Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09047.t1 | XP_013446527.1 | 97.8 | 591 | 13 | 0 | 1 | 591 | 295 | 885 | 0.00E+00 | 1126.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09047.t1 | Q0WVW7 | 62.8 | 592 | 219 | 1 | 1 | 591 | 288 | 879 | 1.2e-210 | 734.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09047.t1 | A0A072TSR0 | 97.8 | 591 | 13 | 0 | 1 | 591 | 295 | 885 | 0.0e+00 | 1126.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049397 | MS.gene09047 | 0.810431 | 1.16E-50 | -1.69E-46 |
MS.gene049989 | MS.gene09047 | 0.820201 | 7.77E-53 | -1.69E-46 |
MS.gene050297 | MS.gene09047 | 0.808337 | 3.25E-50 | -1.69E-46 |
MS.gene050648 | MS.gene09047 | 0.800751 | 1.24E-48 | -1.69E-46 |
MS.gene059300 | MS.gene09047 | 0.801009 | 1.10E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09047.t1 | MTR_8g080160 | 97.800 | 591 | 13 | 0 | 1 | 591 | 295 | 885 | 0.0 | 1199 |
MS.gene09047.t1 | MTR_1g083840 | 37.695 | 321 | 182 | 9 | 2 | 310 | 221 | 535 | 9.54e-57 | 201 |
MS.gene09047.t1 | MTR_2g006440 | 36.585 | 328 | 196 | 6 | 2 | 321 | 428 | 751 | 1.36e-56 | 206 |
MS.gene09047.t1 | MTR_2g042440 | 38.957 | 326 | 175 | 9 | 3 | 312 | 63 | 380 | 1.21e-51 | 189 |
MS.gene09047.t1 | MTR_2g042440 | 38.957 | 326 | 175 | 9 | 3 | 312 | 63 | 380 | 1.22e-51 | 189 |
MS.gene09047.t1 | MTR_5g026590 | 35.048 | 311 | 175 | 8 | 1 | 302 | 108 | 400 | 2.68e-46 | 173 |
MS.gene09047.t1 | MTR_3g063040 | 36.538 | 312 | 177 | 9 | 1 | 302 | 35 | 335 | 3.06e-46 | 175 |
MS.gene09047.t1 | MTR_1g083250 | 36.306 | 157 | 96 | 3 | 148 | 302 | 456 | 610 | 9.61e-22 | 99.8 |
MS.gene09047.t1 | MTR_1g083250 | 32.258 | 186 | 109 | 6 | 1 | 174 | 183 | 363 | 1.07e-21 | 99.8 |
MS.gene09047.t1 | MTR_1g083250 | 32.258 | 186 | 109 | 6 | 1 | 174 | 183 | 363 | 1.64e-21 | 99.4 |
MS.gene09047.t1 | MTR_1g083250 | 30.522 | 249 | 147 | 8 | 148 | 374 | 456 | 700 | 2.05e-21 | 99.4 |
MS.gene09047.t1 | MTR_1g083250 | 32.258 | 186 | 109 | 6 | 1 | 174 | 183 | 363 | 1.81e-21 | 99.8 |
MS.gene09047.t1 | MTR_1g083250 | 30.522 | 249 | 147 | 8 | 148 | 374 | 456 | 700 | 2.64e-21 | 99.0 |
MS.gene09047.t1 | MTR_2g100230 | 26.266 | 316 | 208 | 10 | 3 | 302 | 138 | 444 | 1.83e-14 | 76.6 |
MS.gene09047.t1 | MTR_5g027840 | 23.926 | 326 | 209 | 9 | 3 | 302 | 144 | 456 | 4.44e-14 | 75.5 |
MS.gene09047.t1 | MTR_3g467550 | 25.602 | 332 | 204 | 11 | 6 | 308 | 162 | 479 | 5.54e-13 | 72.0 |
MS.gene09047.t1 | MTR_3g467550 | 25.602 | 332 | 204 | 11 | 6 | 308 | 131 | 448 | 5.58e-13 | 72.0 |
MS.gene09047.t1 | MTR_2g438110 | 30.159 | 126 | 86 | 1 | 202 | 325 | 276 | 401 | 7.46e-13 | 71.2 |
MS.gene09047.t1 | MTR_1g095810 | 33.051 | 118 | 74 | 1 | 186 | 303 | 388 | 500 | 9.70e-13 | 71.2 |
MS.gene09047.t1 | MTR_4g134170 | 30.252 | 119 | 80 | 1 | 199 | 314 | 550 | 668 | 4.13e-12 | 69.7 |
MS.gene09047.t1 | MTR_4g105100 | 33.333 | 102 | 68 | 0 | 201 | 302 | 449 | 550 | 1.46e-11 | 67.8 |
MS.gene09047.t1 | MTR_1g026830 | 31.356 | 118 | 76 | 1 | 186 | 303 | 390 | 502 | 2.52e-11 | 67.0 |
MS.gene09047.t1 | MTR_6g005550 | 33.333 | 105 | 69 | 1 | 201 | 305 | 412 | 515 | 2.70e-11 | 67.0 |
MS.gene09047.t1 | MTR_2g032630 | 32.710 | 107 | 71 | 1 | 201 | 307 | 743 | 848 | 2.71e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09047.t1 | AT1G27880 | 62.838 | 592 | 219 | 1 | 1 | 591 | 288 | 879 | 0.0 | 757 |
MS.gene09047.t1 | AT1G27880 | 62.366 | 558 | 209 | 1 | 1 | 557 | 288 | 845 | 0.0 | 693 |
MS.gene09047.t1 | AT3G05740 | 36.050 | 319 | 190 | 8 | 2 | 310 | 141 | 455 | 3.50e-56 | 198 |
MS.gene09047.t1 | AT1G10930 | 37.082 | 329 | 193 | 7 | 2 | 321 | 473 | 796 | 7.18e-56 | 204 |
MS.gene09047.t1 | AT3G05740 | 36.977 | 311 | 182 | 8 | 2 | 302 | 226 | 532 | 2.16e-55 | 197 |
MS.gene09047.t1 | AT1G31360 | 38.978 | 313 | 177 | 8 | 1 | 302 | 108 | 417 | 8.18e-55 | 194 |
MS.gene09047.t1 | AT1G31360 | 38.978 | 313 | 177 | 8 | 1 | 302 | 108 | 417 | 8.18e-55 | 194 |
MS.gene09047.t1 | AT1G31360 | 38.978 | 313 | 177 | 8 | 1 | 302 | 108 | 417 | 1.69e-54 | 194 |
MS.gene09047.t1 | AT1G31360 | 38.978 | 313 | 177 | 8 | 1 | 302 | 108 | 417 | 1.76e-54 | 194 |
MS.gene09047.t1 | AT4G35740 | 35.602 | 382 | 203 | 12 | 3 | 349 | 57 | 430 | 5.26e-54 | 196 |
MS.gene09047.t1 | AT1G31360 | 38.978 | 313 | 177 | 8 | 1 | 302 | 108 | 417 | 8.80e-54 | 194 |
