AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055251


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055251.t1 MTR_7g062540 95.294 680 32 0 1 680 1 680 0.0 1337
MS.gene055251.t1 MTR_4g021580 71.174 673 164 11 13 679 18 666 0.0 904
MS.gene055251.t1 MTR_4g021580 70.270 629 159 9 13 637 18 622 0.0 837
MS.gene055251.t1 MTR_8g027440 55.394 686 245 14 9 677 24 665 0.0 709
MS.gene055251.t1 MTR_2g005240 51.274 667 272 15 9 664 18 642 0.0 613
MS.gene055251.t1 MTR_8g100050 61.968 376 133 7 8 378 53 423 5.80e-153 460
MS.gene055251.t1 MTR_8g100050 61.968 376 133 7 8 378 53 423 4.79e-152 461
MS.gene055251.t1 MTR_8g100050 40.659 182 91 5 495 661 623 802 2.35e-30 128
MS.gene055251.t1 MTR_4g060460 36.775 707 380 20 12 660 52 749 1.62e-135 417
MS.gene055251.t1 MTR_2g018690 49.465 374 179 8 6 373 15 384 4.85e-107 345
MS.gene055251.t1 MTR_2g018690 35.000 120 70 4 560 672 765 883 1.82e-14 77.8
MS.gene055251.t1 MTR_2g093740 44.638 401 202 9 12 395 54 451 8.33e-107 339
MS.gene055251.t1 MTR_2g093740 44.638 401 202 9 12 395 54 451 3.62e-106 339
MS.gene055251.t1 MTR_2g093740 55.882 68 29 1 570 636 682 749 1.53e-17 87.4
MS.gene055251.t1 MTR_2g093740 44.638 401 202 9 12 395 54 451 1.43e-105 339
MS.gene055251.t1 MTR_2g093740 53.261 92 42 1 570 660 682 773 1.17e-24 110
MS.gene055251.t1 MTR_8g079492 48.806 377 176 8 6 373 15 383 3.21e-105 341
MS.gene055251.t1 MTR_8g079492 38.710 93 54 2 569 659 781 872 1.83e-14 77.8
MS.gene055251.t1 MTR_8g079492 48.806 377 176 8 6 373 15 383 3.31e-105 341
MS.gene055251.t1 MTR_8g079492 38.710 93 54 2 569 659 780 871 1.81e-14 77.8
MS.gene055251.t1 MTR_5g076270 50.144 347 165 6 6 346 16 360 1.23e-104 338
MS.gene055251.t1 MTR_5g076270 40.506 79 45 1 581 657 725 803 1.33e-13 74.7
MS.gene055251.t1 MTR_3g064050 45.192 416 211 10 11 418 23 429 4.25e-104 336
MS.gene055251.t1 MTR_3g064050 38.298 94 55 2 566 657 719 811 2.51e-13 73.9
MS.gene055251.t1 MTR_4g088210 43.133 415 197 9 14 401 38 440 6.41e-104 332
MS.gene055251.t1 MTR_4g060460 45.528 369 182 7 12 365 52 416 6.42e-104 335
MS.gene055251.t1 MTR_4g060460 42.857 140 74 3 527 660 615 754 5.62e-26 114
MS.gene055251.t1 MTR_4g088210 43.133 415 197 9 14 401 38 440 7.81e-104 332
MS.gene055251.t1 MTR_2g093740 43.237 414 202 10 12 395 54 464 7.15e-103 330
MS.gene055251.t1 MTR_2g093740 43.237 414 202 10 12 395 54 464 2.75e-102 329
MS.gene055251.t1 MTR_2g093740 55.882 68 29 1 570 636 695 762 1.80e-17 87.0
MS.gene055251.t1 MTR_2g093740 43.237 414 202 10 12 395 54 464 5.15e-102 330
MS.gene055251.t1 MTR_2g093740 53.261 92 42 1 570 660 695 786 1.14e-24 110
MS.gene055251.t1 MTR_2g014770 45.082 366 178 7 14 366 53 408 9.37e-94 303
MS.gene055251.t1 MTR_2g014770 42.716 405 201 9 14 397 53 447 2.09e-93 304
MS.gene055251.t1 MTR_1g024025 46.705 349 179 5 1 344 30 376 2.98e-92 311
MS.gene055251.t1 MTR_1g024025 43.299 97 51 3 570 663 754 849 6.03e-15 79.3
MS.gene055251.t1 MTR_4g124900 45.745 376 190 9 6 374 15 383 3.91e-88 298
MS.gene055251.t1 MTR_4g124900 46.154 91 46 2 570 658 970 1059 1.40e-17 87.8
MS.gene055251.t1 MTR_4g124900 45.745 376 190 9 6 374 15 383 4.29e-88 298
MS.gene055251.t1 MTR_4g124900 46.154 91 46 2 570 658 993 1082 1.37e-17 87.8
MS.gene055251.t1 MTR_2g043250 46.839 348 175 7 6 347 15 358 6.82e-88 298
MS.gene055251.t1 MTR_2g043250 43.269 104 52 3 570 667 986 1088 1.13e-17 88.2
MS.gene055251.t1 MTR_8g101360 46.334 341 175 6 14 348 31 369 6.23e-84 286
MS.gene055251.t1 MTR_8g101360 48.352 91 44 2 570 658 984 1073 1.23e-18 91.3
MS.gene055251.t1 MTR_8g079492 48.860 307 140 8 76 373 3 301 2.67e-80 272
MS.gene055251.t1 MTR_8g079492 38.710 93 54 2 569 659 698 789 1.65e-14 77.8
MS.gene055251.t1 MTR_2g093740 45.578 294 152 6 108 395 30 321 8.82e-78 261
MS.gene055251.t1 MTR_2g093740 55.882 68 29 1 570 636 552 619 1.32e-17 87.4
MS.gene055251.t1 MTR_2g093740 45.578 294 152 6 108 395 30 321 1.72e-77 261
MS.gene055251.t1 MTR_2g093740 53.261 92 42 1 570 660 552 643 8.06e-25 110
MS.gene055251.t1 MTR_2g093740 43.648 307 152 7 108 395 30 334 4.01e-74 251
MS.gene055251.t1 MTR_2g093740 55.882 68 29 1 570 636 565 632 1.51e-17 87.0
MS.gene055251.t1 MTR_2g093740 43.648 307 152 7 108 395 30 334 7.30e-74 252
MS.gene055251.t1 MTR_2g093740 53.261 92 42 1 570 660 565 656 9.43e-25 110
MS.gene055251.t1 MTR_2g094570 37.101 407 207 9 8 373 5 403 1.39e-69 239
MS.gene055251.t1 MTR_2g094570 37.101 407 207 9 8 373 5 403 1.85e-69 240
MS.gene055251.t1 MTR_2g094570 37.101 407 207 9 8 373 61 459 4.29e-69 240
MS.gene055251.t1 MTR_8g446900 40.062 322 177 8 56 372 3 313 3.19e-68 228
MS.gene055251.t1 MTR_4g058930 35.616 438 210 13 3 379 1 427 2.63e-66 231
MS.gene055251.t1 MTR_4g058930 35.616 438 210 13 3 379 1 427 4.07e-66 231
MS.gene055251.t1 MTR_7g101280 34.300 414 207 12 14 371 31 435 4.50e-62 219
MS.gene055251.t1 MTR_0041s0110 34.300 414 207 12 14 371 31 435 4.50e-62 219
MS.gene055251.t1 MTR_1g094960 35.680 412 208 12 3 369 8 407 2.20e-60 213
MS.gene055251.t1 MTR_3g073420 34.382 445 236 14 11 414 16 445 3.84e-59 209
MS.gene055251.t1 MTR_5g040880 35.088 342 196 8 13 346 10 333 3.05e-56 200
MS.gene055251.t1 MTR_5g061220 31.980 394 220 11 14 375 19 396 2.38e-54 195
MS.gene055251.t1 MTR_7g101275 37.582 306 178 7 24 323 2 300 1.48e-53 189
MS.gene055251.t1 MTR_5g082140 32.162 370 227 7 3 363 1 355 3.22e-52 187
MS.gene055251.t1 MTR_2g024430 33.425 365 203 13 14 363 20 359 1.13e-49 182
MS.gene055251.t1 MTR_1g064430 45.894 207 102 3 14 215 27 228 4.05e-49 183
MS.gene055251.t1 MTR_1g064430 45.894 207 102 3 14 215 40 241 5.40e-49 183
MS.gene055251.t1 MTR_1g058210 31.564 358 228 9 14 366 12 357 1.26e-47 174
MS.gene055251.t1 MTR_0041s0120 33.333 321 183 9 24 323 2 312 1.07e-42 160
MS.gene055251.t1 MTR_5g040740 33.133 332 174 11 14 325 12 315 4.84e-42 158
MS.gene055251.t1 MTR_5g060780 29.722 360 229 11 14 366 12 354 1.86e-38 147
MS.gene055251.t1 MTR_2g006380 28.238 386 237 13 11 383 17 375 5.75e-38 147
MS.gene055251.t1 MTR_5g460920 29.834 362 226 13 14 366 12 354 8.56e-38 145
MS.gene055251.t1 MTR_2g006270 27.930 401 263 9 14 404 13 397 1.05e-37 146
MS.gene055251.t1 MTR_5g061890 29.248 359 232 9 14 366 12 354 3.19e-37 144
MS.gene055251.t1 MTR_5g060630 27.344 384 229 12 14 357 12 385 3.00e-35 140
MS.gene055251.t1 MTR_5g460740 27.344 384 229 12 14 357 12 385 3.00e-35 140
MS.gene055251.t1 MTR_5g062970 34.951 206 126 3 14 216 38 238 2.35e-34 131
MS.gene055251.t1 MTR_3g064050 38.806 201 108 8 224 418 1 192 1.31e-25 112
MS.gene055251.t1 MTR_3g064050 38.298 94 55 2 566 657 482 574 2.09e-13 73.9
MS.gene055251.t1 MTR_5g074840 52.222 90 41 1 178 265 58 147 3.39e-20 88.6
MS.gene055251.t1 MTR_8g014520 31.250 112 55 1 573 662 158 269 9.69e-13 69.3
MS.gene055251.t1 MTR_8g014520 31.193 109 53 1 573 659 158 266 5.05e-12 67.4
MS.gene055251.t1 MTR_1g085750 35.955 89 48 2 568 648 81 168 3.42e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055251.t1 AT4G23980 56.866 670 225 16 2 663 1 614 0.0 687
MS.gene055251.t1 AT4G23980 56.716 670 228 16 2 663 1 616 0.0 686
MS.gene055251.t1 AT1G59750 48.977 684 261 17 9 667 17 637 0.0 597
