT+TGG + chr4.1:39035284-39035303 MS.gene08620:intron 30.0%
!!! TTTGTTTTGCTTTGGTTTCT+TGG + chr4.1:39031519-39031538 MS.gene08620:CDS 30.0%
AACACTTACAATGTCTGTGA+TGG - chr4.1:39035728-39035747 None:intergenic 35.0%
AACCATAGGTTTCTTGCATT+TGG + chr4.1:39033412-39033431 MS.gene08620:intron 35.0%
AATATGTTACTGCTTGATGC+AGG + chr4.1:39033957-39033976 MS.gene08620:intron 35.0%
AATTTGTAGGTCTGTCTAGT+GGG + chr4.1:39035360-39035379 MS.gene08620:CDS 35.0%
ACAGAAGAACAATATGAAGG+TGG - chr4.1:39032094-39032113 None:intergenic 35.0%
ACAGAATCAGAAAGAAAGGT+AGG + chr4.1:39036071-39036090 MS.gene08620:CDS 35.0%
ACATACATCTCTTCGAATTC+TGG + chr4.1:39035635-39035654 MS.gene08620:CDS 35.0%
ACATTGGAACAAAAAGAAGC+AGG - chr4.1:39031555-39031574 None:intergenic 35.0%
AGATATTAGACAGCCCAAAT+GGG + chr4.1:39033980-39033999 MS.gene08620:CDS 35.0%
AGATCACCTGATTAGGATAA+GGG - chr4.1:39036118-39036137 None:intergenic 35.0%
AGATGAAATTGTTGGATCAG+TGG - chr4.1:39034060-39034079 None:intergenic 35.0%
ATACGCAATGTTGTCAATCA+CGG - chr4.1:39033675-39033694 None:intergenic 35.0%
ATTACCTTGTACCAAGTCAA+AGG - chr4.1:39035431-39035450 None:intergenic 35.0%
CAACACTCTTGTATTGTTTG+AGG + chr4.1:39035938-39035957 MS.gene08620:CDS 35.0%
CATGTGCTGAATGGAATTAT+GGG + chr4.1:39032454-39032473 MS.gene08620:CDS 35.0%
CCAAATCTTGAGGTAATAAG+AGG + chr4.1:39034086-39034105 MS.gene08620:intron 35.0%
CCCATATATCAGTGTCATAA+TGG - chr4.1:39031781-39031800 None:intergenic 35.0%
CCTCTTATTACCTCAAGATT+TGG - chr4.1:39034089-39034108 None:intergenic 35.0%
CTACAAATCAACCTTTGACT+TGG + chr4.1:39035417-39035436 MS.gene08620:CDS 35.0%
CTGAATCGATGATCATTAAC+AGG + chr4.1:39036325-39036344 MS.gene08620:intron 35.0%
CTGACAAGAAACCAAAAATG+TGG + chr4.1:39033257-39033276 MS.gene08620:CDS 35.0%
CTGATAGAAGTGACTACTTA+TGG + chr4.1:39034609-39034628 MS.gene08620:CDS 35.0%
CTTGTATTGTTTGAGGAAAG+CGG + chr4.1:39035945-39035964 MS.gene08620:CDS 35.0%
GAATTCGAAGAGATGTATGT+TGG - chr4.1:39035635-39035654 None:intergenic 35.0%
GACAATTGTAGACATCAACA+TGG - chr4.1:39033145-39033164 None:intergenic 35.0%
GGAATAAAATGCAACCAAAG+AGG - chr4.1:39032584-39032603 None:intergenic 35.0%
GGATACAGAATCAGAAAGAA+AGG + chr4.1:39036067-39036086 MS.gene08620:CDS 35.0%
GTTATAAGGGTTTAGCTATC+TGG + chr4.1:39033012-39033031 MS.gene08620:intron 35.0%
TACCTATGATCATAGAGCAT+TGG + chr4.1:39031575-39031594 MS.gene08620:CDS 35.0%
TAGTCAGTGTTGTCAAATAG+CGG + chr4.1:39033543-39033562 MS.gene08620:intron 35.0%
TCGATTCAGTATAGGTCAAA+AGG - chr4.1:39036314-39036333 None:intergenic 35.0%
TGCATACCATACTCATCAAT+GGG - chr4.1:39033850-39033869 None:intergenic 35.0%
TGCCAGATTGAAAATGAGTA+TGG + chr4.1:39032850-39032869 MS.gene08620:intron 35.0%
TGGTTCATCACAAAACCTTA+TGG - chr4.1:39033918-39033937 None:intergenic 35.0%
TGTTGTACTCAATACTGCAA+AGG + chr4.1:39034339-39034358 MS.gene08620:CDS 35.0%
TTGCATACCATACTCATCAA+TGG - chr4.1:39033851-39033870 None:intergenic 35.0%
! AGATTTGGTTGGATTTGTGA+AGG + chr4.1:39032383-39032402 MS.gene08620:CDS 35.0%
! ATGGTTTTCCACAATTCTTG+AGG - chr4.1:39035709-39035728 None:intergenic 35.0%
! ATTGTTGATGAAGATACTGC+CGG + chr4.1:39034729-39034748 MS.gene08620:CDS 35.0%
! CAAAAATGTGGACTGAGAAT+TGG + chr4.1:39033269-39033288 MS.gene08620:CDS 35.0%
! CAATTCTCAGTCCACATTTT+TGG - chr4.1:39033271-39033290 None:intergenic 35.0%
! CCCATTTACAAAAGCATGAA+GGG - chr4.1:39034793-39034812 None:intergenic 35.0%
! CCCTTCATGCTTTTGTAAAT+GGG + chr4.1:39034790-39034809 MS.gene08620:CDS 35.0%
! CTTTGGTTGCATTTTATTCC+GGG + chr4.1:39032584-39032603 MS.gene08620:CDS 35.0%
