Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08851.t1 | XP_013446598.1 | 95.3 | 516 | 23 | 1 | 1 | 516 | 1 | 515 | 6.60E-270 | 939.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08851.t1 | A0A1P8B760 | 61.3 | 488 | 175 | 6 | 27 | 509 | 30 | 508 | 2.2e-152 | 540.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08851.t1 | A0A072U458 | 95.3 | 516 | 23 | 1 | 1 | 516 | 1 | 515 | 4.8e-270 | 939.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055251 | MS.gene08851 | 0.812117 | 4.98E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08851.t1 | MTR_8g080880 | 95.349 | 516 | 23 | 1 | 1 | 516 | 1 | 515 | 0.0 | 996 |
| MS.gene08851.t1 | MTR_8g080890 | 91.245 | 514 | 45 | 0 | 1 | 514 | 1 | 514 | 0.0 | 951 |
| MS.gene08851.t1 | MTR_8g080840 | 85.106 | 517 | 72 | 2 | 1 | 516 | 3 | 515 | 0.0 | 885 |
| MS.gene08851.t1 | MTR_8g097220 | 83.591 | 518 | 78 | 3 | 1 | 516 | 1 | 513 | 0.0 | 871 |
| MS.gene08851.t1 | MTR_8g080870 | 85.832 | 487 | 68 | 1 | 31 | 516 | 1 | 487 | 0.0 | 856 |
| MS.gene08851.t1 | MTR_4g074030 | 59.524 | 504 | 189 | 9 | 16 | 509 | 9 | 507 | 0.0 | 565 |
| MS.gene08851.t1 | MTR_4g073970 | 57.049 | 305 | 117 | 7 | 206 | 500 | 1 | 301 | 1.07e-112 | 336 |
| MS.gene08851.t1 | MTR_4g073980 | 62.590 | 139 | 49 | 2 | 45 | 182 | 26 | 162 | 5.14e-49 | 167 |
| MS.gene08851.t1 | MTR_8g080850 | 87.179 | 78 | 10 | 0 | 439 | 516 | 1 | 78 | 1.08e-39 | 139 |
| MS.gene08851.t1 | MTR_8g095600 | 33.600 | 250 | 149 | 7 | 41 | 288 | 162 | 396 | 5.18e-31 | 126 |
| MS.gene08851.t1 | MTR_8g095600 | 33.600 | 250 | 149 | 7 | 41 | 288 | 162 | 396 | 1.66e-30 | 125 |
| MS.gene08851.t1 | MTR_8g095600 | 33.600 | 250 | 149 | 7 | 41 | 288 | 178 | 412 | 2.45e-30 | 125 |
| MS.gene08851.t1 | MTR_8g095600 | 33.600 | 250 | 149 | 7 | 41 | 288 | 162 | 396 | 2.48e-30 | 125 |
| MS.gene08851.t1 | MTR_3g048950 | 33.457 | 269 | 168 | 5 | 54 | 318 | 55 | 316 | 4.33e-26 | 112 |
| MS.gene08851.t1 | MTR_2g010180 | 27.687 | 307 | 209 | 6 | 33 | 334 | 121 | 419 | 2.10e-21 | 98.2 |
| MS.gene08851.t1 | MTR_2g010180 | 24.950 | 501 | 311 | 13 | 33 | 501 | 121 | 588 | 2.58e-21 | 97.8 |
| MS.gene08851.t1 | MTR_2g010180 | 24.950 | 501 | 311 | 13 | 33 | 501 | 135 | 602 | 2.62e-21 | 97.8 |
| MS.gene08851.t1 | MTR_3g096980 | 25.502 | 498 | 317 | 20 | 41 | 516 | 135 | 600 | 2.18e-17 | 85.9 |
| MS.gene08851.t1 | MTR_8g094740 | 23.242 | 512 | 329 | 17 | 22 | 504 | 117 | 593 | 3.05e-13 | 72.8 |
| MS.gene08851.t1 | MTR_1g082750 | 39.496 | 119 | 66 | 3 | 141 | 258 | 63 | 176 | 4.29e-13 | 71.6 |
| MS.gene08851.t1 | MTR_8g094740 | 26.953 | 256 | 175 | 5 | 22 | 272 | 117 | 365 | 2.91e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08851.t1 | AT4G34880 | 62.705 | 488 | 168 | 6 | 27 | 509 | 30 | 508 | 0.0 | 573 |
| MS.gene08851.t1 | AT4G34880 | 55.852 | 487 | 157 | 7 | 27 | 509 | 30 | 462 | 2.85e-178 | 509 |
| MS.gene08851.t1 | AT5G07360 | 33.469 | 245 | 148 | 7 | 41 | 282 | 204 | 436 | 2.49e-28 | 119 |
| MS.gene08851.t1 | AT5G07360 | 33.469 | 245 | 148 | 7 | 41 | 282 | 204 | 436 | 2.49e-28 | 119 |
| MS.gene08851.t1 | AT3G25660 | 33.673 | 294 | 176 | 8 | 53 | 339 | 57 | 338 | 3.44e-25 | 109 |
| MS.gene08851.t1 | AT5G07360 | 33.061 | 245 | 142 | 8 | 41 | 282 | 204 | 429 | 3.44e-25 | 110 |
| MS.gene08851.t1 | AT5G64440 | 27.734 | 256 | 169 | 5 | 36 | 284 | 125 | 371 | 2.24e-17 | 85.9 |
| MS.gene08851.t1 | AT1G08980 | 40.336 | 119 | 65 | 3 | 141 | 258 | 64 | 177 | 6.59e-14 | 74.3 |
Find 127 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAATATACTCACCGATTT+TGG | 0.052657 | 4.2:-13657133 | None:intergenic |
| GTTGCATGGAATACCTATTT+TGG | 0.183488 | 4.2:+13654814 | MS.gene08851:CDS |
| AAAGCTGGGGCTATTATATT+AGG | 0.207407 | 4.2:+13654944 | MS.gene08851:CDS |
| GTGAAGCAACTAATTCTTTC+AGG | 0.216627 | 4.2:-13657066 | None:intergenic |
| CTCCTTTGAGAACCGGGTTT+TGG | 0.235272 | 4.2:-13654706 | None:intergenic |
| GTGTCTTGCCTTGGGCTAAT+TGG | 0.289799 | 4.2:-13656430 | None:intergenic |
| AATATCAGTAGCAGCAAATT+TGG | 0.294381 | 4.2:+13656294 | MS.gene08851:CDS |
| TGAGTGAGTGGTCACATTAC+AGG | 0.307159 | 4.2:+13654978 | MS.gene08851:CDS |
| AATTGAGCATAGCCACCTTT+TGG | 0.307622 | 4.2:-13656701 | None:intergenic |
| ATGACAAGATTGTCACATAA+TGG | 0.309835 | 4.2:+13657405 | MS.gene08851:CDS |
| TTGATGTTAACTGCTTTCTT+TGG | 0.312414 | 4.2:-13654646 | None:intergenic |
| TCTGCTTGTGCTAATGCATC+TGG | 0.313056 | 4.2:-13654743 | None:intergenic |
| ATGTTATCCTTAACCAAAAT+AGG | 0.317243 | 4.2:-13654827 | None:intergenic |
| CAGCCTGCAGCATGAGATCT+TGG | 0.321727 | 4.2:-13657335 | None:intergenic |
| GTTTGGAAATGACACATTAC+TGG | 0.325517 | 4.2:+13656781 | MS.gene08851:CDS |