MS.gene055251.t1 AT1G59750 49.118 680 269 17 9 667 17 640 0.0 595
MS.gene055251.t1 AT1G59750 49.118 680 269 17 9 667 17 640 0.0 595
MS.gene055251.t1 AT1G35540 44.162 668 282 15 5 663 18 603 0.0 545
MS.gene055251.t1 AT1G34410 44.613 659 275 12 5 654 18 595 0.0 545
MS.gene055251.t1 AT3G61830 70.637 361 101 3 8 365 19 377 0.0 535
MS.gene055251.t1 AT3G61830 51.412 177 53 6 493 667 439 584 9.43e-41 158
MS.gene055251.t1 AT2G46530 71.038 366 100 4 8 370 15 377 0.0 534
MS.gene055251.t1 AT2G46530 62.264 106 39 1 558 663 479 583 1.95e-35 142
MS.gene055251.t1 AT2G46530 71.038 366 100 4 8 370 36 398 0.0 533
MS.gene055251.t1 AT2G46530 62.264 106 39 1 558 663 500 604 2.62e-35 142
MS.gene055251.t1 AT1G35520 44.822 647 267 12 11 648 24 589 0.0 533
MS.gene055251.t1 AT1G34310 44.700 651 274 13 5 648 18 589 0.0 533
MS.gene055251.t1 AT1G35240 44.343 654 270 14 5 654 18 581 0.0 532
MS.gene055251.t1 AT1G34390 44.854 651 271 13 5 648 18 587 3.30e-178 520
MS.gene055251.t1 AT1G59750 65.014 363 121 4 9 367 17 377 2.24e-165 490
MS.gene055251.t1 AT1G59750 42.051 195 91 7 485 667 451 635 5.02e-33 135
MS.gene055251.t1 AT3G61830 70.122 328 93 3 41 365 1 326 3.90e-161 475
MS.gene055251.t1 AT3G61830 51.412 177 53 6 493 667 388 533 4.69e-41 158
MS.gene055251.t1 AT5G62000 63.361 363 124 6 8 365 55 413 8.34e-159 479
MS.gene055251.t1 AT5G62000 38.528 231 120 8 462 673 609 836 9.41e-36 145
MS.gene055251.t1 AT5G62000 63.361 363 124 6 8 365 55 413 8.34e-159 479
MS.gene055251.t1 AT5G62000 38.528 231 120 8 462 673 609 836 9.41e-36 145
MS.gene055251.t1 AT5G62000 63.361 363 124 6 8 365 55 413 8.34e-159 479
MS.gene055251.t1 AT5G62000 38.528 231 120 8 462 673 609 836 9.41e-36 145
MS.gene055251.t1 AT5G62000 63.361 363 124 6 8 365 55 413 8.34e-159 479
MS.gene055251.t1 AT5G62000 38.528 231 120 8 462 673 609 836 9.41e-36 145
MS.gene055251.t1 AT5G62000 63.361 363 124 6 8 365 55 413 1.96e-158 478
MS.gene055251.t1 AT5G62000 38.696 230 119 8 462 672 609 835 3.12e-35 143
MS.gene055251.t1 AT2G46530 68.858 289 83 4 86 370 5 290 2.18e-132 400
MS.gene055251.t1 AT2G46530 62.264 106 39 1 558 663 392 496 6.64e-36 142
MS.gene055251.t1 AT1G34170 40.499 521 229 14 2 501 1 461 4.96e-121 370
MS.gene055251.t1 AT1G34170 38.388 521 214 15 2 501 1 435 3.37e-106 331
MS.gene055251.t1 AT1G30330 45.622 434 214 12 6 429 15 436 1.28e-105 342
MS.gene055251.t1 AT1G30330 39.583 96 55 2 564 657 788 882 1.12e-14 78.6
MS.gene055251.t1 AT1G30330 45.622 434 214 12 6 429 17 438 1.41e-105 342
MS.gene055251.t1 AT1G30330 39.583 96 55 2 564 657 790 884 1.11e-14 78.6
MS.gene055251.t1 AT1G30330 45.622 434 214 12 6 429 17 438 1.41e-105 342
MS.gene055251.t1 AT1G30330 39.583 96 55 2 564 657 790 884 1.11e-14 78.6
MS.gene055251.t1 AT5G37020 47.301 389 191 10 6 384 12 396 2.19e-105 338
MS.gene055251.t1 AT5G37020 32.639 144 84 6 496 636 639 772 4.39e-11 66.6
MS.gene055251.t1 AT1G34170 38.388 521 214 15 2 501 1 435 4.16e-105 330
MS.gene055251.t1 AT1G34170 64.835 91 32 0 573 663 436 526 6.78e-34 137
MS.gene055251.t1 AT5G37020 47.301 389 191 10 6 384 12 396 7.63e-105 337
MS.gene055251.t1 AT5G37020 34.545 165 95 6 496 657 639 793 2.56e-16 83.6
MS.gene055251.t1 AT5G60450 45.889 377 183 10 3 364 30 400 3.39e-100 324
MS.gene055251.t1 AT5G60450 43.333 120 64 2 555 673 626 742 7.59e-25 110
MS.gene055251.t1 AT5G60450 46.612 369 176 10 11 364 62 424 4.11e-99 322
MS.gene055251.t1 AT5G60450 43.333 120 64 2 555 673 650 766 8.63e-25 110
MS.gene055251.t1 AT1G19850 47.941 340 163 7 14 344 43 377 3.11e-94 311
MS.gene055251.t1 AT1G19850 44.330 97 50 4 570 663 782 877 1.56e-15 81.3
MS.gene055251.t1 AT1G19850 47.941 340 163 7 14 344 54 388 3.26e-94 311
MS.gene055251.t1 AT1G19850 44.330 97 50 4 570 663 793 888 1.59e-15 81.3
MS.gene055251.t1 AT2G33860 39.817 437 235 9 14 431 54 481 1.19e-92 300
MS.gene055251.t1 AT5G20730 45.902 366 186 8 6 366 16 374 6.11e-88 298
MS.gene055251.t1 AT5G20730 46.154 91 46 3 570 658 1037 1126 5.22e-17 86.3
MS.gene055251.t1 AT5G20730 45.777 367 186 8 6 366 16 375 1.14e-87 298
MS.gene055251.t1 AT5G20730 46.154 91 46 3 570 658 1038 1127 5.14e-17 86.3
MS.gene055251.t1 AT5G20730 45.777 367 186 8 6 366 16 375 1.40e-87 298
MS.gene055251.t1 AT5G20730 46.154 91 46 3 570 658 1038 1127 5.31e-17 86.3
MS.gene055251.t1 AT1G19220 45.600 375 190 9 4 369 13 382 2.19e-87 296
MS.gene055251.t1 AT1G19220 46.078 102 48 3 559 658 951 1047 6.19e-19 92.4
MS.gene055251.t1 AT5G37020 48.410 283 136 7 108 384 23 301 2.01e-74 254
MS.gene055251.t1 AT5G37020 34.545 165 95 6 496 657 544 698 1.97e-16 84.0
MS.gene055251.t1 AT1G43950 53.302 212 91 4 5 215 18 222 4.00e-70 228
MS.gene055251.t1 AT2G33860 40.308 325 183 5 116 431 2 324 2.74e-68 231
MS.gene055251.t1 AT4G30080 35.523 411 210 11 3 367 8 409 2.94e-65 228
MS.gene055251.t1 AT2G28350 36.829 410 201 10 7 367 3 403 4.86e-65 227
MS.gene055251.t1 AT2G28350 36.829 410 201 10 7 367 3 403 5.58e-65 228
MS.gene055251.t1 AT1G77850 30.660 424 236 12 10 391 15 422 2.69e-51 187
MS.gene055251.t1 AT1G77850 30.660 424 236 12 10 391 15 422 3.48e-51 187
MS.gene055251.t1 AT5G25890 34.884 86 56 0 573 658 83 168 2.51e-13 69.3
MS.gene055251.t1 AT3G17600 41.026 78 44 1 573 648 75 152 3.41e-11 62.4
MS.gene055251.t1 AT3G16500 32.143 112 58 2 561 654 142 253 6.11e-11 63.9
MS.gene055251.t1 AT3G16500 34.000 100 48 2 573 654 154 253 6.27e-11 63.9

Find 154 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGTGACGTTCCAGATTT+TGG 0.157571 7.4:-41245128 MS.gene055251:intron
TTGAGATATCAAACTTATTT+TGG 0.174168 7.4:+41244408 None:intergenic
GACTCTACTTACTGGGAAAA+TGG 0.200322 7.4:-41244881 MS.gene055251:CDS
ATGCCTTCATCTGTGATTTC+TGG 0.218236 7.4:-41246041 MS.gene055251:CDS
AGATCCATCCTAGGAATAAA+TGG 0.234682 7.4:-41244011 MS.gene055251:CDS
TGTTGTCAATGTTCATTTAC+TGG 0.249472 7.4:-41247638 MS.gene055251:intron
CACACTGGTTGAATTCAAAA+TGG 0.280634 7.4:-41245393 MS.gene055251:CDS
TGATCAACTTATTGATGAAT+TGG 0.289870 7.4:-41244058 MS.gene055251:CDS
CTCCTGCTGCAAAATATAAA+AGG 0.298744 7.4:-41245160 MS.gene055251:CDS
TCCGCTTCCTTACCAAAATC+TGG 0.302105 7.4:+41245116 None:intergenic
TTGCTGAAGGAGTGAGTTCT+TGG 0.304040 7.4:+41246942 None:intergenic
TTGTAGGGAATTCTGCAATA+TGG 0.326044 7.4:-41243723 MS.gene055251:intron
TATAAGTGTGAATAAGTATA+TGG 0.342092 7.4:-41245826 MS.gene055251:CDS
CAGTAGGTGACTCTACTTAC+TGG 0.347101 7.4:-41244889 MS.gene055251:CDS
TAGTGATGAGATAGGTAATT+TGG 0.349545 7.4:+41243646 None:intergenic
TACATCCTTACATTAGATTC+TGG 0.353577 7.4:+41247106 None:intergenic
TGCTTGCTTTGTGTTTCATT+TGG 0.354289 7.4:+41244344 None:intergenic
AAGGAGTGAGTTCTTGGTCT+TGG 0.354402 7.4:+41246948 None:intergenic
CTTAGTGCAACTTCTGCTAT+TGG 0.357778 7.4:+41244319 None:intergenic
ATTCCTGAGTTGGAGTAGAT+TGG 0.370432 7.4:+41246730 None:intergenic
CGTCGACACTTGCTCACAAC+TGG 0.370955 7.4:-41246309 MS.gene055251:CDS
ACAATTTCCCATTTATTCCT+AGG 0.375607 7.4:+41244003 None:intergenic
ATCTACTCCAACTCAGGAAT+TGG 0.380361 7.4:-41246727 MS.gene055251:CDS
TATATTCTCATCAGGTTCAA+TGG 0.382829 7.4:-41245271 MS.gene055251:intron
GAGTATGCAGCAAATGTATT+TGG 0.391054 7.4:-41244482 MS.gene055251:CDS
TATTCACACTTATAATGAAC+TGG 0.400736 7.4:+41245835 None:intergenic