MS.gene09047.t1 | AT1G31360 | 38.854 | 314 | 176 | 9 | 1 | 302 | 108 | 417 | 1.73e-53 | 194 |
MS.gene09047.t1 | AT1G31360 | 38.854 | 314 | 176 | 9 | 1 | 302 | 142 | 451 | 2.21e-53 | 194 |
MS.gene09047.t1 | AT1G31360 | 37.500 | 296 | 169 | 9 | 19 | 302 | 1 | 292 | 2.16e-45 | 169 |
MS.gene09047.t1 | AT4G35740 | 32.840 | 338 | 185 | 11 | 46 | 349 | 8 | 337 | 1.13e-37 | 148 |
MS.gene09047.t1 | AT5G27680 | 34.737 | 190 | 102 | 5 | 202 | 370 | 371 | 559 | 6.25e-21 | 97.8 |
MS.gene09047.t1 | AT5G27680 | 32.812 | 192 | 102 | 8 | 1 | 175 | 57 | 238 | 6.89e-21 | 97.4 |
MS.gene09047.t1 | AT5G27680 | 32.812 | 192 | 102 | 8 | 1 | 175 | 187 | 368 | 8.21e-21 | 97.4 |
MS.gene09047.t1 | AT5G27680 | 34.737 | 190 | 102 | 5 | 202 | 370 | 501 | 689 | 8.65e-21 | 97.4 |
MS.gene09047.t1 | AT5G27680 | 32.812 | 192 | 102 | 8 | 1 | 175 | 187 | 368 | 8.21e-21 | 97.4 |
MS.gene09047.t1 | AT5G27680 | 34.737 | 190 | 102 | 5 | 202 | 370 | 501 | 689 | 8.65e-21 | 97.4 |
MS.gene09047.t1 | AT5G27680 | 32.812 | 192 | 102 | 8 | 1 | 175 | 187 | 368 | 8.21e-21 | 97.4 |
MS.gene09047.t1 | AT5G27680 | 34.737 | 190 | 102 | 5 | 202 | 370 | 501 | 689 | 8.65e-21 | 97.4 |
MS.gene09047.t1 | AT5G27680 | 32.812 | 192 | 102 | 8 | 1 | 175 | 187 | 368 | 8.21e-21 | 97.4 |
MS.gene09047.t1 | AT5G27680 | 34.737 | 190 | 102 | 5 | 202 | 370 | 501 | 689 | 8.65e-21 | 97.4 |
MS.gene09047.t1 | AT5G27680 | 32.812 | 192 | 102 | 8 | 1 | 175 | 187 | 368 | 8.51e-21 | 97.4 |
MS.gene09047.t1 | AT4G33370 | 33.913 | 115 | 71 | 1 | 189 | 303 | 344 | 453 | 2.85e-14 | 76.3 |
MS.gene09047.t1 | AT3G01540 | 25.943 | 212 | 147 | 5 | 97 | 305 | 305 | 509 | 8.56e-14 | 74.7 |
MS.gene09047.t1 | AT3G01540 | 25.943 | 212 | 147 | 5 | 97 | 305 | 305 | 509 | 9.35e-14 | 74.7 |
MS.gene09047.t1 | AT3G01540 | 25.943 | 212 | 147 | 5 | 97 | 305 | 305 | 509 | 9.35e-14 | 74.7 |
MS.gene09047.t1 | AT3G01540 | 25.943 | 212 | 147 | 5 | 97 | 305 | 305 | 509 | 9.35e-14 | 74.7 |
MS.gene09047.t1 | AT1G55150 | 27.103 | 321 | 199 | 11 | 3 | 302 | 167 | 473 | 1.25e-13 | 73.9 |
MS.gene09047.t1 | AT1G55150 | 40.196 | 102 | 61 | 0 | 201 | 302 | 347 | 448 | 1.34e-13 | 73.9 |
MS.gene09047.t1 | AT5G63120 | 23.676 | 321 | 210 | 10 | 3 | 302 | 208 | 514 | 5.12e-13 | 72.4 |
MS.gene09047.t1 | AT1G31970 | 24.847 | 326 | 207 | 10 | 3 | 302 | 157 | 470 | 7.26e-13 | 71.6 |
MS.gene09047.t1 | AT3G19760 | 31.746 | 126 | 84 | 1 | 202 | 325 | 278 | 403 | 8.71e-13 | 70.9 |
MS.gene09047.t1 | AT5G51280 | 33.043 | 115 | 72 | 1 | 189 | 303 | 393 | 502 | 1.02e-12 | 71.2 |
MS.gene09047.t1 | AT5G14610 | 25.822 | 213 | 146 | 6 | 97 | 305 | 177 | 381 | 1.52e-12 | 70.5 |
MS.gene09047.t1 | AT5G14610 | 25.822 | 213 | 146 | 6 | 97 | 305 | 177 | 381 | 1.52e-12 | 70.5 |
MS.gene09047.t1 | AT5G14610 | 25.352 | 213 | 147 | 5 | 97 | 305 | 376 | 580 | 3.44e-12 | 70.1 |
MS.gene09047.t1 | AT5G14610 | 25.352 | 213 | 147 | 5 | 97 | 305 | 316 | 520 | 3.89e-12 | 69.7 |
MS.gene09047.t1 | AT5G14610 | 25.352 | 213 | 147 | 5 | 97 | 305 | 308 | 512 | 4.63e-12 | 69.3 |
MS.gene09047.t1 | AT5G14610 | 25.352 | 213 | 147 | 5 | 97 | 305 | 308 | 512 | 5.05e-12 | 69.3 |
MS.gene09047.t1 | AT2G33730 | 31.092 | 119 | 79 | 1 | 199 | 314 | 577 | 695 | 7.83e-12 | 68.9 |
MS.gene09047.t1 | AT1G28180 | 28.767 | 146 | 92 | 4 | 199 | 333 | 218 | 362 | 3.70e-11 | 65.5 |
Find 107 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATTGCCTCCGCTCATTTC+GGG | 0.221496 | 4.3:-16638262 | MS.gene09047:CDS |
ATGCTTGCAAAGGATAATAT+TGG | 0.238086 | 4.3:-16632710 | MS.gene09047:CDS |
CAGCCTACCCTTATACAATA+TGG | 0.255516 | 4.3:-16632180 | MS.gene09047:CDS |
CAGCAATAGCAGAAACCTTT+TGG | 0.258260 | 4.3:+16634792 | None:intergenic |
ACATCTCATCATCATAAAAT+AGG | 0.269389 | 4.3:+16635995 | None:intergenic |
CATAGTATACTGCAAATTTC+AGG | 0.277071 | 4.3:-16637277 | MS.gene09047:intron |
ATAATATTGGATTACTTTGC+TGG | 0.294888 | 4.3:-16632697 | MS.gene09047:CDS |
ACAATTGCCTCCGCTCATTT+CGG | 0.302918 | 4.3:-16638263 | MS.gene09047:CDS |
TCGACTAATCCAAACCTTTA+GGG | 0.310744 | 4.3:+16634379 | None:intergenic |
TATGGGGTAAAACCCATTTC+TGG | 0.313223 | 4.3:-16632162 | None:intergenic |
AACTGATTTGTTAATTCAAC+TGG | 0.319696 | 4.3:+16634407 | None:intergenic |
