Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08751.t1 | XP_003606365.1 | 99.2 | 258 | 2 | 0 | 1 | 258 | 1 | 258 | 2.70E-139 | 504.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08751.t1 | A2RVK7 | 73.5 | 257 | 66 | 2 | 1 | 256 | 1 | 256 | 1.7e-105 | 383.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08751.t1 | G7JND2 | 99.2 | 258 | 2 | 0 | 1 | 258 | 1 | 258 | 2.0e-139 | 504.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025936 | MS.gene08751 | PPI |
| MS.gene024471 | MS.gene08751 | PPI |
| MS.gene08751 | MS.gene22822 | PPI |
| MS.gene050621 | MS.gene08751 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08751.t1 | MTR_4g058720 | 99.225 | 258 | 2 | 0 | 1 | 258 | 1 | 258 | 0.0 | 531 |
| MS.gene08751.t1 | MTR_7g116920 | 32.432 | 222 | 145 | 3 | 33 | 249 | 10 | 231 | 2.84e-30 | 113 |
| MS.gene08751.t1 | MTR_7g116920 | 32.683 | 205 | 133 | 3 | 50 | 249 | 9 | 213 | 6.01e-28 | 107 |
| MS.gene08751.t1 | MTR_7g076910 | 33.333 | 162 | 100 | 3 | 33 | 192 | 5 | 160 | 5.81e-18 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08751.t1 | AT4G27490 | 73.541 | 257 | 66 | 2 | 1 | 256 | 1 | 256 | 1.70e-143 | 402 |
| MS.gene08751.t1 | AT4G27490 | 73.541 | 257 | 66 | 2 | 1 | 256 | 1 | 256 | 1.70e-143 | 402 |
| MS.gene08751.t1 | AT4G27490 | 73.541 | 257 | 66 | 2 | 1 | 256 | 1 | 256 | 1.70e-143 | 402 |
| MS.gene08751.t1 | AT4G27490 | 77.358 | 212 | 47 | 1 | 45 | 256 | 4 | 214 | 1.06e-123 | 351 |
| MS.gene08751.t1 | AT4G27490 | 71.658 | 187 | 52 | 1 | 1 | 186 | 1 | 187 | 2.59e-96 | 281 |
| MS.gene08751.t1 | AT4G27490 | 71.658 | 187 | 52 | 1 | 1 | 186 | 1 | 187 | 2.59e-96 | 281 |
| MS.gene08751.t1 | AT4G27490 | 71.658 | 187 | 52 | 1 | 1 | 186 | 1 | 187 | 2.59e-96 | 281 |
| MS.gene08751.t1 | AT3G61620 | 31.532 | 222 | 147 | 3 | 33 | 249 | 10 | 231 | 1.04e-28 | 109 |
| MS.gene08751.t1 | AT3G61620 | 31.532 | 222 | 147 | 3 | 33 | 249 | 10 | 231 | 1.04e-28 | 109 |
| MS.gene08751.t1 | AT3G46210 | 34.356 | 163 | 97 | 5 | 33 | 192 | 5 | 160 | 7.88e-17 | 77.8 |
| MS.gene08751.t1 | AT3G46210 | 34.356 | 163 | 97 | 5 | 33 | 192 | 5 | 160 | 7.88e-17 | 77.8 |
| MS.gene08751.t1 | AT3G46210 | 34.356 | 163 | 97 | 5 | 33 | 192 | 5 | 160 | 7.88e-17 | 77.8 |
| MS.gene08751.t1 | AT3G46210 | 34.356 | 163 | 97 | 5 | 33 | 192 | 5 | 160 | 7.88e-17 | 77.8 |
| MS.gene08751.t1 | AT3G46210 | 34.356 | 163 | 97 | 5 | 33 | 192 | 5 | 160 | 7.88e-17 | 77.8 |
| MS.gene08751.t1 | AT3G46210 | 34.356 | 163 | 97 | 5 | 33 | 192 | 5 | 160 | 7.88e-17 | 77.8 |
| MS.gene08751.t1 | AT3G46210 | 34.356 | 163 | 97 | 5 | 33 | 192 | 5 | 160 | 7.88e-17 | 77.8 |
Find 68 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCTCTGACAACCGGTAAA+AGG | 0.268716 | 4.2:-44750993 | MS.gene08751:CDS |
| GGCAGACCTCATTAATCTTT+GGG | 0.284021 | 4.2:+44747471 | None:intergenic |
| AGGCAGACCTCATTAATCTT+TGG | 0.302096 | 4.2:+44747470 | None:intergenic |
| TTTGGAGGGTGCAATAATAT+TGG | 0.333785 | 4.2:-44749535 | MS.gene08751:CDS |
| ATTGCCTTCTTGCTCTCTCT+TGG | 0.344667 | 4.2:+44749764 | None:intergenic |
| GGATCTGCCTATGCTGAGTT+TGG | 0.377637 | 4.2:-44749926 | MS.gene08751:CDS |
| TTCCATGCTTCATAAAGCTT+TGG | 0.379648 | 4.2:-44749553 | MS.gene08751:CDS |
| GAAACCACGGCCATCGGGTC+GGG | 0.381446 | 4.2:+44750939 | None:intergenic |
| AAAACATCCACAGTGGTCTT+GGG | 0.383967 | 4.2:+44749504 | None:intergenic |
| ATCACCCAACTGACAGTTAC+CGG | 0.402501 | 4.2:-44747506 | MS.gene08751:CDS |
| CGTCATTGATCCTATATTTG+AGG | 0.429457 | 4.2:-44747585 | MS.gene08751:CDS |
| TAATATACCTGTCCACGAAC+TGG | 0.433563 | 4.2:+44749683 | None:intergenic |
| GGTGCTGTGAATGCTGCATC+AGG | 0.440274 | 4.2:-44749947 | MS.gene08751:CDS |
| GCAGGGGATGCAGCTGTGCT+TGG | 0.440538 | 4.2:-44747015 | MS.gene08751:intron |
| CTAGCAACCGATATGACAAC+TGG | 0.441517 | 4.2:+44748182 | None:intergenic |
| CATGCTTCATAAAGCTTTGG+AGG | 0.443233 | 4.2:-44749550 | MS.gene08751:CDS |
| TGCTTCTCAAGGAAGAAGAT+TGG | 0.451632 | 4.2:-44750963 | MS.gene08751:CDS |
| TTCAACTCCAGTTCGTGGAC+AGG | 0.462754 | 4.2:-44749690 | MS.gene08751:intron |
| TACTCACCGTCTCTGACAAC+CGG | 0.464034 | 4.2:-44751000 | MS.gene08751:CDS |
| ATCGGTTGCTAGTCTTGCCT+TGG | 0.469618 | 4.2:-44748171 | MS.gene08751:CDS |
| GCAATGATGTACAGTGATAC+AGG | 0.476158 | 4.2:-44749746 | MS.gene08751:CDS |
| CAAAGCTTGCTAAGATTATG+AGG | 0.489962 | 4.2:-44746983 | MS.gene08751:CDS |