GCTACAAGCTATAGATTGTT+CGG 0.410276 7.4:-41244548 MS.gene055251:CDS
TCCCATGGTGAAATTCTATC+AGG 0.415551 7.4:+41245224 None:intergenic
GTTAGAAGTATCAACAAATC+AGG 0.423287 7.4:-41247713 MS.gene055251:CDS
GGACAAGGATCAAGGCTTGT+AGG 0.425783 7.4:+41246981 None:intergenic
CAATGATCATTTGACTGATC+AGG 0.428654 7.4:-41244597 MS.gene055251:CDS
CTACAAGCTATAGATTGTTC+GGG 0.430637 7.4:-41244547 MS.gene055251:CDS
CTTGGTCTTGGAGGTTCGGC+AGG 0.433704 7.4:+41246960 None:intergenic
ATGAACTCTATGAACAGTTA+TGG 0.434802 7.4:-41248000 MS.gene055251:CDS
AGTTCTTGGTCTTGGAGGTT+CGG 0.435328 7.4:+41246956 None:intergenic
GAGTGAGTTCTTGGTCTTGG+AGG 0.436921 7.4:+41246951 None:intergenic
GTTTCTTCTAGTGATGAGAT+AGG 0.438418 7.4:+41243638 None:intergenic
TTCCTGAGTTGGAGTAGATT+GGG 0.444751 7.4:+41246731 None:intergenic
GATGAAGGCATGCAGCTTTG+TGG 0.446909 7.4:+41246053 None:intergenic
TGTGTTTCATTTGGAGATAT+CGG 0.452653 7.4:+41244353 None:intergenic
GATTATGTTATTACCAGTGA+TGG 0.454300 7.4:+41246846 None:intergenic
CACTTTAAGCATATATTTCG+AGG 0.457499 7.4:-41246675 MS.gene055251:intron
TGGTCCTTCTCATTTGTGTC+AGG 0.459330 7.4:-41244696 MS.gene055251:CDS
GGAATGACGGTATGCATTTG+TGG 0.463307 7.4:-41244805 MS.gene055251:CDS
AGCACAATGATGATGAATAA+TGG 0.463577 7.4:-41248031 None:intergenic
GCTGCATACTCGGACACCTT+AGG 0.463588 7.4:+41244494 None:intergenic
GGTGAAATTCTATCAGGTCT+TGG 0.465108 7.4:+41245230 None:intergenic
CGTAGGAGCAGAAGCCAGAA+GGG 0.466622 7.4:+41245193 None:intergenic
CCAAAATCTGGAACGTCACT+AGG 0.476389 7.4:+41245128 None:intergenic
AACTCAGGAATTGGTTGCTA+AGG 0.479871 7.4:-41246718 MS.gene055251:CDS
ATATTCTCATCAGGTTCAAT+GGG 0.480064 7.4:-41245270 MS.gene055251:intron
ACTCTACTTACTGGGAAAAT+GGG 0.480110 7.4:-41244880 MS.gene055251:CDS
CACAGAATGCCTTCCATCAC+TGG 0.481144 7.4:-41246859 MS.gene055251:intron
TCAAATGCAGGGTGTTGCAG+TGG 0.481218 7.4:-41244115 MS.gene055251:CDS
AACACGACAAAGGATCTTGT+TGG 0.481262 7.4:+41247657 None:intergenic
GGAGAAGCTGTTTGACATGA+AGG 0.481393 7.4:-41244037 MS.gene055251:CDS
ATGGGAGATAGAACCCCTTC+TGG 0.482103 7.4:-41245207 MS.gene055251:CDS
ATGTTATGTCTGAAAACATA+AGG 0.482213 7.4:-41244826 MS.gene055251:CDS
TTTCCCATTTATTCCTAGGA+TGG 0.483618 7.4:+41244007 None:intergenic
CATGTTGAAGTTCCTCGTGC+TGG 0.488356 7.4:-41247959 MS.gene055251:CDS
TTAGCAACCAATTCCTGAGT+TGG 0.491444 7.4:+41246720 None:intergenic
CTGTCAAAAGGTTCAAATGC+AGG 0.492047 7.4:-41244127 MS.gene055251:intron
GGAATCTGACTGGCGGAAGT+TGG 0.494408 7.4:-41244739 MS.gene055251:CDS
GATCCATCCTAGGAATAAAT+GGG 0.495100 7.4:-41244010 MS.gene055251:CDS
GATGTGCACAAAATGAGCTC+AGG 0.496139 7.4:-41243671 MS.gene055251:CDS
ACACGACAAAGGATCTTGTT+GGG 0.504393 7.4:+41247658 None:intergenic
AAATACATTTGCTGCATACT+CGG 0.507640 7.4:+41244484 None:intergenic
CTGCAAAATATAAAAGGCCT+AGG 0.510234 7.4:-41245154 MS.gene055251:CDS
GTCCCAATCTACTCCAACTC+AGG 0.512152 7.4:-41246733 MS.gene055251:CDS
GTCTGCATCAGTTCTTGACA+TGG 0.513254 7.4:+41244430 None:intergenic
TCTCAAAGGCTTCAAAAGAA+AGG 0.513575 7.4:-41244391 MS.gene055251:CDS
CAGCATGAGACGCGGTTGCA+AGG 0.515240 7.4:+41245997 None:intergenic
TAGCAAGAGTGTCGCAGTCT+CGG 0.516524 7.4:-41244660 MS.gene055251:CDS
TGTTGCAGTGGGTCGTGCGG+TGG 0.520688 7.4:-41244103 MS.gene055251:CDS
AACTCTGATACAAGTACTCA+TGG 0.524293 7.4:-41246909 MS.gene055251:CDS
GTTCGGCAGGACAAGGATCA+AGG 0.528735 7.4:+41246973 None:intergenic
ATTGTCTTCACTGATGATGA+AGG 0.528983 7.4:-41243985 MS.gene055251:CDS
TGACCAGAAATCACAGATGA+AGG 0.529054 7.4:+41246038 None:intergenic
TTGTAGTATACTACAAGCCC+AGG 0.533426 7.4:-41245956 MS.gene055251:intron
CTTGGAGGTTCGGCAGGACA+AGG 0.533568 7.4:+41246966 None:intergenic
TAAAGAGATACTCACGGCCA+TGG 0.533691 7.4:+41243937 None:intergenic
AGGATCTTCACAATTATGAA+TGG 0.534136 7.4:-41246698 MS.gene055251:CDS
ATTATTAACTTGTATTACAT+CGG 0.535796 7.4:+41244847 None:intergenic
GAAGGGGATATGATGCTTGT+TGG 0.542834 7.4:-41243967 MS.gene055251:CDS
AGAGTGTCGCAGTCTCGGCT+TGG 0.549847 7.4:-41244655 MS.gene055251:CDS
GAGATACGTTTGTGTTTCTG+AGG 0.554208 7.4:-41246248 MS.gene055251:intron
TCGTAGGAGCAGAAGCCAGA+AGG 0.562413 7.4:+41245192 None:intergenic
CTATCTTCTCCTCATTCAAG+TGG 0.562928 7.4:-41244716 MS.gene055251:CDS
GACACTTGCTCACAACTGGA+TGG 0.564774 7.4:-41246305 MS.gene055251:CDS
GAGAATTACGCGTTGGCGTG+AGG 0.565139 7.4:-41246088 MS.gene055251:CDS
TTTGACTGATCAGGTTGTCA+AGG 0.566250 7.4:-41244588 MS.gene055251:CDS
CAATAGCAGAAGTTGCACTA+AGG 0.566869 7.4:-41244318 MS.gene055251:intron
TGGCACAATAATTGGACAAG+AGG 0.567142 7.4:-41245425 MS.gene055251:CDS
TTGTCTTCACTGATGATGAA+GGG 0.569768 7.4:-41243984 MS.gene055251:CDS
TTCAAAATGGAGATCACTCA+AGG 0.575917 7.4:-41245380 MS.gene055251:intron
GTTAGTTAAGACCTTGCTGA+AGG 0.576070 7.4:+41246929 None:intergenic
TGAAGGGACAGATCCATCCT+AGG 0.576311 7.4:-41244020 MS.gene055251:CDS
ACGCGGTTGCAAGGACTCCA+AGG 0.576436 7.4:+41246006 None:intergenic
ACTGATAATAGCAGCAGCAA+TGG 0.577521 7.4:-41244770 MS.gene055251:CDS
GGAACGTCACTAGGTAGCCT+AGG 0.578373 7.4:+41245137 None:intergenic
GGTTGTCAAGGAGAACAAAA+CGG 0.580030 7.4:-41244576 MS.gene055251:CDS
TGAGAAGGACCACTTGAATG+AGG 0.580259 7.4:+41244707 None:intergenic
AGTAGGTGACTCTACTTACT+GGG 0.580726 7.4:-41244888 MS.gene055251:CDS
ATTCTCCTGAGACTGACAAA+AGG 0.581364 7.4:-41245743 MS.gene055251:intron
CACAATGGAGAATTACGCGT+TGG 0.583091 7.4:-41246095 MS.gene055251:CDS
TCCTCGCACGAACACTCCTA+AGG 0.585464 7.4:-41244510 MS.gene055251:CDS
GTGGACTTGACCGCGTTGGA+TGG 0.587025 7.4:-41244084 MS.gene055251:CDS
CAAATGCAGGGTGTTGCAGT+GGG 0.591983 7.4:-41244114 MS.gene055251:CDS
TTGTTGGGAAGTTTGAACAA+TGG 0.592548 7.4:+41247673 None:intergenic
ATGTTATTACCAGTGATGGA+AGG 0.593428 7.4:+41246850 None:intergenic
GTATTTGGAGTCACCTCTGA+GGG 0.593824 7.4:-41244467 MS.gene055251:CDS
ATCAGTTCTTGACATGGGAG+CGG 0.595334 7.4:+41244436 None:intergenic
GCAGGAGGTTGAATAGTCGT+AGG 0.595409 7.4:+41245176 None:intergenic
ACTTGTTCCATGTGTCCTTG+AGG 0.595417 7.4:+41247917 None:intergenic
TGTCAAAAGGTTCAAATGCA+GGG 0.595922 7.4:-41244126 MS.gene055251:intron
TCTGCATCAGTTCTTGACAT+GGG 0.598480 7.4:+41244431 None:intergenic
GAGAAGCTGTTTGACATGAA+GGG 0.603135 7.4:-41244036 MS.gene055251:CDS
AAATAAGTTTGATATCTCAA+AGG 0.603379 7.4:-41244405 MS.gene055251:CDS
TGCTTGTTGGTGATGATCCA+TGG 0.605617 7.4:-41243954 MS.gene055251:CDS
AAGAGGATATTTCTTCACAC+TGG 0.605848 7.4:-41245408 MS.gene055251:CDS
ATGTGCACAAAATGAGCTCA+GGG 0.609204 7.4:-41243670 MS.gene055251:CDS
TGTCTTCACTGATGATGAAG+GGG 0.610189 7.4:-41243983 MS.gene055251:CDS
ACCTGATAGAATTTCACCAT+GGG 0.610284 7.4:-41245225 MS.gene055251:CDS
TCTGAAAACATAAGGAATGA+CGG 0.610544 7.4:-41244818 MS.gene055251:CDS
TGCGACACTCTTGCTATCGT+CGG 0.614271 7.4:+41244667 None:intergenic
TGCGGTGGACTTGACCGCGT+TGG 0.615624 7.4:-41244088 MS.gene055251:CDS
AGAAGGGGTTCTATCTCCCA+TGG 0.616888 7.4:+41245209 None:intergenic
ACCTTAGGAGTGTTCGTGCG+AGG 0.624847 7.4:+41244509 None:intergenic
GGGTGTTGCAGTGGGTCGTG+CGG 0.626070 7.4:-41244106 MS.gene055251:CDS
CAGTTATGGAAAGCTTGTGC+TGG 0.627540 7.4:-41247986 MS.gene055251:CDS
GAACATTGACAACACGACAA+AGG 0.628833 7.4:+41247647 None:intergenic
CAAATCAGGAACTAAATCAG+AGG 0.630877 7.4:-41247699 MS.gene055251:CDS