GGCCTACTGTTATAGGATTC+TGG | 0.324072 | 4.3:-16633309 | MS.gene09047:CDS |
AGGACATGGCCTACTGTTAT+AGG | 0.330949 | 4.3:-16633316 | MS.gene09047:CDS |
TTATTCTAAATGCGCACTTA+AGG | 0.353628 | 4.3:-16637485 | MS.gene09047:CDS |
GGCTGTGTCCCTTGCCCAAA+AGG | 0.373276 | 4.3:-16634807 | MS.gene09047:CDS |
ACATACTCTTCCAGACTTCC+AGG | 0.383363 | 4.3:+16636152 | None:intergenic |
TATTCTAAATGCGCACTTAA+GGG | 0.388305 | 4.3:-16637484 | MS.gene09047:CDS |
TTACAGTTTACCTGGAAGTC+TGG | 0.398808 | 4.3:-16636162 | MS.gene09047:CDS |
TACGCTTGTTGTTAGTCCTT+TGG | 0.400050 | 4.3:-16638311 | MS.gene09047:CDS |
AATATCCAGGGCAGACATAA+TGG | 0.413104 | 4.3:+16637521 | None:intergenic |
AAATCAGTTGTATGCCCTAA+AGG | 0.419124 | 4.3:-16634393 | MS.gene09047:intron |
GTTGTTGCAACTGTGGCATT+TGG | 0.419325 | 4.3:-16636638 | MS.gene09047:CDS |
TTCTGTCTGTTATCTCTGGT+GGG | 0.425312 | 4.3:-16637827 | MS.gene09047:CDS |
GAATTTCTGTCTGTTATCTC+TGG | 0.426044 | 4.3:-16637831 | MS.gene09047:CDS |
AGCCTACCCTTATACAATAT+GGG | 0.426403 | 4.3:-16632179 | MS.gene09047:CDS |
TTTCCTGCGGGCAGATATAA+AGG | 0.426465 | 4.3:-16632382 | MS.gene09047:intron |
GCTTCGTCAAGGCACAATAA+AGG | 0.426914 | 4.3:-16638098 | MS.gene09047:intron |
AGATATTACACGATGGTTAT+CGG | 0.435170 | 4.3:-16633255 | MS.gene09047:CDS |
TTTCTGTCTGTTATCTCTGG+TGG | 0.437888 | 4.3:-16637828 | MS.gene09047:CDS |
CCCATGTCATTTGCCACAGT+TGG | 0.444192 | 4.3:+16634437 | None:intergenic |
ATCGGAAGTTGAAAGTTGTA+AGG | 0.447577 | 4.3:-16633237 | MS.gene09047:intron |
CATATTGTATAAGGGTAGGC+TGG | 0.448678 | 4.3:+16632181 | None:intergenic |
ATCATAAAATAGGTGACAAT+AGG | 0.453000 | 4.3:+16636005 | None:intergenic |
GGACAACCTCCCATCCCTTC+CGG | 0.453112 | 4.3:+16636026 | None:intergenic |
GGACTAGATAAAAGAGATGT+TGG | 0.458565 | 4.3:-16636611 | MS.gene09047:CDS |
GGCTACGTACAGGAGTTGTT+TGG | 0.463664 | 4.3:-16636803 | MS.gene09047:CDS |
ATAGGACGTGCCGGAAGGGA+TGG | 0.469051 | 4.3:-16636036 | MS.gene09047:CDS |
TGCAACTGTGGCATTTGGCA+TGG | 0.471083 | 4.3:-16636633 | MS.gene09047:CDS |
CGCTCTTCTAAGCAGTGCTC+AGG | 0.478699 | 4.3:-16638239 | MS.gene09047:intron |
AGAAATAACTTATGAAATGA+AGG | 0.481059 | 4.3:-16633336 | MS.gene09047:CDS |
ATTACCCTCGCAACAGCTCT+TGG | 0.487754 | 4.3:+16632220 | None:intergenic |
TCTTCATTCAAGAATCGCTC+TGG | 0.488566 | 4.3:+16637852 | None:intergenic |
ATATCAAACCTGCGTGAAGC+AGG | 0.492622 | 4.3:+16635760 | None:intergenic |
GAATGGGCATTGTAGGAGAT+AGG | 0.495642 | 4.3:-16636054 | MS.gene09047:intron |
TAGGACGTGCCGGAAGGGAT+GGG | 0.496615 | 4.3:-16636035 | MS.gene09047:CDS |
GCAACTGTGGCATTTGGCAT+GGG | 0.498488 | 4.3:-16636632 | MS.gene09047:CDS |
AGATGCCATTATGTCTGCCC+TGG | 0.503557 | 4.3:-16637526 | MS.gene09047:CDS |
TTATAGAATGAAAGACCTAC+TGG | 0.506852 | 4.3:-16637340 | MS.gene09047:intron |
TCCAACTGTGGCAAATGACA+TGG | 0.515681 | 4.3:-16634438 | MS.gene09047:CDS |
GCAAGAAAATTGATCAAAGC+AGG | 0.527941 | 4.3:-16632654 | MS.gene09047:intron |
CTATTGCTGTGATTCTGAAA+AGG | 0.538068 | 4.3:-16634778 | MS.gene09047:intron |
CCTGCTGACAAAAGCTCCTG+TGG | 0.542681 | 4.3:-16635808 | MS.gene09047:CDS |
TCATAGTGGTATTTCTGCAA+AGG | 0.548833 | 4.3:-16636831 | MS.gene09047:CDS |
CTTCATAAGAGTCTTAATGT+AGG | 0.549838 | 4.3:-16637591 | MS.gene09047:CDS |
GATTTGTGCAAGGAATATCC+AGG | 0.550259 | 4.3:+16637508 | None:intergenic |
TTATTGTGCCTTGACGAAGC+TGG | 0.551129 | 4.3:+16638101 | None:intergenic |
GTAATTCATTACAGTTTACC+TGG | 0.551307 | 4.3:-16636170 | MS.gene09047:CDS |
AAAGGAACGTGGCTACGTAC+AGG | 0.554701 | 4.3:-16636813 | MS.gene09047:CDS |
AACTTCGTAGTCTAATGTAC+AGG | 0.555989 | 4.3:-16635966 | MS.gene09047:intron |
ATATTGTATAAGGGTAGGCT+GGG | 0.562876 | 4.3:+16632182 | None:intergenic |
ATCATTTAGAGTTATCATAG+TGG | 0.565678 | 4.3:-16636845 | MS.gene09047:intron |
CATATGCAGTCGTTTCCTGC+GGG | 0.566507 | 4.3:-16632394 | MS.gene09047:intron |
TTTGAATGATAACAACATCA+AGG | 0.569180 | 4.3:-16636960 | MS.gene09047:CDS |
GCTCTGAGTCTCATGAATGA+AGG | 0.573682 | 4.3:+16637621 | None:intergenic |
ATCAATAACAACAAGTGAGA+CGG | 0.574473 | 4.3:+16637800 | None:intergenic |
ACCCCATATTGTATAAGGGT+AGG | 0.574497 | 4.3:+16632177 | None:intergenic |
TTCAGATCTGAAAATAAGCA+CGG | 0.583131 | 4.3:-16634479 | MS.gene09047:intron |
CATAATGGCATCTAAAGTCA+TGG | 0.585243 | 4.3:+16637536 | None:intergenic |