| TGGACCCGACCCGATGGCCG+TGG | 0.491907 | 4.2:-44750943 | MS.gene08751:CDS |
| TAATCATTAAGCTTCCATCT+TGG | 0.496219 | 4.2:+44747552 | None:intergenic |
| CTGGTGGAAACCACGGCCAT+CGG | 0.497666 | 4.2:+44750933 | None:intergenic |
| GGAAACCACGGCCATCGGGT+CGG | 0.497786 | 4.2:+44750938 | None:intergenic |
| TGGTGGAAACCACGGCCATC+GGG | 0.498963 | 4.2:+44750934 | None:intergenic |
| GCATGGAACTGTACTCTTTG+TGG | 0.499282 | 4.2:+44749568 | None:intergenic |
| TGATCTCCCAGTTGTCATAT+CGG | 0.507012 | 4.2:-44748189 | MS.gene08751:CDS |
| TTGGGAATGGCCGGCAAAAG+TGG | 0.509771 | 4.2:-44751039 | None:intergenic |
| TTCGCCGGTAACTGTCAGTT+GGG | 0.515084 | 4.2:+44747502 | None:intergenic |
| CCGCCGTCGTTGGGAATGGC+CGG | 0.519660 | 4.2:-44751048 | None:intergenic |
| AAGGTCATACATCAGTATTC+CGG | 0.520451 | 4.2:+44748142 | None:intergenic |
| TCACACAGATACAATGACTT+TGG | 0.523678 | 4.2:+44749898 | None:intergenic |
| AGTCTTGCCTTGGCAGATGC+CGG | 0.528894 | 4.2:-44748161 | MS.gene08751:CDS |
| CTCCAAAGCTTTATGAAGCA+TGG | 0.529663 | 4.2:+44749551 | None:intergenic |
| TAATGATTCCAGTCATGTCT+CGG | 0.530033 | 4.2:-44747617 | MS.gene08751:intron |
| CTTTGGGGTGGACCATTCGC+CGG | 0.530416 | 4.2:+44747487 | None:intergenic |
| GAGGAGGAAAACTGCCAAGA+TGG | 0.537446 | 4.2:-44747566 | MS.gene08751:CDS |
| AGAATCTGCTTCTGATGCAC+AGG | 0.537718 | 4.2:-44746949 | MS.gene08751:CDS |
| ATTCGCCGGTAACTGTCAGT+TGG | 0.542035 | 4.2:+44747501 | None:intergenic |
| TCTTCTTCCTTGAGAAGCAG+TGG | 0.551293 | 4.2:+44750967 | None:intergenic |
| GACCTCATTAATCTTTGGGG+TGG | 0.565409 | 4.2:+44747475 | None:intergenic |
| CGGCAAAAGTGGAACGACTC+CGG | 0.565948 | 4.2:-44751028 | MS.gene08751:CDS |
| GAAGATTGGACCCGACCCGA+TGG | 0.573254 | 4.2:-44750949 | MS.gene08751:CDS |
| AAGGAAACCACTGCTTCTCA+AGG | 0.573485 | 4.2:-44750974 | MS.gene08751:CDS |
| AAACATCCACAGTGGTCTTG+GGG | 0.573612 | 4.2:+44749505 | None:intergenic |
| ATGCTTCATAAAGCTTTGGA+GGG | 0.574268 | 4.2:-44749549 | MS.gene08751:CDS |
| GGTATTTCCAAACTCAGCAT+AGG | 0.578249 | 4.2:+44749919 | None:intergenic |
| GTCTACACTGGTGGAAACCA+CGG | 0.581502 | 4.2:+44750926 | None:intergenic |
| GCTTACAAGCGGGTCTACAC+TGG | 0.581722 | 4.2:+44750914 | None:intergenic |
| CAGTATTCCGGCATCTGCCA+AGG | 0.585424 | 4.2:+44748154 | None:intergenic |
| TACAAGCGGGTCTACACTGG+TGG | 0.590371 | 4.2:+44750917 | None:intergenic |
| CCTTGTCGCCTCAGTTTCAG+TGG | 0.591419 | 4.2:-44748123 | MS.gene08751:intron |
| AATTCATACCACTGAAACTG+AGG | 0.596309 | 4.2:+44748115 | None:intergenic |
| AGCTGACATTGCAATTCAGA+CGG | 0.603893 | 4.2:+44749723 | None:intergenic |
| AACTGACAGTTACCGGCGAA+TGG | 0.609296 | 4.2:-44747499 | MS.gene08751:CDS |
| CATTGATCCTATATTTGAGG+AGG | 0.611322 | 4.2:-44747582 | MS.gene08751:CDS |
| CCACTGAAACTGAGGCGACA+AGG | 0.615029 | 4.2:+44748123 | None:intergenic |
| GCAGACCTCATTAATCTTTG+GGG | 0.622228 | 4.2:+44747472 | None:intergenic |
| GTCCACCCCAAAGATTAATG+AGG | 0.632706 | 4.2:-44747477 | MS.gene08751:intron |
| TGGGTGATTTCATAGCGAGA+AGG | 0.637919 | 4.2:+44747521 | None:intergenic |
| AGAGACGGTGAGTATGTCGC+CGG | 0.644092 | 4.2:+44751009 | None:intergenic |
| TGGGCCAAGAGAGAGCAAGA+AGG | 0.650542 | 4.2:-44749768 | MS.gene08751:CDS |
| GCATTGGTGCTGGAATCTAG+TGG | 0.655397 | 4.2:-44749480 | MS.gene08751:CDS |
| CAAATATAGGATCAATGACG+AGG | 0.670852 | 4.2:+44747588 | None:intergenic |
| TAGCAACCGATATGACAACT+GGG | 0.691620 | 4.2:+44748183 | None:intergenic |
| TTCATTCCCCAAGACCACTG+TGG | 0.717363 | 4.2:-44749511 | MS.gene08751:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATATTAAAAAAAAT+TGG | + | chr4.2:44750529-44750548 | None:intergenic | 0.0% |
| !! | AATTTAACTAAATGAAAATA+TGG | + | chr4.2:44748748-44748767 | None:intergenic | 10.0% |
| !!! | ATCAAATTTTGTTTATATTA+TGG | - | chr4.2:44747364-44747383 | MS.gene08751:intron | 10.0% |
| !!! | ATTTTATCATTATTATTCTT+CGG | - | chr4.2:44747117-44747136 | MS.gene08751:intron | 10.0% |
| !!! | TCAAATTTTGTTTATATTAT+GGG | - | chr4.2:44747365-44747384 | MS.gene08751:intron | 10.0% |
| !!! | TTTTTTTTTTTTGAATAACA+AGG | - | chr4.2:44750673-44750692 | MS.gene08751:intron | 10.0% |
| !! | AATAAAAAAAATCAATCAGT+CGG | - | chr4.2:44750620-44750639 | MS.gene08751:intron | 15.0% |
| !! | ATATATGAAGTAATTTAAAG+AGG | + | chr4.2:44750028-44750047 | None:intergenic | 15.0% |
| !! | CTTCAAAATATTAAGTATTA+CGG | + | chr4.2:44750719-44750738 | None:intergenic | 15.0% |