| TACCCAACTGTGTCTTGCCT+TGG | 0.328875 | 4.2:-13656439 | None:intergenic |
| CATACATGAAGGGCATAAAA+TGG | 0.329473 | 4.2:-13656350 | None:intergenic |
| GCTGAAAACACAAACGGAAT+TGG | 0.344147 | 4.2:+13657354 | MS.gene08851:CDS |
| TGGATTGAGAGGAAAGAGAT+TGG | 0.350640 | 4.2:+13656736 | MS.gene08851:CDS |
| GTGCTTTGGTCCTTCTCTCT+TGG | 0.365774 | 4.2:-13654775 | None:intergenic |
| AGACTTACCTTAACGTGTTT+AGG | 0.366426 | 4.2:-13656823 | None:intergenic |
| TCCAATACTCCTTTGAGAAC+CGG | 0.372772 | 4.2:-13654713 | None:intergenic |
| AAGCACCTGGTTCTCTTTCA+AGG | 0.377380 | 4.2:+13654792 | MS.gene08851:CDS |
| ACCCAACTGTGTCTTGCCTT+GGG | 0.380722 | 4.2:-13656438 | None:intergenic |
| GTAAGAATATACTACGAGTT+TGG | 0.386299 | 4.2:+13656764 | MS.gene08851:CDS |
| TGACAAGATTGTCACATAAT+GGG | 0.387697 | 4.2:+13657406 | MS.gene08851:CDS |
| CTTGCCATTGGAGGTTATCC+TGG | 0.389584 | 4.2:+13657498 | MS.gene08851:CDS |
| TTTGCTGCTACTGATATTGC+CGG | 0.390842 | 4.2:-13656289 | None:intergenic |
| TCAGATACAGTCCTGCAAAT+AGG | 0.391218 | 4.2:-13656602 | None:intergenic |
| TGAAAGAGAACCAGGTGCTT+TGG | 0.397701 | 4.2:-13654789 | None:intergenic |
| GTTGTTGTTGATAGCATAGA+AGG | 0.400557 | 4.2:-13654566 | None:intergenic |
| TTCTTTCAGGTACTTATTCA+AGG | 0.401325 | 4.2:-13657053 | None:intergenic |
| CAGCCATTTGGAATTTGCTT+CGG | 0.404070 | 4.2:+13657552 | MS.gene08851:CDS |
| AAGGGAGTGTAACTAGTAGA+AGG | 0.404094 | 4.2:-13654547 | None:intergenic |
| TAAGCAATTTCAATCAACTT+TGG | 0.417086 | 4.2:-13657594 | None:intergenic |
| AGCTACACCTAAACACGTTA+AGG | 0.417453 | 4.2:+13656816 | MS.gene08851:CDS |
| CTGAAAACACAAACGGAATT+GGG | 0.420174 | 4.2:+13657355 | MS.gene08851:CDS |
| TGGTCACATTACAGGTCTAA+TGG | 0.420524 | 4.2:+13654986 | MS.gene08851:CDS |
| GCTCAATTTCTAAAGAAAGA+TGG | 0.421932 | 4.2:+13656716 | MS.gene08851:CDS |
| TATGAAAAGGATCAGCCATT+TGG | 0.422331 | 4.2:+13657540 | MS.gene08851:CDS |
| CCCGGTTCTCAAAGGAGTAT+TGG | 0.431167 | 4.2:+13654712 | MS.gene08851:CDS |
| GTTAACAAGTTAAGGAAAGC+TGG | 0.436209 | 4.2:+13654929 | MS.gene08851:CDS |
| CAAGGATCATCCAATGTGTA+TGG | 0.439013 | 4.2:-13656250 | None:intergenic |
| AAGCTGGGGCTATTATATTA+GGG | 0.441388 | 4.2:+13654945 | MS.gene08851:CDS |
| GCTTTCTTTGGAAGGCAAGT+TGG | 0.441871 | 4.2:-13654634 | None:intergenic |
| CAGGTGTAGTTAACAAGTTA+AGG | 0.444024 | 4.2:+13654921 | MS.gene08851:CDS |
| TGATGCTGTGGTAATACCTT+TGG | 0.445327 | 4.2:+13657458 | MS.gene08851:CDS |
| TCGTAGGAGAAACTTGAGTA+TGG | 0.447769 | 4.2:+13657312 | MS.gene08851:intron |
| TTTAGTAACATACTTGCCAT+TGG | 0.461482 | 4.2:+13657486 | MS.gene08851:CDS |
| CCAATACTCCTTTGAGAACC+GGG | 0.467786 | 4.2:-13654712 | None:intergenic |
| GCCCAAGGCAAGACACAGTT+GGG | 0.473558 | 4.2:+13656437 | MS.gene08851:CDS |
| CAACAAGAAACACCCAAAAT+CGG | 0.477192 | 4.2:+13657120 | MS.gene08851:CDS |
| TTAACTACACCTGCATCTCT+TGG | 0.477941 | 4.2:-13654911 | None:intergenic |
| GAGAGGAAAGAGATTGGGAG+TGG | 0.480046 | 4.2:+13656742 | MS.gene08851:CDS |
| TCATGTATGAACTCAGTAGT+AGG | 0.484329 | 4.2:+13656364 | MS.gene08851:CDS |
| GGTTCTCTTTCAAGGTTGCA+TGG | 0.486306 | 4.2:+13654800 | MS.gene08851:CDS |
| ATCAAACTTCTAACTTTCGA+AGG | 0.491265 | 4.2:-13657656 | None:intergenic |
| GGATTGAGAGGAAAGAGATT+GGG | 0.491920 | 4.2:+13656737 | MS.gene08851:CDS |
| AATGGCAAGTATGTTACTAA+AGG | 0.492484 | 4.2:-13657484 | None:intergenic |
| CCATTTGGAATTTGCTTCGG+AGG | 0.497867 | 4.2:+13657555 | MS.gene08851:CDS |
| TTAACAAGTTAAGGAAAGCT+GGG | 0.500893 | 4.2:+13654930 | MS.gene08851:CDS |
| ATTTGCTTCGGAGGTTTGAA+AGG | 0.508083 | 4.2:+13657564 | MS.gene08851:CDS |
| AAAATTGTCGATGCCTGCTA+TGG | 0.508490 | 4.2:-13656645 | None:intergenic |
| TCAGTAGTGCCAAGAGATGC+AGG | 0.509284 | 4.2:+13654902 | MS.gene08851:CDS |
| GCATCAAAGTATATCCCAAA+AGG | 0.517964 | 4.2:+13656686 | MS.gene08851:CDS |
| TGTTAACTGCTTTCTTTGGA+AGG | 0.518372 | 4.2:-13654642 | None:intergenic |
| TGCAACCTTGAAAGAGAACC+AGG | 0.523206 | 4.2:-13654797 | None:intergenic |
| TCTAACTTTCGAAGGGGAGG+TGG | 0.524924 | 4.2:-13657648 | None:intergenic |
| CTAAAGAAAGATGGATTGAG+AGG | 0.525250 | 4.2:+13656725 | MS.gene08851:CDS |
| AGTAACATACTTGCCATTGG+AGG | 0.525648 | 4.2:+13657489 | MS.gene08851:CDS |
| TGGCCAAGATCTCATGCTGC+AGG | 0.534153 | 4.2:+13657332 | MS.gene08851:CDS |
| TACGTTCTTGAAACCATAGC+AGG | 0.539094 | 4.2:+13656632 | MS.gene08851:CDS |
| TGTTCCAGCAGGATATGAAA+AGG | 0.539625 | 4.2:+13657527 | MS.gene08851:CDS |
| GATTGAGAATCCACTTGCCA+AGG | 0.540521 | 4.2:-13654588 | None:intergenic |
| CCTCCGAAGCAAATTCCAAA+TGG | 0.542753 | 4.2:-13657555 | None:intergenic |
| GATCAAAGTTGCTTGCTCAA+AGG | 0.544559 | 4.2:-13657619 | None:intergenic |
| GGCAAGTGGATTCTCAATCA+AGG | 0.546232 | 4.2:+13654592 | MS.gene08851:CDS |