GGAGATAGGACGTGCCGGAA+GGG | 0.586499 | 4.3:-16636040 | MS.gene09047:CDS |
AAGCTGGTTGAGTGTTTCAG+AGG | 0.587339 | 4.3:+16638117 | None:intergenic |
AAGTCTGGAAGAGTATGTAC+AGG | 0.589387 | 4.3:-16636147 | MS.gene09047:intron |
CCAACTGTGGCAAATGACAT+GGG | 0.590683 | 4.3:-16634437 | MS.gene09047:CDS |
CTGCTGACAAAAGCTCCTGT+GGG | 0.597436 | 4.3:-16635807 | MS.gene09047:CDS |
ATCACACTTCATGCTTGCAA+AGG | 0.600346 | 4.3:-16632720 | MS.gene09047:CDS |
AAGCACATTGTATATCTGAA+TGG | 0.600670 | 4.3:-16637776 | MS.gene09047:intron |
TGATAACAACATCAAGGCAA+AGG | 0.601528 | 4.3:-16636954 | MS.gene09047:intron |
TTGTAGGAGATAGGACGTGC+CGG | 0.602571 | 4.3:-16636045 | MS.gene09047:intron |
AGGAGATAGGACGTGCCGGA+AGG | 0.602725 | 4.3:-16636041 | MS.gene09047:CDS |
GACGTGCCGGAAGGGATGGG+AGG | 0.603769 | 4.3:-16636032 | MS.gene09047:CDS |
TTACACCAAGAGCTGTTGCG+AGG | 0.607759 | 4.3:-16632225 | MS.gene09047:CDS |
TTTAGAATAAGATTTGTGCA+AGG | 0.610553 | 4.3:+16637498 | None:intergenic |
TATGAAGGTTGTTGCAACTG+TGG | 0.610759 | 4.3:-16636645 | MS.gene09047:intron |
TACACCAAGAGCTGTTGCGA+GGG | 0.610987 | 4.3:-16632224 | MS.gene09047:CDS |
AATCTATGTGATAAGATGAA+CGG | 0.611074 | 4.3:-16632757 | MS.gene09047:CDS |
GCCTACCCTTATACAATATG+GGG | 0.613022 | 4.3:-16632178 | MS.gene09047:CDS |
TGAGTCTCATGAATGAAGGT+CGG | 0.613163 | 4.3:+16637625 | None:intergenic |
TCAAAGAACCTGCTTCACGC+AGG | 0.615491 | 4.3:-16635768 | MS.gene09047:CDS |
CAGGTTTGATATGAAAGAAG+AGG | 0.626887 | 4.3:-16635749 | MS.gene09047:intron |
ACATATGCAGTCGTTTCCTG+CGG | 0.627745 | 4.3:-16632395 | MS.gene09047:intron |
CAACTGTGGCAAATGACATG+GGG | 0.630786 | 4.3:-16634436 | MS.gene09047:CDS |
TCACCTTTATATCTGCCCGC+AGG | 0.632718 | 4.3:+16632379 | None:intergenic |
TCAATCATCAAAGCTACCAA+AGG | 0.636069 | 4.3:+16638295 | None:intergenic |
ACACTCAACCAGCTTCGTCA+AGG | 0.636248 | 4.3:-16638109 | MS.gene09047:CDS |
AGAAGAGCGCCCGAAATGAG+CGG | 0.636804 | 4.3:+16638253 | None:intergenic |
GGTATTTCTGCAAAGGAACG+TGG | 0.641724 | 4.3:-16636824 | MS.gene09047:CDS |
AACTTATGAAATGAAGGACA+TGG | 0.644073 | 4.3:-16633330 | MS.gene09047:CDS |
ACACACGTTGCATTTGTCTG+TGG | 0.649253 | 4.3:+16635081 | None:intergenic |
TTCCAGAATCCTATAACAGT+AGG | 0.656135 | 4.3:+16633307 | None:intergenic |
AAGACTTCATAAGCACCAGT+AGG | 0.660081 | 4.3:+16637325 | None:intergenic |
CTAACAACAAGCGTAATCCC+AGG | 0.664152 | 4.3:+16638319 | None:intergenic |
AACGACTTCCCAGCACCCGT+CGG | 0.674866 | 4.3:+16638370 | None:intergenic |
ATTTGTGCAAGGAATATCCA+GGG | 0.675764 | 4.3:+16637509 | None:intergenic |
AGAGCGCCCGAAATGAGCGG+AGG | 0.689601 | 4.3:+16638256 | None:intergenic |
GCTGTTGCGAGGGTAATGCA+CGG | 0.692274 | 4.3:-16632214 | MS.gene09047:CDS |
AACTGTGGCAAATGACATGG+GGG | 0.692492 | 4.3:-16634435 | MS.gene09047:CDS |
TGGTTCAAACAAGATCAGAG+TGG | 0.733769 | 4.3:-16636783 | MS.gene09047:intron |
TATCAGCAGATATTACACGA+TGG | 0.752851 | 4.3:-16633262 | MS.gene09047:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCTATATTTATATATATGT+GGG | - | chr4.3:16633502-16633521 | MS.gene09047:intron | 10.0% |
!! | TAAACATATATTAAATTTCT+TGG | - | chr4.3:16635796-16635815 | MS.gene09047:CDS | 10.0% |
!! | TATCTATATTTATATATATG+TGG | - | chr4.3:16633501-16633520 | MS.gene09047:intron | 10.0% |
!!! | AGTTTAATTTGAAAATTTTA+AGG | + | chr4.3:16636436-16636455 | None:intergenic | 10.0% |
!!! | ATATGATCTTAAATTTTTTT+GGG | - | chr4.3:16637991-16638010 | MS.gene09047:intron | 10.0% |
!!! | GTTTAATTTGAAAATTTTAA+GGG | + | chr4.3:16636435-16636454 | None:intergenic | 10.0% |
!!! | TATATGATCTTAAATTTTTT+TGG | - | chr4.3:16637990-16638009 | MS.gene09047:intron | 10.0% |
!!! | TTTTTCTTATTAAATAGAAT+GGG | - | chr4.3:16634475-16634494 | MS.gene09047:CDS | 10.0% |
!! | ATTGTAGTATTTATATTTAG+AGG | - | chr4.3:16637342-16637361 | MS.gene09047:intron | 15.0% |
!! | TTAAACCATAGTATAATTTA+CGG | - | chr4.3:16635583-16635602 | MS.gene09047:intron | 15.0% |
!!! | AAATTTTAAATTGCAAAATG+GGG | - | chr4.3:16634186-16634205 | MS.gene09047:intron | 15.0% |
!!! | ACAAATTTTAAATTGCAAAA+TGG | - | chr4.3:16634184-16634203 | MS.gene09047:intron | 15.0% |
!!! | ATTTTTCAATTTTAAGGTAT+TGG | - | chr4.3:16633307-16633326 | MS.gene09047:CDS | 15.0% |
!!! | CAAATTTTAAATTGCAAAAT+GGG | - | chr4.3:16634185-16634204 | MS.gene09047:intron | 15.0% |
