AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08874

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08874.t1 MTR_4g059370 92.308 325 25 0 51 375 68 392 0.0 622
MS.gene08874.t1 MTR_1g090270 67.989 378 115 2 3 375 89 465 0.0 540
MS.gene08874.t1 MTR_1g090280 80.000 185 37 0 191 375 131 315 8.74e-107 316
MS.gene08874.t1 MTR_2g014900 42.400 375 203 7 5 374 89 455 1.92e-105 318
MS.gene08874.t1 MTR_4g079270 41.645 377 204 8 5 374 90 457 6.30e-99 301
MS.gene08874.t1 MTR_2g083380 43.501 377 199 8 5 375 107 475 2.25e-95 293
MS.gene08874.t1 MTR_4g079250 39.788 377 211 8 5 374 90 457 8.36e-95 291
MS.gene08874.t1 MTR_2g083490 42.480 379 200 8 5 375 90 458 1.27e-93 288
MS.gene08874.t1 MTR_2g083430 40.212 378 208 9 5 374 90 457 4.65e-86 268
MS.gene08874.t1 MTR_2g083480 39.628 376 213 8 5 374 90 457 7.55e-86 268
MS.gene08874.t1 MTR_2g083420 36.649 382 200 9 1 374 86 433 6.82e-84 262
MS.gene08874.t1 MTR_2g083390 36.579 380 203 8 1 374 86 433 8.34e-82 256
MS.gene08874.t1 MTR_8g068330 31.593 383 245 9 1 373 87 462 3.24e-57 193
MS.gene08874.t1 MTR_8g068360 32.546 381 237 11 5 374 95 466 3.18e-55 188
MS.gene08874.t1 MTR_4g123553 30.749 387 232 10 1 372 93 458 1.51e-53 184
MS.gene08874.t1 MTR_2g008226 31.593 383 232 10 8 373 99 468 1.92e-53 184
MS.gene08874.t1 MTR_2g008220 32.898 383 223 11 5 371 97 461 2.07e-52 181
MS.gene08874.t1 MTR_2g086283 37.410 278 116 5 101 375 114 336 3.25e-51 174
MS.gene08874.t1 MTR_2g008225 33.598 378 221 14 8 371 101 462 3.55e-51 177
MS.gene08874.t1 MTR_4g077960 32.051 390 223 13 1 372 70 435 7.66e-50 173
MS.gene08874.t1 MTR_2g046620 31.606 386 226 11 3 372 96 459 1.33e-49 173
MS.gene08874.t1 MTR_6g036650 32.152 395 222 13 1 372 97 468 1.52e-49 173
MS.gene08874.t1 MTR_8g068340 30.239 377 248 6 5 372 95 465 1.80e-49 173
MS.gene08874.t1 MTR_6g042310 29.948 384 239 7 1 372 96 461 5.69e-48 169
MS.gene08874.t1 MTR_7g067330 30.053 376 206 11 5 368 92 422 3.68e-47 166
MS.gene08874.t1 MTR_2g083360 28.610 374 160 8 1 374 107 373 1.81e-46 163
MS.gene08874.t1 MTR_8g007565 33.894 357 211 9 5 345 92 439 8.52e-45 160
MS.gene08874.t1 MTR_8g007650 33.894 357 211 9 5 345 92 439 1.57e-44 160
MS.gene08874.t1 MTR_5g066410 32.898 383 216 9 5 372 83 439 1.36e-43 157
MS.gene08874.t1 MTR_7g067120 28.800 375 212 12 5 368 92 422 1.21e-41 151
MS.gene08874.t1 MTR_8g006710 28.453 362 225 9 7 345 89 439 6.19e-35 134
MS.gene08874.t1 MTR_7g117170 28.165 387 247 11 4 371 97 471 3.37e-34 132
MS.gene08874.t1 MTR_8g006730 26.836 354 241 8 7 345 90 440 9.91e-34 130
MS.gene08874.t1 MTR_6g033725 34.310 239 134 7 130 351 205 437 6.81e-33 128
MS.gene08874.t1 MTR_8g009073 31.907 257 159 6 127 371 79 331 8.00e-33 125
MS.gene08874.t1 MTR_3g435310 28.954 373 209 12 3 372 98 417 9.60e-33 127
MS.gene08874.t1 MTR_0184s0040 36.598 194 112 3 167 353 269 458 1.05e-32 128
MS.gene08874.t1 MTR_0078s0190 36.598 194 112 3 167 353 269 458 1.05e-32 128
MS.gene08874.t1 MTR_4g485630 28.718 390 240 12 12 375 100 477 1.27e-32 127
MS.gene08874.t1 MTR_6g488280 38.462 169 97 1 171 332 256 424 1.36e-32 127
MS.gene08874.t1 MTR_0428s0010 38.462 169 97 1 171 332 256 424 1.36e-32 127
MS.gene08874.t1 MTR_2g098430 29.539 369 234 12 5 354 91 452 2.02e-32 127
MS.gene08874.t1 MTR_8g027885 34.375 256 152 6 127 371 218 468 2.34e-32 127
MS.gene08874.t1 MTR_0184s0030 37.113 194 110 4 171 356 259 448 3.29e-32 126
MS.gene08874.t1 MTR_8g027870 27.907 387 250 10 1 371 95 468 3.38e-32 126
MS.gene08874.t1 MTR_6g033625 31.387 274 162 8 111 369 194 456 3.70e-32 126
MS.gene08874.t1 MTR_8g009067 34.135 208 126 3 171 371 139 342 4.46e-32 124
MS.gene08874.t1 MTR_8g009073 33.193 238 143 6 127 352 208 441 5.04e-32 125
MS.gene08874.t1 MTR_6g033615 35.885 209 126 5 167 375 247 447 6.07e-32 125
MS.gene08874.t1 MTR_6g023665 26.686 341 228 6 7 332 98 431 1.16e-31 125
MS.gene08874.t1 MTR_8g009067 34.135 208 126 3 171 371 257 460 1.96e-31 124
MS.gene08874.t1 MTR_6g033660 34.874 238 134 6 130 351 207 439 3.98e-31 123
MS.gene08874.t1 MTR_0078s0060 35.052 194 115 3 167 353 253 442 1.46e-30 122
MS.gene08874.t1 MTR_3g009510 34.184 196 116 3 171 356 265 457 2.78e-30 121
MS.gene08874.t1 MTR_1g019520 33.971 209 126 4 171 371 4 208 3.26e-30 115
MS.gene08874.t1 MTR_0078s0010 36.788 193 111 3 167 352 254 442 3.45e-30 120
MS.gene08874.t1 MTR_6g033675 38.122 181 107 4 171 351 265 440 5.27e-30 120
MS.gene08874.t1 MTR_8g009050 30.796 289 173 8 97 371 187 462 6.41e-30 120
MS.gene08874.t1 MTR_4g485620 26.357 387 237 13 1 360 73 438 7.34e-30 120
MS.gene08874.t1 MTR_8g012650 37.433 187 104 3 171 345 260 445 7.59e-30 120
MS.gene08874.t1 MTR_7g013220 35.079 191 109 6 171 361 261 436 8.39e-30 119
MS.gene08874.t1 MTR_5g045970 27.493 371 231 11 3 344 102 463 1.06e-29 119
MS.gene08874.t1 MTR_8g012630 33.929 224 120 4 149 345 167 389 1.11e-29 119
MS.gene08874.t1 MTR_7g047030 36.508 189 109 3 171 352 258 442 1.42e-29 119
MS.gene08874.t1 MTR_7g047270 36.508 189 109 3 171 352 258 442 1.42e-29 119
MS.gene08874.t1 MTR_8g008970 33.654 208 127 3 171 371 257 460 1.46e-29 120
MS.gene08874.t1 MTR_8g008970 28.358 201 132 3 171 371 596 784 3.87e-20 92.8
MS.gene08874.t1 MTR_5g027210 29.508 244 142 4 118 332 204 446 1.49e-29 119
MS.gene08874.t1 MTR_8g006270 33.155 187 116 1 167 344 250 436 1.52e-29 119
MS.gene08874.t1 MTR_8g465670 26.923 364 244 8 4 351 89 446 1.71e-29 119
MS.gene08874.t1 MTR_8g071070 26.923 390 253 14 6 375 95 472 3.83e-29 118