| TGCTTCACCAGTGAAAAGCT+TGG | 0.546928 | 4.2:+13657081 | MS.gene08851:CDS |
| ACTACTGAGTTCATACATGA+AGG | 0.549148 | 4.2:-13656361 | None:intergenic |
| TGCTAGAGGTGGACAAGGAA+AGG | 0.550614 | 4.2:+13655027 | MS.gene08851:CDS |
| GATAAGCTAAACACTACTGC+AGG | 0.551568 | 4.2:+13654860 | MS.gene08851:CDS |
| TTGTTGTTGATAGCATAGAA+GGG | 0.551701 | 4.2:-13654565 | None:intergenic |
| TCAAACTTCTAACTTTCGAA+GGG | 0.553186 | 4.2:-13657655 | None:intergenic |
| AGCCCAAGGCAAGACACAGT+TGG | 0.555092 | 4.2:+13656436 | MS.gene08851:CDS |
| CCTGCTGGAACAATCACTCC+AGG | 0.559268 | 4.2:-13657516 | None:intergenic |
| CCTGGAGTGATTGTTCCAGC+AGG | 0.563666 | 4.2:+13657516 | MS.gene08851:CDS |
| GGAAGGCCACTTTGAGTGAG+TGG | 0.565034 | 4.2:+13654966 | MS.gene08851:CDS |
| TTGTGGATCAAGTAGTGGAC+CGG | 0.568221 | 4.2:+13656270 | MS.gene08851:CDS |
| CTAATGGAGCTCCTAGCGGT+TGG | 0.569270 | 4.2:+13655002 | MS.gene08851:CDS |
| GTTGGTCTCACTAGTAGAGC+AGG | 0.569449 | 4.2:+13656400 | MS.gene08851:CDS |
| CTGCAGGCTGAAAACACAAA+CGG | 0.569958 | 4.2:+13657348 | MS.gene08851:CDS |
| ATCCAAAACCCGGTTCTCAA+AGG | 0.571970 | 4.2:+13654704 | MS.gene08851:CDS |
| TTTGCTTCGGAGGTTTGAAA+GGG | 0.576489 | 4.2:+13657565 | MS.gene08851:CDS |
| AAGAAATAAACTTGATGCTG+TGG | 0.585547 | 4.2:+13657446 | MS.gene08851:CDS |
| TATGCTATCAACAACAACCT+TGG | 0.587098 | 4.2:+13654571 | MS.gene08851:CDS |
| CTACTGAGTTCATACATGAA+GGG | 0.587717 | 4.2:-13656360 | None:intergenic |
| TCAACAACAACCTTGGCAAG+TGG | 0.588529 | 4.2:+13654578 | MS.gene08851:CDS |
| GGTTCTCAAAGGAGTATTGG+AGG | 0.589717 | 4.2:+13654715 | MS.gene08851:CDS |
| CCAAATTAAAATCCAAAACC+CGG | 0.591273 | 4.2:+13654694 | MS.gene08851:CDS |
| CCTAGCGGTTGGAGTGCTAG+AGG | 0.596039 | 4.2:+13655013 | MS.gene08851:CDS |
| CCTCTAGCACTCCAACCGCT+AGG | 0.596959 | 4.2:-13655013 | None:intergenic |
| ATGTGACCACTCACTCAAAG+TGG | 0.600148 | 4.2:-13654972 | None:intergenic |
| GAGAGAAGGACCAAAGCACC+TGG | 0.601549 | 4.2:+13654779 | MS.gene08851:CDS |
| CACTCCAGGATAACCTCCAA+TGG | 0.611824 | 4.2:-13657502 | None:intergenic |
| TTCTTCAAAATCAGGCGAAG+AGG | 0.612164 | 4.2:+13656935 | MS.gene08851:intron |
| ACTTCTAACTTTCGAAGGGG+AGG | 0.613064 | 4.2:-13657651 | None:intergenic |
| GATCCTTGTGGATCAAGTAG+TGG | 0.622632 | 4.2:+13656265 | MS.gene08851:CDS |
| TGGGGCTATTATATTAGGGA+AGG | 0.623176 | 4.2:+13654949 | MS.gene08851:CDS |
| AGGGCATAAAATGGAGCCAT+CGG | 0.628207 | 4.2:-13656341 | None:intergenic |
| TCAAAGTATATCCCAAAAGG+TGG | 0.630247 | 4.2:+13656689 | MS.gene08851:CDS |
| TACACATTGGATGATCCTTG+TGG | 0.640179 | 4.2:+13656253 | MS.gene08851:CDS |
| AGCGGTTGGAGTGCTAGAGG+TGG | 0.641094 | 4.2:+13655016 | MS.gene08851:CDS |
| ATAAAGCTGACCAAGAGAGA+AGG | 0.642713 | 4.2:+13654765 | MS.gene08851:CDS |
| CTACTAGTGAGACCAACCGT+TGG | 0.644995 | 4.2:-13656394 | None:intergenic |
| AATTTGGTGACTGTGTCACT+TGG | 0.645354 | 4.2:+13656310 | MS.gene08851:CDS |
| GTAGGCATCAAACCAACGGT+TGG | 0.648249 | 4.2:+13656382 | MS.gene08851:CDS |
| AAGAGAGCTAGCACATGCTG+AGG | 0.651382 | 4.2:-13654504 | None:intergenic |
| GTGTAGTTCCAATTAGCCCA+AGG | 0.651600 | 4.2:+13656422 | MS.gene08851:CDS |
| TGGAGTGCTAGAGGTGGACA+AGG | 0.653815 | 4.2:+13655022 | MS.gene08851:CDS |
| TAACAAGTTAAGGAAAGCTG+GGG | 0.661025 | 4.2:+13654931 | MS.gene08851:CDS |
| ATGTTACTAAAGGATGCCAA+AGG | 0.670433 | 4.2:-13657474 | None:intergenic |
| CAAACTTCTAACTTTCGAAG+GGG | 0.687115 | 4.2:-13657654 | None:intergenic |
| AGTAGTAGGCATCAAACCAA+CGG | 0.690720 | 4.2:+13656378 | MS.gene08851:CDS |
| TGTGCAGAATCCATACACAT+TGG | 0.705508 | 4.2:+13656240 | MS.gene08851:intron |
| AGGTCTAATGGAGCTCCTAG+CGG | 0.708611 | 4.2:+13654998 | MS.gene08851:CDS |
| TCACTTGGTACTGAAACCGA+TGG | 0.716676 | 4.2:+13656325 | MS.gene08851:CDS |
| GGTCCACTACTTGATCCACA+AGG | 0.746447 | 4.2:-13656268 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTCATATTACTTAAAT+AGG | + | chr4.2:13655778-13655797 | MS.gene08851:intron | 10.0% |
| !! | TAAAAATGTTCATAATATAT+AGG | - | chr4.2:13655508-13655527 | None:intergenic | 10.0% |
| !! | ATTTAATAGCAAAATGTCTT+TGG | - | chr4.2:13656550-13656569 | None:intergenic | 20.0% |
| !! | CAATTTGATCTAAGTTTAAA+TGG | + | chr4.2:13655534-13655553 | MS.gene08851:intron | 20.0% |
| !! | TCACTAATATAATATCCAAT+GGG | + | chr4.2:13655328-13655347 | MS.gene08851:intron | 20.0% |
| !!! | AAAAAGTGAGTGAATATTTT+TGG | + | chr4.2:13656125-13656144 | MS.gene08851:intron | 20.0% |
| !!! | AAATATTCACTCACTTTTTT+TGG | - | chr4.2:13656124-13656143 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCTTAAATAGAGA+AGG | - | chr4.2:13655886-13655905 | None:intergenic | 20.0% |
| !!! | ATAAAGTTTTTCATCTTAAG+TGG | + | chr4.2:13655249-13655268 | MS.gene08851:intron | 20.0% |