| !! | GTAAATTAAAAACTTGAAAT+AGG | + | chr4.2:44750563-44750582 | None:intergenic | 15.0% |
| !! | TAACTTAATTTATATAGCAA+AGG | + | chr4.2:44749527-44749546 | None:intergenic | 15.0% |
| !! | TTCAAGAATAGTTTAAAAAT+GGG | + | chr4.2:44749928-44749947 | None:intergenic | 15.0% |
| !! | TTTCAAGAATAGTTTAAAAA+TGG | + | chr4.2:44749929-44749948 | None:intergenic | 15.0% |
| !!! | AAATTTTAAGGATTAAAATG+TGG | - | chr4.2:44748582-44748601 | MS.gene08751:intron | 15.0% |
| !!! | ATCATTTTGTAGATTTTTAT+GGG | - | chr4.2:44749499-44749518 | MS.gene08751:CDS | 15.0% |
| !!! | CAATTTACTTTATTTTATTG+CGG | + | chr4.2:44750873-44750892 | None:intergenic | 15.0% |
| !!! | TTTGCTATATAAATTAAGTT+AGG | - | chr4.2:44749526-44749545 | MS.gene08751:CDS | 15.0% |
| !! | AAAATAACCAAGATATGATA+AGG | + | chr4.2:44748339-44748358 | None:intergenic | 20.0% |
| !! | AATATCTTATATCTCAAGTT+AGG | - | chr4.2:44748370-44748389 | MS.gene08751:intron | 20.0% |
| !! | ATAACCTTAAAAAAAGACAA+TGG | - | chr4.2:44747639-44747658 | MS.gene08751:intron | 20.0% |
| !! | ATATCTTATATCTCAAGTTA+GGG | - | chr4.2:44748371-44748390 | MS.gene08751:intron | 20.0% |
| !! | ATCATGCAAAAATATTTCTT+TGG | - | chr4.2:44749602-44749621 | MS.gene08751:intron | 20.0% |
| !! | ATTAAAAAAAATTGGAGAAC+AGG | + | chr4.2:44750521-44750540 | None:intergenic | 20.0% |
| !! | ATTTAGTTAAATTAGTCATG+AGG | - | chr4.2:44748755-44748774 | MS.gene08751:intron | 20.0% |
| !! | TAAATTATTATCACTGTCTA+CGG | - | chr4.2:44747918-44747937 | MS.gene08751:intron | 20.0% |
| !! | TATAGTTGAATTACTATCAT+AGG | - | chr4.2:44748928-44748947 | MS.gene08751:intron | 20.0% |
| !!! | ATCCATTTTTGCTTATATTT+TGG | + | chr4.2:44747291-44747310 | None:intergenic | 20.0% |
| !!! | ATTTTACAAAACAGAAATCT+TGG | + | chr4.2:44748973-44748992 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTATATTATGGGA+CGG | - | chr4.2:44747369-44747388 | MS.gene08751:intron | 20.0% |
| !!! | CATCATTTTGTAGATTTTTA+TGG | - | chr4.2:44749498-44749517 | MS.gene08751:CDS | 20.0% |
| !!! | TCCATTTTTGCTTATATTTT+GGG | + | chr4.2:44747290-44747309 | None:intergenic | 20.0% |
| !!! | TTATTTTCTCCCAAATTTTA+GGG | + | chr4.2:44749346-44749365 | None:intergenic | 20.0% |
| ! | AAATTATTATCACTGTCTAC+GGG | - | chr4.2:44747919-44747938 | MS.gene08751:intron | 25.0% |
| ! | AACATAACATTACCCTTAAA+AGG | - | chr4.2:44747600-44747619 | MS.gene08751:CDS | 25.0% |
| ! | AAGAATAGTTTAAAAATGGG+AGG | + | chr4.2:44749925-44749944 | None:intergenic | 25.0% |
| ! | AAGATTATTTCAAGACTTGT+TGG | - | chr4.2:44748866-44748885 | MS.gene08751:intron | 25.0% |
| ! | AAGGATCATATTCAATATTG+TGG | - | chr4.2:44749657-44749676 | MS.gene08751:intron | 25.0% |
| ! | ACATAACATTACCCTTAAAA+GGG | - | chr4.2:44747601-44747620 | MS.gene08751:CDS | 25.0% |
| ! | ACCTATAAAAAGAACACATT+AGG | + | chr4.2:44748179-44748198 | None:intergenic | 25.0% |
| ! | ATCAACCAATAAAAATGACA+AGG | + | chr4.2:44750141-44750160 | None:intergenic | 25.0% |
| ! | ATCATATTCAATATTGTGGA+GGG | - | chr4.2:44749661-44749680 | MS.gene08751:intron | 25.0% |
| ! | CATTTGTCAGTATTAGATAT+TGG | + | chr4.2:44747870-44747889 | None:intergenic | 25.0% |
| ! | GTGATTGCAAAATAAAACAT+TGG | + | chr4.2:44749995-44750014 | None:intergenic | 25.0% |
| ! | TAATATATCCTGTATGTACT+TGG | + | chr4.2:44749429-44749448 | None:intergenic | 25.0% |
| ! | TAATTGTAGAAAATAAGCAG+TGG | - | chr4.2:44749632-44749651 | MS.gene08751:intron | 25.0% |
| ! | TCCCAAAATATAAGCAAAAA+TGG | - | chr4.2:44747286-44747305 | MS.gene08751:intron | 25.0% |
| ! | TCTTGAAATAATCTTCACTA+AGG | + | chr4.2:44748861-44748880 | None:intergenic | 25.0% |
| ! | TCTTTAACTATTAAGCAAGA+CGG | + | chr4.2:44747484-44747503 | None:intergenic | 25.0% |
| ! | TTACAAATATCTAGATACCA+AGG | + | chr4.2:44750832-44750851 | None:intergenic | 25.0% |
| ! | TTTATTATTGAATTTGTCGC+AGG | - | chr4.2:44749756-44749775 | MS.gene08751:CDS | 25.0% |
| ! | TTTCGTTATCCCTAAAATTT+GGG | - | chr4.2:44749334-44749353 | MS.gene08751:intron | 25.0% |
| ! | TTTCTGGATTTATTAATGCT+AGG | - | chr4.2:44750162-44750181 | MS.gene08751:intron | 25.0% |
| !! | AATGGATTCACATAAGTATT+TGG | - | chr4.2:44747304-44747323 | MS.gene08751:intron | 25.0% |
| !! | ATGTGTTCTTTTTATAGGTT+TGG | - | chr4.2:44748180-44748199 | MS.gene08751:CDS | 25.0% |
| !! | TAACAAGGCTTTTTGAATTA+TGG | - | chr4.2:44750688-44750707 | MS.gene08751:intron | 25.0% |
| !! | TGGATAGGTTAGAAATTTTA+AGG | - | chr4.2:44748570-44748589 | MS.gene08751:intron | 25.0% |