MS.gene08874.t1 MTR_8g009055 32.857 210 128 4 171 371 257 462 6.03e-29 117
MS.gene08874.t1 MTR_8g077590 32.773 238 148 4 119 345 204 440 6.85e-29 117
MS.gene08874.t1 MTR_8g006260 30.699 329 191 12 41 345 128 443 7.83e-29 117
MS.gene08874.t1 MTR_7g013200 27.978 361 228 11 5 361 93 425 1.68e-28 115
MS.gene08874.t1 MTR_1g062380 33.333 243 133 6 127 344 226 464 1.76e-28 116
MS.gene08874.t1 MTR_8g012635 35.829 187 107 3 171 345 260 445 1.87e-28 116
MS.gene08874.t1 MTR_6g005600 33.032 221 130 4 169 375 255 471 2.26e-28 115
MS.gene08874.t1 MTR_8g006220 26.562 384 228 9 4 351 88 453 2.41e-28 115
MS.gene08874.t1 MTR_1g019510 34.737 190 112 4 171 352 255 440 2.52e-28 115
MS.gene08874.t1 MTR_8g066610 27.190 331 200 9 8 313 100 414 3.69e-28 115
MS.gene08874.t1 MTR_8g008990 27.273 396 247 13 1 371 85 464 3.87e-28 115
MS.gene08874.t1 MTR_8g012730 36.216 185 105 3 173 345 99 282 6.50e-28 112
MS.gene08874.t1 MTR_0009s0240 34.896 192 121 3 123 310 208 399 8.48e-28 114
MS.gene08874.t1 MTR_8g074550 25.964 389 233 15 1 351 88 459 1.68e-27 113
MS.gene08874.t1 MTR_5g035560 26.359 368 222 10 28 371 109 451 2.30e-27 113
MS.gene08874.t1 MTR_7g046490 32.314 229 138 7 134 349 215 439 2.43e-27 112
MS.gene08874.t1 MTR_2g059240 27.027 333 202 11 2 310 94 409 3.12e-27 112
MS.gene08874.t1 MTR_5g019580 32.889 225 128 6 150 358 241 458 7.83e-27 111
MS.gene08874.t1 MTR_5g019580 32.889 225 128 6 150 358 265 482 9.73e-27 111
MS.gene08874.t1 MTR_7g070660 27.346 373 225 11 1 344 95 450 1.63e-26 110
MS.gene08874.t1 MTR_3g069710 30.671 313 179 13 87 374 155 454 1.92e-26 110
MS.gene08874.t1 MTR_6g038230 27.168 346 208 10 25 351 110 430 2.34e-26 110
MS.gene08874.t1 MTR_8g009063 33.333 210 127 3 171 371 264 469 3.80e-26 109
MS.gene08874.t1 MTR_6g038220 27.920 351 205 13 22 351 106 429 4.81e-26 108
MS.gene08874.t1 MTR_4g031800 28.516 256 154 6 122 353 202 452 5.15e-26 109
MS.gene08874.t1 MTR_7g102490 37.097 186 103 5 171 345 278 460 1.09e-25 108
MS.gene08874.t1 MTR_6g038200 26.479 355 209 12 25 356 110 435 1.51e-25 107
MS.gene08874.t1 MTR_6g038300 33.871 186 110 5 168 353 261 433 2.56e-25 107
MS.gene08874.t1 MTR_5g035580 32.461 191 116 4 166 356 257 434 4.68e-25 106
MS.gene08874.t1 MTR_2g046750 25.895 363 233 12 28 371 120 465 4.85e-25 106
MS.gene08874.t1 MTR_7g070800 26.303 403 254 12 1 374 90 478 4.96e-25 106
MS.gene08874.t1 MTR_7g102460 36.022 186 105 5 171 345 276 458 6.38e-25 106
MS.gene08874.t1 MTR_7g055710 25.532 376 232 9 1 344 95 454 7.61e-25 105
MS.gene08874.t1 MTR_6g038240 34.239 184 107 4 168 351 261 430 8.18e-25 105
MS.gene08874.t1 MTR_7g117405 27.078 373 234 11 1 348 96 455 8.28e-25 105
MS.gene08874.t1 MTR_8g012745 29.630 243 154 5 119 346 202 442 1.78e-24 104
MS.gene08874.t1 MTR_7g102550 28.863 343 210 10 25 349 119 445 2.00e-24 104
MS.gene08874.t1 MTR_3g009490 32.353 170 102 3 197 356 3 169 2.15e-24 99.4
MS.gene08874.t1 MTR_7g013180 33.824 204 115 6 167 365 254 442 2.97e-24 103
MS.gene08874.t1 MTR_4g024020 35.079 191 109 5 167 345 274 461 3.68e-24 103
MS.gene08874.t1 MTR_7g013240 34.054 185 107 6 171 355 250 419 4.19e-24 103
MS.gene08874.t1 MTR_7g070610 25.876 371 238 8 1 344 97 457 4.29e-24 103
MS.gene08874.t1 MTR_7g102520 36.810 163 99 2 168 329 276 435 4.33e-24 103
MS.gene08874.t1 MTR_7g080950 33.690 187 110 3 167 353 253 425 6.67e-24 102
MS.gene08874.t1 MTR_5g098960 34.872 195 103 7 171 362 260 433 6.70e-24 102
MS.gene08874.t1 MTR_3g049970 27.068 266 168 7 105 352 189 446 7.10e-24 103
MS.gene08874.t1 MTR_7g070740 24.734 376 235 10 1 344 95 454 8.61e-24 102
MS.gene08874.t1 MTR_5g045960 27.128 376 236 13 10 357 106 471 8.97e-24 102
MS.gene08874.t1 MTR_5g040030 25.897 390 239 11 19 374 117 490 1.30e-23 102
MS.gene08874.t1 MTR_4g485640 25.641 351 226 10 16 342 297 636 1.40e-23 102
MS.gene08874.t1 MTR_4g128690 33.846 195 113 4 167 361 260 438 1.68e-23 101
MS.gene08874.t1 MTR_2g035040 26.346 353 217 10 28 353 25 361 1.68e-23 100
MS.gene08874.t1 MTR_4g117960 27.545 334 205 13 25 332 117 439 2.04e-23 101
MS.gene08874.t1 MTR_8g466240 26.748 329 201 10 13 314 84 399 2.18e-23 101
MS.gene08874.t1 MTR_1g107315 28.188 298 174 11 36 311 127 406 2.47e-23 101
MS.gene08874.t1 MTR_4g117980 24.691 405 257 11 3 374 95 484 2.60e-23 101
MS.gene08874.t1 MTR_4g485590 30.542 203 125 3 127 318 192 389 3.05e-23 100
MS.gene08874.t1 MTR_8g056740 23.913 276 184 6 84 347 75 336 3.85e-23 100
MS.gene08874.t1 MTR_2g040530 24.346 382 253 12 10 371 99 464 4.37e-23 100
MS.gene08874.t1 MTR_7g013260 35.542 166 98 5 171 336 251 407 4.98e-23 100
MS.gene08874.t1 MTR_4g128720 33.846 195 113 4 167 361 263 441 6.33e-23 100
MS.gene08874.t1 MTR_7g102450 31.148 244 144 7 127 348 205 446 6.96e-23 100
MS.gene08874.t1 MTR_7g070940 24.862 362 247 8 1 345 93 446 7.79e-23 100
MS.gene08874.t1 MTR_8g064880 26.706 337 207 12 36 349 130 449 9.63e-23 99.8
MS.gene08874.t1 MTR_0536s0010 24.561 399 252 11 5 374 101 479 1.14e-22 99.4
MS.gene08874.t1 MTR_5g087620 25.070 355 237 9 25 357 128 475 1.46e-22 99.4
MS.gene08874.t1 MTR_1g032490 27.726 321 185 12 36 328 129 430 1.55e-22 99.0
MS.gene08874.t1 MTR_5g090700 28.041 296 184 7 101 368 179 473 1.84e-22 99.0
MS.gene08874.t1 MTR_0536s0020 33.540 161 101 3 171 325 265 425 2.18e-22 98.6
MS.gene08874.t1 MTR_1g107365 32.418 182 105 4 171 351 303 467 4.15e-22 97.8
MS.gene08874.t1 MTR_4g095008 32.407 216 126 8 167 370 260 467 4.92e-22 97.8