| !!! | ATAATCAACTTGAGTTTTTA+GGG | + | chr4.2:13655596-13655615 | MS.gene08851:intron | 20.0% |
| !!! | CATAATGAAGTTATTACTTT+TGG | - | chr4.2:13656154-13656173 | None:intergenic | 20.0% |
| !!! | GTGACTAGTTTTTTTTATTA+AGG | - | chr4.2:13655312-13655331 | None:intergenic | 20.0% |
| !!! | TTAAGCCTATTTAACTTAAA+AGG | - | chr4.2:13655850-13655869 | None:intergenic | 20.0% |
| ! | AATTGTTGTATAAACATCGT+AGG | + | chr4.2:13657296-13657315 | MS.gene08851:intron | 25.0% |
| ! | ATGTTATCCTTAACCAAAAT+AGG | - | chr4.2:13654830-13654849 | None:intergenic | 25.0% |
| ! | CTCTATTTAAGAAAAAAGTC+TGG | + | chr4.2:13655887-13655906 | MS.gene08851:intron | 25.0% |
| ! | CTTTATGTAACAAATAGGAA+TGG | - | chr4.2:13657243-13657262 | None:intergenic | 25.0% |
| ! | GTCACTAATATAATATCCAA+TGG | + | chr4.2:13655327-13655346 | MS.gene08851:intron | 25.0% |
| ! | TAAGCAATTTCAATCAACTT+TGG | - | chr4.2:13657597-13657616 | None:intergenic | 25.0% |
| ! | TTCATATTACTTAAATAGGC+CGG | + | chr4.2:13655782-13655801 | MS.gene08851:intron | 25.0% |
| !! | CATAATCAACTTGAGTTTTT+AGG | + | chr4.2:13655595-13655614 | MS.gene08851:intron | 25.0% |
| !!! | GCTTAGGCTTTAAAAAAATA+TGG | - | chr4.2:13655440-13655459 | None:intergenic | 25.0% |
| !!! | TGTTGACTTAAAGAAAACAT+AGG | - | chr4.2:13656495-13656514 | None:intergenic | 25.0% |
| !!! | TTTGGATTTTAATTTGGTTG+AGG | - | chr4.2:13654691-13654710 | None:intergenic | 25.0% |
| AAAAGCCTCTTAAGCTTATT+AGG | - | chr4.2:13655808-13655827 | None:intergenic | 30.0% | |
| AAGAAATAAACTTGATGCTG+TGG | + | chr4.2:13657446-13657465 | MS.gene08851:CDS | 30.0% | |
| AATATAATATCCAATGGGTG+TGG | + | chr4.2:13655333-13655352 | MS.gene08851:intron | 30.0% | |
| AATATCAGTAGCAGCAAATT+TGG | + | chr4.2:13656294-13656313 | MS.gene08851:CDS | 30.0% | |
| AATGGCAAGTATGTTACTAA+AGG | - | chr4.2:13657487-13657506 | None:intergenic | 30.0% | |
| ATACTTAAGTTCCTATGAGA+AGG | - | chr4.2:13656177-13656196 | None:intergenic | 30.0% | |
| ATAGGCTTAAAAAAAAGCCT+AGG | + | chr4.2:13655860-13655879 | MS.gene08851:intron | 30.0% | |
| ATCTTAAGTGGTAGAGTTAT+AGG | + | chr4.2:13655261-13655280 | MS.gene08851:intron | 30.0% | |
| ATGACAAGATTGTCACATAA+TGG | + | chr4.2:13657405-13657424 | MS.gene08851:CDS | 30.0% | |
| CATAGGAACTTAAGTATGAA+TGG | + | chr4.2:13656180-13656199 | MS.gene08851:intron | 30.0% | |
| CCAAATTAAAATCCAAAACC+CGG | + | chr4.2:13654694-13654713 | MS.gene08851:CDS | 30.0% | |
| CCAATTTGCCACATATATAT+AGG | - | chr4.2:13656467-13656486 | None:intergenic | 30.0% | |
| CCTATATATATGTGGCAAAT+TGG | + | chr4.2:13656464-13656483 | MS.gene08851:intron | 30.0% | |
| CTGGACTTTATGTAACAAAT+AGG | - | chr4.2:13657248-13657267 | None:intergenic | 30.0% | |
| GTAAGAATATACTACGAGTT+TGG | + | chr4.2:13656764-13656783 | MS.gene08851:CDS | 30.0% | |
| TCAAACTTCTAACTTTCGAA+GGG | - | chr4.2:13657658-13657677 | None:intergenic | 30.0% | |
| TGACAAGATTGTCACATAAT+GGG | + | chr4.2:13657406-13657425 | MS.gene08851:CDS | 30.0% | |
| TGTGTACTTTCTTCAAAATC+AGG | + | chr4.2:13656927-13656946 | MS.gene08851:intron | 30.0% | |
| TTAACAAGTTAAGGAAAGCT+GGG | + | chr4.2:13654930-13654949 | MS.gene08851:CDS | 30.0% | |
| TTGATGTTAACTGCTTTCTT+TGG | - | chr4.2:13654649-13654668 | None:intergenic | 30.0% | |
| TTTAGTAACATACTTGCCAT+TGG | + | chr4.2:13657486-13657505 | MS.gene08851:CDS | 30.0% | |
| ! | AATCTCTTCTTAGGTGTTTT+AGG | - | chr4.2:13656045-13656064 | None:intergenic | 30.0% |
| ! | ATGTGTAAACATTGATTGTG+TGG | + | chr4.2:13656568-13656587 | MS.gene08851:intron | 30.0% |
| ! | CCTATTTAACTTAAAAGGTC+AGG | - | chr4.2:13655845-13655864 | None:intergenic | 30.0% |
| ! | GCTCAATTTCTAAAGAAAGA+TGG | + | chr4.2:13656716-13656735 | MS.gene08851:CDS | 30.0% |
| ! | TACTTAATTTGACCATGATC+TGG | + | chr4.2:13655072-13655091 | MS.gene08851:intron | 30.0% |
| ! | TTCTTTCAGGTACTTATTCA+AGG | - | chr4.2:13657056-13657075 | None:intergenic | 30.0% |
| !! | AGGCTTTAAAAAAATATGGC+AGG | - | chr4.2:13655436-13655455 | None:intergenic | 30.0% |
| !! | ATGAATGGTTCTAGAAAATG+AGG | + | chr4.2:13656195-13656214 | MS.gene08851:intron | 30.0% |
| !! | TTGTTGTTGATAGCATAGAA+GGG | - | chr4.2:13654568-13654587 | None:intergenic | 30.0% |
| !!! | AAGTGAGTGAATATTTTTGG+AGG | + | chr4.2:13656128-13656147 | MS.gene08851:intron | 30.0% |
| !!! | ACAATATACTCACCGATTTT+GGG | - | chr4.2:13657135-13657154 | None:intergenic | 30.0% |
| !!! | ATTCACTCACTTTTTTTGGT+TGG | - | chr4.2:13656120-13656139 | None:intergenic | 30.0% |
| !!! | ATTTATCCCTCACTCTTTTT+TGG | - | chr4.2:13655218-13655237 | None:intergenic | 30.0% |
| !!! | ATTTTTTTAAAGCCTAAGCC+TGG | + | chr4.2:13655441-13655460 | MS.gene08851:intron | 30.0% |