| !! | TGTGTTCTTTTTATAGGTTT+GGG | - | chr4.2:44748181-44748200 | MS.gene08751:CDS | 25.0% |
| !!! | AGTTTTTTAGATAGTTTGAC+TGG | - | chr4.2:44749268-44749287 | MS.gene08751:intron | 25.0% |
| !!! | ATTTCGTGTTTTTAGTTTTC+AGG | - | chr4.2:44747995-44748014 | MS.gene08751:intron | 25.0% |
| !!! | CTGTTTTTTTATTTATTCCG+TGG | - | chr4.2:44750083-44750102 | MS.gene08751:intron | 25.0% |
| !!! | GTTATTTTCTCCCAAATTTT+AGG | + | chr4.2:44749347-44749366 | None:intergenic | 25.0% |
| !!! | TAGACCATTGTCTTTTTTTA+AGG | + | chr4.2:44747646-44747665 | None:intergenic | 25.0% |
| !!! | TCAAGTTTTTAATTTACCTC+AGG | - | chr4.2:44750566-44750585 | MS.gene08751:intron | 25.0% |
| !!! | TGTTGTTTTGTTTAAAACCT+TGG | - | chr4.2:44750812-44750831 | MS.gene08751:intron | 25.0% |
| !!! | TGTTTTAAGTTAGTCCTTTT+TGG | - | chr4.2:44749195-44749214 | MS.gene08751:intron | 25.0% |
| !!! | TTTTTAGTGTTTGCAAATAG+TGG | + | chr4.2:44747421-44747440 | None:intergenic | 25.0% |
| !!! | TTTTTATTGGTTGATCTTTC+TGG | - | chr4.2:44750146-44750165 | MS.gene08751:intron | 25.0% |
| !!! | TTTTTGCTTATATTTTGGGA+CGG | + | chr4.2:44747286-44747305 | None:intergenic | 25.0% |
| AAACAAAACAACAGCAATCA+AGG | + | chr4.2:44750805-44750824 | None:intergenic | 30.0% | |
| ACAGTTTAACAAGCATTTCA+AGG | + | chr4.2:44750067-44750086 | None:intergenic | 30.0% | |
| ACTCACCTAGAATAAAATGA+AGG | - | chr4.2:44748814-44748833 | MS.gene08751:intron | 30.0% | |
| AGACAATGGTCTAATGAAAA+AGG | - | chr4.2:44747653-44747672 | MS.gene08751:intron | 30.0% | |
| CAATGCACAACAAATATAGA+TGG | - | chr4.2:44750896-44750915 | MS.gene08751:intron | 30.0% | |
| CTCACCTAGAATAAAATGAA+GGG | - | chr4.2:44748815-44748834 | MS.gene08751:intron | 30.0% | |
| CTTTCGTTATCCCTAAAATT+TGG | - | chr4.2:44749333-44749352 | MS.gene08751:intron | 30.0% | |
| GACAAAATGAGATTATCACA+AGG | - | chr4.2:44750207-44750226 | MS.gene08751:intron | 30.0% | |
| GAGTTCATAGATGATTACTT+AGG | - | chr4.2:44747145-44747164 | MS.gene08751:intron | 30.0% | |
| GATCATATTCAATATTGTGG+AGG | - | chr4.2:44749660-44749679 | MS.gene08751:intron | 30.0% | |
| GATCCATAGTATAGATTATG+TGG | - | chr4.2:44749107-44749126 | MS.gene08751:intron | 30.0% | |
| GCAATTACCAGATAAAAACA+CGG | + | chr4.2:44748670-44748689 | None:intergenic | 30.0% | |
| GTCTAATGAAAAAGGATTTG+AGG | - | chr4.2:44747661-44747680 | MS.gene08751:intron | 30.0% | |
| TAATCATTAAGCTTCCATCT+TGG | + | chr4.2:44750419-44750438 | None:intergenic | 30.0% | |
| TAGTTAAAGACCCTAAAGTA+CGG | - | chr4.2:44747494-44747513 | MS.gene08751:CDS | 30.0% | |
| TCACCTAGAATAAAATGAAG+GGG | - | chr4.2:44748816-44748835 | MS.gene08751:intron | 30.0% | |
| TCAGTATTAGATATTGGACA+CGG | + | chr4.2:44747864-44747883 | None:intergenic | 30.0% | |
| TGAAAGACTATTATAGGAAG+AGG | - | chr4.2:44749056-44749075 | MS.gene08751:intron | 30.0% | |
| TTAGTGTATTCCAAGTTGTA+AGG | - | chr4.2:44749025-44749044 | MS.gene08751:intron | 30.0% | |
| TTGAACATCAGTTGTTGAAA+GGG | + | chr4.2:44749371-44749390 | None:intergenic | 30.0% | |
| TTGTGTGATATAAGTCTAGT+TGG | - | chr4.2:44749558-44749577 | MS.gene08751:CDS | 30.0% | |
| TTTGAACATCAGTTGTTGAA+AGG | + | chr4.2:44749372-44749391 | None:intergenic | 30.0% | |
| TTTGACTCCTTATCATATCT+TGG | - | chr4.2:44748329-44748348 | MS.gene08751:intron | 30.0% | |
| ! | GCCTAATGTGTTCTTTTTAT+AGG | - | chr4.2:44748175-44748194 | MS.gene08751:CDS | 30.0% |
| ! | GTCAATTCTAACCCTTTTAA+GGG | + | chr4.2:44747615-44747634 | None:intergenic | 30.0% |
| ! | TTTTATTGCTCCGTACTTTA+GGG | + | chr4.2:44747507-44747526 | None:intergenic | 30.0% |
| !! | AATTTGTGCCTTGGTTTTTA+GGG | - | chr4.2:44749899-44749918 | MS.gene08751:intron | 30.0% |
| !! | CACGGTTTTTCAATATGAAT+TGG | + | chr4.2:44747846-44747865 | None:intergenic | 30.0% |
| !! | CATAGTCATATTGCTTTTGA+TGG | - | chr4.2:44748550-44748569 | MS.gene08751:intron | 30.0% |
| !! | TAATTTGTGCCTTGGTTTTT+AGG | - | chr4.2:44749898-44749917 | MS.gene08751:intron | 30.0% |
| !! | TCATATTGCTTTTGATGGAT+AGG | - | chr4.2:44748555-44748574 | MS.gene08751:intron | 30.0% |
| !! | TTGTTTACCGTGTTTTTATC+TGG | - | chr4.2:44748660-44748679 | MS.gene08751:intron | 30.0% |
| !!! | TTTGGCCTTGTCATTTTTAT+TGG | - | chr4.2:44750133-44750152 | MS.gene08751:intron | 30.0% |
| AACAAGCATTTCAAGGCTAT+GGG | + | chr4.2:44750060-44750079 | None:intergenic | 35.0% | |