!!! | GTTTTTCTTATTAAATAGAA+TGG | - | chr4.3:16634474-16634493 | MS.gene09047:CDS | 15.0% |
!!! | TGATAGAGTTTTATTTTTTA+TGG | - | chr4.3:16635216-16635235 | MS.gene09047:intron | 15.0% |
!!! | TGGCTTATATTTTTAATTTT+TGG | - | chr4.3:16635699-16635718 | MS.gene09047:intron | 15.0% |
!!! | TTATATTTTGAAATTCTTAC+AGG | - | chr4.3:16632886-16632905 | MS.gene09047:intron | 15.0% |
!!! | TTTTTCAATTTTAAGGTATT+GGG | - | chr4.3:16633308-16633327 | MS.gene09047:CDS | 15.0% |
!! | AAAAATTAACAAACACAAGA+TGG | + | chr4.3:16635635-16635654 | None:intergenic | 20.0% |
!! | AAAATTAACAAACACAAGAT+GGG | + | chr4.3:16635634-16635653 | None:intergenic | 20.0% |
!! | AGAAATAACTTATGAAATGA+AGG | - | chr4.3:16637209-16637228 | MS.gene09047:intron | 20.0% |
!! | AGATTGAAAAGTAGTTATTA+TGG | - | chr4.3:16637593-16637612 | MS.gene09047:CDS | 20.0% |
!! | ATTGCAATTATAATTCTTAC+AGG | - | chr4.3:16632656-16632675 | MS.gene09047:CDS | 20.0% |
!! | CAATTACAAATTCCTAAAAA+TGG | + | chr4.3:16635078-16635097 | None:intergenic | 20.0% |
!! | GTGCATATTTATTTCATAAA+TGG | + | chr4.3:16635275-16635294 | None:intergenic | 20.0% |
!! | GTTATTAAATTATGTGTTTC+AGG | - | chr4.3:16633424-16633443 | MS.gene09047:intron | 20.0% |
!! | TCAAAATATAAAGATCAACA+CGG | + | chr4.3:16632877-16632896 | None:intergenic | 20.0% |
!! | TGTATATTAGAATTGAGTAA+AGG | + | chr4.3:16634823-16634842 | None:intergenic | 20.0% |
!!! | AAATTTTCTGTTTCTACAAA+GGG | - | chr4.3:16635909-16635928 | MS.gene09047:intron | 20.0% |
!!! | AATTTTAAATTGCAAAATGG+GGG | - | chr4.3:16634187-16634206 | MS.gene09047:intron | 20.0% |
!!! | AGAATTTTTCACAAATAACA+AGG | + | chr4.3:16637178-16637197 | None:intergenic | 20.0% |
!!! | ATTATTTCTGTGAGTTAATA+AGG | - | chr4.3:16632825-16632844 | MS.gene09047:intron | 20.0% |
!!! | CACTTACAATAATAATTTTG+GGG | + | chr4.3:16638054-16638073 | None:intergenic | 20.0% |
!!! | GACTTCATTTTTCAATTTTA+AGG | - | chr4.3:16633301-16633320 | MS.gene09047:CDS | 20.0% |
!!! | GATTTTATTTCAAATACTGT+AGG | + | chr4.3:16633387-16633406 | None:intergenic | 20.0% |
!!! | GCACTTACAATAATAATTTT+GGG | + | chr4.3:16638055-16638074 | None:intergenic | 20.0% |
!!! | TGAGAATGTTGATTATTTAT+AGG | - | chr4.3:16632555-16632574 | MS.gene09047:intron | 20.0% |
!!! | TGCACTTACAATAATAATTT+TGG | + | chr4.3:16638056-16638075 | None:intergenic | 20.0% |
!!! | TTCTCAAAAGATTTTACTTA+TGG | - | chr4.3:16634159-16634178 | MS.gene09047:intron | 20.0% |
!!! | TTTTTTTGGGTATTGAAAAT+TGG | - | chr4.3:16638004-16638023 | MS.gene09047:intron | 20.0% |
! | AAATTTATGATAACCATCTC+AGG | - | chr4.3:16634969-16634988 | MS.gene09047:intron | 25.0% |
! | AACCTACTTATATGATGATA+AGG | - | chr4.3:16638075-16638094 | MS.gene09047:intron | 25.0% |
! | AACCTTCATAAAAAATTGCA+AGG | + | chr4.3:16633890-16633909 | None:intergenic | 25.0% |
! | AATCTATGTGATAAGATGAA+CGG | - | chr4.3:16637788-16637807 | MS.gene09047:CDS | 25.0% |
! | ACATCTCATCATCATAAAAT+AGG | + | chr4.3:16634553-16634572 | None:intergenic | 25.0% |
! | ATAATATTGGATTACTTTGC+TGG | - | chr4.3:16637848-16637867 | MS.gene09047:CDS | 25.0% |
! | ATCATAAAATAGGTGACAAT+AGG | + | chr4.3:16634543-16634562 | None:intergenic | 25.0% |
! | ATCCTTATCATCATATAAGT+AGG | + | chr4.3:16638080-16638099 | None:intergenic | 25.0% |
! | CATTTCTCTTATATTTACTC+AGG | - | chr4.3:16637529-16637548 | MS.gene09047:CDS | 25.0% |
! | CTGAGTAAATATAAGAGAAA+TGG | + | chr4.3:16637531-16637550 | None:intergenic | 25.0% |
! | CTTTGTAGAAACAGAAAATT+TGG | + | chr4.3:16635910-16635929 | None:intergenic | 25.0% |
! | GTGAAAAATTCTCAGTTTAA+GGG | - | chr4.3:16637186-16637205 | MS.gene09047:intron | 25.0% |
! | TAACAAAACTTTCTCTTGTA+AGG | - | chr4.3:16635302-16635321 | MS.gene09047:intron | 25.0% |
! | TACGTTAAAAAACTCAGATA+AGG | + | chr4.3:16633177-16633196 | None:intergenic | 25.0% |
! | TCAAATGTGATATGTGAAAA+TGG | + | chr4.3:16632581-16632600 | None:intergenic | 25.0% |
! | TCAATCCGTAAATTATACTA+TGG | + | chr4.3:16635591-16635610 | None:intergenic | 25.0% |
! | TGTGAAAAATTCTCAGTTTA+AGG | - | chr4.3:16637185-16637204 | MS.gene09047:intron | 25.0% |
! | TTCATAAATGGATAAATGAC+TGG | + | chr4.3:16635263-16635282 | None:intergenic | 25.0% |
! | TTTCCTTGTCTTAAAATCTT+TGG | - | chr4.3:16636716-16636735 | MS.gene09047:intron | 25.0% |