MS.gene08874.t1 MTR_2g034990 33.152 184 112 4 171 343 268 451 5.14e-22 97.8
MS.gene08874.t1 MTR_7g070810 25.062 403 256 11 1 374 93 478 5.70e-22 97.4
MS.gene08874.t1 MTR_1g040310 23.114 411 260 7 5 369 102 502 7.32e-22 97.4
MS.gene08874.t1 MTR_0891s0010 27.419 248 154 7 119 352 31 266 8.08e-22 94.7
MS.gene08874.t1 MTR_3g479610 27.668 253 153 8 120 356 55 293 8.44e-22 95.1
MS.gene08874.t1 MTR_7g012120 29.412 221 143 5 167 374 266 486 9.12e-22 97.1
MS.gene08874.t1 MTR_7g070860 25.745 369 223 11 1 344 91 433 9.60e-22 96.7
MS.gene08874.t1 MTR_3g479490 30.939 181 113 5 172 352 282 450 1.21e-21 96.7
MS.gene08874.t1 MTR_5g072840 25.581 344 219 11 21 351 105 424 1.26e-21 96.3
MS.gene08874.t1 MTR_8g083280 32.016 253 145 8 111 351 200 437 1.53e-21 96.3
MS.gene08874.t1 MTR_4g094920 35.503 169 102 5 167 332 275 439 1.77e-21 96.3
MS.gene08874.t1 MTR_1g107350 26.316 342 204 13 36 352 127 445 1.78e-21 95.9
MS.gene08874.t1 MTR_3g079480 27.490 251 156 7 120 356 231 469 1.83e-21 95.9
MS.gene08874.t1 MTR_5g464760 32.105 190 115 6 167 356 284 459 1.95e-21 95.9
MS.gene08874.t1 MTR_5g004940 33.880 183 112 4 117 293 137 316 2.00e-21 95.1
MS.gene08874.t1 MTR_5g072830 24.425 348 218 12 21 351 105 424 2.17e-21 95.5
MS.gene08874.t1 MTR_4g117890 31.795 195 116 6 171 353 260 449 3.20e-21 95.1
MS.gene08874.t1 MTR_5g072820 28.514 249 147 7 116 351 194 424 3.80e-21 94.7
MS.gene08874.t1 MTR_2g035020 33.831 201 116 6 171 360 268 462 4.23e-21 95.1
MS.gene08874.t1 MTR_1g107380 28.571 273 166 10 116 371 212 472 4.26e-21 94.7
MS.gene08874.t1 MTR_8g083290 32.308 195 117 5 160 353 261 441 4.71e-21 94.7
MS.gene08874.t1 MTR_6g013440 27.451 255 152 9 114 352 220 457 5.38e-21 94.7
MS.gene08874.t1 MTR_7g080940 32.609 184 110 4 168 351 259 428 6.45e-21 94.4
MS.gene08874.t1 MTR_6g035265 28.767 219 140 5 171 374 259 476 6.96e-21 94.4
MS.gene08874.t1 MTR_5g098930 27.037 270 166 7 113 356 188 452 7.48e-21 94.0
MS.gene08874.t1 MTR_3g479520 27.823 248 153 7 119 352 224 459 7.63e-21 94.4
MS.gene08874.t1 MTR_4g008630 34.021 194 103 5 171 351 257 438 8.63e-21 94.0
MS.gene08874.t1 MTR_5g090610 25.614 285 188 9 109 372 180 461 1.13e-20 93.6
MS.gene08874.t1 MTR_5g090580 25.000 276 184 7 114 368 198 471 1.74e-20 93.2
MS.gene08874.t1 MTR_7g080935 32.609 184 110 4 168 351 259 428 1.82e-20 92.8
MS.gene08874.t1 MTR_7g102560 32.973 185 111 4 168 342 270 451 1.90e-20 93.2
MS.gene08874.t1 MTR_5g072860 25.140 358 231 9 8 345 99 439 2.10e-20 92.8
MS.gene08874.t1 MTR_2g046820 27.306 271 173 7 119 371 198 462 2.87e-20 92.4
MS.gene08874.t1 MTR_4g117950 34.932 146 91 2 168 311 249 392 3.21e-20 92.4
MS.gene08874.t1 MTR_1g029540 33.155 187 120 3 171 354 254 438 5.60e-20 91.3
MS.gene08874.t1 MTR_5g016660 25.138 362 230 10 12 344 105 454 5.68e-20 91.7
MS.gene08874.t1 MTR_8g088560 24.501 351 217 10 28 356 114 438 5.95e-20 91.3
MS.gene08874.t1 MTR_1g107360 26.295 251 158 7 118 356 207 442 7.86e-20 91.3
MS.gene08874.t1 MTR_8g090095 30.233 258 155 10 112 355 213 459 8.31e-20 90.9
MS.gene08874.t1 MTR_0288s0020 27.615 239 152 7 114 352 220 437 1.11e-19 90.5
MS.gene08874.t1 MTR_4g108250 26.184 359 228 10 1 332 98 446 1.13e-19 90.9
MS.gene08874.t1 MTR_5g464810 30.481 187 116 6 167 353 282 454 1.29e-19 90.5
MS.gene08874.t1 MTR_5g064240 30.481 187 116 6 167 353 282 454 1.29e-19 90.5
MS.gene08874.t1 MTR_5g075440 24.802 379 231 11 20 368 102 456 1.43e-19 90.1
MS.gene08874.t1 MTR_3g069690 29.167 216 134 6 137 352 230 426 1.63e-19 90.1
MS.gene08874.t1 MTR_3g084530 27.066 351 218 11 30 353 111 450 1.72e-19 90.1
MS.gene08874.t1 MTR_2g008210 34.078 179 106 6 167 344 278 445 1.80e-19 90.1
MS.gene08874.t1 MTR_5g090670 25.524 286 181 10 109 368 194 473 1.84e-19 90.1
MS.gene08874.t1 MTR_3g084540 31.383 188 122 3 167 351 266 449 2.34e-19 89.7
MS.gene08874.t1 MTR_8g064870 25.403 248 168 5 118 352 207 450 2.56e-19 89.7
MS.gene08874.t1 MTR_5g016480 29.245 212 133 6 166 368 268 471 2.59e-19 89.7
MS.gene08874.t1 MTR_5g090620 26.087 276 164 6 100 356 206 460 2.87e-19 89.4
MS.gene08874.t1 MTR_8g044140 25.568 352 230 8 5 332 64 407 3.10e-19 89.4
MS.gene08874.t1 MTR_5g072810 24.079 353 217 13 21 351 106 429 3.18e-19 89.4
MS.gene08874.t1 MTR_4g082810 36.842 133 79 2 171 300 265 395 3.65e-19 88.6
MS.gene08874.t1 MTR_6g013990 28.495 186 120 5 167 352 282 454 3.90e-19 89.0
MS.gene08874.t1 MTR_8g032950 33.854 192 113 6 168 345 263 454 4.36e-19 89.0
MS.gene08874.t1 MTR_7g470610 34.899 149 91 2 167 313 128 272 5.03e-19 86.7
MS.gene08874.t1 MTR_7g070583 34.899 149 91 2 167 313 128 272 5.03e-19 86.7
MS.gene08874.t1 MTR_7g011470 25.692 253 155 9 116 352 203 438 5.22e-19 88.6
MS.gene08874.t1 MTR_7g011470 25.692 253 155 9 116 352 207 442 6.94e-19 88.2
MS.gene08874.t1 MTR_3g479470 31.140 228 133 9 119 332 222 439 8.12e-19 88.2
MS.gene08874.t1 MTR_5g070090 25.714 280 178 11 90 356 184 446 9.08e-19 87.8
MS.gene08874.t1 MTR_7g070930 26.036 338 211 11 1 314 98 420 1.18e-18 87.8
MS.gene08874.t1 MTR_6g014170 29.570 186 118 5 167 352 266 438 1.18e-18 87.4
MS.gene08874.t1 MTR_8g059425 27.092 251 154 10 116 352 219 454 1.29e-18 87.4
MS.gene08874.t1 MTR_6g035185 25.330 379 240 12 25 372 117 483 1.29e-18 87.4
MS.gene08874.t1 MTR_5g039900 23.604 394 255 9 12 374 108 486 1.31e-18 87.4
MS.gene08874.t1 MTR_5g090660 27.230 213 138 6 171 368 259 469 1.99e-18 87.0
MS.gene08874.t1 MTR_5g067170 29.018 224 146 5 164 374 259 482 2.27e-18 86.7