| AAGGTCATACATCAGTATTC+CGG | + | chr4.2:44749829-44749848 | None:intergenic | 35.0% | |
| AATTCATACCACTGAAACTG+AGG | + | chr4.2:44749856-44749875 | None:intergenic | 35.0% | |
| AGATATAGCCAAGTACATAC+AGG | - | chr4.2:44749418-44749437 | MS.gene08751:intron | 35.0% | |
| ATAGACTTCTTGCACCAAAA+AGG | + | chr4.2:44749212-44749231 | None:intergenic | 35.0% | |
| ATTGCAATAATCCCCTTCTA+GGG | - | chr4.2:44749154-44749173 | MS.gene08751:intron | 35.0% | |
| CAAATATAGGATCAATGACG+AGG | + | chr4.2:44750383-44750402 | None:intergenic | 35.0% | |
| CACCTAGAATAAAATGAAGG+GGG | - | chr4.2:44748817-44748836 | MS.gene08751:intron | 35.0% | |
| CATTGATCCTATATTTGAGG+AGG | - | chr4.2:44750386-44750405 | MS.gene08751:intron | 35.0% | |
| CGTCATTGATCCTATATTTG+AGG | - | chr4.2:44750383-44750402 | MS.gene08751:intron | 35.0% | |
| CTGCCACATAATCTATACTA+TGG | + | chr4.2:44749113-44749132 | None:intergenic | 35.0% | |
| GTACTTGGCTATATCTTTCA+AGG | + | chr4.2:44749414-44749433 | None:intergenic | 35.0% | |
| TAACAAGCATTTCAAGGCTA+TGG | + | chr4.2:44750061-44750080 | None:intergenic | 35.0% | |
| TAATGATTCCAGTCATGTCT+CGG | - | chr4.2:44750351-44750370 | MS.gene08751:intron | 35.0% | |
| TAGAAAATAAGCAGTGGTGA+AGG | - | chr4.2:44749638-44749657 | MS.gene08751:intron | 35.0% | |
| TCACACAGATACAATGACTT+TGG | + | chr4.2:44748073-44748092 | None:intergenic | 35.0% | |
| TGAACATCAGTTGTTGAAAG+GGG | + | chr4.2:44749370-44749389 | None:intergenic | 35.0% | |
| TGTCTCTATGTTGTCAAGAT+CGG | + | chr4.2:44747788-44747807 | None:intergenic | 35.0% | |
| TGTTTATATTATGGGACGGA+GGG | - | chr4.2:44747373-44747392 | MS.gene08751:intron | 35.0% | |
| TTCCATGCTTCATAAAGCTT+TGG | - | chr4.2:44748415-44748434 | MS.gene08751:intron | 35.0% | |
| TTGTTTATATTATGGGACGG+AGG | - | chr4.2:44747372-44747391 | MS.gene08751:intron | 35.0% | |
| TTTCAAGGAATCCTTGTGTT+AGG | + | chr4.2:44749399-44749418 | None:intergenic | 35.0% | |
| TTTGCAAATAGTGGCTATTC+CGG | + | chr4.2:44747412-44747431 | None:intergenic | 35.0% | |
| ! | AACCCCCTTCATTTTATTCT+AGG | + | chr4.2:44748822-44748841 | None:intergenic | 35.0% |
| ! | ATTCTCTGTAATTTGTGCCT+TGG | - | chr4.2:44749890-44749909 | MS.gene08751:intron | 35.0% |
| ! | CAGTTTTCCTCCTCAAATAT+AGG | + | chr4.2:44750396-44750415 | None:intergenic | 35.0% |
| ! | CGTCAATTCTAACCCTTTTA+AGG | + | chr4.2:44747616-44747635 | None:intergenic | 35.0% |
| ! | TACCTTTAGTTCACATGAGT+CGG | - | chr4.2:44747178-44747197 | MS.gene08751:intron | 35.0% |
| ! | TTTGGAGGGTGCAATAATAT+TGG | - | chr4.2:44748433-44748452 | MS.gene08751:intron | 35.0% |
| !! | AGGCACTGAAAGACTATTAT+AGG | - | chr4.2:44749050-44749069 | MS.gene08751:intron | 35.0% |
| !! | ATGCTTCATAAAGCTTTGGA+GGG | - | chr4.2:44748419-44748438 | MS.gene08751:intron | 35.0% |
| !! | CAAAGCTTGCTAAGATTATG+AGG | - | chr4.2:44750985-44751004 | MS.gene08751:CDS | 35.0% |
| !! | GTTTTATTGCTCCGTACTTT+AGG | + | chr4.2:44747508-44747527 | None:intergenic | 35.0% |
| !! | TATTTCAAGACTTGTTGGCT+GGG | - | chr4.2:44748871-44748890 | MS.gene08751:intron | 35.0% |
| !! | TTATTTCAAGACTTGTTGGC+TGG | - | chr4.2:44748870-44748889 | MS.gene08751:intron | 35.0% |
| !! | TTCCTAGTCTTAGTTCAGTA+CGG | + | chr4.2:44747551-44747570 | None:intergenic | 35.0% |
| !!! | GTGTTTTTAGTTTTCAGGAC+TGG | - | chr4.2:44748000-44748019 | MS.gene08751:intron | 35.0% |
| AAAAACATCCACAGTGGTCT+TGG | + | chr4.2:44748468-44748487 | None:intergenic | 40.0% | |
| AAAACATCCACAGTGGTCTT+GGG | + | chr4.2:44748467-44748486 | None:intergenic | 40.0% | |
| AACCGTACTGAACTAAGACT+AGG | - | chr4.2:44747546-44747565 | MS.gene08751:CDS | 40.0% | |
| AATCAAGGCTGCAACATCAT+GGG | + | chr4.2:44750790-44750809 | None:intergenic | 40.0% | |
| AATTGAGGTCACATTAGCTG+CGG | + | chr4.2:44750746-44750765 | None:intergenic | 40.0% | |
| AGAGTGAAGAAGCTTACAAG+CGG | + | chr4.2:44747068-44747087 | None:intergenic | 40.0% | |
| AGCAGACTCAATAGAGGTTT+GGG | - | chr4.2:44747706-44747725 | MS.gene08751:intron | 40.0% | |
| AGCTAATGTGACCTCAATTG+CGG | - | chr4.2:44750747-44750766 | MS.gene08751:intron | 40.0% | |
| AGCTGACATTGCAATTCAGA+CGG | + | chr4.2:44748248-44748267 | None:intergenic | 40.0% | |
| AGGCAGACCTCATTAATCTT+TGG | + | chr4.2:44750501-44750520 | None:intergenic | 40.0% | |
| ATACTTCAATCAGCATGACG+AGG | - | chr4.2:44748126-44748145 | MS.gene08751:CDS | 40.0% | |
| ATGAAGGAATAGTTCATGGC+AGG | + | chr4.2:44750262-44750281 | None:intergenic | 40.0% | |