! | TTTGAATGATAACAACATCA+AGG | - | chr4.3:16633585-16633604 | MS.gene09047:intron | 25.0% |
!! | ACTCAAAAGTCTAAAACATA+AGG | + | chr4.3:16634103-16634122 | None:intergenic | 25.0% |
!! | ATCATTTAGAGTTATCATAG+TGG | - | chr4.3:16633700-16633719 | MS.gene09047:intron | 25.0% |
!! | CACATTTTTGTACAAAAACA+AGG | + | chr4.3:16635103-16635122 | None:intergenic | 25.0% |
!! | TATGAACAGTTTTCCTTTTA+CGG | - | chr4.3:16637563-16637582 | MS.gene09047:CDS | 25.0% |
!! | TGTTATTTAGTACAGAACTT+AGG | + | chr4.3:16637936-16637955 | None:intergenic | 25.0% |
!! | TTGTACAAAAATGTGGTTTT+TGG | - | chr4.3:16635108-16635127 | MS.gene09047:CDS | 25.0% |
!! | TTTAGAATAAGATTTGTGCA+AGG | + | chr4.3:16633050-16633069 | None:intergenic | 25.0% |
!! | TTTTACCCCATATTGTATAA+GGG | + | chr4.3:16638375-16638394 | None:intergenic | 25.0% |
!!! | AACTGATTTGTTAATTCAAC+TGG | + | chr4.3:16636141-16636160 | None:intergenic | 25.0% |
!!! | CAAATTTTCTGTTTCTACAA+AGG | - | chr4.3:16635908-16635927 | MS.gene09047:intron | 25.0% |
!!! | CGTAAATCAGTATTTTTAAC+AGG | + | chr4.3:16636579-16636598 | None:intergenic | 25.0% |
!!! | CTATTTTGACTTTCTAGTTT+GGG | - | chr4.3:16637071-16637090 | MS.gene09047:intron | 25.0% |
!!! | CTTGTTTTTGTACAAAAATG+TGG | - | chr4.3:16635101-16635120 | MS.gene09047:CDS | 25.0% |
!!! | TACCTTGCAATTTTTTATGA+AGG | - | chr4.3:16633885-16633904 | MS.gene09047:intron | 25.0% |
!!! | TCTATTTTGACTTTCTAGTT+TGG | - | chr4.3:16637070-16637089 | MS.gene09047:intron | 25.0% |
!!! | TTTTGTGTGTTATTTTCTCA+TGG | - | chr4.3:16637703-16637722 | MS.gene09047:intron | 25.0% |
AAATATAAAGATCAACACGG+AGG | + | chr4.3:16632874-16632893 | None:intergenic | 30.0% | |
AACTTATGAAATGAAGGACA+TGG | - | chr4.3:16637215-16637234 | MS.gene09047:intron | 30.0% | |
AACTTGATGCATATCATGTT+TGG | - | chr4.3:16638222-16638241 | MS.gene09047:intron | 30.0% | |
AAGCACATTGTATATCTGAA+TGG | - | chr4.3:16632769-16632788 | MS.gene09047:CDS | 30.0% | |
AGATATTACACGATGGTTAT+CGG | - | chr4.3:16637290-16637309 | MS.gene09047:CDS | 30.0% | |
AGATTTAACATTCAGTGTCA+AGG | + | chr4.3:16633664-16633683 | None:intergenic | 30.0% | |
AGCATACAGTTTAGATAAGT+AGG | + | chr4.3:16635564-16635583 | None:intergenic | 30.0% | |
ATAGAGAAAAAAAGTCTGTC+GGG | + | chr4.3:16637266-16637285 | None:intergenic | 30.0% | |
ATCAATAACAACAAGTGAGA+CGG | + | chr4.3:16632748-16632767 | None:intergenic | 30.0% | |
ATGCTTGCAAAGGATAATAT+TGG | - | chr4.3:16637835-16637854 | MS.gene09047:CDS | 30.0% | |
ATTGTATATCTGAATGGTGA+GGG | - | chr4.3:16632775-16632794 | MS.gene09047:CDS | 30.0% | |
CAATCTTTGAATACCGTAAA+AGG | + | chr4.3:16637579-16637598 | None:intergenic | 30.0% | |
CATAGTATACTGCAAATTTC+AGG | - | chr4.3:16633268-16633287 | MS.gene09047:CDS | 30.0% | |
CTGCGTCTTTGATAAAAAAT+AGG | - | chr4.3:16633099-16633118 | MS.gene09047:intron | 30.0% | |
CTTAAAATCTTTGGCATCAT+AGG | - | chr4.3:16636725-16636744 | MS.gene09047:intron | 30.0% | |
CTTCATAAGAGTCTTAATGT+AGG | - | chr4.3:16632954-16632973 | MS.gene09047:intron | 30.0% | |
GAAACAGTATAATTGTGTTC+TGG | - | chr4.3:16637138-16637157 | MS.gene09047:intron | 30.0% | |
GATAGAGAAAAAAAGTCTGT+CGG | + | chr4.3:16637267-16637286 | None:intergenic | 30.0% | |
GATATTGTACATGCAATTGA+AGG | + | chr4.3:16635521-16635540 | None:intergenic | 30.0% | |
GATTTAACATTCAGTGTCAA+GGG | + | chr4.3:16633663-16633682 | None:intergenic | 30.0% | |
GTAAAAGGAAAACTGTTCAT+AGG | + | chr4.3:16637564-16637583 | None:intergenic | 30.0% | |
GTAATTCATTACAGTTTACC+TGG | - | chr4.3:16634375-16634394 | MS.gene09047:intron | 30.0% | |
TATTCTAAATGCGCACTTAA+GGG | - | chr4.3:16633061-16633080 | MS.gene09047:intron | 30.0% | |
TATTTGGTCTCAAGTTAATC+TGG | + | chr4.3:16635171-16635190 | None:intergenic | 30.0% | |
TCACCTAGTAAAGGAAATAT+TGG | + | chr4.3:16635388-16635407 | None:intergenic | 30.0% | |
TCTAACATTCACTCTCTTAT+TGG | - | chr4.3:16637393-16637412 | MS.gene09047:intron | 30.0% | |
TCTCCAATATTTCCTTTACT+AGG | - | chr4.3:16635382-16635401 | MS.gene09047:intron | 30.0% | |
TGATAGTAATTCAAACGACA+GGG | - | chr4.3:16636505-16636524 | MS.gene09047:intron | 30.0% | |
TTATAGAATGAAAGACCTAC+TGG | - | chr4.3:16633205-16633224 | MS.gene09047:intron | 30.0% | |
TTATTCTAAATGCGCACTTA+AGG | - | chr4.3:16633060-16633079 | MS.gene09047:intron | 30.0% | |