! GAAAAGGTTGATTCTTTGGA+CGG + chr4.1:39034488-39034507 MS.gene08620:CDS 35.0%
! GCTTGGCAGTATAATTTTGA+AGG + chr4.1:39032354-39032373 MS.gene08620:intron 35.0%
! TAAAAAGCTCCATAGTTCTG+TGG - chr4.1:39035137-39035156 None:intergenic 35.0%
! TCCCATTTACAAAAGCATGA+AGG - chr4.1:39034794-39034813 None:intergenic 35.0%
! TTTGGTTTCTTGTCAGAGTT+TGG - chr4.1:39033253-39033272 None:intergenic 35.0%
!! AATACAAGAGTGTTGCTATC+TGG - chr4.1:39035933-39035952 None:intergenic 35.0%
!! ATCTTTAAGATGACCCCATT+TGG - chr4.1:39033997-39034016 None:intergenic 35.0%
!! CAAGTCAAAGGTTGATTTGT+AGG - chr4.1:39035419-39035438 None:intergenic 35.0%
!! CAGTATAATTTTGAAGGCAG+GGG + chr4.1:39032360-39032379 MS.gene08620:intron 35.0%
!! CTCTAAAATAGTACCATGGA+GGG + chr4.1:39033764-39033783 MS.gene08620:intron 35.0%
!! CTTGCTCTAAAATAGTACCA+TGG + chr4.1:39033760-39033779 MS.gene08620:intron 35.0%
!! GCAGTATAATTTTGAAGGCA+GGG + chr4.1:39032359-39032378 MS.gene08620:intron 35.0%
!! GTATTTTTGTGAATGCAGGT+TGG + chr4.1:39035326-39035345 MS.gene08620:intron 35.0%
!! TCTTTAAGATGACCCCATTT+GGG - chr4.1:39033996-39034015 None:intergenic 35.0%
!! TTTATGTAGGTTTTAGCAGC+AGG - chr4.1:39032898-39032917 None:intergenic 35.0%
!!! ATTTTTTCAGGGAGTAAAGC+AGG + chr4.1:39034920-39034939 MS.gene08620:intron 35.0%
AAAGAGGGAAACCACTGTTT+AGG - chr4.1:39032568-39032587 None:intergenic 40.0%
AATCTCTATGCATCACAAGG+AGG + chr4.1:39032692-39032711 MS.gene08620:CDS 40.0%
ACATTTGGAAATCCATGTCG+AGG + chr4.1:39036392-39036411 MS.gene08620:CDS 40.0%
ACTAACTTTGGTCGAACAAC+CGG + chr4.1:39033787-39033806 MS.gene08620:CDS 40.0%
ACTCGAGCAAATAAACACGA+CGG + chr4.1:39034586-39034605 MS.gene08620:CDS 40.0%
ACTTGTGGAAACTACAACCA+CGG + chr4.1:39036176-39036195 MS.gene08620:CDS 40.0%
AGTACAACATTCTTGCAGTC+TGG - chr4.1:39034328-39034347 None:intergenic 40.0%
AGTGCTACGAGGATAATGAA+TGG - chr4.1:39031637-39031656 None:intergenic 40.0%
AGTTCTGTGGCGTGTAAAAT+TGG - chr4.1:39035124-39035143 None:intergenic 40.0%
ATGGAAGAGATCACCTGATT+AGG - chr4.1:39036125-39036144 None:intergenic 40.0%
ATTACCTCAAGATTTGGACC+AGG - chr4.1:39034083-39034102 None:intergenic 40.0%
ATTCATATCACTTGCCTGGA+TGG + chr4.1:39034287-39034306 MS.gene08620:CDS 40.0%
CATAAATTGGGCAGCATCAA+TGG + chr4.1:39032912-39032931 MS.gene08620:CDS 40.0%
CATAGGTTTCTTGCATTTGG+AGG + chr4.1:39033415-39033434 MS.gene08620:intron 40.0%
CATTCAAGGCAGAAATGAAG+CGG + chr4.1:39032633-39032652 MS.gene08620:CDS 40.0%
CCTGATGCTTTCACAAAATC+TGG + chr4.1:39034560-39034579 MS.gene08620:CDS 40.0%
CTCCAAATGCAAGAAACCTA+TGG - chr4.1:39033417-39033436 None:intergenic 40.0%
GAAAAAGGTTAACATGGACG+CGG - chr4.1:39034694-39034713 None:intergenic 40.0%
GAATTTGTAGGTCTGTCTAG+TGG + chr4.1:39035359-39035378 MS.gene08620:CDS 40.0%
GACCAATGCTCTATGATCAT+AGG - chr4.1:39031580-39031599 None:intergenic 40.0%
GACCTACAAATTCACCTTGA+AGG - chr4.1:39035352-39035371 None:intergenic 40.0%
GAGAAAAGACAAGAAACCTG+AGG - chr4.1:39031660-39031679 None:intergenic 40.0%
GAGAATCTCTATGCATCACA+AGG + chr4.1:39032689-39032708 MS.gene08620:CDS 40.0%
GAGATATTAGACAGCCCAAA+TGG + chr4.1:39033979-39033998 MS.gene08620:CDS 40.0%
GAGATCACCTGATTAGGATA+AGG - chr4.1:39036119-39036138 None:intergenic 40.0%
GAGTTTAACAGTGGGATTAC+AGG + chr4.1:39035018-39035037 MS.gene08620:CDS 40.0%
GATATTAGACAGCCCAAATG+GGG + chr4.1:39033981-39034000 MS.gene08620:CDS 40.0%
GATCCAACAATTTCATCTCC+TGG + chr4.1:39034062-39034081 MS.gene08620:CDS 40.0%
GATCTCCTGAGTTTAACAGT+GGG + chr4.1:39035010-39035029 MS.gene08620:CDS 40.0%
GATGCAACGGTAACCTTTAA+TGG + chr4.1:39034262-39034281 MS.gene08620:CDS 40.0%