| ATGCCTTCAATCAGAAGAGT+TGG | - | chr4.2:44747807-44747826 | MS.gene08751:intron | 40.0% | |
| ATGCTATCGTGCATAGAGTA+TGG | + | chr4.2:44750112-44750131 | None:intergenic | 40.0% | |
| CAATGCAAAAACATCCACAG+TGG | + | chr4.2:44748474-44748493 | None:intergenic | 40.0% | |
| CTCTATTGAGTCTGCTATGA+GGG | + | chr4.2:44747702-44747721 | None:intergenic | 40.0% | |
| GAACATCAGTTGTTGAAAGG+GGG | + | chr4.2:44749369-44749388 | None:intergenic | 40.0% | |
| GATTGCAATAATCCCCTTCT+AGG | - | chr4.2:44749153-44749172 | MS.gene08751:intron | 40.0% | |
| GCAATGATGTACAGTGATAC+AGG | - | chr4.2:44748222-44748241 | MS.gene08751:intron | 40.0% | |
| GCAGACCTCATTAATCTTTG+GGG | + | chr4.2:44750499-44750518 | None:intergenic | 40.0% | |
| GGCAGACCTCATTAATCTTT+GGG | + | chr4.2:44750500-44750519 | None:intergenic | 40.0% | |
| GGTATTTCCAAACTCAGCAT+AGG | + | chr4.2:44748052-44748071 | None:intergenic | 40.0% | |
| GTCTCTATGTTGTCAAGATC+GGG | + | chr4.2:44747787-44747806 | None:intergenic | 40.0% | |
| GTTCAAAGAGTCCTAACACA+AGG | - | chr4.2:44749385-44749404 | MS.gene08751:intron | 40.0% | |
| TAATATACCTGTCCACGAAC+TGG | + | chr4.2:44748288-44748307 | None:intergenic | 40.0% | |
| TAGCAACCGATATGACAACT+GGG | + | chr4.2:44749788-44749807 | None:intergenic | 40.0% | |
| TAGCAGACTCAATAGAGGTT+TGG | - | chr4.2:44747705-44747724 | MS.gene08751:intron | 40.0% | |
| TCTATGCACGATAGCATGTT+TGG | - | chr4.2:44750115-44750134 | MS.gene08751:intron | 40.0% | |
| TGAAGGAATAGTTCATGGCA+GGG | + | chr4.2:44750261-44750280 | None:intergenic | 40.0% | |
| TGAATTACTATCATAGGCGC+TGG | - | chr4.2:44748934-44748953 | MS.gene08751:intron | 40.0% | |
| TGATCTCCCAGTTGTCATAT+CGG | - | chr4.2:44749779-44749798 | MS.gene08751:intron | 40.0% | |
| TGCCATGAACTATTCCTTCA+TGG | - | chr4.2:44750261-44750280 | MS.gene08751:intron | 40.0% | |
| TGCCATGAAGGAATAGTTCA+TGG | + | chr4.2:44750266-44750285 | None:intergenic | 40.0% | |
| TGCTTCTCAAGGAAGAAGAT+TGG | - | chr4.2:44747005-44747024 | MS.gene08751:CDS | 40.0% | |
| ! | AAGCAGTGGTTTCCTTTTAC+CGG | + | chr4.2:44746990-44747009 | None:intergenic | 40.0% |
| ! | AATAAACTGCTGTGGTGTCA+TGG | - | chr4.2:44747224-44747243 | MS.gene08751:intron | 40.0% |
| ! | ACATTTGGTTTCCTTCATGC+AGG | - | chr4.2:44750935-44750954 | MS.gene08751:CDS | 40.0% |
| ! | ACGGATGGAGTAGCATTTTA+GGG | + | chr4.2:44747267-44747286 | None:intergenic | 40.0% |
| ! | ATTTGGTTTCCTTCATGCAG+GGG | - | chr4.2:44750937-44750956 | MS.gene08751:CDS | 40.0% |
| ! | CATGCTTCATAAAGCTTTGG+AGG | - | chr4.2:44748418-44748437 | MS.gene08751:intron | 40.0% |
| ! | CATTTGGTTTCCTTCATGCA+GGG | - | chr4.2:44750936-44750955 | MS.gene08751:CDS | 40.0% |
| ! | CTCCAAAGCTTTATGAAGCA+TGG | + | chr4.2:44748420-44748439 | None:intergenic | 40.0% |
| !! | AAGTACTGAGAGACAAACAC+GGG | + | chr4.2:44747963-44747982 | None:intergenic | 40.0% |
| !! | AGACTTCTAGCTTCTGTGTA+AGG | - | chr4.2:44749236-44749255 | MS.gene08751:intron | 40.0% |
| !! | CACTGTGGATGTTTTTGCAT+TGG | - | chr4.2:44748472-44748491 | MS.gene08751:intron | 40.0% |
| !! | GAAGTACTGAGAGACAAACA+CGG | + | chr4.2:44747964-44747983 | None:intergenic | 40.0% |
| !! | TAATAGCTGTTTTGCGCAAC+TGG | - | chr4.2:44749456-44749475 | MS.gene08751:intron | 40.0% |
| !! | TACCGACTCATGTGAACTAA+AGG | + | chr4.2:44747183-44747202 | None:intergenic | 40.0% |
| !!! | TGCTTATATTTTGGGACGGA+TGG | + | chr4.2:44747282-44747301 | None:intergenic | 40.0% |
| !!! | TGGAGTAGCATTTTAGGGTT+TGG | + | chr4.2:44747262-44747281 | None:intergenic | 40.0% |
| AACTACCTCACTCCCTAGAA+GGG | + | chr4.2:44749169-44749188 | None:intergenic | 45.0% | |
| AAGGAAACCACTGCTTCTCA+AGG | - | chr4.2:44746994-44747013 | MS.gene08751:CDS | 45.0% | |
| ACATGAGTCGGTATCGTGTT+GGG | - | chr4.2:44747190-44747209 | MS.gene08751:intron | 45.0% | |
| ACCTCTTCGCATTAACGCAA+GGG | + | chr4.2:44748714-44748733 | None:intergenic | 45.0% | |
| AGAATCTGCTTCTGATGCAC+AGG | - | chr4.2:44751019-44751038 | MS.gene08751:CDS | 45.0% | |
| ATCACCCAACTGACAGTTAC+CGG | - | chr4.2:44750462-44750481 | MS.gene08751:intron | 45.0% | |
| ATTGCCTTCTTGCTCTCTCT+TGG | + | chr4.2:44748207-44748226 | None:intergenic | 45.0% | |
| CAAAGTGAGACAGTATCCTG+AGG | + | chr4.2:44750585-44750604 | None:intergenic | 45.0% | |
| CAATCAAGGCTGCAACATCA+TGG | + | chr4.2:44750791-44750810 | None:intergenic | 45.0% | |