| !!! | CCTGACCTTTTAAGTTAAAT+AGG | + | chr4.2:13655842-13655861 | MS.gene08851:intron | 30.0% |
| !!! | TACAATATACTCACCGATTT+TGG | - | chr4.2:13657136-13657155 | None:intergenic | 30.0% |
| !!! | TGGAATACCTATTTTGGTTA+AGG | + | chr4.2:13654820-13654839 | MS.gene08851:CDS | 30.0% |
| !!! | TTGATTGTGTGGTTTTGTAT+AGG | + | chr4.2:13656579-13656598 | MS.gene08851:intron | 30.0% |
| !!! | TTTATCCCTCACTCTTTTTT+GGG | - | chr4.2:13655217-13655236 | None:intergenic | 30.0% |
| AAAGCTGGGGCTATTATATT+AGG | + | chr4.2:13654944-13654963 | MS.gene08851:CDS | 35.0% | |
| AAAGTCTGATACTGTCTGTT+AGG | + | chr4.2:13655471-13655490 | MS.gene08851:intron | 35.0% | |
| AAGCTGGGGCTATTATATTA+GGG | + | chr4.2:13654945-13654964 | MS.gene08851:CDS | 35.0% | |
| ACTACTGAGTTCATACATGA+AGG | - | chr4.2:13656364-13656383 | None:intergenic | 35.0% | |
| ACTTCATTATGCCTTCTCAT+AGG | + | chr4.2:13656163-13656182 | MS.gene08851:intron | 35.0% | |
| AGACTTACCTTAACGTGTTT+AGG | - | chr4.2:13656826-13656845 | None:intergenic | 35.0% | |
| ATCCAGACTAATCTCTTCTT+AGG | - | chr4.2:13656054-13656073 | None:intergenic | 35.0% | |
| ATGTTACTAAAGGATGCCAA+AGG | - | chr4.2:13657477-13657496 | None:intergenic | 35.0% | |
| CAAACTTCTAACTTTCGAAG+GGG | - | chr4.2:13657657-13657676 | None:intergenic | 35.0% | |
| CAACAAGAAACACCCAAAAT+CGG | + | chr4.2:13657120-13657139 | MS.gene08851:CDS | 35.0% | |
| CAGGTGTAGTTAACAAGTTA+AGG | + | chr4.2:13654921-13654940 | MS.gene08851:CDS | 35.0% | |
| CTACTGAGTTCATACATGAA+GGG | - | chr4.2:13656363-13656382 | None:intergenic | 35.0% | |
| CTGAAAACACAAACGGAATT+GGG | + | chr4.2:13657355-13657374 | MS.gene08851:CDS | 35.0% | |
| GCATCAAAGTATATCCCAAA+AGG | + | chr4.2:13656686-13656705 | MS.gene08851:CDS | 35.0% | |
| GTGAAGCAACTAATTCTTTC+AGG | - | chr4.2:13657069-13657088 | None:intergenic | 35.0% | |
| GTTAACAAGTTAAGGAAAGC+TGG | + | chr4.2:13654929-13654948 | MS.gene08851:CDS | 35.0% | |
| GTTTGGAAATGACACATTAC+TGG | + | chr4.2:13656781-13656800 | MS.gene08851:CDS | 35.0% | |
| TAACAAGTTAAGGAAAGCTG+GGG | + | chr4.2:13654931-13654950 | MS.gene08851:CDS | 35.0% | |
| TATGAAAAGGATCAGCCATT+TGG | + | chr4.2:13657540-13657559 | MS.gene08851:CDS | 35.0% | |
| TATGCTATCAACAACAACCT+TGG | + | chr4.2:13654571-13654590 | MS.gene08851:CDS | 35.0% | |
| TCAAAGTATATCCCAAAAGG+TGG | + | chr4.2:13656689-13656708 | MS.gene08851:CDS | 35.0% | |
| TCATGTATGAACTCAGTAGT+AGG | + | chr4.2:13656364-13656383 | MS.gene08851:CDS | 35.0% | |
| TGAATTGAAAAGCCAGATCA+TGG | - | chr4.2:13655087-13655106 | None:intergenic | 35.0% | |
| TGGGTAAGCCTATATATATG+TGG | + | chr4.2:13656456-13656475 | MS.gene08851:intron | 35.0% | |
| TGTTAACCACTGAGCTTATA+GGG | + | chr4.2:13655363-13655382 | MS.gene08851:intron | 35.0% | |
| TGTTAACTGCTTTCTTTGGA+AGG | - | chr4.2:13654645-13654664 | None:intergenic | 35.0% | |
| TTCTTAAATAGAGAAGGCCT+AGG | - | chr4.2:13655880-13655899 | None:intergenic | 35.0% | |
| TTGTTAACCACTGAGCTTAT+AGG | + | chr4.2:13655362-13655381 | MS.gene08851:intron | 35.0% | |
| TTTAAGAAAAAAGTCTGGCC+TGG | + | chr4.2:13655892-13655911 | MS.gene08851:intron | 35.0% | |
| ! | ATAGCAAAATGTCTTTGGAG+AGG | - | chr4.2:13656545-13656564 | None:intergenic | 35.0% |
| ! | CATACATGAAGGGCATAAAA+TGG | - | chr4.2:13656353-13656372 | None:intergenic | 35.0% |
| ! | GACAGTATCAGACTTTTAGA+AGG | - | chr4.2:13655467-13655486 | None:intergenic | 35.0% |
| ! | GTTGCATGGAATACCTATTT+TGG | + | chr4.2:13654814-13654833 | MS.gene08851:CDS | 35.0% |
| ! | TTTTGTATAGGCCTATTTGC+AGG | + | chr4.2:13656591-13656610 | MS.gene08851:intron | 35.0% |
| !! | CTAAAGAAAGATGGATTGAG+AGG | + | chr4.2:13656725-13656744 | MS.gene08851:CDS | 35.0% |
| !! | GGACTTTTTGATAGCTTATG+AGG | + | chr4.2:13655286-13655305 | MS.gene08851:intron | 35.0% |
| !! | GTTGTTGTTGATAGCATAGA+AGG | - | chr4.2:13654569-13654588 | None:intergenic | 35.0% |
| !! | TTTTGGGTGTTTCTTGTTGA+AGG | - | chr4.2:13657119-13657138 | None:intergenic | 35.0% |
| !!! | ACTCACTTTTTTTGGTTGGA+AGG | - | chr4.2:13656116-13656135 | None:intergenic | 35.0% |
| !!! | AGGCATCGACAATTTTGATA+AGG | + | chr4.2:13656652-13656671 | MS.gene08851:CDS | 35.0% |
| !!! | CCGGGTTTTGGATTTTAATT+TGG | - | chr4.2:13654697-13654716 | None:intergenic | 35.0% |
| AAAATTGTCGATGCCTGCTA+TGG | - | chr4.2:13656648-13656667 | None:intergenic | 40.0% | |
| AGCTACACCTAAACACGTTA+AGG | + | chr4.2:13656816-13656835 | MS.gene08851:CDS | 40.0% | |
| AGTAACATACTTGCCATTGG+AGG | + | chr4.2:13657489-13657508 | MS.gene08851:CDS | 40.0% | |
| AGTAGTAGGCATCAAACCAA+CGG | + | chr4.2:13656378-13656397 | MS.gene08851:CDS | 40.0% | |
| ATAAAGCTGACCAAGAGAGA+AGG | + | chr4.2:13654765-13654784 | MS.gene08851:CDS | 40.0% | |