TCTGGTCAGAGCATGCACCT+TGG 0.631687 7.4:-41246023 MS.gene055251:CDS
CAGTGATGGAAGGCATTCTG+TGG 0.636814 7.4:+41246860 None:intergenic
GGTTTATGCACAGATAACTC+TGG 0.642878 7.4:-41247131 MS.gene055251:CDS
GGTTTATCGAGGAATCTGAC+TGG 0.644639 7.4:-41244749 MS.gene055251:CDS
GTGTCCTGACACAAATGAGA+AGG 0.645568 7.4:+41244692 None:intergenic
GCTGTTTATAGAGGGCACAA+TGG 0.646019 7.4:-41246110 MS.gene055251:intron
AGCGGCAACGCATCCCTCAG+AGG 0.650317 7.4:+41244454 None:intergenic
TGTATTTGGAGTCACCTCTG+AGG 0.658303 7.4:-41244468 MS.gene055251:CDS
GCACGAGGAACTTCAACATG+AGG 0.659171 7.4:+41247962 None:intergenic
GACCTGATAGAATTTCACCA+TGG 0.666067 7.4:-41245226 MS.gene055251:CDS
GGCTGAACAAGAAACAGATG+AGG 0.666478 7.4:-41247152 MS.gene055251:CDS
AGTTGCAACAGCATGAGACG+CGG 0.666713 7.4:+41245989 None:intergenic
TTCAAAGGAGACACAACAGT+AGG 0.668217 7.4:-41244905 MS.gene055251:intron
AAGAACTCACTCCTTCAGCA+AGG 0.678844 7.4:-41246940 MS.gene055251:CDS
GTAGGAGCAGAAGCCAGAAG+GGG 0.683231 7.4:+41245194 None:intergenic
GCAGCAGCAATGGTTTATCG+AGG 0.685062 7.4:-41244760 MS.gene055251:CDS
TTATCGAGGAATCTGACTGG+CGG 0.694738 7.4:-41244746 MS.gene055251:CDS
AAAACTCTTTGTCCAGCACG+AGG 0.695811 7.4:+41247947 None:intergenic
TCTGATACAAGTACTCATGG+TGG 0.729409 7.4:-41246906 MS.gene055251:CDS
GTTGTGAGCAAGTGTCGACG+TGG 0.742837 7.4:+41246312 None:intergenic
TGTCAAGGAGAACAAAACGG+AGG 0.766105 7.4:-41244573 MS.gene055251:CDS
TTGATCATAACCATCCAACG+CGG 0.801658 7.4:+41244074 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTAATCTTTTAATTTT+GGG - chr7.4:41244149-41244168 MS.gene055251:intron 10.0%
!!! TTGTTTTAATCTTTTAATTT+TGG - chr7.4:41244148-41244167 MS.gene055251:intron 10.0%
!! AAACATTCTTAAAAGAAAAT+TGG + chr7.4:41244846-41244865 None:intergenic 15.0%
!! GAAAAAAAAGAATAATTCTT+TGG - chr7.4:41244076-41244095 MS.gene055251:CDS 15.0%
!! TATAACAAAGGATAAAATAA+AGG - chr7.4:41246045-41246064 MS.gene055251:CDS 15.0%
!! TTAATCAATTTGTATAACAA+AGG - chr7.4:41246033-41246052 MS.gene055251:CDS 15.0%
!!! ATTATTAACTTGTATTACAT+CGG + chr7.4:41246788-41246807 None:intergenic 15.0%
!!! ATTGGTATTATTATTTTGTA+GGG - chr7.4:41247894-41247913 MS.gene055251:intron 15.0%
!!! CTTGATTTTATTTTTTGTTT+TGG - chr7.4:41243845-41243864 MS.gene055251:intron 15.0%
!!! GTTTTAATCTTTTAATTTTG+GGG - chr7.4:41244150-41244169 MS.gene055251:intron 15.0%
!!! TTTATTTTTTGTTTTGGTTA+AGG - chr7.4:41243851-41243870 MS.gene055251:intron 15.0%
!! AAAAATTGTGAATCAAAAAG+TGG + chr7.4:41244556-41244575 None:intergenic 20.0%
!! AAATAAGTTTGATATCTCAA+AGG - chr7.4:41247227-41247246 MS.gene055251:intron 20.0%
!! AAATCACCCTTAAAAATAAA+AGG + chr7.4:41244050-41244069 None:intergenic 20.0%
!! AATCACCCTTAAAAATAAAA+GGG + chr7.4:41244049-41244068 None:intergenic 20.0%
!! CAAACTACAGAAATAAAATT+TGG + chr7.4:41245917-41245936 None:intergenic 20.0%
!! CTTACTTGATTATATGAATT+GGG - chr7.4:41244413-41244432 MS.gene055251:CDS 20.0%
!! GAAAATTATGCTTAGAATTT+GGG - chr7.4:41244340-41244359 MS.gene055251:CDS 20.0%
!! TAGTATTCAAATTAATAGTG+AGG + chr7.4:41247869-41247888 None:intergenic 20.0%
!! TATAAGTGTGAATAAGTATA+TGG - chr7.4:41245806-41245825 MS.gene055251:CDS 20.0%
!! TCTTACTTGATTATATGAAT+TGG - chr7.4:41244412-41244431 MS.gene055251:CDS 20.0%
!! TCTTCGAATATATAATGAAA+AGG + chr7.4:41245948-41245967 None:intergenic 20.0%
!! TGAAAATTATGCTTAGAATT+TGG - chr7.4:41244339-41244358 MS.gene055251:CDS 20.0%
!! TTACTTGATTATATGAATTG+GGG - chr7.4:41244414-41244433 MS.gene055251:CDS 20.0%
!!! AGGGCATTTTTTTTTTTTTT+TGG - chr7.4:41245759-41245778 MS.gene055251:CDS 20.0%
!!! AGGTTGTTTTTATTACAATA+TGG - chr7.4:41244226-41244245 MS.gene055251:intron 20.0%
!!! CATTGGTATTATTATTTTGT+AGG - chr7.4:41247893-41247912 MS.gene055251:intron 20.0%
!!! CTTTTCCCTTTTATTTTTAA+GGG - chr7.4:41244041-41244060 MS.gene055251:CDS 20.0%
!!! GGTTGTTTTTATTACAATAT+GGG - chr7.4:41244227-41244246 MS.gene055251:intron 20.0%
!!! GTTGTTTTTATTACAATATG+GGG - chr7.4:41244228-41244247 MS.gene055251:intron 20.0%
!!! TCTTTTCCCTTTTATTTTTA+AGG - chr7.4:41244040-41244059 MS.gene055251:CDS 20.0%
!!! TGATTCACAATTTTTTTTCT+TGG - chr7.4:41244561-41244580 MS.gene055251:CDS 20.0%
!!! TGGTAATAACATAATCTTTT+TGG - chr7.4:41244793-41244812 MS.gene055251:CDS 20.0%
!!! TGGTTTTTGTATAAATTCAA+AGG - chr7.4:41244096-41244115 MS.gene055251:CDS 20.0%
!!! TTGAATTTTGACATGTTTAT+AGG - chr7.4:41244459-41244478 MS.gene055251:CDS 20.0%
!!! TTGAGATATCAAACTTATTT+TGG + chr7.4:41247227-41247246 None:intergenic 20.0%
!!! TTTGAAATGAAAACGATTAT+AGG + chr7.4:41246553-41246572 None:intergenic 20.0%
!!! TTTTTTTTTTTGGTTTGCTT+AGG - chr7.4:41245769-41245788 MS.gene055251:CDS 20.0%
! AATTTGAATACTATGTGCAT+TGG - chr7.4:41247876-41247895 MS.gene055251:intron 25.0%
! ATAACCCTAATTCTAATACA+TGG - chr7.4:41246170-41246189 MS.gene055251:intron 25.0%
! ATCAACCAAAAATTTAGTGT+TGG - chr7.4:41245834-41245853 MS.gene055251:CDS 25.0%
! ATGAACCATGTATTAGAATT+AGG + chr7.4:41246178-41246197 None:intergenic 25.0%
! ATGTTATGTCTGAAAACATA+AGG - chr7.4:41246806-41246825 MS.gene055251:intron 25.0%
! ATGTTTACTAAAACTATGTC+TGG - chr7.4:41244860-41244879 MS.gene055251:CDS 25.0%
! CAAATTGGAGAAAAGAATTA+AGG + chr7.4:41244591-41244610 None:intergenic 25.0%
! CATTAGAAATCCAAACAAAT+TGG + chr7.4:41244606-41244625 None:intergenic 25.0%
! CCATACATTGTTTATTTACA+TGG - chr7.4:41247344-41247363 MS.gene055251:intron 25.0%
! CCATGTAAATAAACAATGTA+TGG + chr7.4:41247347-41247366 None:intergenic 25.0%
! GAAAGGAAAATCTTAGAATT+TGG + chr7.4:41245288-41245307 None:intergenic 25.0%
! GGAGAAAATTACCAAAAATT+GGG + chr7.4:41244183-41244202 None:intergenic 25.0%
! TATTCACACTTATAATGAAC+TGG + chr7.4:41245800-41245819 None:intergenic 25.0%
! TGAACCATGTATTAGAATTA+GGG + chr7.4:41246177-41246196 None:intergenic 25.0%
! TGATCAACTTATTGATGAAT+TGG - chr7.4:41247574-41247593 MS.gene055251:intron 25.0%
! TTATATATTCGAAGACTGTT+TGG - chr7.4:41245953-41245972 MS.gene055251:intron 25.0%
! TTGTTTCGAATTTCAAATGA+TGG - chr7.4:41246308-41246327 MS.gene055251:CDS 25.0%
!! AACTAGTAAAAGTTTTACCT+GGG + chr7.4:41245696-41245715 None:intergenic 25.0%
!! AATCTCTTGAGTCTTTTTAA+TGG + chr7.4:41245085-41245104 None:intergenic 25.0%
!! ATTTGAAATTCGAAACAAAG+TGG + chr7.4:41246306-41246325 None:intergenic 25.0%
!! CAATTTGTTTGGATTTCTAA+TGG - chr7.4:41244604-41244623 MS.gene055251:CDS 25.0%
!! CCAACTATACTAAGATTTTT+CGG + chr7.4:41247390-41247409 None:intergenic 25.0%
!! CTTACTTTATATGTTTGTTG+TGG - chr7.4:41243891-41243910 MS.gene055251:intron 25.0%
!! CTTTTGATGTCAATTTTTGT+TGG + chr7.4:41245146-41245165 None:intergenic 25.0%
!! GACTACAAAGTGTAAAATTT+TGG + chr7.4:41246617-41246636 None:intergenic 25.0%
!! TAAGATTTTCCTTTCTATTC+AGG - chr7.4:41245293-41245312 MS.gene055251:intron 25.0%
!! TTTCTTTTTGTCTTACTCTT+TGG - chr7.4:41244256-41244275 MS.gene055251:intron 25.0%
!! TTTTCTTAGTTTCCTTCATA+TGG - chr7.4:41245427-41245446 MS.gene055251:CDS 25.0%
!!! AGTATAGTTGGTAATATGTT+AGG - chr7.4:41247399-41247418 MS.gene055251:intron 25.0%
!!! ATTCTTTTCTCCAATTTGTT+TGG - chr7.4:41244593-41244612 MS.gene055251:CDS 25.0%
ACAATTTCCCATTTATTCCT+AGG + chr7.4:41247632-41247651 None:intergenic 30.0%