GCATGTGCTGAATGGAATTA+TGG + chr4.1:39032453-39032472 MS.gene08620:CDS 40.0%
GGATCGAGCAGTTGTAATAT+TGG + chr4.1:39036356-39036375 MS.gene08620:CDS 40.0%
GTAATCCCACTGTTAAACTC+AGG - chr4.1:39035018-39035037 None:intergenic 40.0%
TAAACAGTGGTTTCCCTCTT+TGG + chr4.1:39032567-39032586 MS.gene08620:intron 40.0%
TCACTGACACTTCAGATTGA+AGG + chr4.1:39032180-39032199 MS.gene08620:intron 40.0%
TCAGTTCGGAACTTAATTCC+CGG - chr4.1:39032605-39032624 None:intergenic 40.0%
TCCAAATGCCTCAAGAATTG+TGG + chr4.1:39035698-39035717 MS.gene08620:CDS 40.0%
TGATGCTGCCCAATTTATGT+AGG - chr4.1:39032911-39032930 None:intergenic 40.0%
TTTGGTTGGATTTGTGAAGG+CGG + chr4.1:39032386-39032405 MS.gene08620:CDS 40.0%
TTTGTAAATGGGAAGCTAGC+TGG + chr4.1:39034801-39034820 MS.gene08620:CDS 40.0%
! AGATCTTCCACTGGTCTATA+AGG - chr4.1:39033448-39033467 None:intergenic 40.0%
! ATGTTGTCAATCACGGATTG+TGG - chr4.1:39033668-39033687 None:intergenic 40.0%
! GACCCCTCGAAAATATCTTT+TGG + chr4.1:39035972-39035991 MS.gene08620:CDS 40.0%
! GCCCTTCATGCTTTTGTAAA+TGG + chr4.1:39034789-39034808 MS.gene08620:CDS 40.0%
! GGAGCTTTTTATGACACAGT+GGG + chr4.1:39035146-39035165 MS.gene08620:CDS 40.0%
! TCCACAATTCTTGAGGCATT+TGG - chr4.1:39035702-39035721 None:intergenic 40.0%
! TGGAGCTTTTTATGACACAG+TGG + chr4.1:39035145-39035164 MS.gene08620:CDS 40.0%
! TTTTACACGCCACAGAACTA+TGG + chr4.1:39035125-39035144 MS.gene08620:intron 40.0%
! TTTTTATGACACAGTGGGTG+CGG + chr4.1:39035151-39035170 MS.gene08620:CDS 40.0%
!! AGTTGGATTAGTGAACCTGT+CGG + chr4.1:39034527-39034546 MS.gene08620:CDS 40.0%
!! CATAGAGCATTGGTCATTGA+TGG + chr4.1:39031585-39031604 MS.gene08620:CDS 40.0%
!! GCTCTAAAATAGTACCATGG+AGG + chr4.1:39033763-39033782 MS.gene08620:intron 40.0%
!! GGCAGTATAATTTTGAAGGC+AGG + chr4.1:39032358-39032377 MS.gene08620:intron 40.0%
!! GGCTGTATTTTTGTGAATGC+AGG + chr4.1:39035322-39035341 MS.gene08620:intron 40.0%
!! TCAACCTTTGACTTGGTACA+AGG + chr4.1:39035424-39035443 MS.gene08620:CDS 40.0%
!! TGGACATATCAGGTTAGTCT+CGG + chr4.1:39035242-39035261 MS.gene08620:intron 40.0%
!!! ACGGGTTATGTATTTTGGCT+TGG + chr4.1:39032337-39032356 MS.gene08620:intron 40.0%
!!! CCAGATTTTGTGAAAGCATC+AGG - chr4.1:39034563-39034582 None:intergenic 40.0%
AAACGCAGGGTTCTTATGTC+TGG + chr4.1:39031609-39031628 MS.gene08620:CDS 45.0%
AAATGGGAAGCTAGCTGGTA+AGG + chr4.1:39034806-39034825 MS.gene08620:intron 45.0%
ACCTTTCAATACTACCGGAC+CGG - chr4.1:39035183-39035202 None:intergenic 45.0%
AGGGATTCAATGTGAAGGAC+AGG - chr4.1:39034762-39034781 None:intergenic 45.0%
AGGTGGAAAAGAACAGAACC+TGG - chr4.1:39032077-39032096 None:intergenic 45.0%
ATCTCCTGGTCCAAATCTTG+AGG + chr4.1:39034076-39034095 MS.gene08620:CDS 45.0%
ATGGCTACGTCTCTTGATAC+AGG + chr4.1:39032931-39032950 MS.gene08620:CDS 45.0%
CAGACTGCAGTTTACAAGAC+AGG + chr4.1:39034199-39034218 MS.gene08620:intron 45.0%
CAGGTCTTTATGTGCATCTC+CGG + chr4.1:39032418-39032437 MS.gene08620:CDS 45.0%
CGATCTCCTGAGTTTAACAG+TGG + chr4.1:39035009-39035028 MS.gene08620:CDS 45.0%
CGCTTCATTTCTGCCTTGAA+TGG - chr4.1:39032635-39032654 None:intergenic 45.0%
CGCTTCTTCGCAAAGCTTTA+TGG - chr4.1:39034030-39034049 None:intergenic 45.0%
CGTTGAAATGAAAGGTCCAC+CGG - chr4.1:39033809-39033828 None:intergenic 45.0%
CTCACAGCAATGGACATATC+AGG + chr4.1:39035232-39035251 MS.gene08620:CDS 45.0%
CTCTTTGTTACTCCTCGACA+TGG - chr4.1:39036407-39036426 None:intergenic 45.0%
CTGATATGTCCATTGCTGTG+AGG - chr4.1:39035234-39035253 None:intergenic 45.0%
CTTTATGTGCATCTCCGGAT+CGG + chr4.1:39032423-39032442 MS.gene08620:CDS 45.0%