| ATTTGCTTCGGAGGTTTGAA+AGG | + | chr4.2:13657564-13657583 | MS.gene08851:CDS | 40.0% | |
| CAAGGATCATCCAATGTGTA+TGG | - | chr4.2:13656253-13656272 | None:intergenic | 40.0% | |
| GATAAGCTAAACACTACTGC+AGG | + | chr4.2:13654860-13654879 | MS.gene08851:CDS | 40.0% | |
| GATCAAAGTTGCTTGCTCAA+AGG | - | chr4.2:13657622-13657641 | None:intergenic | 40.0% | |
| GCTGAAAACACAAACGGAAT+TGG | + | chr4.2:13657354-13657373 | MS.gene08851:CDS | 40.0% | |
| GGATTGAGAGGAAAGAGATT+GGG | + | chr4.2:13656737-13656756 | MS.gene08851:CDS | 40.0% | |
| TAAGTGGTAGAGTTATAGGC+TGG | + | chr4.2:13655265-13655284 | MS.gene08851:intron | 40.0% | |
| TACACATTGGATGATCCTTG+TGG | + | chr4.2:13656253-13656272 | MS.gene08851:CDS | 40.0% | |
| TACGTTCTTGAAACCATAGC+AGG | + | chr4.2:13656632-13656651 | MS.gene08851:CDS | 40.0% | |
| TAGTCTGGATATCAGTCCAA+TGG | + | chr4.2:13656064-13656083 | MS.gene08851:intron | 40.0% | |
| TCAGATACAGTCCTGCAAAT+AGG | - | chr4.2:13656605-13656624 | None:intergenic | 40.0% | |
| TCGTAGGAGAAACTTGAGTA+TGG | + | chr4.2:13657312-13657331 | MS.gene08851:intron | 40.0% | |
| TCGTGATCAATGTTCATAGC+TGG | - | chr4.2:13657267-13657286 | None:intergenic | 40.0% | |
| TGATGCTGTGGTAATACCTT+TGG | + | chr4.2:13657458-13657477 | MS.gene08851:CDS | 40.0% | |
| TGGATTGAGAGGAAAGAGAT+TGG | + | chr4.2:13656736-13656755 | MS.gene08851:CDS | 40.0% | |
| TGGGGCTATTATATTAGGGA+AGG | + | chr4.2:13654949-13654968 | MS.gene08851:CDS | 40.0% | |
| TGGTCACATTACAGGTCTAA+TGG | + | chr4.2:13654986-13655005 | MS.gene08851:CDS | 40.0% | |
| TGTGCAGAATCCATACACAT+TGG | + | chr4.2:13656240-13656259 | MS.gene08851:intron | 40.0% | |
| TGTTCCAGCAGGATATGAAA+AGG | + | chr4.2:13657527-13657546 | MS.gene08851:CDS | 40.0% | |
| TTAACTACACCTGCATCTCT+TGG | - | chr4.2:13654914-13654933 | None:intergenic | 40.0% | |
| TTCTTCAAAATCAGGCGAAG+AGG | + | chr4.2:13656935-13656954 | MS.gene08851:intron | 40.0% | |
| TTTGCTGCTACTGATATTGC+CGG | - | chr4.2:13656292-13656311 | None:intergenic | 40.0% | |
| TTTGCTTCGGAGGTTTGAAA+GGG | + | chr4.2:13657565-13657584 | MS.gene08851:CDS | 40.0% | |
| ! | AAGGGAGTGTAACTAGTAGA+AGG | - | chr4.2:13654550-13654569 | None:intergenic | 40.0% |
| ! | AATTGAGCATAGCCACCTTT+TGG | - | chr4.2:13656704-13656723 | None:intergenic | 40.0% |
| ! | AATTTGGTGACTGTGTCACT+TGG | + | chr4.2:13656310-13656329 | MS.gene08851:CDS | 40.0% |
| ! | ATTGAGCATAGCCACCTTTT+GGG | - | chr4.2:13656703-13656722 | None:intergenic | 40.0% |
| ! | CACCTAAGAAGAGATTAGTC+TGG | + | chr4.2:13656049-13656068 | MS.gene08851:intron | 40.0% |
| ! | CAGCCATTTGGAATTTGCTT+CGG | + | chr4.2:13657552-13657571 | MS.gene08851:CDS | 40.0% |
| ! | TCCAATACTCCTTTGAGAAC+CGG | - | chr4.2:13654716-13654735 | None:intergenic | 40.0% |
| ! | TGATCCTTTTCATATCCTGC+TGG | - | chr4.2:13657534-13657553 | None:intergenic | 40.0% |
| !! | AGCTTAAGAGGCTTTTTGAG+AGG | + | chr4.2:13655812-13655831 | MS.gene08851:intron | 40.0% |
| !! | TATCAGACTTTTAGAAGGCC+AGG | - | chr4.2:13655462-13655481 | None:intergenic | 40.0% |
| AAATATGGCAGGCCAGACTT+AGG | - | chr4.2:13655425-13655444 | None:intergenic | 45.0% | |
| AACCACTGAGCTTATAGGGA+TGG | + | chr4.2:13655367-13655386 | MS.gene08851:intron | 45.0% | |
| AACTTAAAAGGTCAGGCCAC+AGG | - | chr4.2:13655838-13655857 | None:intergenic | 45.0% | |
| ACAAACTGAACCACACCCAT+TGG | - | chr4.2:13655346-13655365 | None:intergenic | 45.0% | |
| ACCACTGAGCTTATAGGGAT+GGG | + | chr4.2:13655368-13655387 | MS.gene08851:intron | 45.0% | |
| ACTTCTAACTTTCGAAGGGG+AGG | - | chr4.2:13657654-13657673 | None:intergenic | 45.0% | |
| AGCTGTCCCAAAAAAGAGTG+AGG | + | chr4.2:13655208-13655227 | MS.gene08851:intron | 45.0% | |
| AGGGCATAAAATGGAGCCAT+CGG | - | chr4.2:13656344-13656363 | None:intergenic | 45.0% | |
| ATCCAAAACCCGGTTCTCAA+AGG | + | chr4.2:13654704-13654723 | MS.gene08851:CDS | 45.0% | |
| ATCTCCGCTGAACGCATTAA+TGG | + | chr4.2:13655999-13656018 | MS.gene08851:intron | 45.0% | |
| ATGTGACCACTCACTCAAAG+TGG | - | chr4.2:13654975-13654994 | None:intergenic | 45.0% | |
| CCTCCGAAGCAAATTCCAAA+TGG | - | chr4.2:13657558-13657577 | None:intergenic | 45.0% | |
| CTCACCATTAATGCGTTCAG+CGG | - | chr4.2:13656006-13656025 | None:intergenic | 45.0% | |
| CTGAACGCATTAATGGTGAG+GGG | + | chr4.2:13656006-13656025 | MS.gene08851:intron | 45.0% | |
| CTGCAGGCTGAAAACACAAA+CGG | + | chr4.2:13657348-13657367 | MS.gene08851:CDS | 45.0% | |
| GAGCTTATAGGGATGGGAAT+AGG | + | chr4.2:13655374-13655393 | MS.gene08851:intron | 45.0% | |
| GATCCTTGTGGATCAAGTAG+TGG | + | chr4.2:13656265-13656284 | MS.gene08851:CDS | 45.0% | |
| GATTGAGAATCCACTTGCCA+AGG | - | chr4.2:13654591-13654610 | None:intergenic | 45.0% | |