ACTTATTTGAGCTTATCTAC+TGG + chr7.4:41246140-41246159 None:intergenic 30.0%
AGAACCCAGATGAAATTTAA+CGG + chr7.4:41244205-41244224 None:intergenic 30.0%
AGGATCTTCACAATTATGAA+TGG - chr7.4:41244934-41244953 MS.gene055251:intron 30.0%
ATATTCTCATCAGGTTCAAT+GGG - chr7.4:41246362-41246381 MS.gene055251:intron 30.0%
ATGAACTCTATGAACAGTTA+TGG - chr7.4:41243632-41243651 MS.gene055251:CDS 30.0%
ATGAGAATATATGAGAAGAG+TGG + chr7.4:41246352-41246371 None:intergenic 30.0%
CAATCCACTATTTAACTCTA+TGG - chr7.4:41247451-41247470 MS.gene055251:intron 30.0%
CACTTTAAGCATATATTTCG+AGG - chr7.4:41244957-41244976 MS.gene055251:intron 30.0%
CATGTTCAAGAGAAAACATT+AGG + chr7.4:41245205-41245224 None:intergenic 30.0%
CCGAAAAATCTTAGTATAGT+TGG - chr7.4:41247387-41247406 MS.gene055251:intron 30.0%
CGATCAAACTCTAAATTATC+AGG + chr7.4:41244300-41244319 None:intergenic 30.0%
GATTATGTTATTACCAGTGA+TGG + chr7.4:41244789-41244808 None:intergenic 30.0%
GGGAGAAAATTACCAAAAAT+TGG + chr7.4:41244184-41244203 None:intergenic 30.0%
TACATCCTTACATTAGATTC+TGG + chr7.4:41244529-41244548 None:intergenic 30.0%
TAGTGATGAGATAGGTAATT+TGG + chr7.4:41247989-41248008 None:intergenic 30.0%
TATATTCTCATCAGGTTCAA+TGG - chr7.4:41246361-41246380 MS.gene055251:intron 30.0%
TCGAGTACTCTTAATTACTT+CGG - chr7.4:41244386-41244405 MS.gene055251:CDS 30.0%
TCTGAAAACATAAGGAATGA+CGG - chr7.4:41246814-41246833 MS.gene055251:intron 30.0%
TCTTCTCATATATTCTCATC+AGG - chr7.4:41246353-41246372 MS.gene055251:intron 30.0%
TGTGTTTCATTTGGAGATAT+CGG + chr7.4:41247282-41247301 None:intergenic 30.0%
TGTTGTCAATGTTCATTTAC+TGG - chr7.4:41243994-41244013 MS.gene055251:CDS 30.0%
TTACACAAAATTAACCCACT+TGG - chr7.4:41247715-41247734 MS.gene055251:CDS 30.0%
TTGATTATATGAATTGGGGT+GGG - chr7.4:41244418-41244437 MS.gene055251:CDS 30.0%
TTTGTGTAAAGAGATACTCA+CGG + chr7.4:41247704-41247723 None:intergenic 30.0%
! AAATACATTTGCTGCATACT+CGG + chr7.4:41247151-41247170 None:intergenic 30.0%
! ACTTCAAAAAGATTAGTTGC+TGG - chr7.4:41245362-41245381 MS.gene055251:intron 30.0%
! AGAGTTTTCTATTTTCCTCA+AGG - chr7.4:41243700-41243719 MS.gene055251:CDS 30.0%
! CAACTAGTAAAAGTTTTACC+TGG + chr7.4:41245697-41245716 None:intergenic 30.0%
! TATTTCTGTAGTTTGCAACA+TGG - chr7.4:41245922-41245941 MS.gene055251:intron 30.0%
! TCATGCCAACACTAAATTTT+TGG + chr7.4:41245842-41245861 None:intergenic 30.0%
! TGTTCTTTTTGTTGAGTCTT+AGG - chr7.4:41243775-41243794 MS.gene055251:intron 30.0%
!! AAAAATTTAGTGTTGGCATG+AGG - chr7.4:41245841-41245860 MS.gene055251:CDS 30.0%
!! ACTATGTCTGGATTTTGTTT+AGG - chr7.4:41244872-41244891 MS.gene055251:CDS 30.0%
!! AGATTTTCTGGCACAATAAT+TGG - chr7.4:41246199-41246218 MS.gene055251:intron 30.0%
!! AGGTTTAAGATGAGTTTTGA+TGG - chr7.4:41245861-41245880 MS.gene055251:intron 30.0%
!! ATTAGATAAGTCGGTTTTGT+AGG - chr7.4:41245245-41245264 MS.gene055251:CDS 30.0%
!! GGTTTAAGATGAGTTTTGAT+GGG - chr7.4:41245862-41245881 MS.gene055251:intron 30.0%
!! GTTAGAAGTATCAACAAATC+AGG - chr7.4:41243919-41243938 MS.gene055251:intron 30.0%
!! GTTTAAGATGAGTTTTGATG+GGG - chr7.4:41245863-41245882 MS.gene055251:intron 30.0%
!! GTTTTCATTTCGCTTTTCAA+AGG - chr7.4:41246712-41246731 MS.gene055251:CDS 30.0%
!! TTAGATAAGTCGGTTTTGTA+GGG - chr7.4:41245246-41245265 MS.gene055251:CDS 30.0%
!!! TCTGAGTGAGTTTTTGAAAT+AGG + chr7.4:41247003-41247022 None:intergenic 30.0%
AAACATTAGGTCACTAGTAG+TGG + chr7.4:41245192-41245211 None:intergenic 35.0%
AACTCTGATACAAGTACTCA+TGG - chr7.4:41244723-41244742 MS.gene055251:CDS 35.0%
AAGAGGATATTTCTTCACAC+TGG - chr7.4:41246224-41246243 MS.gene055251:intron 35.0%
AATAGAGCCTTAACTAAAGC+AGG + chr7.4:41246582-41246601 None:intergenic 35.0%
ACAAAACCCAGATGAACATT+TGG + chr7.4:41244123-41244142 None:intergenic 35.0%
ACCTGATAGAATTTCACCAT+GGG - chr7.4:41246407-41246426 MS.gene055251:intron 35.0%
ACTAAGTCTAACCCTACTAA+GGG + chr7.4:41246662-41246681 None:intergenic 35.0%
ACTCTACTTACTGGGAAAAT+GGG - chr7.4:41246752-41246771 MS.gene055251:intron 35.0%
AGATCCATCCTAGGAATAAA+TGG - chr7.4:41247621-41247640 MS.gene055251:intron 35.0%
ATGTGTTGTGTTATGATGCT+TGG - chr7.4:41243808-41243827 MS.gene055251:intron 35.0%
CAAAACCCAGATGAACATTT+GGG + chr7.4:41244122-41244141 None:intergenic 35.0%
CAAAATTAACCCACTTGGAT+TGG - chr7.4:41247720-41247739 MS.gene055251:intron 35.0%
CAAATCAGGAACTAAATCAG+AGG - chr7.4:41243933-41243952 MS.gene055251:intron 35.0%
CAATGATCATTTGACTGATC+AGG - chr7.4:41247035-41247054 MS.gene055251:intron 35.0%
CACAATGAACAATTCAGAGT+AGG + chr7.4:41247477-41247496 None:intergenic 35.0%
CATCATCAATCATTGAACTC+AGG + chr7.4:41245057-41245076 None:intergenic 35.0%
CTACAAGCTATAGATTGTTC+GGG - chr7.4:41247085-41247104 MS.gene055251:intron 35.0%
CTCCTGCTGCAAAATATAAA+AGG - chr7.4:41246472-41246491 MS.gene055251:intron 35.0%
CTGCAAAATATAAAAGGCCT+AGG - chr7.4:41246478-41246497 MS.gene055251:intron 35.0%
CTTGATTATATGAATTGGGG+TGG - chr7.4:41244417-41244436 MS.gene055251:CDS 35.0%
GAACCCAGATGAAATTTAAC+GGG + chr7.4:41244204-41244223 None:intergenic 35.0%
GAGTATGCAGCAAATGTATT+TGG - chr7.4:41247150-41247169 MS.gene055251:CDS 35.0%
GATCCATCCTAGGAATAAAT+GGG - chr7.4:41247622-41247641 MS.gene055251:intron 35.0%
GCTACAAGCTATAGATTGTT+CGG - chr7.4:41247084-41247103 MS.gene055251:intron 35.0%
GGGAAAAGAACAAAGAATGA+AGG + chr7.4:41244029-41244048 None:intergenic 35.0%
GTTTCTTCTAGTGATGAGAT+AGG + chr7.4:41247997-41248016 None:intergenic 35.0%
TAAATTTCATCTGGGTTCTG+AGG - chr7.4:41244206-41244225 MS.gene055251:intron 35.0%
TAACTATAGATCGTCTTTCG+TGG - chr7.4:41245723-41245742 MS.gene055251:intron 35.0%
TAGGCCATAGAGTTAAATAG+TGG + chr7.4:41247458-41247477 None:intergenic 35.0%
TCAGATTTCTCAAGTATACG+TGG - chr7.4:41245030-41245049 MS.gene055251:intron 35.0%
TCGTGGATAAATCTTGACAA+GGG - chr7.4:41245740-41245759 MS.gene055251:intron 35.0%
TCTCAAAGGCTTCAAAAGAA+AGG - chr7.4:41247241-41247260 MS.gene055251:intron 35.0%
TCTCCCGTTAAATTTCATCT+GGG - chr7.4:41244198-41244217 MS.gene055251:intron 35.0%
TGATTATATGAATTGGGGTG+GGG - chr7.4:41244419-41244438 MS.gene055251:CDS 35.0%
TGCTTGCTTTGTGTTTCATT+TGG + chr7.4:41247291-41247310 None:intergenic 35.0%
TGGATTGATAAAGAGAACGA+TGG + chr7.4:41247438-41247457 None:intergenic 35.0%
TGGTACCAGAATCTAATGTA+AGG - chr7.4:41244521-41244540 MS.gene055251:CDS 35.0%
TGTCAAAAGGTTCAAATGCA+GGG - chr7.4:41247506-41247525 MS.gene055251:intron 35.0%
TGTGTTCAAAACCTGTCAAA+AGG - chr7.4:41247493-41247512 MS.gene055251:intron 35.0%
TTCAAAATGGAGATCACTCA+AGG - chr7.4:41246252-41246271 MS.gene055251:CDS 35.0%
TTCGTGGATAAATCTTGACA+AGG - chr7.4:41245739-41245758 MS.gene055251:intron 35.0%
TTCTCCCGTTAAATTTCATC+TGG - chr7.4:41244197-41244216 MS.gene055251:intron 35.0%
TTGTAGGGAATTCTGCAATA+TGG - chr7.4:41247909-41247928 MS.gene055251:intron 35.0%
TTGTTGGGAAGTTTGAACAA+TGG + chr7.4:41243962-41243981 None:intergenic 35.0%
TTTCCCATTTATTCCTAGGA+TGG + chr7.4:41247628-41247647 None:intergenic 35.0%
! AAAACCGACTTATCTAATGC+GGG + chr7.4:41245243-41245262 None:intergenic 35.0%
! AAGCAAGATGCTGTTTATAG+AGG - chr7.4:41245513-41245532 MS.gene055251:intron 35.0%
! ACATGGTTCATCAGATTTTC+TGG - chr7.4:41246187-41246206 MS.gene055251:intron 35.0%