GACCAAGGGATTCAATGTGA+AGG - chr4.1:39034767-39034786 None:intergenic 45.0%
GATCATTAACAGGCCTGCAT+TGG + chr4.1:39036335-39036354 MS.gene08620:intron 45.0%
GATGCACCCATTGATGAGTA+TGG + chr4.1:39033841-39033860 MS.gene08620:CDS 45.0%
GCAAAAGCAAGATCTTCCAC+TGG - chr4.1:39033457-39033476 None:intergenic 45.0%
GCGGTTTACTGCTAAGATTG+TGG + chr4.1:39032652-39032671 MS.gene08620:CDS 45.0%
GGAAACCACTGTTTAGGCAA+GGG - chr4.1:39032562-39032581 None:intergenic 45.0%
GGAATGCCCTTATCCTAATC+AGG + chr4.1:39036109-39036128 MS.gene08620:CDS 45.0%
GGACCAGGAGATGAAATTGT+TGG - chr4.1:39034068-39034087 None:intergenic 45.0%
GGCAATTCATATCACTTGCC+TGG + chr4.1:39034283-39034302 MS.gene08620:CDS 45.0%
GGCCTTCAAGGTGAATTTGT+AGG + chr4.1:39035347-39035366 MS.gene08620:CDS 45.0%
GGCTCTATCCATTGTGCAAA+AGG + chr4.1:39036217-39036236 MS.gene08620:CDS 45.0%
GTATTGTTTGAGGAAAGCGG+AGG + chr4.1:39035948-39035967 MS.gene08620:CDS 45.0%
GTCCTTCACATTGAATCCCT+TGG + chr4.1:39034762-39034781 MS.gene08620:CDS 45.0%
TACCATGGAGGGACTAACTT+TGG + chr4.1:39033775-39033794 MS.gene08620:CDS 45.0%
TCTGCCTTCATTGCCAACAT+CGG + chr4.1:39034232-39034251 MS.gene08620:CDS 45.0%
TTCCATTCAGCACATGCGTA+TGG - chr4.1:39032450-39032469 None:intergenic 45.0%
TTCTTCCCTTGCCTAAACAG+TGG + chr4.1:39032554-39032573 MS.gene08620:intron 45.0%
! ATGTGGACTGAGAATTGGAG+TGG + chr4.1:39033274-39033293 MS.gene08620:CDS 45.0%
! GTTAGTCTCGGCTTGACTTA+AGG + chr4.1:39035254-39035273 MS.gene08620:intron 45.0%
! GTTCAAGTTCAGGATGGAGT+TGG + chr4.1:39034510-39034529 MS.gene08620:CDS 45.0%
! TCTTTGGACGGTTCAAGTTC+AGG + chr4.1:39034500-39034519 MS.gene08620:CDS 45.0%
! TTTTATGACACAGTGGGTGC+GGG + chr4.1:39035152-39035171 MS.gene08620:CDS 45.0%
!! TTTTGAAGGCAGGGGAGATT+TGG + chr4.1:39032368-39032387 MS.gene08620:CDS 45.0%
!!! TTTATATATTTAAATTTTAG+TGG - chr4.1:39033938-39033957 None:intergenic 5.0%
AAAGGCGAAGCTTGGGTGAA+CGG + chr4.1:39035587-39035606 MS.gene08620:CDS 50.0%
AACTTTGGTCGAACAACCGG+TGG + chr4.1:39033790-39033809 MS.gene08620:CDS 50.0%
AAGATGCTCACAGACCATCC+AGG - chr4.1:39034304-39034323 None:intergenic 50.0%
ACAACTGCTCGATCCAATGC+AGG - chr4.1:39036351-39036370 None:intergenic 50.0%
ACCTGCAGACACGTGGAATT+CGG + chr4.1:39036046-39036065 MS.gene08620:CDS 50.0%
ACGAACTTTGTTGCTCCCTC+CGG + chr4.1:39035527-39035546 MS.gene08620:CDS 50.0%
AGGCAACTACGGAAACGTGA+AGG + chr4.1:39034940-39034959 MS.gene08620:CDS 50.0%
CTAGTGGGAATGTTGGACAG+TGG + chr4.1:39035375-39035394 MS.gene08620:CDS 50.0%
CTCTTGATACAGGTGTTCCC+TGG + chr4.1:39032941-39032960 MS.gene08620:CDS 50.0%
GACAAAGCATAGGGCGATAC+TGG + chr4.1:39035609-39035628 MS.gene08620:CDS 50.0%
GACCAAAGTTAGTCCCTCCA+TGG - chr4.1:39033780-39033799 None:intergenic 50.0%
GATATCATGTACCGCGATCG+TGG + chr4.1:39035901-39035920 MS.gene08620:intron 50.0%
GATGGGAAAAGGCGAAGCTT+GGG + chr4.1:39035580-39035599 MS.gene08620:CDS 50.0%
GATTGCAACCGGGTTACTTC+CGG - chr4.1:39035549-39035568 None:intergenic 50.0%
GCCTGGTTGCACATAATCCA+GGG - chr4.1:39032961-39032980 None:intergenic 50.0%
GGACTGAGAATTGGAGTGGA+TGG + chr4.1:39033278-39033297 MS.gene08620:CDS 50.0%
GGGAAACCACTGTTTAGGCA+AGG - chr4.1:39032563-39032582 None:intergenic 50.0%
GGGAGTAAAGCAGGCAACTA+CGG + chr4.1:39034929-39034948 MS.gene08620:intron 50.0%
GGGTGAACGGACAAAGCATA+GGG + chr4.1:39035600-39035619 MS.gene08620:CDS 50.0%
GGTCTGTCTAGTGGGAATGT+TGG + chr4.1:39035368-39035387 MS.gene08620:CDS 50.0%
GTCCATACGCATGTGCTGAA+TGG + chr4.1:39032445-39032464 MS.gene08620:CDS 50.0%
TAGTTTCCACAAGTCCCACG+AGG - chr4.1:39036170-39036189 None:intergenic 50.0%