TTCAGATCTGAAAATAAGCA+CGG | - | chr4.3:16636066-16636085 | MS.gene09047:intron | 30.0% | |
TTCTCTCACACTTCATTATT+GGG | + | chr4.3:16636304-16636323 | None:intergenic | 30.0% | |
TTGTTTGAGAGATTATTCAG+TGG | - | chr4.3:16635679-16635698 | MS.gene09047:intron | 30.0% | |
TTTCTACAAAAGAAGATCCA+AGG | + | chr4.3:16632503-16632522 | None:intergenic | 30.0% | |
TTTCTCTCACACTTCATTAT+TGG | + | chr4.3:16636305-16636324 | None:intergenic | 30.0% | |
! | AAAAATTGCAAGGTATCAGT+TGG | + | chr4.3:16633880-16633899 | None:intergenic | 30.0% |
! | ATTTTTAACAGGAGTAGTGA+AGG | + | chr4.3:16636568-16636587 | None:intergenic | 30.0% |
! | GTTTTACCCCATATTGTATA+AGG | + | chr4.3:16638376-16638395 | None:intergenic | 30.0% |
! | TACTTTTGATATTCCAACTG+TGG | - | chr4.3:16636095-16636114 | MS.gene09047:intron | 30.0% |
! | TGAAAATTACCTGTTTCTCT+GGG | - | chr4.3:16638257-16638276 | MS.gene09047:CDS | 30.0% |
! | TTAAATAGAATGGGCATTGT+AGG | - | chr4.3:16634484-16634503 | MS.gene09047:intron | 30.0% |
! | TTGATAGTAATTCAAACGAC+AGG | - | chr4.3:16636504-16636523 | MS.gene09047:intron | 30.0% |
! | TTTTAATGTTGTCAACCTCA+AGG | - | chr4.3:16635873-16635892 | MS.gene09047:intron | 30.0% |
!! | TGGATAAAGCTATTGATTCA+TGG | - | chr4.3:16636461-16636480 | MS.gene09047:intron | 30.0% |
!!! | AATTTTAAGGTATTGGGTCT+CGG | - | chr4.3:16633314-16633333 | MS.gene09047:CDS | 30.0% |
!!! | ATAATTTTGGGGCATAAACT+AGG | + | chr4.3:16638043-16638062 | None:intergenic | 30.0% |
!!! | ATGCCAAAGATTTTAAGACA+AGG | + | chr4.3:16636722-16636741 | None:intergenic | 30.0% |
!!! | CTTGACTAAAAGCCATTTTT+AGG | - | chr4.3:16635063-16635082 | MS.gene09047:intron | 30.0% |
!!! | GCTATTTTAGTACAAGATCA+TGG | + | chr4.3:16638122-16638141 | None:intergenic | 30.0% |
!!! | TTTTTTCTCAAGCTTGTATG+TGG | - | chr4.3:16636199-16636218 | MS.gene09047:intron | 30.0% |
AAAAAATATCTCGCACTGCA+AGG | + | chr4.3:16637038-16637057 | None:intergenic | 35.0% | |
AAAATGGGGGTAAATGGTAT+TGG | - | chr4.3:16634200-16634219 | MS.gene09047:intron | 35.0% | |
AAATCAGTTGTATGCCCTAA+AGG | - | chr4.3:16636152-16636171 | MS.gene09047:CDS | 35.0% | |
AACTAGAGCCCAATTAGAAT+CGG | + | chr4.3:16634055-16634074 | None:intergenic | 35.0% | |
AACTTCGTAGTCTAATGTAC+AGG | - | chr4.3:16634579-16634598 | MS.gene09047:intron | 35.0% | |
AATGCAATGAATTATCCACC+CGG | + | chr4.3:16637684-16637703 | None:intergenic | 35.0% | |
AATTGCAAAATGGGGGTAAA+TGG | - | chr4.3:16634194-16634213 | MS.gene09047:intron | 35.0% | |
AATTGCTCTGTAGAAAAACC+TGG | + | chr4.3:16638288-16638307 | None:intergenic | 35.0% | |
ACAATAACCATCCATTTCAG+GGG | + | chr4.3:16635842-16635861 | None:intergenic | 35.0% | |
ACACAATAACCATCCATTTC+AGG | + | chr4.3:16635844-16635863 | None:intergenic | 35.0% | |
ACACACAAACACTACATACT+TGG | + | chr4.3:16636800-16636819 | None:intergenic | 35.0% | |
ACTCAGATAAGGATAGTTAG+AGG | + | chr4.3:16633166-16633185 | None:intergenic | 35.0% | |
ACTTTGATAAACCAGATGAG+TGG | - | chr4.3:16634863-16634882 | MS.gene09047:intron | 35.0% | |
AGACTTTCATAACATCCTGT+TGG | - | chr4.3:16634902-16634921 | MS.gene09047:intron | 35.0% | |
AGCCATAAATACTTGCAACA+TGG | - | chr4.3:16636649-16636668 | MS.gene09047:intron | 35.0% | |
AGCCATGTTGCAAGTATTTA+TGG | + | chr4.3:16636654-16636673 | None:intergenic | 35.0% | |
AGCCTACCCTTATACAATAT+GGG | - | chr4.3:16638366-16638385 | MS.gene09047:CDS | 35.0% | |
ATATTGTATAAGGGTAGGCT+GGG | + | chr4.3:16638366-16638385 | None:intergenic | 35.0% | |
ATCGACTAATCCAAACCTTT+AGG | + | chr4.3:16636170-16636189 | None:intergenic | 35.0% | |
ATCGGAAGTTGAAAGTTGTA+AGG | - | chr4.3:16637308-16637327 | MS.gene09047:CDS | 35.0% | |
ATGCATATCATGTTTGGAAG+AGG | - | chr4.3:16638228-16638247 | MS.gene09047:intron | 35.0% | |
ATGGACAACCATCTACTTAT+AGG | - | chr4.3:16635235-16635254 | MS.gene09047:intron | 35.0% | |
ATTCTAGTGTGATCACGATA+AGG | + | chr4.3:16635985-16636004 | None:intergenic | 35.0% | |
ATTGAGTTAGAACCTTGCAA+AGG | - | chr4.3:16636828-16636847 | MS.gene09047:CDS | 35.0% | |
ATTTGATGCAGGGTAACAAA+GGG | + | chr4.3:16636535-16636554 | None:intergenic | 35.0% | |
ATTTGTGCAAGGAATATCCA+GGG | + | chr4.3:16633039-16633058 | None:intergenic | 35.0% | |
CACAATAACCATCCATTTCA+GGG | + | chr4.3:16635843-16635862 | None:intergenic | 35.0% | |