| CCTCATAGCAGACTCAATAG+AGG | - | chr4.2:44747700-44747719 | MS.gene08751:intron | 45.0% | |
| CCTCTATTGAGTCTGCTATG+AGG | + | chr4.2:44747703-44747722 | None:intergenic | 45.0% | |
| CTAGCAACCGATATGACAAC+TGG | + | chr4.2:44749789-44749808 | None:intergenic | 45.0% | |
| GAAGGGGGTTTGAATCTAAC+TGG | - | chr4.2:44748832-44748851 | MS.gene08751:intron | 45.0% | |
| GAGTGAAGAAGCTTACAAGC+GGG | + | chr4.2:44747067-44747086 | None:intergenic | 45.0% | |
| GATTGCAACCTAGCTGCATA+TGG | - | chr4.2:44748787-44748806 | MS.gene08751:intron | 45.0% | |
| GCAAAACAAGCATGCCATGA+AGG | + | chr4.2:44750278-44750297 | None:intergenic | 45.0% | |
| GCACCAACTCTTCTGATTGA+AGG | + | chr4.2:44747813-44747832 | None:intergenic | 45.0% | |
| GCAGACTCAATAGAGGTTTG+GGG | - | chr4.2:44747707-44747726 | MS.gene08751:intron | 45.0% | |
| GCATGGAACTGTACTCTTTG+TGG | + | chr4.2:44748403-44748422 | None:intergenic | 45.0% | |
| GTATTCCAAGTTGTAAGGCG+AGG | - | chr4.2:44749030-44749049 | MS.gene08751:intron | 45.0% | |
| GTCCACCCCAAAGATTAATG+AGG | - | chr4.2:44750491-44750510 | MS.gene08751:intron | 45.0% | |
| TAACTACCTCACTCCCTAGA+AGG | + | chr4.2:44749170-44749189 | None:intergenic | 45.0% | |
| TACCTCTTCGCATTAACGCA+AGG | + | chr4.2:44748715-44748734 | None:intergenic | 45.0% | |
| TCTTCTTCCTTGAGAAGCAG+TGG | + | chr4.2:44747004-44747023 | None:intergenic | 45.0% | |
| TGCATAGAGTATGGTCTCCA+CGG | + | chr4.2:44750103-44750122 | None:intergenic | 45.0% | |
| TGCTATCACAACCGCAATTG+AGG | + | chr4.2:44750761-44750780 | None:intergenic | 45.0% | |
| TGGGTGATTTCATAGCGAGA+AGG | + | chr4.2:44750450-44750469 | None:intergenic | 45.0% | |
| TGTCGGACAATAAACTGCTG+TGG | - | chr4.2:44747216-44747235 | MS.gene08751:intron | 45.0% | |
| ! | AAACATCCACAGTGGTCTTG+GGG | + | chr4.2:44748466-44748485 | None:intergenic | 45.0% |
| ! | ACGTTTTCAACTCCAGTTCG+TGG | - | chr4.2:44748273-44748292 | MS.gene08751:intron | 45.0% |
| ! | AGTCTGCTATGAGGGTTTTG+GGG | + | chr4.2:44747694-44747713 | None:intergenic | 45.0% |
| ! | GACCTCATTAATCTTTGGGG+TGG | + | chr4.2:44750496-44750515 | None:intergenic | 45.0% |
| ! | GACGGATGGAGTAGCATTTT+AGG | + | chr4.2:44747268-44747287 | None:intergenic | 45.0% |
| ! | GAGTCTGCTATGAGGGTTTT+GGG | + | chr4.2:44747695-44747714 | None:intergenic | 45.0% |
| ! | GGAGGGAGTATAGATGATAC+CGG | - | chr4.2:44747390-44747409 | MS.gene08751:intron | 45.0% |
| ! | TGAGTCTGCTATGAGGGTTT+TGG | + | chr4.2:44747696-44747715 | None:intergenic | 45.0% |
| !! | CTTTTACCGGTTGTCAGAGA+CGG | + | chr4.2:44746977-44746996 | None:intergenic | 45.0% |
| !! | GGATGTTTTTGCATTGGTGC+TGG | - | chr4.2:44748478-44748497 | MS.gene08751:intron | 45.0% |
| !! | TAAAATAAATAATAAATTGT+TGG | + | chr4.2:44747103-44747122 | None:intergenic | 5.0% |
| AACTGACAGTTACCGGCGAA+TGG | - | chr4.2:44750469-44750488 | MS.gene08751:intron | 50.0% | |
| ACTACCTCACTCCCTAGAAG+GGG | + | chr4.2:44749168-44749187 | None:intergenic | 50.0% | |
| ATGGGAGGCCCTAAAAACCA+AGG | + | chr4.2:44749910-44749929 | None:intergenic | 50.0% | |
| ATTCGCCGGTAACTGTCAGT+TGG | + | chr4.2:44750470-44750489 | None:intergenic | 50.0% | |
| CACATGAGTCGGTATCGTGT+TGG | - | chr4.2:44747189-44747208 | MS.gene08751:intron | 50.0% | |
| CATGAGTCGGTATCGTGTTG+GGG | - | chr4.2:44747191-44747210 | MS.gene08751:intron | 50.0% | |
| CGGGCTATAGCAGAATAGCA+TGG | + | chr4.2:44747768-44747787 | None:intergenic | 50.0% | |
| CGTCTCTGACAACCGGTAAA+AGG | - | chr4.2:44746975-44746994 | MS.gene08751:CDS | 50.0% | |
| GAGGAGGAAAACTGCCAAGA+TGG | - | chr4.2:44750402-44750421 | MS.gene08751:intron | 50.0% | |
| GAGTGCATCCATATGCAGCT+AGG | + | chr4.2:44748798-44748817 | None:intergenic | 50.0% | |
| GGATCTGCCTATGCTGAGTT+TGG | - | chr4.2:44748042-44748061 | MS.gene08751:intron | 50.0% | |
| GGTTCTTACCGAGACATGAC+TGG | + | chr4.2:44750362-44750381 | None:intergenic | 50.0% | |
| GTCTACACTGGTGGAAACCA+CGG | + | chr4.2:44747045-44747064 | None:intergenic | 50.0% | |
| TACTCACCGTCTCTGACAAC+CGG | - | chr4.2:44746968-44746987 | MS.gene08751:CDS | 50.0% | |
| TCCCTTGCGTTAATGCGAAG+AGG | - | chr4.2:44748710-44748729 | MS.gene08751:intron | 50.0% | |
| TTCAACTCCAGTTCGTGGAC+AGG | - | chr4.2:44748278-44748297 | MS.gene08751:intron | 50.0% | |
| TTCATTCCCCAAGACCACTG+TGG | - | chr4.2:44748457-44748476 | MS.gene08751:intron | 50.0% | |
| TTCGCCGGTAACTGTCAGTT+GGG | + | chr4.2:44750469-44750488 | None:intergenic | 50.0% | |