TCCCTGGATTATGTGCAACC+AGG + chr4.1:39032957-39032976 MS.gene08620:CDS 50.0%
TCGATCTCTCCTCACAGCAA+TGG + chr4.1:39035222-39035241 MS.gene08620:CDS 50.0%
TCGCGGTACATGATATCTGC+AGG - chr4.1:39035898-39035917 None:intergenic 50.0%
TGCCTGGTTGCACATAATCC+AGG - chr4.1:39032962-39032981 None:intergenic 50.0%
TGCTGTGCCTTATAGACCAG+TGG + chr4.1:39033438-39033457 MS.gene08620:CDS 50.0%
TGGGTGAACGGACAAAGCAT+AGG + chr4.1:39035599-39035618 MS.gene08620:CDS 50.0%
TTATCCTCGTAGCACTCCTC+AGG + chr4.1:39031641-39031660 MS.gene08620:CDS 50.0%
TTGGATCAGGTGCATTTGCC+TGG - chr4.1:39032978-39032997 None:intergenic 50.0%
TTTATGACACAGTGGGTGCG+GGG + chr4.1:39035153-39035172 MS.gene08620:CDS 50.0%
! AAGCATGAAGGGCATGACCA+AGG - chr4.1:39034782-39034801 None:intergenic 50.0%
! ACCGGTCCGGTAGTATTGAA+AGG + chr4.1:39035179-39035198 MS.gene08620:CDS 50.0%
! AGCATGAAGGGCATGACCAA+GGG - chr4.1:39034781-39034800 None:intergenic 50.0%
! GGTCATTGATGGCAAACGCA+GGG + chr4.1:39031596-39031615 MS.gene08620:CDS 50.0%
! TGGACGGTTCAAGTTCAGGA+TGG + chr4.1:39034504-39034523 MS.gene08620:CDS 50.0%
! TGGTCATTGATGGCAAACGC+AGG + chr4.1:39031595-39031614 MS.gene08620:CDS 50.0%
!! TCAGGCGTTGAAATACCGAC+AGG - chr4.1:39034545-39034564 None:intergenic 50.0%
!! TGAATGCAGGTTGGCCTTCA+AGG + chr4.1:39035335-39035354 MS.gene08620:intron 50.0%
!! TTTCTGGAACCTGCACGAAC+CGG + chr4.1:39032044-39032063 MS.gene08620:CDS 50.0%
AACAGAACCTGGCCTCGAAC+CGG - chr4.1:39032066-39032085 None:intergenic 55.0%
CACATGCGTATGGACCGATC+CGG - chr4.1:39032440-39032459 None:intergenic 55.0%
CATCGGCACGTCTGATGCAA+CGG + chr4.1:39034249-39034268 MS.gene08620:CDS 55.0%
CCCGTGAAGTCGATTGCAAC+CGG - chr4.1:39035560-39035579 None:intergenic 55.0%
CCGTGAAGTCGATTGCAACC+GGG - chr4.1:39035559-39035578 None:intergenic 55.0%
CGGAAACGTGAAGGTCAACG+TGG + chr4.1:39034949-39034968 MS.gene08620:CDS 55.0%
CGGAAGCTGCAGCAGCAATA+AGG + chr4.1:39036196-39036215 MS.gene08620:CDS 55.0%
GAATTCCACGTGTCTGCAGG+TGG - chr4.1:39036047-39036066 None:intergenic 55.0%
GACTTCACGGGGATGGGAAA+AGG + chr4.1:39035569-39035588 MS.gene08620:CDS 55.0%
GGATGGGAAAAGGCGAAGCT+TGG + chr4.1:39035579-39035598 MS.gene08620:CDS 55.0%
GGGCATTCCAGTGACAGTAC+AGG - chr4.1:39036098-39036117 None:intergenic 55.0%
GGTAGGTCCTGTACTGTCAC+TGG + chr4.1:39036088-39036107 MS.gene08620:CDS 55.0%
TATTGCTGCTGCAGCTTCCG+TGG - chr4.1:39036196-39036215 None:intergenic 55.0%
TCCGAATTCCACGTGTCTGC+AGG - chr4.1:39036050-39036069 None:intergenic 55.0%
! CCCGGTTGCAATCGACTTCA+CGG + chr4.1:39035556-39035575 MS.gene08620:CDS 55.0%
! CCGCTGAAAAAAGCGCGCAA+CGG - chr4.1:39033479-39033498 None:intergenic 55.0%
! CCGGTTGCAATCGACTTCAC+GGG + chr4.1:39035557-39035576 MS.gene08620:CDS 55.0%
! CGGTTGCAATCGACTTCACG+GGG + chr4.1:39035558-39035577 MS.gene08620:CDS 55.0%
! CGTGCCGATGTTGGCAATGA+AGG - chr4.1:39034239-39034258 None:intergenic 55.0%
! GAAGGCAGGGGAGATTTGGT+TGG + chr4.1:39032372-39032391 MS.gene08620:CDS 55.0%
! GCAATCGACTTCACGGGGAT+GGG + chr4.1:39035563-39035582 MS.gene08620:CDS 55.0%
! GTGAAGGACAGGTTGAGCAC+CGG - chr4.1:39034751-39034770 None:intergenic 55.0%
! TCTGGCTTCAACCACGATCG+CGG - chr4.1:39035915-39035934 None:intergenic 55.0%
! TGCAATCGACTTCACGGGGA+TGG + chr4.1:39035562-39035581 MS.gene08620:CDS 55.0%
! TGCATCAGACGTGCCGATGT+TGG - chr4.1:39034248-39034267 None:intergenic 55.0%
!! CAAGCTTTGGAACGCCTCGT+GGG + chr4.1:39036153-39036172 MS.gene08620:CDS 55.0%
!! GAAACCTGAGGAGTGCTACG+AGG - chr4.1:39031648-39031667 None:intergenic 55.0%
!!! CCGTTGCGCGCTTTTTTCAG+CGG + chr4.1:39033476-39033495 MS.gene08620:CDS 55.0%