! AGCAAGATGCTGTTTATAGA+GGG - chr7.4:41245514-41245533 MS.gene055251:intron 35.0%
! ATCGATTCCTGCTTTAGTTA+AGG - chr7.4:41246572-41246591 MS.gene055251:intron 35.0%
! ATGTTATTACCAGTGATGGA+AGG + chr7.4:41244785-41244804 None:intergenic 35.0%
! ATTGTCTTCACTGATGATGA+AGG - chr7.4:41247647-41247666 MS.gene055251:CDS 35.0%
! CAAAACCGACTTATCTAATG+CGG + chr7.4:41245244-41245263 None:intergenic 35.0%
! CACACTGGTTGAATTCAAAA+TGG - chr7.4:41246239-41246258 MS.gene055251:intron 35.0%
! CTTTTATATTTTGCAGCAGG+AGG + chr7.4:41246474-41246493 None:intergenic 35.0%
! TGATTTTCTGAGCCATATGA+AGG + chr7.4:41245442-41245461 None:intergenic 35.0%
! TTGTCTTCACTGATGATGAA+GGG - chr7.4:41247648-41247667 MS.gene055251:CDS 35.0%
! TTTGTCTTTTGCTTCCTTGA+TGG - chr7.4:41245103-41245122 MS.gene055251:intron 35.0%
!! CTCAGTTTGCTAAGCAAATT+CGG + chr7.4:41244631-41244650 None:intergenic 35.0%
AAAGGCCCAAATGTTCATCT+GGG - chr7.4:41244114-41244133 MS.gene055251:CDS 40.0%
AACACGACAAAGGATCTTGT+TGG + chr7.4:41243978-41243997 None:intergenic 40.0%
AACTCAGGAATTGGTTGCTA+AGG - chr7.4:41244914-41244933 MS.gene055251:intron 40.0%
AAGTCCCGCATTAGATAAGT+CGG - chr7.4:41245236-41245255 MS.gene055251:CDS 40.0%
ACACGACAAAGGATCTTGTT+GGG + chr7.4:41243977-41243996 None:intergenic 40.0%
ACTGATAATAGCAGCAGCAA+TGG - chr7.4:41246862-41246881 MS.gene055251:CDS 40.0%
AGACTTAGTGGCGTTATACT+TGG - chr7.4:41246673-41246692 MS.gene055251:intron 40.0%
AGTAGGTGACTCTACTTACT+GGG - chr7.4:41246744-41246763 MS.gene055251:intron 40.0%
ATCTACTCCAACTCAGGAAT+TGG - chr7.4:41244905-41244924 MS.gene055251:intron 40.0%
ATGCCTTCATCTGTGATTTC+TGG - chr7.4:41245591-41245610 MS.gene055251:intron 40.0%
ATGTGCACAAAATGAGCTCA+GGG - chr7.4:41247962-41247981 MS.gene055251:CDS 40.0%
ATTCTCCTGAGACTGACAAA+AGG - chr7.4:41245889-41245908 MS.gene055251:intron 40.0%
CAATAGCAGAAGTTGCACTA+AGG - chr7.4:41247314-41247333 MS.gene055251:intron 40.0%
CACTAAGTCTAACCCTACTA+AGG + chr7.4:41246663-41246682 None:intergenic 40.0%
CCTTGATGGAAGAATACTCT+TGG - chr7.4:41245117-41245136 MS.gene055251:intron 40.0%
CTATCTTCTCCTCATTCAAG+TGG - chr7.4:41246916-41246935 MS.gene055251:CDS 40.0%
CTGTCAAAAGGTTCAAATGC+AGG - chr7.4:41247505-41247524 MS.gene055251:intron 40.0%
CTTAGTAGGGTTAGACTTAG+TGG - chr7.4:41246661-41246680 MS.gene055251:intron 40.0%
CTTAGTGCAACTTCTGCTAT+TGG + chr7.4:41247316-41247335 None:intergenic 40.0%
GAACATTGACAACACGACAA+AGG + chr7.4:41243988-41244007 None:intergenic 40.0%
GACCTGATAGAATTTCACCA+TGG - chr7.4:41246406-41246425 MS.gene055251:intron 40.0%
GACTCTACTTACTGGGAAAA+TGG - chr7.4:41246751-41246770 MS.gene055251:intron 40.0%
GGTGAAATTCTATCAGGTCT+TGG + chr7.4:41246405-41246424 None:intergenic 40.0%
GGTTGTCAAGGAGAACAAAA+CGG - chr7.4:41247056-41247075 MS.gene055251:intron 40.0%
GGTTTATGCACAGATAACTC+TGG - chr7.4:41244501-41244520 MS.gene055251:CDS 40.0%
GTTAGTTAAGACCTTGCTGA+AGG + chr7.4:41244706-41244725 None:intergenic 40.0%
TCCCATGGTGAAATTCTATC+AGG + chr7.4:41246411-41246430 None:intergenic 40.0%
TCTGATACAAGTACTCATGG+TGG - chr7.4:41244726-41244745 MS.gene055251:CDS 40.0%
TCTGCATCAGTTCTTGACAT+GGG + chr7.4:41247204-41247223 None:intergenic 40.0%
TGACCAGAAATCACAGATGA+AGG + chr7.4:41245597-41245616 None:intergenic 40.0%
TGGCACAATAATTGGACAAG+AGG - chr7.4:41246207-41246226 MS.gene055251:intron 40.0%
TGGTAAGGAAGCGGAATATT+TGG - chr7.4:41246524-41246543 MS.gene055251:intron 40.0%
TTAGCAACCAATTCCTGAGT+TGG + chr7.4:41244915-41244934 None:intergenic 40.0%
TTATCTACTGGCATAAGCAC+TGG + chr7.4:41246128-41246147 None:intergenic 40.0%
TTCAAAGGAGACACAACAGT+AGG - chr7.4:41246727-41246746 MS.gene055251:CDS 40.0%
TTGATCATAACCATCCAACG+CGG + chr7.4:41247561-41247580 None:intergenic 40.0%
TTGTAGTATACTACAAGCCC+AGG - chr7.4:41245676-41245695 MS.gene055251:intron 40.0%
! AGCTCATTTTGTGCACATCT+TGG + chr7.4:41247960-41247979 None:intergenic 40.0%
! ATGGTGGCTTTTCTGTTCTT+CGG - chr7.4:41244742-41244761 MS.gene055251:CDS 40.0%
! ATTCCTGAGTTGGAGTAGAT+TGG + chr7.4:41244905-41244924 None:intergenic 40.0%
! CTATTTTCCTCAAGGACACA+TGG - chr7.4:41243708-41243727 MS.gene055251:CDS 40.0%
! CTGCATTTGAACCTTTTGAC+AGG + chr7.4:41247507-41247526 None:intergenic 40.0%
! GAGATACGTTTGTGTTTCTG+AGG - chr7.4:41245384-41245403 MS.gene055251:CDS 40.0%
! GGCCTTTTATATTTTGCAGC+AGG + chr7.4:41246477-41246496 None:intergenic 40.0%
! GGGGTTAAGTTCCCAATTTT+TGG - chr7.4:41244169-41244188 MS.gene055251:intron 40.0%
! TGTCTTCACTGATGATGAAG+GGG - chr7.4:41247649-41247668 MS.gene055251:CDS 40.0%
! TTCCTGAGTTGGAGTAGATT+GGG + chr7.4:41244904-41244923 None:intergenic 40.0%
! TTTGACTGATCAGGTTGTCA+AGG - chr7.4:41247044-41247063 MS.gene055251:intron 40.0%
!! CATCTGTCGATTCAAGTAGA+AGG - chr7.4:41245004-41245023 MS.gene055251:intron 40.0%
!! CCAAGAGTATTCTTCCATCA+AGG + chr7.4:41245120-41245139 None:intergenic 40.0%
!! TCCAGATTTTGGTAAGGAAG+CGG - chr7.4:41246515-41246534 MS.gene055251:intron 40.0%
!! TGACGTTCCAGATTTTGGTA+AGG - chr7.4:41246509-41246528 MS.gene055251:intron 40.0%
AAAACTCTTTGTCCAGCACG+AGG + chr7.4:41243688-41243707 None:intergenic 45.0%
AAGAACTCACTCCTTCAGCA+AGG - chr7.4:41244692-41244711 MS.gene055251:CDS 45.0%
AAGGAGTGAGTTCTTGGTCT+TGG + chr7.4:41244687-41244706 None:intergenic 45.0%
AAGTCTAACCCTACTAAGGG+AGG + chr7.4:41246659-41246678 None:intergenic 45.0%
ACTTGTTCCATGTGTCCTTG+AGG + chr7.4:41243718-41243737 None:intergenic 45.0%
ATCAGTTCTTGACATGGGAG+CGG + chr7.4:41247199-41247218 None:intergenic 45.0%
CAAAGGCCCAAATGTTCATC+TGG - chr7.4:41244113-41244132 MS.gene055251:CDS 45.0%
CACAATGGAGAATTACGCGT+TGG - chr7.4:41245537-41245556 MS.gene055251:intron 45.0%
CAGTAGGTGACTCTACTTAC+TGG - chr7.4:41246743-41246762 MS.gene055251:intron 45.0%
CAGTTATGGAAAGCTTGTGC+TGG - chr7.4:41243646-41243665 MS.gene055251:CDS 45.0%
CGTGGTTGACCTGAATAGAA+AGG + chr7.4:41245305-41245324 None:intergenic 45.0%
GAAGGGGATATGATGCTTGT+TGG - chr7.4:41247665-41247684 MS.gene055251:CDS 45.0%
GATGTGCACAAAATGAGCTC+AGG - chr7.4:41247961-41247980 MS.gene055251:CDS 45.0%
GGAATGACGGTATGCATTTG+TGG - chr7.4:41246827-41246846 MS.gene055251:intron 45.0%
GGCTGAACAAGAAACAGATG+AGG - chr7.4:41244480-41244499 MS.gene055251:CDS 45.0%
GGTTTATCGAGGAATCTGAC+TGG - chr7.4:41246883-41246902 MS.gene055251:CDS 45.0%
GTCTGCATCAGTTCTTGACA+TGG + chr7.4:41247205-41247224 None:intergenic 45.0%
GTGTCCTGACACAAATGAGA+AGG + chr7.4:41246943-41246962 None:intergenic 45.0%
TAAAGAGATACTCACGGCCA+TGG + chr7.4:41247698-41247717 None:intergenic 45.0%
TCCGCTTCCTTACCAAAATC+TGG + chr7.4:41246519-41246538 None:intergenic 45.0%
TGAGAAGGACCACTTGAATG+AGG + chr7.4:41246928-41246947 None:intergenic 45.0%
TGGTCCTTCTCATTTGTGTC+AGG - chr7.4:41246936-41246955 MS.gene055251:CDS 45.0%
TGTCAAGGAGAACAAAACGG+AGG - chr7.4:41247059-41247078 MS.gene055251:intron 45.0%
TTATCGAGGAATCTGACTGG+CGG - chr7.4:41246886-41246905 MS.gene055251:CDS 45.0%
TTGCTGAAGGAGTGAGTTCT+TGG + chr7.4:41244693-41244712 None:intergenic 45.0%
TTGTCTTACTCTTTGGTCCC+CGG - chr7.4:41244263-41244282 MS.gene055251:intron 45.0%
! CATTTTGTGCACATCTTGGC+TGG + chr7.4:41247956-41247975 None:intergenic 45.0%
! CCAAAATCTGGAACGTCACT+AGG + chr7.4:41246507-41246526 None:intergenic 45.0%