MS.gene08874.t1 MTR_7g070780 30.108 186 116 3 169 344 273 454 2.31e-18 86.7
MS.gene08874.t1 MTR_5g070040 24.679 312 203 12 40 332 133 431 2.32e-18 86.7
MS.gene08874.t1 MTR_6g013900 28.495 186 120 5 167 352 283 455 2.59e-18 86.7
MS.gene08874.t1 MTR_6g014220 25.088 283 169 11 95 352 190 454 2.73e-18 86.7
MS.gene08874.t1 MTR_7g080900 30.387 181 113 4 171 351 264 431 2.84e-18 86.3
MS.gene08874.t1 MTR_2g083440 40.196 102 59 2 274 374 11 111 2.85e-18 80.1
MS.gene08874.t1 MTR_4g082820 34.351 131 84 1 172 300 263 393 3.25e-18 86.3
MS.gene08874.t1 MTR_4g118000 28.440 218 134 6 171 372 256 467 3.50e-18 86.3
MS.gene08874.t1 MTR_8g009840 28.638 213 130 5 174 371 316 521 3.55e-18 86.3
MS.gene08874.t1 MTR_6g014250 25.098 255 161 8 114 353 216 455 4.01e-18 85.9
MS.gene08874.t1 MTR_7g039550 28.159 277 146 9 134 374 5 264 4.09e-18 84.0
MS.gene08874.t1 MTR_5g090630 27.511 229 149 5 156 368 235 462 5.61e-18 85.5
MS.gene08874.t1 MTR_1g107285 24.556 338 210 11 36 352 127 440 5.67e-18 85.5
MS.gene08874.t1 MTR_6g011340 28.495 186 120 5 167 352 284 456 6.12e-18 85.5
MS.gene08874.t1 MTR_6g014020 27.092 251 154 9 116 352 221 456 6.12e-18 85.5
MS.gene08874.t1 MTR_6g014050 28.804 184 118 5 169 352 287 457 6.13e-18 85.5
MS.gene08874.t1 MTR_1g107375 31.148 183 109 6 171 352 264 430 6.44e-18 85.5
MS.gene08874.t1 MTR_8g007585 28.866 194 123 6 161 352 188 368 8.00e-18 84.7
MS.gene08874.t1 MTR_3g084520 31.373 204 128 5 153 353 256 450 1.28e-17 84.3
MS.gene08874.t1 MTR_6g014270 27.957 186 121 5 167 352 283 455 1.57e-17 84.3
MS.gene08874.t1 MTR_6g013920 25.000 252 160 7 115 352 219 455 1.72e-17 84.0
MS.gene08874.t1 MTR_6g014200 27.957 186 121 5 167 352 281 453 1.72e-17 84.0
MS.gene08874.t1 MTR_3g031400 26.230 244 157 5 116 351 197 425 1.78e-17 84.0
MS.gene08874.t1 MTR_0036s0220 27.273 187 122 6 167 353 282 454 1.82e-17 84.0
MS.gene08874.t1 MTR_4g079280 31.818 154 81 5 5 152 48 183 2.78e-17 79.3
MS.gene08874.t1 MTR_3g008010 27.473 182 119 5 171 352 286 454 3.01e-17 83.6
MS.gene08874.t1 MTR_6g013450 27.957 186 121 5 167 352 285 457 4.35e-17 82.8
MS.gene08874.t1 MTR_6g035295 22.821 390 265 10 12 374 107 487 4.89e-17 82.8
MS.gene08874.t1 MTR_7g070910 24.064 374 241 12 1 344 95 455 5.76e-17 82.4
MS.gene08874.t1 MTR_7g070870 25.305 328 212 9 1 313 103 412 7.28e-17 82.0
MS.gene08874.t1 MTR_6g014187 25.896 251 157 9 116 352 221 456 7.28e-17 82.4
MS.gene08874.t1 MTR_5g031860 32.143 140 89 3 171 310 280 413 8.45e-17 82.0
MS.gene08874.t1 MTR_4g064987 25.449 334 200 10 28 342 112 415 1.42e-16 81.3
MS.gene08874.t1 MTR_5g029800 31.098 164 108 3 167 325 260 423 1.60e-16 81.3
MS.gene08874.t1 MTR_7g071040 24.129 373 242 12 1 344 101 461 1.78e-16 81.3
MS.gene08874.t1 MTR_6g014190 26.344 186 124 5 167 352 91 263 1.88e-16 79.3
MS.gene08874.t1 MTR_6g013960 26.203 187 125 5 167 353 284 457 2.17e-16 80.9
MS.gene08874.t1 MTR_6g014040 28.495 186 120 5 167 352 285 457 3.03e-16 80.5
MS.gene08874.t1 MTR_5g090600 23.985 271 176 8 114 368 194 450 3.19e-16 80.1
MS.gene08874.t1 MTR_6g014150 24.425 348 222 14 28 351 122 452 3.49e-16 80.1
MS.gene08874.t1 MTR_2086s0010 27.500 160 104 4 193 352 1 148 3.90e-16 76.3
MS.gene08874.t1 MTR_1996s0010 27.500 160 104 4 193 352 1 148 3.90e-16 76.3
MS.gene08874.t1 MTR_3g031450 25.207 242 154 5 116 345 195 421 7.02e-16 79.3
MS.gene08874.t1 MTR_5g031830 33.566 143 83 4 171 310 281 414 8.35e-16 79.0
MS.gene08874.t1 MTR_5g058320 27.419 186 122 5 167 352 269 441 8.52e-16 79.0
MS.gene08874.t1 MTR_4g064987 25.294 340 199 11 28 342 112 421 3.01e-15 77.4
MS.gene08874.t1 MTR_6g014300 24.380 242 156 8 116 352 223 442 3.68e-15 77.0
MS.gene08874.t1 MTR_6g014240 25.946 185 124 5 167 351 251 422 4.82e-15 76.6
MS.gene08874.t1 MTR_5g031840 24.752 303 192 10 29 310 118 405 5.19e-15 76.6
MS.gene08874.t1 MTR_7g071050 24.363 353 195 8 1 332 97 398 7.00e-15 75.9
MS.gene08874.t1 MTR_5g090690 32.432 148 86 5 156 290 172 318 1.54e-14 74.7
MS.gene08874.t1 MTR_6g014310 23.381 278 179 9 95 352 194 457 1.72e-14 75.1
MS.gene08874.t1 MTR_4g094220 27.473 182 120 5 171 352 286 455 2.48e-14 74.7
MS.gene08874.t1 MTR_0536s0030 36.792 106 63 2 224 325 192 297 2.73e-14 73.9
MS.gene08874.t1 MTR_6g014290 25.824 182 122 5 171 352 286 454 7.22e-14 73.2
MS.gene08874.t1 MTR_0477s0010 26.882 186 123 5 167 352 121 293 1.31e-13 71.2
MS.gene08874.t1 MTR_6g078320 28.365 208 135 5 150 348 252 454 3.01e-13 71.2
MS.gene08874.t1 MTR_8g028755 26.570 207 107 6 127 333 61 222 1.82e-12 67.0
MS.gene08874.t1 MTR_5g072850 26.570 207 127 6 116 312 149 340 3.04e-12 67.8
MS.gene08874.t1 MTR_8g043470 27.322 183 122 5 171 352 186 358 5.34e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08874.t1 AT5G54010 39.894 376 203 9 5 374 88 446 4.36e-88 273
MS.gene08874.t1 AT2G22930 37.838 370 209 8 5 372 88 438 6.13e-83 259
MS.gene08874.t1 AT4G27570 37.895 380 204 10 5 374 89 446 6.50e-83 260
MS.gene08874.t1 AT1G64910 38.606 373 206 11 5 374 88 440 7.05e-83 259
MS.gene08874.t1 AT5G53990 37.634 372 211 9 5 374 88 440 1.19e-82 259
MS.gene08874.t1 AT4G27560 37.337 383 202 11 5 374 89 446 1.15e-81 257
MS.gene08874.t1 AT5G54060 37.097 372 211 10 5 364 95 455 1.30e-79 252
MS.gene08874.t1 AT4G09500 37.027 370 212 9 5 372 88 438 3.15e-79 250
MS.gene08874.t1 AT3G29630 36.436 376 213 9 4 373 87 442 3.68e-78 248
MS.gene08874.t1 AT1G64920 35.561 374 214 11 8 374 91 444 2.33e-76 243
MS.gene08874.t1 AT1G50580 34.865 370 215 9 8 372 91 439 9.49e-74 236