| ! | GGCTGCAACATCATGGGTTT+TGG | + | chr4.2:44750784-44750803 | None:intergenic | 50.0% |
| ! | TAATCCCCTTCTAGGGAGTG+AGG | - | chr4.2:44749161-44749180 | MS.gene08751:intron | 50.0% |
| !! | ATCGGTTGCTAGTCTTGCCT+TGG | - | chr4.2:44749797-44749816 | MS.gene08751:intron | 50.0% |
| !! | GCATTGGTGCTGGAATCTAG+TGG | - | chr4.2:44748488-44748507 | MS.gene08751:intron | 50.0% |
| AGAGACGGTGAGTATGTCGC+CGG | + | chr4.2:44746962-44746981 | None:intergenic | 55.0% | |
| AGCAGAATAGCATGGCGCTG+TGG | + | chr4.2:44747760-44747779 | None:intergenic | 55.0% | |
| AGTCTTGCCTTGGCAGATGC+CGG | - | chr4.2:44749807-44749826 | MS.gene08751:intron | 55.0% | |
| CACGGGATATGACGCTGACA+TGG | + | chr4.2:44747946-44747965 | None:intergenic | 55.0% | |
| CAGTATTCCGGCATCTGCCA+AGG | + | chr4.2:44749817-44749836 | None:intergenic | 55.0% | |
| CAGTGCCTCGCCTTACAACT+TGG | + | chr4.2:44749038-44749057 | None:intergenic | 55.0% | |
| CCACTGAAACTGAGGCGACA+AGG | + | chr4.2:44749848-44749867 | None:intergenic | 55.0% | |
| CCTTGTCGCCTCAGTTTCAG+TGG | - | chr4.2:44749845-44749864 | MS.gene08751:intron | 55.0% | |
| CGGCAAAAGTGGAACGACTC+CGG | - | chr4.2:44746940-44746959 | MS.gene08751:CDS | 55.0% | |
| GCTTACAAGCGGGTCTACAC+TGG | + | chr4.2:44747057-44747076 | None:intergenic | 55.0% | |
| GGTATCGTGTTGGGGTCTGT+CGG | - | chr4.2:44747199-44747218 | MS.gene08751:intron | 55.0% | |
| TACAAGCGGGTCTACACTGG+TGG | + | chr4.2:44747054-44747073 | None:intergenic | 55.0% | |
| TGGGCCAAGAGAGAGCAAGA+AGG | - | chr4.2:44748200-44748219 | MS.gene08751:intron | 55.0% | |
| ! | GGTGCTGTGAATGCTGCATC+AGG | - | chr4.2:44748021-44748040 | MS.gene08751:intron | 55.0% |
| !! | CGGAGTCGTTCCACTTTTGC+CGG | + | chr4.2:44746942-44746961 | None:intergenic | 55.0% |
| CAGCTGCATCCCCTGCATGA+AGG | + | chr4.2:44750949-44750968 | None:intergenic | 60.0% | |
| CTGGTGGAAACCACGGCCAT+CGG | + | chr4.2:44747038-44747057 | None:intergenic | 60.0% | |
| GAAGATTGGACCCGACCCGA+TGG | - | chr4.2:44747019-44747038 | MS.gene08751:intron | 60.0% | |
| GGCGCTGTGGCGATTGGATT+TGG | + | chr4.2:44747747-44747766 | None:intergenic | 60.0% | |
| TAGCATGGCGCTGTGGCGAT+TGG | + | chr4.2:44747753-44747772 | None:intergenic | 60.0% | |
| TGGTGGAAACCACGGCCATC+GGG | + | chr4.2:44747037-44747056 | None:intergenic | 60.0% | |
| !! | CTTTGGGGTGGACCATTCGC+CGG | + | chr4.2:44750484-44750503 | None:intergenic | 60.0% |
| GAAACCACGGCCATCGGGTC+GGG | + | chr4.2:44747032-44747051 | None:intergenic | 65.0% | |
| GCAGGGGATGCAGCTGTGCT+TGG | - | chr4.2:44750953-44750972 | MS.gene08751:CDS | 65.0% | |
| GGAAACCACGGCCATCGGGT+CGG | + | chr4.2:44747033-44747052 | None:intergenic | 65.0% | |
| TGGACCCGACCCGATGGCCG+TGG | - | chr4.2:44747025-44747044 | MS.gene08751:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 44746935 | 44751055 | 44746935 | ID=MS.gene08751 |
| chr4.2 | mRNA | 44746935 | 44751055 | 44746935 | ID=MS.gene08751.t1;Parent=MS.gene08751 |
| chr4.2 | exon | 44750920 | 44751055 | 44750920 | ID=MS.gene08751.t1.exon1;Parent=MS.gene08751.t1 |
| chr4.2 | CDS | 44750920 | 44751055 | 44750920 | ID=cds.MS.gene08751.t1;Parent=MS.gene08751.t1 |
| chr4.2 | exon | 44749902 | 44749980 | 44749902 | ID=MS.gene08751.t1.exon2;Parent=MS.gene08751.t1 |
| chr4.2 | CDS | 44749902 | 44749980 | 44749902 | ID=cds.MS.gene08751.t1;Parent=MS.gene08751.t1 |
| chr4.2 | exon | 44749691 | 44749793 | 44749691 | ID=MS.gene08751.t1.exon3;Parent=MS.gene08751.t1 |
| chr4.2 | CDS | 44749691 | 44749793 | 44749691 | ID=cds.MS.gene08751.t1;Parent=MS.gene08751.t1 |
| chr4.2 | exon | 44749478 | 44749598 | 44749478 | ID=MS.gene08751.t1.exon4;Parent=MS.gene08751.t1 |
| chr4.2 | CDS | 44749478 | 44749598 | 44749478 | ID=cds.MS.gene08751.t1;Parent=MS.gene08751.t1 |
| chr4.2 | exon | 44748124 | 44748212 | 44748124 | ID=MS.gene08751.t1.exon5;Parent=MS.gene08751.t1 |
| chr4.2 | CDS | 44748124 | 44748212 | 44748124 | ID=cds.MS.gene08751.t1;Parent=MS.gene08751.t1 |
| chr4.2 | exon | 44747478 | 44747627 | 44747478 | ID=MS.gene08751.t1.exon6;Parent=MS.gene08751.t1 |
| chr4.2 | CDS | 44747478 | 44747627 | 44747478 | ID=cds.MS.gene08751.t1;Parent=MS.gene08751.t1 |
| chr4.2 | exon | 44746935 | 44747033 | 44746935 | ID=MS.gene08751.t1.exon7;Parent=MS.gene08751.t1 |
| chr4.2 | CDS | 44746935 | 44747033 | 44746935 | ID=cds.MS.gene08751.t1;Parent=MS.gene08751.t1 |
| Gene Sequence |
| Protein sequence |