| GCCTCTTAAGCTTATTAGGC+CGG | - | chr4.2:13655804-13655823 | None:intergenic | 45.0% | |
| GCTGAACGCATTAATGGTGA+GGG | + | chr4.2:13656005-13656024 | MS.gene08851:intron | 45.0% | |
| GCTGTCCCAAAAAAGAGTGA+GGG | + | chr4.2:13655209-13655228 | MS.gene08851:intron | 45.0% | |
| GGTTCTCTTTCAAGGTTGCA+TGG | + | chr4.2:13654800-13654819 | MS.gene08851:CDS | 45.0% | |
| GTGTAGTTCCAATTAGCCCA+AGG | + | chr4.2:13656422-13656441 | MS.gene08851:CDS | 45.0% | |
| TATAGGGATGGGAATAGGCT+AGG | + | chr4.2:13655379-13655398 | MS.gene08851:intron | 45.0% | |
| TCAACAACAACCTTGGCAAG+TGG | + | chr4.2:13654578-13654597 | MS.gene08851:CDS | 45.0% | |
| TCTGCTTGTGCTAATGCATC+TGG | - | chr4.2:13654746-13654765 | None:intergenic | 45.0% | |
| TGAAAGAGAACCAGGTGCTT+TGG | - | chr4.2:13654792-13654811 | None:intergenic | 45.0% | |
| TGAGTGAGTGGTCACATTAC+AGG | + | chr4.2:13654978-13654997 | MS.gene08851:CDS | 45.0% | |
| TGCAACCTTGAAAGAGAACC+AGG | - | chr4.2:13654800-13654819 | None:intergenic | 45.0% | |
| TGCTTCACCAGTGAAAAGCT+TGG | + | chr4.2:13657081-13657100 | MS.gene08851:CDS | 45.0% | |
| ! | AAGCACCTGGTTCTCTTTCA+AGG | + | chr4.2:13654792-13654811 | MS.gene08851:CDS | 45.0% |
| ! | ACATCTGCCAAGCTTTTCAC+TGG | - | chr4.2:13657091-13657110 | None:intergenic | 45.0% |
| ! | CCAATACTCCTTTGAGAACC+GGG | - | chr4.2:13654715-13654734 | None:intergenic | 45.0% |
| ! | CCATTTGGAATTTGCTTCGG+AGG | + | chr4.2:13657555-13657574 | MS.gene08851:CDS | 45.0% |
| ! | GCAGGTTCTTTTGCATTGCT+TGG | + | chr4.2:13654878-13654897 | MS.gene08851:CDS | 45.0% |
| ! | GCTTTCTTTGGAAGGCAAGT+TGG | - | chr4.2:13654637-13654656 | None:intergenic | 45.0% |
| ! | GGCAAGTGGATTCTCAATCA+AGG | + | chr4.2:13654592-13654611 | MS.gene08851:CDS | 45.0% |
| ! | TCACTTGGTACTGAAACCGA+TGG | + | chr4.2:13656325-13656344 | MS.gene08851:CDS | 45.0% |
| ! | TTCCACTAGCTTCAGTCCAT+TGG | - | chr4.2:13656083-13656102 | None:intergenic | 45.0% |
| !! | ACTTTTAGAAGGCCAGGCTT+AGG | - | chr4.2:13655456-13655475 | None:intergenic | 45.0% |
| !! | GGTTCTCAAAGGAGTATTGG+AGG | + | chr4.2:13654715-13654734 | MS.gene08851:CDS | 45.0% |
| !! | TTGTGGATCAAGTAGTGGAC+CGG | + | chr4.2:13656270-13656289 | MS.gene08851:CDS | 45.0% |
| !!! | ACTCTTTTTTGGGACAGCTC+TGG | - | chr4.2:13655207-13655226 | None:intergenic | 45.0% |
| AAGAGAGCTAGCACATGCTG+AGG | - | chr4.2:13654507-13654526 | None:intergenic | 50.0% | |
| ACCCAACTGTGTCTTGCCTT+GGG | - | chr4.2:13656441-13656460 | None:intergenic | 50.0% | |
| AGGTCTAATGGAGCTCCTAG+CGG | + | chr4.2:13654998-13655017 | MS.gene08851:CDS | 50.0% | |
| CACTCCAGGATAACCTCCAA+TGG | - | chr4.2:13657505-13657524 | None:intergenic | 50.0% | |
| CGCTGAACGCATTAATGGTG+AGG | + | chr4.2:13656004-13656023 | MS.gene08851:intron | 50.0% | |
| CTACTAGTGAGACCAACCGT+TGG | - | chr4.2:13656397-13656416 | None:intergenic | 50.0% | |
| CTTGCCATTGGAGGTTATCC+TGG | + | chr4.2:13657498-13657517 | MS.gene08851:CDS | 50.0% | |
| GAGAGGAAAGAGATTGGGAG+TGG | + | chr4.2:13656742-13656761 | MS.gene08851:CDS | 50.0% | |
| GCCGGCCTAATAAGCTTAAG+AGG | + | chr4.2:13655800-13655819 | MS.gene08851:intron | 50.0% | |
| GGTCCACTACTTGATCCACA+AGG | - | chr4.2:13656271-13656290 | None:intergenic | 50.0% | |
| GTAGGCATCAAACCAACGGT+TGG | + | chr4.2:13656382-13656401 | MS.gene08851:CDS | 50.0% | |
| GTGCTTTGGTCCTTCTCTCT+TGG | - | chr4.2:13654778-13654797 | None:intergenic | 50.0% | |
| GTGTCTTGCCTTGGGCTAAT+TGG | - | chr4.2:13656433-13656452 | None:intergenic | 50.0% | |
| TACCCAACTGTGTCTTGCCT+TGG | - | chr4.2:13656442-13656461 | None:intergenic | 50.0% | |
| TCAGTAGTGCCAAGAGATGC+AGG | + | chr4.2:13654902-13654921 | MS.gene08851:CDS | 50.0% | |
| TCCCATCCCTATAAGCTCAG+TGG | - | chr4.2:13655372-13655391 | None:intergenic | 50.0% | |
| TCTAACTTTCGAAGGGGAGG+TGG | - | chr4.2:13657651-13657670 | None:intergenic | 50.0% | |
| TGCTAGAGGTGGACAAGGAA+AGG | + | chr4.2:13655027-13655046 | MS.gene08851:CDS | 50.0% | |
| ! | CCCGGTTCTCAAAGGAGTAT+TGG | + | chr4.2:13654712-13654731 | MS.gene08851:CDS | 50.0% |
| ! | GTTGGTCTCACTAGTAGAGC+AGG | + | chr4.2:13656400-13656419 | MS.gene08851:CDS | 50.0% |
| !! | CTCCTTTGAGAACCGGGTTT+TGG | - | chr4.2:13654709-13654728 | None:intergenic | 50.0% |
| !! | GTCCAATGGACTGAAGCTAG+TGG | + | chr4.2:13656078-13656097 | MS.gene08851:intron | 50.0% |
| AACTGCGAAGTTCCCCGACA+AGG | - | chr4.2:13655977-13655996 | None:intergenic | 55.0% | |
| ACAAGGGATGGGAATAGGCC+AGG | - | chr4.2:13655960-13655979 | None:intergenic | 55.0% | |
| ACTGCGAAGTTCCCCGACAA+GGG | - | chr4.2:13655976-13655995 | None:intergenic | 55.0% | |
| AGCCCAAGGCAAGACACAGT+TGG | + | chr4.2:13656436-13656455 | MS.gene08851:CDS | 55.0% | |