MS.gene08874.t1 AT3G29630 35.389 373 195 10 4 373 87 416 7.29e-71 228
MS.gene08874.t1 AT4G09500 34.959 369 196 10 5 372 88 413 1.50e-67 219
MS.gene08874.t1 AT2G22590 31.016 374 238 8 8 371 103 466 7.24e-53 182
MS.gene08874.t1 AT5G65550 29.839 372 237 9 5 363 91 451 3.03e-47 167
MS.gene08874.t1 AT5G49690 29.058 382 239 10 4 373 92 453 6.09e-47 166
MS.gene08874.t1 AT4G36770 36.620 213 119 5 150 352 234 440 2.13e-32 127
MS.gene08874.t1 AT4G34138 27.247 356 226 9 8 345 112 452 6.15e-31 123
MS.gene08874.t1 AT2G31750 28.462 390 223 16 13 371 90 454 8.97e-31 122
MS.gene08874.t1 AT2G31750 28.462 390 223 16 13 371 90 454 1.15e-30 122
MS.gene08874.t1 AT4G01070 35.052 194 114 3 167 352 255 444 1.26e-30 122
MS.gene08874.t1 AT4G34135 31.624 234 139 3 116 333 214 442 7.79e-30 120
MS.gene08874.t1 AT2G15490 25.926 351 241 6 12 348 110 455 1.98e-29 119
MS.gene08874.t1 AT4G34131 27.933 358 226 8 13 352 114 457 1.25e-28 116
MS.gene08874.t1 AT2G31790 30.247 324 182 11 75 371 150 456 1.30e-28 116
MS.gene08874.t1 AT2G15490 25.926 351 238 7 12 348 110 452 3.06e-28 115
MS.gene08874.t1 AT1G01420 32.258 248 150 6 118 352 201 443 3.44e-28 115
MS.gene08874.t1 AT1G01420 32.258 248 150 6 118 352 204 446 3.50e-28 115
MS.gene08874.t1 AT1G05675 26.857 350 209 11 25 351 103 428 8.32e-28 114
MS.gene08874.t1 AT2G36750 26.816 358 237 8 4 348 97 442 9.98e-28 114
MS.gene08874.t1 AT2G18560 30.918 207 131 4 150 351 153 352 2.11e-27 112
MS.gene08874.t1 AT2G18570 31.892 185 120 3 172 351 259 442 4.55e-27 112
MS.gene08874.t1 AT3G16520 32.967 182 114 3 171 351 261 435 4.68e-27 112
MS.gene08874.t1 AT3G16520 32.967 182 114 3 171 351 261 435 4.84e-27 111
MS.gene08874.t1 AT3G16520 32.967 182 114 3 171 351 261 435 5.83e-27 111
MS.gene08874.t1 AT1G05680 26.286 350 211 12 25 351 103 428 9.39e-27 110
MS.gene08874.t1 AT2G15480 28.254 315 200 8 12 311 113 416 1.99e-26 110
MS.gene08874.t1 AT1G01390 31.970 269 168 8 119 373 202 469 2.11e-26 110
MS.gene08874.t1 AT2G15480 28.254 315 200 8 12 311 113 416 2.31e-26 110
MS.gene08874.t1 AT1G01390 31.970 269 168 8 119 373 219 486 2.51e-26 110
MS.gene08874.t1 AT5G05880 28.631 241 156 7 117 352 196 425 4.33e-26 109
MS.gene08874.t1 AT5G05870 29.885 261 163 7 84 338 174 420 2.13e-25 107
MS.gene08874.t1 AT5G05890 28.926 242 156 6 116 352 199 429 2.16e-25 107
MS.gene08874.t1 AT2G36760 36.842 190 107 4 167 345 275 462 2.33e-25 107
MS.gene08874.t1 AT3G50740 30.928 194 119 2 171 352 259 449 2.77e-25 107
MS.gene08874.t1 AT2G16890 27.966 236 152 5 118 346 213 437 5.05e-25 106
MS.gene08874.t1 AT5G12890 26.957 345 229 9 27 356 128 464 6.29e-25 106
MS.gene08874.t1 AT2G36780 31.950 241 140 6 127 345 224 462 1.10e-24 105
MS.gene08874.t1 AT2G30150 27.434 339 216 11 25 352 94 413 1.71e-24 104
MS.gene08874.t1 AT2G30150 27.434 339 216 11 25 352 110 429 2.33e-24 104
MS.gene08874.t1 AT5G66690 33.696 184 108 2 171 342 254 435 4.56e-24 103
MS.gene08874.t1 AT2G29730 27.273 308 181 9 48 332 136 423 4.99e-24 103
MS.gene08874.t1 AT2G43820 29.924 264 145 8 114 355 181 426 5.84e-24 103
MS.gene08874.t1 AT5G03490 31.844 179 110 2 171 349 273 439 5.96e-24 103
MS.gene08874.t1 AT3G53150 27.350 351 223 11 8 332 114 458 6.53e-24 103
MS.gene08874.t1 AT2G36770 27.295 403 245 15 7 373 104 494 7.78e-24 103
MS.gene08874.t1 AT1G10400 28.992 238 145 7 118 346 210 432 1.20e-23 102
MS.gene08874.t1 AT2G36800 25.876 371 236 12 7 348 102 462 2.13e-23 101
MS.gene08874.t1 AT3G22250 36.082 194 99 8 171 360 274 446 3.03e-23 101
MS.gene08874.t1 AT5G05860 30.328 244 154 5 114 352 192 424 4.57e-23 100
MS.gene08874.t1 AT1G73880 30.000 190 123 3 127 309 220 406 5.06e-23 100
MS.gene08874.t1 AT3G53160 24.586 362 237 9 8 342 99 451 6.42e-23 100
MS.gene08874.t1 AT2G16890 28.037 214 139 4 118 324 213 418 6.84e-23 99.8
MS.gene08874.t1 AT3G11340 30.290 241 152 6 117 352 192 421 1.05e-22 99.4
MS.gene08874.t1 AT1G78270 31.551 187 116 4 167 353 283 457 1.23e-22 99.4
MS.gene08874.t1 AT5G59590 28.173 323 197 14 43 352 126 426 1.35e-22 99.0
MS.gene08874.t1 AT2G29740 29.084 251 163 9 116 356 214 459 1.76e-22 99.0
MS.gene08874.t1 AT2G29750 30.165 242 150 8 116 345 214 448 2.65e-22 98.6
MS.gene08874.t1 AT1G07260 25.970 335 219 11 39 356 134 456 3.09e-22 98.2
MS.gene08874.t1 AT3G21750 27.317 410 238 16 5 368 74 469 4.19e-22 97.8
MS.gene08874.t1 AT1G51210 28.500 200 120 4 120 310 212 397 4.70e-22 97.4
MS.gene08874.t1 AT2G26480 24.576 354 230 10 26 366 102 431 6.12e-22 97.1
MS.gene08874.t1 AT3G46680 27.193 342 210 11 28 354 111 428 9.92e-22 96.7
MS.gene08874.t1 AT5G14860 29.487 234 144 8 123 345 225 448 1.24e-21 96.7
MS.gene08874.t1 AT2G43840 32.967 182 107 5 173 353 257 424 1.42e-21 96.3
MS.gene08874.t1 AT2G43840 32.967 182 107 5 173 353 257 424 1.42e-21 96.3
MS.gene08874.t1 AT1G05560 35.106 188 112 4 173 356 301 482 1.51e-21 96.7
MS.gene08874.t1 AT1G05560 35.106 188 112 4 173 356 251 432 1.61e-21 96.3
MS.gene08874.t1 AT5G59580 28.308 325 198 13 43 354 124 426 2.65e-21 95.5
MS.gene08874.t1 AT2G30140 26.786 336 220 10 25 352 111 428 2.97e-21 95.1
MS.gene08874.t1 AT1G07250 26.022 269 183 8 114 371 209 472 3.30e-21 95.1
MS.gene08874.t1 AT5G26310 26.538 260 165 5 114 352 188 442 4.26e-21 95.1
MS.gene08874.t1 AT3G46670 29.362 235 151 7 124 354 204 427 8.67e-21 94.0
MS.gene08874.t1 AT2G30140 29.870 231 143 6 127 352 211 427 9.24e-21 94.0
MS.gene08874.t1 AT3G21790 25.824 364 234 10 40 374 129 485 1.10e-20 94.0