!!! CGTTGCGCGCTTTTTTCAGC+GGG + chr4.1:39033477-39033496 MS.gene08620:CDS 55.0%
!!! GTTGCGCGCTTTTTTCAGCG+GGG + chr4.1:39033478-39033497 MS.gene08620:CDS 55.0%
GCAACCGGGTTACTTCCGGA+GGG - chr4.1:39035545-39035564 None:intergenic 60.0%
TCCACGTGTCTGCAGGTGGA+GGG - chr4.1:39036043-39036062 None:intergenic 60.0%
TGCAACCGGGTTACTTCCGG+AGG - chr4.1:39035546-39035565 None:intergenic 60.0%
TGCTCCCTCCGGAAGTAACC+CGG + chr4.1:39035538-39035557 MS.gene08620:CDS 60.0%
TTCCACGTGTCTGCAGGTGG+AGG - chr4.1:39036044-39036063 None:intergenic 60.0%
!! AACCTGCACGAACCGGTTCG+AGG + chr4.1:39032051-39032070 MS.gene08620:CDS 60.0%
!! GCAAGCTTTGGAACGCCTCG+TGG + chr4.1:39036152-39036171 MS.gene08620:CDS 60.0%
ACAGTGGGTGCGGGGATCAC+CGG + chr4.1:39035161-39035180 MS.gene08620:CDS 65.0%
ACCCTCCACCTGCAGACACG+TGG + chr4.1:39036039-39036058 MS.gene08620:CDS 65.0%
GGAACGCCTCGTGGGACTTG+TGG + chr4.1:39036161-39036180 MS.gene08620:CDS 65.0%
GTGAAGGCGGTAGCAGCAGC+AGG + chr4.1:39032399-39032418 MS.gene08620:CDS 65.0%
!!! GCGCGCTTTTTTCAGCGGGG+TGG + chr4.1:39033481-39033500 MS.gene08620:CDS 65.0%
!! GCACGAACCGGTTCGAGGCC+AGG + chr4.1:39032056-39032075 MS.gene08620:CDS 70.0%
!! GGCCTCGAACCGGTTCGTGC+AGG - chr4.1:39032056-39032075 None:intergenic 70.0%
GGGTGCGGGGATCACCGGTC+CGG + chr4.1:39035166-39035185 MS.gene08620:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 39031498 39036454 39031498 ID=MS.gene08620
chr4.1 mRNA 39031498 39036454 39031498 ID=MS.gene08620.t1;Parent=MS.gene08620
chr4.1 exon 39031498 39031662 39031498 ID=MS.gene08620.t1.exon1;Parent=MS.gene08620.t1
chr4.1 CDS 39031498 39031662 39031498 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39031982 39032077 39031982 ID=MS.gene08620.t1.exon2;Parent=MS.gene08620.t1
chr4.1 CDS 39031982 39032077 39031982 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39032363 39032475 39032363 ID=MS.gene08620.t1.exon3;Parent=MS.gene08620.t1
chr4.1 CDS 39032363 39032475 39032363 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39032574 39032733 39032574 ID=MS.gene08620.t1.exon4;Parent=MS.gene08620.t1
chr4.1 CDS 39032574 39032733 39032574 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39032856 39032999 39032856 ID=MS.gene08620.t1.exon5;Parent=MS.gene08620.t1
chr4.1 CDS 39032856 39032999 39032856 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39033211 39033299 39033211 ID=MS.gene08620.t1.exon6;Parent=MS.gene08620.t1
chr4.1 CDS 39033211 39033299 39033211 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39033420 39033525 39033420 ID=MS.gene08620.t1.exon7;Parent=MS.gene08620.t1
chr4.1 CDS 39033420 39033525 39033420 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39033775 39033862 39033775 ID=MS.gene08620.t1.exon8;Parent=MS.gene08620.t1
chr4.1 CDS 39033775 39033862 39033775 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39033979 39034097 39033979 ID=MS.gene08620.t1.exon9;Parent=MS.gene08620.t1
chr4.1 CDS 39033979 39034097 39033979 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39034202 39034360 39034202 ID=MS.gene08620.t1.exon10;Parent=MS.gene08620.t1
chr4.1 CDS 39034202 39034360 39034202 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39034440 39034642 39034440 ID=MS.gene08620.t1.exon11;Parent=MS.gene08620.t1
chr4.1 CDS 39034440 39034642 39034440 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39034728 39034822 39034728 ID=MS.gene08620.t1.exon12;Parent=MS.gene08620.t1