| AGGCCAAGCTAGGCTTTGCA+AGG | + | chr4.2:13655399-13655418 | MS.gene08851:intron | 55.0% | |
| AGGCCTTGCAAAGCCTAGCT+TGG | - | chr4.2:13655405-13655424 | None:intergenic | 55.0% | |
| CAGCCTGCAGCATGAGATCT+TGG | - | chr4.2:13657338-13657357 | None:intergenic | 55.0% | |
| CCTATTCCCATCCCTTGTCG+GGG | + | chr4.2:13655962-13655981 | MS.gene08851:intron | 55.0% | |
| CCTGCTGGAACAATCACTCC+AGG | - | chr4.2:13657519-13657538 | None:intergenic | 55.0% | |
| CCTGGAGTGATTGTTCCAGC+AGG | + | chr4.2:13657516-13657535 | MS.gene08851:CDS | 55.0% | |
| CTAATGGAGCTCCTAGCGGT+TGG | + | chr4.2:13655002-13655021 | MS.gene08851:CDS | 55.0% | |
| GAAAAAAGTCTGGCCTGGCC+TGG | + | chr4.2:13655897-13655916 | MS.gene08851:intron | 55.0% | |
| GAAGTTCCCCGACAAGGGAT+GGG | - | chr4.2:13655971-13655990 | None:intergenic | 55.0% | |
| GCCCAAGGCAAGACACAGTT+GGG | + | chr4.2:13656437-13656456 | MS.gene08851:CDS | 55.0% | |
| GCCTATTCCCATCCCTTGTC+GGG | + | chr4.2:13655961-13655980 | MS.gene08851:intron | 55.0% | |
| GGAATAGGCTAGGCCAAGCT+AGG | + | chr4.2:13655389-13655408 | MS.gene08851:intron | 55.0% | |
| GGCCTATTCCCATCCCTTGT+CGG | + | chr4.2:13655960-13655979 | MS.gene08851:intron | 55.0% | |
| GGCTTTGCAAGGCCTAAGTC+TGG | + | chr4.2:13655410-13655429 | MS.gene08851:intron | 55.0% | |
| TGGCCAAGATCTCATGCTGC+AGG | + | chr4.2:13657332-13657351 | MS.gene08851:CDS | 55.0% | |
| ! | GAGAGAAGGACCAAAGCACC+TGG | + | chr4.2:13654779-13654798 | MS.gene08851:CDS | 55.0% |
| ! | GGAAGGCCACTTTGAGTGAG+TGG | + | chr4.2:13654966-13654985 | MS.gene08851:CDS | 55.0% |
| ! | TGGAGTGCTAGAGGTGGACA+AGG | + | chr4.2:13655022-13655041 | MS.gene08851:CDS | 55.0% |
| !! | GAGGCTTTTTGAGAGGCCTG+TGG | + | chr4.2:13655819-13655838 | MS.gene08851:intron | 55.0% |
| CCCCGACAAGGGATGGGAAT+AGG | - | chr4.2:13655965-13655984 | None:intergenic | 60.0% | |
| CCTCTAGCACTCCAACCGCT+AGG | - | chr4.2:13655016-13655035 | None:intergenic | 60.0% | |
| CGAAGTTCCCCGACAAGGGA+TGG | - | chr4.2:13655972-13655991 | None:intergenic | 60.0% | |
| ! | AGCGGTTGGAGTGCTAGAGG+TGG | + | chr4.2:13655016-13655035 | MS.gene08851:CDS | 60.0% |
| ! | CCTAGCGGTTGGAGTGCTAG+AGG | + | chr4.2:13655013-13655032 | MS.gene08851:CDS | 60.0% |
| AATAGGCCAGGCCGGCCTAC+AGG | - | chr4.2:13655948-13655967 | None:intergenic | 65.0% | |
| ATAGGCCAGGCCGGCCTACA+GGG | - | chr4.2:13655947-13655966 | None:intergenic | 65.0% | |
| CCTACGGCCTAGCCTACGAC+AGG | - | chr4.2:13655923-13655942 | None:intergenic | 65.0% | |
| CCTGTCGTAGGCTAGGCCGT+AGG | + | chr4.2:13655920-13655939 | MS.gene08851:intron | 65.0% | |
| GGGATGGGAATAGGCCAGGC+CGG | - | chr4.2:13655956-13655975 | None:intergenic | 65.0% | |
| AGCCTACGACAGGCCAGGCC+AGG | - | chr4.2:13655913-13655932 | None:intergenic | 70.0% | |
| GCTAGGCCGTAGGCCCCTGT+AGG | + | chr4.2:13655930-13655949 | MS.gene08851:intron | 70.0% | |
| GGCCTAGCCTACGACAGGCC+AGG | - | chr4.2:13655918-13655937 | None:intergenic | 70.0% | |
| GGCCTGGCCTGTCGTAGGCT+AGG | + | chr4.2:13655913-13655932 | MS.gene08851:intron | 70.0% | |
| TAGGCCAGGCCGGCCTACAG+GGG | - | chr4.2:13655946-13655965 | None:intergenic | 70.0% | |
| GGCCGGCCTACAGGGGCCTA+CGG | - | chr4.2:13655939-13655958 | None:intergenic | 75.0% | |
| GGCCGTAGGCCCCTGTAGGC+CGG | + | chr4.2:13655934-13655953 | MS.gene08851:intron | 75.0% | |
| GGCCTGGCCTGGCCTGTCGT+AGG | + | chr4.2:13655908-13655927 | MS.gene08851:intron | 75.0% | |
| TAGGCCCCTGTAGGCCGGCC+TGG | + | chr4.2:13655939-13655958 | MS.gene08851:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 13654500 | 13657677 | 13654500 | ID=MS.gene08851 |
| chr4.2 | mRNA | 13654500 | 13657677 | 13654500 | ID=MS.gene08851.t1;Parent=MS.gene08851 |
| chr4.2 | exon | 13654500 | 13655048 | 13654500 | ID=MS.gene08851.t1.exon1;Parent=MS.gene08851.t1 |
| chr4.2 | CDS | 13654500 | 13655048 | 13654500 | ID=cds.MS.gene08851.t1;Parent=MS.gene08851.t1 |
| chr4.2 | exon | 13656247 | 13656458 | 13656247 | ID=MS.gene08851.t1.exon2;Parent=MS.gene08851.t1 |
| chr4.2 | CDS | 13656247 | 13656458 | 13656247 | ID=cds.MS.gene08851.t1;Parent=MS.gene08851.t1 |
| chr4.2 | exon | 13656601 | 13656837 | 13656601 | ID=MS.gene08851.t1.exon3;Parent=MS.gene08851.t1 |
| chr4.2 | CDS | 13656601 | 13656837 | 13656601 | ID=cds.MS.gene08851.t1;Parent=MS.gene08851.t1 |
| chr4.2 | exon | 13656949 | 13657141 | 13656949 | ID=MS.gene08851.t1.exon4;Parent=MS.gene08851.t1 |
| chr4.2 | CDS | 13656949 | 13657141 | 13656949 | ID=cds.MS.gene08851.t1;Parent=MS.gene08851.t1 |
| chr4.2 | exon | 13657318 | 13657677 | 13657318 | ID=MS.gene08851.t1.exon5;Parent=MS.gene08851.t1 |
| chr4.2 | CDS | 13657318 | 13657677 | 13657318 | ID=cds.MS.gene08851.t1;Parent=MS.gene08851.t1 |
| Gene Sequence |
| Protein sequence |