MS.gene08874.t1 AT2G36970 28.571 245 159 7 116 356 219 451 1.20e-20 93.6
MS.gene08874.t1 AT2G29710 30.457 197 124 4 121 310 208 398 2.04e-20 92.8
MS.gene08874.t1 AT4G15480 29.508 244 153 9 119 351 219 454 2.05e-20 92.8
MS.gene08874.t1 AT3G55700 25.073 343 232 11 40 373 126 452 4.01e-20 92.0
MS.gene08874.t1 AT5G38040 27.636 275 184 7 103 371 184 449 4.75e-20 91.7
MS.gene08874.t1 AT1G24100 30.583 206 121 5 171 367 266 458 5.89e-20 91.3
MS.gene08874.t1 AT4G15280 29.224 219 134 6 171 371 294 509 6.29e-20 91.7
MS.gene08874.t1 AT4G15280 29.224 219 134 6 171 371 262 477 6.38e-20 91.3
MS.gene08874.t1 AT4G15260 30.093 216 131 6 171 368 142 355 8.46e-20 90.1
MS.gene08874.t1 AT3G21560 32.240 183 113 6 171 352 277 449 8.54e-20 91.3
MS.gene08874.t1 AT1G22400 31.472 197 121 6 167 363 285 467 1.10e-19 90.9
MS.gene08874.t1 AT2G28080 31.461 178 116 4 167 344 275 446 1.29e-19 90.5
MS.gene08874.t1 AT5G05900 26.271 236 151 6 122 352 207 424 2.22e-19 89.7
MS.gene08874.t1 AT3G46700 26.844 339 216 13 28 354 105 423 2.56e-19 89.4
MS.gene08874.t1 AT1G06000 29.091 275 172 9 114 371 165 433 3.01e-19 89.4
MS.gene08874.t1 AT1G05530 26.531 343 215 10 28 353 110 432 3.30e-19 89.4
MS.gene08874.t1 AT1G22380 24.576 354 220 12 28 353 123 457 6.22e-19 88.6
MS.gene08874.t1 AT5G17050 30.601 183 111 5 171 353 268 434 7.88e-19 88.2
MS.gene08874.t1 AT3G46690 26.822 343 211 11 28 354 110 428 8.91e-19 87.8
MS.gene08874.t1 AT2G36790 25.401 374 239 12 4 348 100 462 9.29e-19 88.2
MS.gene08874.t1 AT4G15550 34.911 169 104 4 169 332 267 434 9.49e-19 87.8
MS.gene08874.t1 AT4G14090 30.808 198 123 6 167 361 255 441 1.00e-18 87.8
MS.gene08874.t1 AT3G21760 24.932 369 225 13 40 371 131 484 1.25e-18 87.8
MS.gene08874.t1 AT3G46660 31.000 200 125 6 157 354 246 434 2.23e-18 86.7
MS.gene08874.t1 AT3G55710 29.268 205 130 6 173 373 263 456 3.28e-18 86.3
MS.gene08874.t1 AT1G07240 29.915 234 141 9 116 332 210 437 4.06e-18 85.9
MS.gene08874.t1 AT1G22360 30.481 187 117 5 167 353 281 454 5.84e-18 85.5
MS.gene08874.t1 AT3G02100 24.665 373 218 12 28 371 125 463 1.15e-17 84.7
MS.gene08874.t1 AT3G21780 26.267 217 143 6 171 371 257 472 1.99e-17 84.0
MS.gene08874.t1 AT1G30530 26.970 330 198 14 40 354 128 429 2.86e-17 83.6
MS.gene08874.t1 AT1G22340 24.859 354 220 12 28 353 123 458 3.17e-17 83.6
MS.gene08874.t1 AT4G15500 31.122 196 119 6 158 352 259 439 3.29e-17 83.2
MS.gene08874.t1 AT5G17030 24.800 250 163 8 111 353 202 433 6.17e-17 82.4
MS.gene08874.t1 AT3G21800 27.778 216 136 6 171 368 263 476 7.30e-17 82.4
MS.gene08874.t1 AT5G38010 26.860 242 155 6 124 360 209 433 1.22e-16 81.6
MS.gene08874.t1 AT5G17040 24.696 247 161 6 114 353 189 417 1.67e-16 80.9
MS.gene08874.t1 AT5G17040 24.696 247 161 6 114 353 87 315 2.34e-16 79.7
MS.gene08874.t1 AT2G23250 25.000 236 153 6 110 331 169 394 2.27e-15 77.4
MS.gene08874.t1 AT1G22370 32.624 141 90 3 171 311 113 248 2.64e-15 76.3
MS.gene08874.t1 AT3G46720 25.948 343 202 12 27 354 114 419 6.34e-15 76.3
MS.gene08874.t1 AT1G22370 32.414 145 93 3 167 311 279 418 6.73e-15 76.3
MS.gene08874.t1 AT4G15490 28.718 195 123 6 158 351 263 442 1.05e-14 75.9
MS.gene08874.t1 AT2G23260 27.950 161 108 2 171 331 260 412 1.20e-14 75.5
MS.gene08874.t1 AT1G22360 31.724 145 94 3 167 311 281 420 1.52e-14 75.1
MS.gene08874.t1 AT3G46650 26.205 332 209 11 28 354 111 411 1.28e-13 72.4

Find 64 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGTCAAAGAAAATGAAAT+TGG 0.234927 4.2:-44354988 None:intergenic
GGGTTTAAGTTCAAACAAAA+TGG 0.272643 4.2:-44354967 None:intergenic
GATTTAGCATTGAGATTTGA+TGG 0.276937 4.2:-44355569 None:intergenic
TGAAGGGAAAGCTTGGAATT+TGG 0.278368 4.2:-44355182 None:intergenic
CATAAAATCTGTTTACTTCT+CGG 0.280321 4.2:+44355049 MS.gene08874:CDS
GGTTGCGCAGTTGAAGTCTT+TGG 0.300345 4.2:+44356015 MS.gene08874:CDS
CAAATCAATGAACTAGCAAT+TGG 0.338909 4.2:+44355503 MS.gene08874:CDS
ATATTGCACTCGGGCATGTT+TGG 0.367689 4.2:+44354900 None:intergenic
CTTAGAAAGAGTGAAGAATA+GGG 0.369923 4.2:+44355622 MS.gene08874:CDS
TCTTAGAAAGAGTGAAGAAT+AGG 0.376680 4.2:+44355621 MS.gene08874:CDS
TCCTCAAGCAGGTCCATTGA+TGG 0.378534 4.2:-44355395 None:intergenic
TCAGAAAGAGGAATTGTTAG+AGG 0.385332 4.2:+44355871 MS.gene08874:CDS
CTTTATGAAAGTTAAAAGAT+TGG 0.392468 4.2:-44355241 None:intergenic
GCTCAAGAGTTGCAAGGAAA+TGG 0.394591 4.2:+44355298 MS.gene08874:CDS
GGGTGTTATGTTTGTCATGC+TGG 0.399640 4.2:+44355701 MS.gene08874:CDS
TTCAAGACTTGATGATACTA+AGG 0.405834 4.2:+44355109 MS.gene08874:CDS
AGGCTGGGGTAGAGGTAAAT+AGG 0.410897 4.2:+44355828 MS.gene08874:CDS
AGCAGGTCCATTGATGGCTC+TGG 0.424734 4.2:-44355389 None:intergenic
TCAGTGATATTGTGCTCCTT+TGG 0.432139 4.2:+44355455 MS.gene08874:CDS
ACTCTTTCTAAGAACCCTTT+CGG 0.437893 4.2:-44355611 None:intergenic
CACAATATCACTGACTTGGT+TGG 0.444908 4.2:-44355446 None:intergenic
GAGAAAATCATATGAAATTG+AGG 0.444938 4.2:+44355945 MS.gene08874:CDS
GAACAAATTCATCACAGATC+TGG 0.450684 4.2:+44355994 MS.gene08874:CDS
ATGTCAAAGAAAATGAAATT+GGG 0.453198 4.2:-44354987 None:intergenic
TCTTTGACATTGCAACAAGT+TGG 0.469845 4.2:+44355000 MS.gene08874:CDS
ACAATATCACTGACTTGGTT+GGG 0.479357 4.2:-44355445 None:intergenic
AAAATTTAAGACTAAAATGA+AGG 0.481057 4.2:-44355546 None:intergenic
AGAAAATCATATGAAATTGA+GGG 0.481923 4.2:+44355946 MS.gene08874:CDS
GTGGAAGTTGATAAAGAGCC+AGG 0.485626 4.2:+44355911 MS.gene08874:CDS
GAAGGTTTGAAGGGAAAGCT+TGG 0.487609 4.2:-44355189 None:intergenic
ATTGCTGATGATGTGAAGGC+TGG 0.488833 4.2:+44355812 MS.gene08874:CDS