chr4.1 CDS 39034728 39034822 39034728 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39034930 39035039 39034930 ID=MS.gene08620.t1.exon13;Parent=MS.gene08620.t1
chr4.1 CDS 39034930 39035039 39034930 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39035140 39035253 39035140 ID=MS.gene08620.t1.exon14;Parent=MS.gene08620.t1
chr4.1 CDS 39035140 39035253 39035140 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39035344 39035445 39035344 ID=MS.gene08620.t1.exon15;Parent=MS.gene08620.t1
chr4.1 CDS 39035344 39035445 39035344 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39035527 39035738 39035527 ID=MS.gene08620.t1.exon16;Parent=MS.gene08620.t1
chr4.1 CDS 39035527 39035738 39035527 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39035902 39036238 39035902 ID=MS.gene08620.t1.exon17;Parent=MS.gene08620.t1
chr4.1 CDS 39035902 39036238 39035902 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
chr4.1 exon 39036347 39036454 39036347 ID=MS.gene08620.t1.exon18;Parent=MS.gene08620.t1
chr4.1 CDS 39036347 39036454 39036347 ID=cds.MS.gene08620.t1;Parent=MS.gene08620.t1
Gene Sequence

>MS.gene08620

ATGAGAGGGACACAAATTGTGTTTGTTTTGCTTTGGTTTCTTGGTGTTTATGTTCCTGCTTCTTTTTGTTCCAATGTTACCTATGATCATAGAGCATTGGTCATTGATGGCAAACGCAGGGTTCTTATGTCTGGTTCCATTCATTATCCTCGTAGCACTCCTCAGGTTTCTTGTCTTTTCTCTTTATGTGTTTTTTTTTCATATACAATTGTGTAGCACGTAACACTGACACTTCAGATTGAAAATGTGTCATGTGTTTAACATTTGTCCGTGTTATATACCATTATGACACTGATATATGGGATTGCATTTAATGACATTTATTTTTTTTCTTCTAATTATTATTACAATGTTTACGTGTCAGTGTTGTGTTTGATGTATGTGTTTGTGTTTGTGTTTGTGTTTGTGCTTCATAGATATACAGTACTTATTCAATTTGTGTTTGATGTTTGAACTTGTAACAATGGTATATTTGTTATTGTAGATGTGGCCTGACCTTATTCAGAAATCTAAAGATGGGGGAATTGATGTGATTGAGACTTATGTTTTCTGGAACCTGCACGAACCGGTTCGAGGCCAGGTTCTGTTCTTTTCCACCTTCATATTGTTCTTCTGTTTTCTCTTTACTATCTTTTACATTGCATTGTGAGTTTTCAAACTTAAAAGTGTGGAAGATTACGTATCACTGACACTTCAGATTGAAGGCGTGTCCATGTATGTGTATGTACTTCATAGATAGAAGATCATTTAGATATTTATCAGATTGTAATTTTAGAACTTAAAAGCATGAATTTGTGAAGACAAGTTTTCAATTTCTATCAGAAGACATCAAATTAATGACGGGTTATGTATTTTGGCTTGGCAGTATAATTTTGAAGGCAGGGGAGATTTGGTTGGATTTGTGAAGGCGGTAGCAGCAGCAGGTCTTTATGTGCATCTCCGGATCGGTCCATACGCATGTGCTGAATGGAATTATGGGTAAACTTGGATCTTTTCAATGTATCATTTTAAGGGAAGTTTTATAAAAGTATCTAATTCAGTCCTAGTCTTTAATTTTTCTTCCCTTGCCTAAACAGTGGTTTCCCTCTTTGGTTGCATTTTATTCCGGGAATTAAGTTCCGAACTGATAATGAACCATTCAAGGCAGAAATGAAGCGGTTTACTGCTAAGATTGTGGATTTGATGAAGCAAGAGAATCTCTATGCATCACAAGGAGGACCTATAATTTTATCTCAGGTTCTATCATCTTAAAATCATAATAAGTACATGCCAATTTTTCATTATGTTTCTGAAATTATAACTTCTATGTGTGGATGCATAGTTATTTAATGTGAGAATATTTTATTTTTTTATGCCAGATTGAAAATGAGTATGGAAACATTGATAGTCATTATGGGCCTGCTGCTAAAACCTACATAAATTGGGCAGCATCAATGGCTACGTCTCTTGATACAGGTGTTCCCTGGATTATGTGCAACCAGGCAAATGCACCTGATCCAATTGTATGTTTTCTCGTTATAAGGGTTTAGCTATCTGGATTATCATCTTTCTTTTTTTAGTGAAAGGAAAAAGAATAGTTTGCTCTGTGCTTATCACACAGTTTCGTTTTAATGGATTATCTATCTTCACGAGAGAGCTATCTTACCATGTTGATGTCTACAATTGTCCTACTTAATTGTTAATTTTCATAATATCTTATCTTAAATCTTGCAGATTAACACATGCAATAATTTTTATTGTGATCAATTCACACCAAACTCTGACAAGAAACCAAAAATGTGGACTGAGAATTGGAGTGGATGGTCAGTAGCGACCTTCACTATTTAAATCATTTTGTTATTTGAATAGCATACTCAAAAAGTATGATCTGATTTAACTCTTTTTGCCCCTATTGCAACCTTTTGAATTCTTTGAAACCATAGGTTTCTTGCATTTGGAGGTGCTGTGCCTTATAGACCAGTGGAAGATCTTGCTTTTGCCGTTGCGCGCTTTTTTCAGCGGGGTGGAACTTTTCAAAATTACTACATGGTAATTAATCTCACACGTAGTCAGTGTTGTCAAATAGCGGTGCTACAGCTTAGCGAGATTTGAACAAGTTATTTATTACAAATTATTGTAAAATAGCGATTGTTGTGGCTCATAGCTGAACTTGTACAACTGCTATTTTCCACAATCCGTGATTGACAACATTGCGTATAGTTTAAGCTCAAAGTTACTAGGCAAGATAGTAAACCAACTGATATCACAACTATTTTTTCGTTGCTTGCTCTAAAATAGTACCATGGAGGGACTAACTTTGGTCGAACAACCGGTGGACCTTTCATTTCAACGAGTTATGATTATGATGCACCCATTGATGAGTATGGTATGCAATCTTTCGACTTCCATATTTATTTTGAACAATATTATGTACAAGGCCATAAGGTTTTGTGATGAACCACTAAAATTTAAATATATAAAATATGTTACTGCTTGATGCAGGAGATATTAGACAGCCCAAATGGGGTCATCTTAAAGATTTGCACAAGGCCATAAAGCTTTGCGAAGAAGCGTTGATAGCCACTGATCCAACAATTTCATCTCCTGGTCCAAATCTTGAGGTAATAAGAGGCCTTTTAAGTTTTGATCACAATTTTATGTTTCAAGCTATTCAGTTTCATGAATAATTTTGTTATATCTCTTATGATTTACTTTTCAATCTCAGACTGCAGTTTACAAGACAGGAACTGTATGCTCTGCCTTCATTGCCAACATCGGCACGTCTGATGCAACGGTAACCTTTAATGGCAATTCATATCACTTGCCTGGATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTTGTACTCAATACTGCAAAGGTTTGTCGATATCTGTTCTTCTATTTTCTTGTTCAAGAAGTAAGTAGAACATAAACTAAAGTTATTTTTCGTATGACAGGTTAATTCTGCATCTATGATTTCAAGTTTCGCAACTGAATCTTCAAAAGAAAAGGTTGATTCTTTGGACGGTTCAAGTTCAGGATGGAGTTGGATTAGTGAACCTGTCGGTATTTCAACGCCTGATGCTTTCACAAAATCTGGACTACTCGAGCAAATAAACACGACGGCTGATAGAAGTGACTACTTATGGTACTCATTAAGGTATATGAGTTTCCAAGGTTGAGATAGCTTTTTTTAACTAGATTTTCTCCGCGTCCATGTTAACCTTTTTCAATTTGTTTTGAAGCATTGTTGATGAAGATACTGCCGGTGCTCAACCTGTCCTTCACATTGAATCCCTTGGTCATGCCCTTCATGCTTTTGTAAATGGGAAGCTAGCTGGTAAGGAAAAAAAAAGTTAAAACTTGATATTTCTTTCTTAAATGAAGTATTTCATGAATTATGTAATGAATGACATTTCGATATGTTATTTCCGAGAATTTTTTCAGGGAGTAAAGCAGGCAACTACGGAAACGTGAAGGTCAACGTGGATATACCTATTACACTTGTAACTGGAAAGAACACGATCGATCTCCTGAGTTTAACAGTGGGATTACAGGTTCATATTTTCTTATTATACATAATTAAAGCATTTACAACAACAAAATCATGGTTTTTAATATGCATCATGTGGTTAATGCCAATTTTACACGCCACAGAACTATGGAGCTTTTTATGACACAGTGGGTGCGGGGATCACCGGTCCGGTAGTATTGAAAGGTTTGAAAAATGGCAGTAGCGTCGATCTCTCCTCACAGCAATGGACATATCAGGTTAGTCTCGGCTTGACTTAAGGCCTATTTTTGTTTCTCCTTTTGAGTTTTGGTGAATTAATTATATTGGCTGTATTTTTGTGAATGCAGGTTGGCCTTCAAGGTGAATTTGTAGGTCTGTCTAGTGGGAATGTTGGACAGTGGAATTCACAATCAAACTTACCTACAAATCAACCTTTGACTTGGTACAAGGTAATCTTATTAAAATAAAGCGTTCTATTTAAATTCTCAAGTTTTTCTTCAGTAGACTAATGTCGGTACATGTTGTATTAGACGAACTTTGTTGCTCCCTCCGGAAGTAACCCGGTTGCAATCGACTTCACGGGGATGGGAAAAGGCGAAGCTTGGGTGAACGGACAAAGCATAGGGCGATACTGGCCAACATACATCTCTTCGAATTCTGGCTGTACTGACTCATGCAATTATAAAGGAGCATATTCTGCATCCAAATGCCTCAAGAATTGTGGAAAACCATCACAGACATTGTAAGTGTTAGCTATTATATTCTACAGTAAAGAACTTCAAAGTAATTAATTAGTGATATCACTGATATGATCATACCTGAAAACTAATGCGCTTTAATCGTATATACGTAATTGTTGAATAAAGCAGACCTTTTAGATACTGATTGAGTCACTGATCCTGCAGATATCATGTACCGCGATCGTGGTTGAAGCCAGATAGCAACACTCTTGTATTGTTTGAGGAAAGCGGAGGCGACCCCTCGAAAATATCTTTTGGTACAAGACAGATAGAAAGTGTGTGTTCACATGTAACTGAATCTCACCCTCCACCTGCAGACACGTGGAATTCGGATACAGAATCAGAAAGAAAGGTAGGTCCTGTACTGTCACTGGAATGCCCTTATCCTAATCAGGTGATCTCTTCCATTAAATTTGCAAGCTTTGGAACGCCTCGTGGGACTTGTGGAAACTACAACCACGGAAGCTGCAGCAGCAATAAGGCTCTATCCATTGTGCAAAAGGTATTATTATATGAGTTTCATTTTTATACACGACCGATGTTAATGTTTTTACACTGTATGAAGTTTATATTTCCTTTTGACCTATACTGAATCGATGATCATTAACAGGCCTGCATTGGATCGAGCAGTTGTAATATTGGAGTATCAATTAATACATTTGGAAATCCATGTCGAGGAGTAACAAAGAGTTTAGCTGTTGAAGCTGCTTGTACATAG
Protein sequence

>MS.gene08620.t1

MRGTQIVFVLLWFLGVYVPASFCSNVTYDHRALVIDGKRRVLMSGSIHYPRSTPQMWPDLIQKSKDGGIDVIETYVFWNLHEPVRGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMKRFTAKIVDLMKQENLYASQGGPIILSQIENEYGNIDSHYGPAAKTYINWAASMATSLDTGVPWIMCNQANAPDPIINTCNNFYCDQFTPNSDKKPKMWTENWSGWFLAFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGDIRQPKWGHLKDLHKAIKLCEEALIATDPTISSPGPNLETAVYKTGTVCSAFIANIGTSDATVTFNGNSYHLPGWSVSILPDCKNVVLNTAKVNSASMISSFATESSKEKVDSLDGSSSGWSWISEPVGISTPDAFTKSGLLEQINTTADRSDYLWYSLSIVDEDTAGAQPVLHIESLGHALHAFVNGKLAGSKAGNYGNVKVNVDIPITLVTGKNTIDLLSLTVGLQNYGAFYDTVGAGITGPVVLKGLKNGSSVDLSSQQWTYQVGLQGEFVGLSSGNVGQWNSQSNLPTNQPLTWYKTNFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYISSNSGCTDSCNYKGAYSASKCLKNCGKPSQTLYHVPRSWLKPDSNTLVLFEESGGDPSKISFGTRQIESVCSHVTESHPPPADTWNSDTESERKVGPVLSLECPYPNQVISSIKFASFGTPRGTCGNYNHGSCSSNKALSIVQKACIGSSSCNIGVSINTFGNPCRGVTKSLAVEAACT