! CCTAGTGACGTTCCAGATTT+TGG - chr7.4:41246504-41246523 MS.gene055251:intron 45.0%
! GCTGTTTATAGAGGGCACAA+TGG - chr7.4:41245522-41245541 MS.gene055251:intron 45.0%
! GTATTTGGAGTCACCTCTGA+GGG - chr7.4:41247165-41247184 MS.gene055251:intron 45.0%
! TGCGATTAGTCCACTCAAAC+TGG + chr7.4:41247815-41247834 None:intergenic 45.0%
! TGGTACCTTTTGTCAGTCTC+AGG + chr7.4:41245897-41245916 None:intergenic 45.0%
! TGTATTTGGAGTCACCTCTG+AGG - chr7.4:41247164-41247183 MS.gene055251:intron 45.0%
!! AATTTGGGAGTGTTCGAGTC+AGG - chr7.4:41244355-41244374 MS.gene055251:CDS 45.0%
!! AGTTCTTGGTCTTGGAGGTT+CGG + chr7.4:41244679-41244698 None:intergenic 45.0%
!! GTGGTATTGACTTGAGACCT+GGG - chr7.4:41247747-41247766 MS.gene055251:intron 45.0%
!! TGCTTGTTGGTGATGATCCA+TGG - chr7.4:41247678-41247697 MS.gene055251:CDS 45.0%
ACTAAGGGAGGTCAGCTACA+TGG + chr7.4:41246647-41246666 None:intergenic 50.0%
AGAAGGGGTTCTATCTCCCA+TGG + chr7.4:41246426-41246445 None:intergenic 50.0%
AGTTGCAACAGCATGAGACG+CGG + chr7.4:41245646-41245665 None:intergenic 50.0%
ATGGGAGATAGAACCCCTTC+TGG - chr7.4:41246425-41246444 MS.gene055251:intron 50.0%
CACAGAATGCCTTCCATCAC+TGG - chr7.4:41244773-41244792 MS.gene055251:CDS 50.0%
CATGTTGAAGTTCCTCGTGC+TGG - chr7.4:41243673-41243692 MS.gene055251:CDS 50.0%
GAATCGAACCTGAGACCTTG+AGG + chr7.4:41247784-41247803 None:intergenic 50.0%
GACACTTGCTCACAACTGGA+TGG - chr7.4:41245327-41245346 MS.gene055251:intron 50.0%
GCACGAGGAACTTCAACATG+AGG + chr7.4:41243673-41243692 None:intergenic 50.0%
GCAGCAGCAATGGTTTATCG+AGG - chr7.4:41246872-41246891 MS.gene055251:CDS 50.0%
GCAGGAGGTTGAATAGTCGT+AGG + chr7.4:41246459-41246478 None:intergenic 50.0%
GGACAAGGATCAAGGCTTGT+AGG + chr7.4:41244654-41244673 None:intergenic 50.0%
GGTCTCAAGTCAATACCACC+AGG + chr7.4:41247746-41247765 None:intergenic 50.0%
GTAGCTGACCTCCCTTAGTA+GGG - chr7.4:41246648-41246667 MS.gene055251:intron 50.0%
GTCCCAATCTACTCCAACTC+AGG - chr7.4:41244899-41244918 MS.gene055251:CDS 50.0%
TAGTCCACTCAAACTGGCAC+CGG + chr7.4:41247809-41247828 None:intergenic 50.0%
TGAAGGGACAGATCCATCCT+AGG - chr7.4:41247612-41247631 MS.gene055251:intron 50.0%
TGTAGCTGACCTCCCTTAGT+AGG - chr7.4:41246647-41246666 MS.gene055251:intron 50.0%
TGTCTTACTCTTTGGTCCCC+GGG - chr7.4:41244264-41244283 MS.gene055251:intron 50.0%
TTATCAGGACCCCTTTACCC+CGG + chr7.4:41244285-41244304 None:intergenic 50.0%
! GATGAAGGCATGCAGCTTTG+TGG + chr7.4:41245582-41245601 None:intergenic 50.0%
! TGCGACACTCTTGCTATCGT+CGG + chr7.4:41246968-41246987 None:intergenic 50.0%
!! CAAATGCAGGGTGTTGCAGT+GGG - chr7.4:41247518-41247537 MS.gene055251:intron 50.0%
!! CAGTGATGGAAGGCATTCTG+TGG + chr7.4:41244775-41244794 None:intergenic 50.0%
!! GAGTGAGTTCTTGGTCTTGG+AGG + chr7.4:41244684-41244703 None:intergenic 50.0%
!! GGTGGTATTGACTTGAGACC+TGG - chr7.4:41247746-41247765 MS.gene055251:intron 50.0%
!! TAAGCACTGGCGAGACAGTT+CGG + chr7.4:41246115-41246134 None:intergenic 50.0%
!! TAGCAAGAGTGTCGCAGTCT+CGG - chr7.4:41246972-41246991 MS.gene055251:CDS 50.0%
!! TCAAATGCAGGGTGTTGCAG+TGG - chr7.4:41247517-41247536 MS.gene055251:intron 50.0%
!! TTAACCCACTTGGATTGGCC+TGG - chr7.4:41247725-41247744 MS.gene055251:intron 50.0%
ACCACCAGGCCAATCCAAGT+GGG + chr7.4:41247732-41247751 None:intergenic 55.0%
AGTCCACTCAAACTGGCACC+GGG + chr7.4:41247808-41247827 None:intergenic 55.0%
CGTAGGAGCAGAAGCCAGAA+GGG + chr7.4:41246442-41246461 None:intergenic 55.0%
CGTCGACACTTGCTCACAAC+TGG - chr7.4:41245323-41245342 MS.gene055251:intron 55.0%
GCTGCATACTCGGACACCTT+AGG + chr7.4:41247141-41247160 None:intergenic 55.0%
GGAACGTCACTAGGTAGCCT+AGG + chr7.4:41246498-41246517 None:intergenic 55.0%
GGAATCTGACTGGCGGAAGT+TGG - chr7.4:41246893-41246912 MS.gene055251:CDS 55.0%
GGTCTCAGGTTCGATTCTCC+CGG - chr7.4:41247787-41247806 MS.gene055251:intron 55.0%
GTAGGAGCAGAAGCCAGAAG+GGG + chr7.4:41246441-41246460 None:intergenic 55.0%
GTCTTACTCTTTGGTCCCCG+GGG - chr7.4:41244265-41244284 MS.gene055251:intron 55.0%
GTTCGGCAGGACAAGGATCA+AGG + chr7.4:41244662-41244681 None:intergenic 55.0%
TACCACCAGGCCAATCCAAG+TGG + chr7.4:41247733-41247752 None:intergenic 55.0%
TATCAGGACCCCTTTACCCC+GGG + chr7.4:41244284-41244303 None:intergenic 55.0%
TCCTCGCACGAACACTCCTA+AGG - chr7.4:41247122-41247141 MS.gene055251:CDS 55.0%
TCGAACCTGAGACCTTGAGG+AGG + chr7.4:41247781-41247800 None:intergenic 55.0%
TCGTAGGAGCAGAAGCCAGA+AGG + chr7.4:41246443-41246462 None:intergenic 55.0%
TCTGGTCAGAGCATGCACCT+TGG - chr7.4:41245609-41245628 MS.gene055251:intron 55.0%
TCTTTGGTCCCCGGGGTAAA+GGG - chr7.4:41244272-41244291 MS.gene055251:intron 55.0%
! GAGAATTACGCGTTGGCGTG+AGG - chr7.4:41245544-41245563 MS.gene055251:intron 55.0%
!! AAGCACTGGCGAGACAGTTC+GGG + chr7.4:41246114-41246133 None:intergenic 55.0%
!! ACCTTAGGAGTGTTCGTGCG+AGG + chr7.4:41247126-41247145 None:intergenic 55.0%
!! CGGTTTTGTAGGGTCGAGTC+AGG - chr7.4:41245256-41245275 MS.gene055251:CDS 55.0%
!! GTTGTGAGCAAGTGTCGACG+TGG + chr7.4:41245323-41245342 None:intergenic 55.0%
ACGCGGTTGCAAGGACTCCA+AGG + chr7.4:41245629-41245648 None:intergenic 60.0%
ATCAGGACCCCTTTACCCCG+GGG + chr7.4:41244283-41244302 None:intergenic 60.0%
CAGCATGAGACGCGGTTGCA+AGG + chr7.4:41245638-41245657 None:intergenic 60.0%
CTCTTTGGTCCCCGGGGTAA+AGG - chr7.4:41244271-41244290 MS.gene055251:intron 60.0%
CTTGGAGGTTCGGCAGGACA+AGG + chr7.4:41244669-41244688 None:intergenic 60.0%
CTTTGGTCCCCGGGGTAAAG+GGG - chr7.4:41244273-41244292 MS.gene055251:intron 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG - chr7.4:41247773-41247792 MS.gene055251:intron 60.0%
GTGGACTTGACCGCGTTGGA+TGG - chr7.4:41247548-41247567 MS.gene055251:intron 60.0%
! TCTCCCGGTGCCAGTTTGAG+TGG - chr7.4:41247802-41247821 MS.gene055251:intron 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG - chr7.4:41247766-41247785 MS.gene055251:intron 60.0%
! TTGAGGAGGAGCACACTCCC+AGG + chr7.4:41247767-41247786 None:intergenic 60.0%
!! ACCCACTTGGATTGGCCTGG+TGG - chr7.4:41247728-41247747 MS.gene055251:intron 60.0%
!! AGAGTGTCGCAGTCTCGGCT+TGG - chr7.4:41246977-41246996 MS.gene055251:CDS 60.0%
!! CTTGGTCTTGGAGGTTCGGC+AGG + chr7.4:41244675-41244694 None:intergenic 60.0%
AGCGGCAACGCATCCCTCAG+AGG + chr7.4:41247181-41247200 None:intergenic 65.0%
TGTTGCAGTGGGTCGTGCGG+TGG - chr7.4:41247529-41247548 MS.gene055251:intron 65.0%
! GGGTGTTGCAGTGGGTCGTG+CGG - chr7.4:41247526-41247545 MS.gene055251:intron 65.0%
! TGCGGTGGACTTGACCGCGT+TGG - chr7.4:41247544-41247563 MS.gene055251:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 41243607 41248047 41243607 ID=MS.gene055251
chr7.4 mRNA 41243607 41248047 41243607 ID=MS.gene055251.t1;Parent=MS.gene055251
chr7.4 exon 41247919 41248047 41247919 ID=MS.gene055251.t1.exon1;Parent=MS.gene055251.t1
chr7.4 CDS 41247919 41248047 41247919 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41247639 41247734 41247639 ID=MS.gene055251.t1.exon2;Parent=MS.gene055251.t1
chr7.4 CDS 41247639 41247734 41247639 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41247117 41247173 41247117 ID=MS.gene055251.t1.exon3;Parent=MS.gene055251.t1