AAATCAATGAACTAGCAATT+GGG 0.504857 4.2:+44355504 MS.gene08874:CDS
GTAAATAGGAAAGATGAAGA+TGG 0.505924 4.2:+44355842 MS.gene08874:CDS
ACATAGGTAAGATGCTGAAA+TGG 0.506674 4.2:-44355081 None:intergenic
TAGAAAGAGCATTACCGAAA+GGG 0.510199 4.2:+44355597 MS.gene08874:CDS
TTTGGCTTGGAAGGTTTGAA+GGG 0.514232 4.2:-44355198 None:intergenic
AGAGGCTGTGAAAACTGTTA+TGG 0.529571 4.2:+44355889 MS.gene08874:CDS
GGGAAGAGACATCACTTATG+AGG 0.530994 4.2:+44355130 MS.gene08874:CDS
TAGAAATGTTTCACTACCAA+AGG 0.536894 4.2:-44355471 None:intergenic
CAATGAACTAGCAATTGGGT+TGG 0.538714 4.2:+44355508 MS.gene08874:CDS
GGGGAATTGTACATAGTGGT+TGG 0.539769 4.2:+44355642 MS.gene08874:CDS
AATTTGGAAAATACCCAAGT+GGG 0.540057 4.2:-44355166 None:intergenic
ACTTGTTCCAGAGCCATCAA+TGG 0.543678 4.2:+44355382 MS.gene08874:CDS
TTGCTGATGATGTGAAGGCT+GGG 0.546778 4.2:+44355813 MS.gene08874:CDS
TGATGTGAAGGCTGGGGTAG+AGG 0.553963 4.2:+44355820 MS.gene08874:CDS
TTGGTGTTGCTACCTTTCAA+AGG 0.559277 4.2:+44355764 MS.gene08874:CDS
TATAGTTAATGATTGTCAGT+TGG 0.561220 4.2:+44355745 MS.gene08874:CDS
TTAGAAAGAGTGAAGAATAG+GGG 0.561511 4.2:+44355623 MS.gene08874:CDS
TTGATAAAGAGCCAGGAAGA+CGG 0.565760 4.2:+44355918 MS.gene08874:CDS
CAAGTCTTGAAGATGAACAT+AGG 0.568467 4.2:-44355097 None:intergenic
GCCATCAATGGACCTGCTTG+AGG 0.577803 4.2:+44355394 MS.gene08874:CDS
AATAGGGGAATTGTACATAG+TGG 0.586788 4.2:+44355638 MS.gene08874:CDS
TTAGAAAGAGCATTACCGAA+AGG 0.599514 4.2:+44355596 MS.gene08874:CDS
ACTCATTGCTGATGATGTGA+AGG 0.599543 4.2:+44355808 MS.gene08874:CDS
AATAGTGCTCAAGAGTTGCA+AGG 0.600108 4.2:+44355292 MS.gene08874:CDS
GGAGCACAATATCACTGACT+TGG 0.606129 4.2:-44355450 None:intergenic
TCAAGACTTGATGATACTAA+GGG 0.608279 4.2:+44355110 MS.gene08874:CDS
AAATTTAAGACTAAAATGAA+GGG 0.611861 4.2:-44355545 None:intergenic
GGCTGTGAAAACTGTTATGG+TGG 0.612934 4.2:+44355892 MS.gene08874:CDS
AAGAGTTGCAAGGAAATGGA+AGG 0.626085 4.2:+44355302 MS.gene08874:CDS
TTTGGAAAATACCCAAGTGG+GGG 0.640667 4.2:-44355164 None:intergenic
TGCTGATGATGTGAAGGCTG+GGG 0.644081 4.2:+44355814 MS.gene08874:CDS
GAATTTGGAAAATACCCAAG+TGG 0.644480 4.2:-44355167 None:intergenic
ATTTGGAAAATACCCAAGTG+GGG 0.662601 4.2:-44355165 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTTAAGACTAAAATGA+AGG - chr4.2:44355549-44355568 None:intergenic 15.0%
!!! AAATTTAAGACTAAAATGAA+GGG - chr4.2:44355548-44355567 None:intergenic 15.0%
!!! TTTTGAAAATAATCTAGATA+AGG - chr4.2:44355329-44355348 None:intergenic 15.0%
!! AATGTCAAAGAAAATGAAAT+TGG - chr4.2:44354991-44355010 None:intergenic 20.0%
!! AGAAAATCATATGAAATTGA+GGG + chr4.2:44355946-44355965 MS.gene08874:CDS 20.0%
!! ATGTCAAAGAAAATGAAATT+GGG - chr4.2:44354990-44355009 None:intergenic 20.0%
!! CTTTATGAAAGTTAAAAGAT+TGG - chr4.2:44355244-44355263 None:intergenic 20.0%
! AAATCAATGAACTAGCAATT+GGG + chr4.2:44355504-44355523 MS.gene08874:CDS 25.0%
! CATAAAATCTGTTTACTTCT+CGG + chr4.2:44355049-44355068 MS.gene08874:CDS 25.0%
! GAGAAAATCATATGAAATTG+AGG + chr4.2:44355945-44355964 MS.gene08874:CDS 25.0%
! TATAGTTAATGATTGTCAGT+TGG + chr4.2:44355745-44355764 MS.gene08874:CDS 25.0%
!! GAGTGCTATGAAAATATTTT+TGG - chr4.2:44355219-44355238 None:intergenic 25.0%
!!! AAAGAACTGGTTTTTCAAAT+TGG - chr4.2:44355352-44355371 None:intergenic 25.0%
!!! CTATGAAAATATTTTTGGCT+TGG - chr4.2:44355214-44355233 None:intergenic 25.0%
AAAAACTGATCACCTTTGAA+AGG - chr4.2:44355779-44355798 None:intergenic 30.0%
AATTTGGAAAATACCCAAGT+GGG - chr4.2:44355169-44355188 None:intergenic 30.0%
CAAATCAATGAACTAGCAAT+TGG + chr4.2:44355503-44355522 MS.gene08874:CDS 30.0%
CTTAGAAAGAGTGAAGAATA+GGG + chr4.2:44355622-44355641 MS.gene08874:CDS 30.0%
GTAAATAGGAAAGATGAAGA+TGG + chr4.2:44355842-44355861 MS.gene08874:CDS 30.0%
TAGAAATGTTTCACTACCAA+AGG - chr4.2:44355474-44355493 None:intergenic 30.0%
TCTTAGAAAGAGTGAAGAAT+AGG + chr4.2:44355621-44355640 MS.gene08874:CDS 30.0%
TTAGAAAGAGTGAAGAATAG+GGG + chr4.2:44355623-44355642 MS.gene08874:CDS 30.0%
TTGAGGAAAAATGGATGAAA+TGG + chr4.2:44355411-44355430 MS.gene08874:CDS 30.0%
! GAAATTGAGGGAGTTTTTAT+TGG + chr4.2:44355958-44355977 MS.gene08874:CDS 30.0%
! GATTTAGCATTGAGATTTGA+TGG - chr4.2:44355572-44355591 None:intergenic 30.0%
! GGGTTTAAGTTCAAACAAAA+TGG - chr4.2:44354970-44354989 None:intergenic 30.0%
! TCAAGACTTGATGATACTAA+GGG + chr4.2:44355110-44355129 MS.gene08874:CDS 30.0%
! TTCAAGACTTGATGATACTA+AGG + chr4.2:44355109-44355128 MS.gene08874:CDS 30.0%
!! ATTTTAAAAATCCCCCACTT+GGG + chr4.2:44355153-44355172 MS.gene08874:CDS 30.0%
!!! AGATGGATTTTTTCAGAAAG+AGG + chr4.2:44355859-44355878 MS.gene08874:CDS 30.0%
!!! CAAGTTCAGAAGCTATTTTT+GGG - chr4.2:44355028-44355047 None:intergenic 30.0%
!!! GAAAAACCAGTTCTTTTTTC+TGG + chr4.2:44355356-44355375 MS.gene08874:CDS 30.0%
!!! GAAAATATTTTTGGCTTGGA+AGG - chr4.2:44355210-44355229 None:intergenic 30.0%
AATAGGGGAATTGTACATAG+TGG + chr4.2:44355638-44355657 MS.gene08874:CDS 35.0%
ACATAGGTAAGATGCTGAAA+TGG - chr4.2:44355084-44355103 None:intergenic 35.0%
AGTACTCCAGAAAAAAGAAC+TGG - chr4.2:44355365-44355384 None:intergenic 35.0%
ATTTGGAAAATACCCAAGTG+GGG - chr4.2:44355168-44355187 None:intergenic 35.0%
CAAGTCTTGAAGATGAACAT+AGG - chr4.2:44355100-44355119 None:intergenic 35.0%
CCAAAAATAGCTTCTGAACT+TGG + chr4.2:44355026-44355045 MS.gene08874:CDS 35.0%
GAACAAATTCATCACAGATC+TGG + chr4.2:44355994-44356013 MS.gene08874:CDS 35.0%
GAATTTGGAAAATACCCAAG+TGG - chr4.2:44355170-44355189 None:intergenic 35.0%