chr7.4 CDS 41247117 41247173 41247117 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41246860 41247012 41246860 ID=MS.gene055251.t1.exon4;Parent=MS.gene055251.t1
chr7.4 CDS 41246860 41247012 41246860 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41246676 41246760 41246676 ID=MS.gene055251.t1.exon5;Parent=MS.gene055251.t1
chr7.4 CDS 41246676 41246760 41246676 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41246249 41246339 41246249 ID=MS.gene055251.t1.exon6;Parent=MS.gene055251.t1
chr7.4 CDS 41246249 41246339 41246249 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41245957 41246121 41245957 ID=MS.gene055251.t1.exon7;Parent=MS.gene055251.t1
chr7.4 CDS 41245957 41246121 41245957 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41245744 41245863 41245744 ID=MS.gene055251.t1.exon8;Parent=MS.gene055251.t1
chr7.4 CDS 41245744 41245863 41245744 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41245381 41245453 41245381 ID=MS.gene055251.t1.exon9;Parent=MS.gene055251.t1
chr7.4 CDS 41245381 41245453 41245381 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41245129 41245279 41245129 ID=MS.gene055251.t1.exon10;Parent=MS.gene055251.t1
chr7.4 CDS 41245129 41245279 41245129 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41244319 41244920 41244319 ID=MS.gene055251.t1.exon11;Parent=MS.gene055251.t1
chr7.4 CDS 41244319 41244920 41244319 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41243952 41244139 41243952 ID=MS.gene055251.t1.exon12;Parent=MS.gene055251.t1
chr7.4 CDS 41243952 41244139 41243952 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
chr7.4 exon 41243607 41243739 41243607 ID=MS.gene055251.t1.exon13;Parent=MS.gene055251.t1
chr7.4 CDS 41243607 41243739 41243607 ID=cds.MS.gene055251.t1;Parent=MS.gene055251.t1
Gene Sequence

>MS.gene055251

ATGATGATGAATAATGGTGAAGAAGATGAACTCTATGAACAGTTATGGAAAGCTTGTGCTGGTCCTCATGTTGAAGTTCCTCGTGCTGGACAAAGAGTTTTCTATTTTCCTCAAGGACACATGGAACAAGTTTGTTTTTTGTTTTCGTTCTTTTGCTATATTTGTTTTTGTTCTTTTTGTTGAGTCTTAGGTTGTTTGAAAATGTGTTGTGTTATGATGCTTGGAATTTGTATATATGCTTGATTTTATTTTTTGTTTTGGTTAAGGAATTTGTTTTTTTTGTTCTTACTTTATATGTTTGTTGTGGATGTAGTTAGAAGTATCAACAAATCAGGAACTAAATCAGAGGATTCCATTGTTCAAACTTCCCAACAAGATCCTTTGTCGTGTTGTCAATGTTCATTTACTGGTAATTTTCTCCTTCATTCTTTGTTCTTTTCCCTTTTATTTTTAAGGGTGATTTTGAGAAGAAAAAAAAGAATAATTCTTTGGTTTTTGTATAAATTCAAAGGCCCAAATGTTCATCTGGGTTTTGTAGTTATTGTTTTAATCTTTTAATTTTGGGGTTAAGTTCCCAATTTTTGGTAATTTTCTCCCGTTAAATTTCATCTGGGTTCTGAGGTTGTTTTTATTACAATATGGGGTTTAGTTTCTTTTTGTCTTACTCTTTGGTCCCCGGGGTAAAGGGGTCCTGATAATTTAGAGTTTGATCGAGAGATAAGTAAAGTCTAATGAAAATTATGCTTAGAATTTGGGAGTGTTCGAGTCAGGCTTTGAACTCGAGTACTCTTAATTACTTCGGCTTTCTTACTTGATTATATGAATTGGGGTGGGGAAAAACAAAAAATTGACTTGAATTTTGACATGTTTATAGGCTGAACAAGAAACAGATGAGGTTTATGCACAGATAACTCTGGTACCAGAATCTAATGTAAGGATGTAGCTACCACTTTTTGATTCACAATTTTTTTTCTTGGTCAACCTTAATTCTTTTCTCCAATTTGTTTGGATTTCTAATGGACCGAATTTGCTTAGCAAACTGAGCCTACAAGCCTTGATCCTTGTCCTGCCGAACCTCCAAGACCAAGAACTCACTCCTTCAGCAAGGTCTTAACTAACTCTGATACAAGTACTCATGGTGGCTTTTCTGTTCTTCGGAAACATGCCACAGAATGCCTTCCATCACTGGTAATAACATAATCTTTTTGGTTTTTAACTGAATTTGTGTCAACAAATCCAATTTTCTTTTAAGAATGTTTACTAAAACTATGTCTGGATTTTGTTTAGGATATGTCCCAATCTACTCCAACTCAGGAATTGGTTGCTAAGGATCTTCACAATTATGAATGGCACTTTAAGCATATATTTCGAGGTAAAAGAGTTTTGAAATTTACAAACATCTGTCGATTCAAGTAGAAGGAACTCAGATTTCTCAAGTATACGTGGTCCTGAGTTCAATGATTGATGATGCTTGACCATTAAAAAGACTCAAGAGATTTGTCTTTTGCTTCCTTGATGGAAGAATACTCTTGGAAACCAACAAAAATTGACATCAAAAGTTTTCACTTGACTTTTTGTTAAACCACTACTAGTGACCTAATGTTTTCTCTTGAACATGATTTTGTTGAGAAGTCCCGCATTAGATAAGTCGGTTTTGTAGGGTCGAGTCAGGCTCAGACCAAATTCTAAGATTTTCCTTTCTATTCAGGTCAACCACGTCGACACTTGCTCACAACTGGATGGAGTACTTTCGTGACTTCAAAAAGATTAGTTGCTGGAGATACGTTTGTGTTTCTGAGGTATACATTTGATGTTTCTCTTTTTCTTAGTTTCCTTCATATGGCTCAGAAAATCATATACTGTAAAATCATACAAGTTTTCTGTTCGACTATGAAAACATTAAACTAAGCAAGATGCTGTTTATAGAGGGCACAATGGAGAATTACGCGTTGGCGTGAGGCATCTTGCTTCTCCACAAAGCTGCATGCCTTCATCTGTGATTTCTGGTCAGAGCATGCACCTTGGAGTCCTTGCAACCGCGTCTCATGCTGTTGCAACTCAAACTCTTTTTGTAGTATACTACAAGCCCAGGTAAAACTTTTACTAGTTGTAAAAATAACTATAGATCGTCTTTCGTGGATAAATCTTGACAAGGGCATTTTTTTTTTTTTTTGGTTTGCTTAGGATGAGCCAGTTCATTATAAGTGTGAATAAGTATATGGAAGCTATCAACCAAAAATTTAGTGTTGGCATGAGGTTTAAGATGAGTTTTGATGGGGATGATTCTCCTGAGACTGACAAAAGGTACCAAATTTTATTTCTGTAGTTTGCAACATGGCCTTTTCATTATATATTCGAAGACTGTTTGGATAAACAACTTAATTAAACACTTATAGTATGAACATTTATCATATAAGCATTTATGTTTAATCAATTTGTATAACAAAGGATAAAATAAAGGCAAATTGTTTTCGTATAAGCTAAAAGCTGATTTCATAAGCTCTCCCGAACTGTCTCGCCAGTGCTTATGCCAGTAGATAAGCTCAAATAAGTCAATTAAAAAATAACCCTAATTCTAATACATGGTTCATCAGATTTTCTGGCACAATAATTGGACAAGAGGATATTTCTTCACACTGGTTGAATTCAAAATGGAGATCACTCAAGGTATTCTCACTTTTGATATCTTCAATAGTCCACTTTGTTTCGAATTTCAAATGATGGTTAGTATTCATTATTCATCCACTCTTCTCATATATTCTCATCAGGTTCAATGGGATGACGCTGCATCGATTCCAAGACCTGATAGAATTTCACCATGGGAGATAGAACCCCTTCTGGCTTCTGCTCCTACGACTATTCAACCTCCTGCTGCAAAATATAAAAGGCCTAGGCTACCTAGTGACGTTCCAGATTTTGGTAAGGAAGCGGAATATTTGGTATCCTATAATCGTTTTCATTTCAAATCGATTCCTGCTTTAGTTAAGGCTCTATTTTAAACGCTCTTCCAAAATTTTACACTTTGTAGTCGTCGAATCCATGTAGCTGACCTCCCTTAGTAGGGTTAGACTTAGTGGCGTTATACTTGGTGATTGTTTTGCTGACGTTTTCATTTCGCTTTTCAAAGGAGACACAACAGTAGGTGACTCTACTTACTGGGAAAATGGGCTGACACAATCCGATGTAATACAAGTTAATAATGTTATGTCTGAAAACATAAGGAATGACGGTATGCATTTGTGGCATCATAAGCAAACTGATAATAGCAGCAGCAATGGTTTATCGAGGAATCTGACTGGCGGAAGTTGGCTATCTTCTCCTCATTCAAGTGGTCCTTCTCATTTGTGTCAGGACACGACCGACGATAGCAAGAGTGTCGCAGTCTCGGCTTGGCCTATTTCAAAAACTCACTCAGAAATATTGAACAACAATGATCATTTGACTGATCAGGTTGTCAAGGAGAACAAAACGGAGGCTGCTACAAGCTATAGATTGTTCGGGATTGATCTTAATGATCCTCGCACGAACACTCCTAAGGTGTCCGAGTATGCAGCAAATGTATTTGGAGTCACCTCTGAGGGATGCGTTGCCGCTCCCATGTCAAGAACTGATGCAGACCAAAATAAGTTTGATATCTCAAAGGCTTCAAAAGAAAGGAAACAAGAACAGCTACCGATATCTCCAAATGAAACACAAAGCAAGCAAACCAATAGCAGAAGTTGCACTAAGGTACTTATCCATACATTGTTTATTTACATGGTAGCGTTAATATATGTTTAACCGAAAAATCTTAGTATAGTTGGTAATATGTTAGGTATAGAAATTGAACCATCGTTCTCTTTATCAATCCACTATTTAACTCTATGGCCTACTCTGAATTGTTCATTGTGTTCAAAACCTGTCAAAAGGTTCAAATGCAGGGTGTTGCAGTGGGTCGTGCGGTGGACTTGACCGCGTTGGATGGTTATGATCAACTTATTGATGAATTGGAGAAGCTGTTTGACATGAAGGGACAGATCCATCCTAGGAATAAATGGGAAATTGTCTTCACTGATGATGAAGGGGATATGATGCTTGTTGGTGATGATCCATGGCCGTGAGTATCTCTTTACACAAAATTAACCCACTTGGATTGGCCTGGTGGTATTGACTTGAGACCTGGGAGTGTGCTCCTCCTCAAGGTCTCAGGTTCGATTCTCCCGGTGCCAGTTTGAGTGGACTAATCGCAACTTAATTTCACAATTACTCACATAACAGCTCCTCACTATTAATTTGAATACTATGTGCATTGGTATTATTATTTTGTAGGGAATTCTGCAATATGGTGAGAAGAATCTTCATTTGTTCCAGCCAAGATGTGCACAAAATGAGCTCAGGGACCAAATTACCTATCTCATCACTAGAAGAAACTGTAATAAGCTCAGACACAGCTGAGATATGA

Protein sequence

>MS.gene055251.t1

MMMNNGEEDELYEQLWKACAGPHVEVPRAGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPNKILCRVVNVHLLAEQETDEVYAQITLVPESNQTEPTSLDPCPAEPPRPRTHSFSKVLTNSDTSTHGGFSVLRKHATECLPSLDMSQSTPTQELVAKDLHNYEWHFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGHNGELRVGVRHLASPQSCMPSSVISGQSMHLGVLATASHAVATQTLFVVYYKPRMSQFIISVNKYMEAINQKFSVGMRFKMSFDGDDSPETDKRFSGTIIGQEDISSHWLNSKWRSLKVQWDDAASIPRPDRISPWEIEPLLASAPTTIQPPAAKYKRPRLPSDVPDFGDTTVGDSTYWENGLTQSDVIQVNNVMSENIRNDGMHLWHHKQTDNSSSNGLSRNLTGGSWLSSPHSSGPSHLCQDTTDDSKSVAVSAWPISKTHSEILNNNDHLTDQVVKENKTEAATSYRLFGIDLNDPRTNTPKVSEYAANVFGVTSEGCVAAPMSRTDADQNKFDISKASKERKQEQLPISPNETQSKQTNSRSCTKVQMQGVAVGRAVDLTALDGYDQLIDELEKLFDMKGQIHPRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVHKMSSGTKLPISSLEETVISSDTAEI