TCAGAAAGAGGAATTGTTAG+AGG + chr4.2:44355871-44355890 MS.gene08874:CDS 35.0%
TCTTTGACATTGCAACAAGT+TGG + chr4.2:44355000-44355019 MS.gene08874:CDS 35.0%
! ACTCTTTCTAAGAACCCTTT+CGG - chr4.2:44355614-44355633 None:intergenic 35.0%
! GAGGGAGTTTTTATTGGATA+AGG + chr4.2:44355964-44355983 MS.gene08874:CDS 35.0%
!! ACAATATCACTGACTTGGTT+GGG - chr4.2:44355448-44355467 None:intergenic 35.0%
!! CCAAGTTCAGAAGCTATTTT+TGG - chr4.2:44355029-44355048 None:intergenic 35.0%
!! GATTTTAAAAATCCCCCACT+TGG + chr4.2:44355152-44355171 MS.gene08874:CDS 35.0%
!! TAGAAAGAGCATTACCGAAA+GGG + chr4.2:44355597-44355616 MS.gene08874:CDS 35.0%
!! TTAGAAAGAGCATTACCGAA+AGG + chr4.2:44355596-44355615 MS.gene08874:CDS 35.0%
!!! TTTTGAAGCACTCAAGTGTT+GGG + chr4.2:44355681-44355700 MS.gene08874:CDS 35.0%
AAGAGTTGCAAGGAAATGGA+AGG + chr4.2:44355302-44355321 MS.gene08874:CDS 40.0%
AATAGTGCTCAAGAGTTGCA+AGG + chr4.2:44355292-44355311 MS.gene08874:CDS 40.0%
AGAGGCTGTGAAAACTGTTA+TGG + chr4.2:44355889-44355908 MS.gene08874:CDS 40.0%
CAATGAACTAGCAATTGGGT+TGG + chr4.2:44355508-44355527 MS.gene08874:CDS 40.0%
TCAGTGATATTGTGCTCCTT+TGG + chr4.2:44355455-44355474 MS.gene08874:CDS 40.0%
TGAAGGGAAAGCTTGGAATT+TGG - chr4.2:44355185-44355204 None:intergenic 40.0%
TTGATAAAGAGCCAGGAAGA+CGG + chr4.2:44355918-44355937 MS.gene08874:CDS 40.0%
TTTGGAAAATACCCAAGTGG+GGG - chr4.2:44355167-44355186 None:intergenic 40.0%
! ACTCATTGCTGATGATGTGA+AGG + chr4.2:44355808-44355827 MS.gene08874:CDS 40.0%
! TTTTCTCTTATCCGTCTTCC+TGG - chr4.2:44355932-44355951 None:intergenic 40.0%
!! CACAATATCACTGACTTGGT+TGG - chr4.2:44355449-44355468 None:intergenic 40.0%
!! TCATCCATTTTTCCTCAAGC+AGG - chr4.2:44355409-44355428 None:intergenic 40.0%
!! TTGGTGTTGCTACCTTTCAA+AGG + chr4.2:44355764-44355783 MS.gene08874:CDS 40.0%
!! TTTGGCTTGGAAGGTTTGAA+GGG - chr4.2:44355201-44355220 None:intergenic 40.0%
!!! GTTTTGAAGCACTCAAGTGT+TGG + chr4.2:44355680-44355699 MS.gene08874:CDS 40.0%
!!! TTTTGGCTTGGAAGGTTTGA+AGG - chr4.2:44355202-44355221 None:intergenic 40.0%
ACTTGTTCCAGAGCCATCAA+TGG + chr4.2:44355382-44355401 MS.gene08874:CDS 45.0%
GAAGGTTTGAAGGGAAAGCT+TGG - chr4.2:44355192-44355211 None:intergenic 45.0%
GCTCAAGAGTTGCAAGGAAA+TGG + chr4.2:44355298-44355317 MS.gene08874:CDS 45.0%
GGCTGTGAAAACTGTTATGG+TGG + chr4.2:44355892-44355911 MS.gene08874:CDS 45.0%
GGGAAGAGACATCACTTATG+AGG + chr4.2:44355130-44355149 MS.gene08874:CDS 45.0%
GGGGAATTGTACATAGTGGT+TGG + chr4.2:44355642-44355661 MS.gene08874:CDS 45.0%
TGGACCTGCTTGAGGAAAAA+TGG + chr4.2:44355402-44355421 MS.gene08874:CDS 45.0%
! ATTGCTGATGATGTGAAGGC+TGG + chr4.2:44355812-44355831 MS.gene08874:CDS 45.0%
! GGAGCACAATATCACTGACT+TGG - chr4.2:44355453-44355472 None:intergenic 45.0%
! GGGTGTTATGTTTGTCATGC+TGG + chr4.2:44355701-44355720 MS.gene08874:CDS 45.0%
! TTGCTGATGATGTGAAGGCT+GGG + chr4.2:44355813-44355832 MS.gene08874:CDS 45.0%
!! GTGGAAGTTGATAAAGAGCC+AGG + chr4.2:44355911-44355930 MS.gene08874:CDS 45.0%
AGGCTGGGGTAGAGGTAAAT+AGG + chr4.2:44355828-44355847 MS.gene08874:CDS 50.0%
GGTTGCGCAGTTGAAGTCTT+TGG + chr4.2:44356015-44356034 MS.gene08874:CDS 50.0%
TCCTCAAGCAGGTCCATTGA+TGG - chr4.2:44355398-44355417 None:intergenic 50.0%
! TGCTGATGATGTGAAGGCTG+GGG + chr4.2:44355814-44355833 MS.gene08874:CDS 50.0%
GCCATCAATGGACCTGCTTG+AGG + chr4.2:44355394-44355413 MS.gene08874:CDS 55.0%
TGATGTGAAGGCTGGGGTAG+AGG + chr4.2:44355820-44355839 MS.gene08874:CDS 55.0%
! AGCAGGTCCATTGATGGCTC+TGG - chr4.2:44355392-44355411 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 44354915 44356042 44354915 ID=MS.gene08874
chr4.2 mRNA 44354915 44356042 44354915 ID=MS.gene08874.t1;Parent=MS.gene08874
chr4.2 exon 44354915 44356042 44354915 ID=MS.gene08874.t1.exon1;Parent=MS.gene08874.t1
chr4.2 CDS 44354915 44356042 44354915 ID=cds.MS.gene08874.t1;Parent=MS.gene08874.t1
Gene Sequence

>MS.gene08874

ATGTTTGGCACACTCATTCAAGCAATAGACTCAATGCAAGATCATGTAAAAACCATTTTGTTTGAACTTAAACCCAATTTCATTTTCTTTGACATTGCAACAAGTTGGATCCCAAAAATAGCTTCTGAACTTGGCATAAAATCTGTTTACTTCTCGGTCTACTCAGCCATTTCAGCATCTTACCTATGTTCATCTTCAAGACTTGATGATACTAAGGGAAGAGACATCACTTATGAGGATTTTAAAAATCCCCCACTTGGGTATTTTCCAAATTCCAAGCTTTCCCTTCAAACCTTCCAAGCCAAAAATATTTTCATAGCACTCTTCCAATCTTTTAACTTTCATAAAGTCATGCAAAACTTTAGTGAAAGCTCACTAATAGTGCTCAAGAGTTGCAAGGAAATGGAAGGTCCTTATCTAGATTATTTTCAAAACCAATTTGAAAAACCAGTTCTTTTTTCTGGAGTACTTGTTCCAGAGCCATCAATGGACCTGCTTGAGGAAAAATGGATGAAATGGTTAGATGATTTCCCAACCAAGTCAGTGATATTGTGCTCCTTTGGTAGTGAAACATTTCTAAGTGATGATCAAATCAATGAACTAGCAATTGGGTTGGAACTTACAAATTTACCCTTCATTTTAGTCTTAAATTTTCCATCAAATCTCAATGCTAAATCTGAGTTAGAAAGAGCATTACCGAAAGGGTTCTTAGAAAGAGTGAAGAATAGGGGAATTGTACATAGTGGTTGGTTGCAACAGCAACTTGTTTTGAAGCACTCAAGTGTTGGGTGTTATGTTTGTCATGCTGGTTTTAGTTCTCTGATAGAAGCTATAGTTAATGATTGTCAGTTGGTGTTGCTACCTTTCAAAGGTGATCAGTTTTTAAATTCTAAACTCATTGCTGATGATGTGAAGGCTGGGGTAGAGGTAAATAGGAAAGATGAAGATGGATTTTTTCAGAAAGAGGAATTGTTAGAGGCTGTGAAAACTGTTATGGTGGAAGTTGATAAAGAGCCAGGAAGACGGATAAGAGAAAATCATATGAAATTGAGGGAGTTTTTATTGGATAAGGAAATTCAGAACAAATTCATCACAGATCTGGTTGCGCAGTTGAAGTCTTTGGCTTAG
Protein sequence

>MS.gene08874.t1

MFGTLIQAIDSMQDHVKTILFELKPNFIFFDIATSWIPKIASELGIKSVYFSVYSAISASYLCSSSRLDDTKGRDITYEDFKNPPLGYFPNSKLSLQTFQAKNIFIALFQSFNFHKVMQNFSESSLIVLKSCKEMEGPYLDYFQNQFEKPVLFSGVLVPEPSMDLLEEKWMKWLDDFPTKSVILCSFGSETFLSDDQINELAIGLELTNLPFILVLNFPSNLNAKSELERALPKGFLERVKNRGIVHSGWLQQQLVLKHSSVGCYVCHAGFSSLIEAIVNDCQLVLLPFKGDQFLNSKLIADDVKAGVEVNRKDEDGFFQKEELLEAVKTVMVEVDKEPGRRIRENHMKLREFLLDKEIQNKFITDLVAQLKSLA