CAGGTTTGATATGAAAGAAG+AGG | - | chr4.3:16634796-16634815 | MS.gene09047:CDS | 35.0% | |
CATTGTATATCTGAATGGTG+AGG | - | chr4.3:16632774-16632793 | MS.gene09047:CDS | 35.0% | |
CCATTGTCATAACTGTGTTT+AGG | - | chr4.3:16634353-16634372 | MS.gene09047:intron | 35.0% | |
CCTAAACACAGTTATGACAA+TGG | + | chr4.3:16634356-16634375 | None:intergenic | 35.0% | |
CTAATCAGAGATTTGATGCA+GGG | + | chr4.3:16636545-16636564 | None:intergenic | 35.0% | |
CTCAGATAAGGATAGTTAGA+GGG | + | chr4.3:16633165-16633184 | None:intergenic | 35.0% | |
CTCTGTTCATGCATAATGTT+CGG | - | chr4.3:16634245-16634264 | MS.gene09047:intron | 35.0% | |
CTTGAGACCAAATAAAGCTA+AGG | - | chr4.3:16635177-16635196 | MS.gene09047:intron | 35.0% | |
GAAATGGATCCCATATAAAG+TGG | - | chr4.3:16637446-16637465 | MS.gene09047:intron | 35.0% | |
GAATCTGCTAAACTATCTTC+AGG | + | chr4.3:16636370-16636389 | None:intergenic | 35.0% | |
GAATTTCTGTCTGTTATCTC+TGG | - | chr4.3:16632714-16632733 | MS.gene09047:CDS | 35.0% | |
GACTTTCATAACATCCTGTT+GGG | - | chr4.3:16634903-16634922 | MS.gene09047:intron | 35.0% | |
GATAGTAATTCAAACGACAG+GGG | - | chr4.3:16636506-16636525 | MS.gene09047:intron | 35.0% | |
GCAAGAAAATTGATCAAAGC+AGG | - | chr4.3:16637891-16637910 | MS.gene09047:intron | 35.0% | |
GGACTAGATAAAAGAGATGT+TGG | - | chr4.3:16633934-16633953 | MS.gene09047:intron | 35.0% | |
TATCAGCAGATATTACACGA+TGG | - | chr4.3:16637283-16637302 | MS.gene09047:CDS | 35.0% | |
TCAATCATCAAAGCTACCAA+AGG | + | chr4.3:16632253-16632272 | None:intergenic | 35.0% | |
TCAGATAAGGATAGTTAGAG+GGG | + | chr4.3:16633164-16633183 | None:intergenic | 35.0% | |
TCGACTAATCCAAACCTTTA+GGG | + | chr4.3:16636169-16636188 | None:intergenic | 35.0% | |
TCTCAAGTTAATCTGGACAT+GGG | + | chr4.3:16635164-16635183 | None:intergenic | 35.0% | |
TCTGTATCAGGAACTATAAC+CGG | - | chr4.3:16637662-16637681 | MS.gene09047:intron | 35.0% | |
TCTTGTGTAGGTACGAAAAA+TGG | - | chr4.3:16637733-16637752 | MS.gene09047:intron | 35.0% | |
TGATAACAACATCAAGGCAA+AGG | - | chr4.3:16633591-16633610 | MS.gene09047:intron | 35.0% | |
TGGATCTCACCACTTTATAT+GGG | + | chr4.3:16637458-16637477 | None:intergenic | 35.0% | |
TTATATGGGATCCATTTCCA+AGG | + | chr4.3:16637444-16637463 | None:intergenic | 35.0% | |
TTCCAGAATCCTATAACAGT+AGG | + | chr4.3:16637241-16637260 | None:intergenic | 35.0% | |
TTCGCACTACTTATTTGCTT+TGG | - | chr4.3:16634289-16634308 | MS.gene09047:intron | 35.0% | |
TTGAGTTAGAACCTTGCAAA+GGG | - | chr4.3:16636829-16636848 | MS.gene09047:CDS | 35.0% | |
TTTAATCTGTAGACCTAGTC+TGG | + | chr4.3:16635357-16635376 | None:intergenic | 35.0% | |
! | AGCAATAGCAGAAACCTTTT+GGG | + | chr4.3:16635755-16635774 | None:intergenic | 35.0% |
! | AGTCTAAAACATAAGGCACA+AGG | + | chr4.3:16634096-16634115 | None:intergenic | 35.0% |
! | CATAATGGCATCTAAAGTCA+TGG | + | chr4.3:16633012-16633031 | None:intergenic | 35.0% |
! | CTATTGCTGTGATTCTGAAA+AGG | - | chr4.3:16635767-16635786 | MS.gene09047:CDS | 35.0% |
! | CTGAAAATTACCTGTTTCTC+TGG | - | chr4.3:16638256-16638275 | MS.gene09047:CDS | 35.0% |
! | GAAAATTACCTGTTTCTCTG+GGG | - | chr4.3:16638258-16638277 | MS.gene09047:CDS | 35.0% |
! | TAACGAACATATTTTCCCAC+AGG | + | chr4.3:16634756-16634775 | None:intergenic | 35.0% |
! | TATGAAGTCTTCTCCTTTTG+CGG | - | chr4.3:16633232-16633251 | MS.gene09047:intron | 35.0% |
! | TCATAGTGGTATTTCTGCAA+AGG | - | chr4.3:16633714-16633733 | MS.gene09047:intron | 35.0% |
!! | AACTGCACCTTAGCTTTATT+TGG | + | chr4.3:16635187-16635206 | None:intergenic | 35.0% |
!! | AATCTTTAAAGCTCCTGAGA+TGG | + | chr4.3:16634985-16635004 | None:intergenic | 35.0% |
!! | AGTGATTCACCGATTCTAAT+TGG | - | chr4.3:16634043-16634062 | MS.gene09047:intron | 35.0% |
!! | CTGCATTAATTTGCATGAAC+TGG | - | chr4.3:16633987-16634006 | MS.gene09047:intron | 35.0% |
!! | GAAGAAAAAGTGCCATTAGA+CGG | + | chr4.3:16635943-16635962 | None:intergenic | 35.0% |
!! | GTGATTCACCGATTCTAATT+GGG | - | chr4.3:16634044-16634063 | MS.gene09047:intron | 35.0% |
!! | GTGTGTTCTGAGTTTTCATA+TGG | - | chr4.3:16635481-16635500 | MS.gene09047:intron | 35.0% |
!! | TGTGTTTCAGGTTTAGTATG+TGG | - | chr4.3:16633436-16633455 | MS.gene09047:intron | 35.0% |
!! | TTATATTTAGAGGAGTGCTG+TGG | - | chr4.3:16637352-16637371 | MS.gene09047:intron | 35.0% |
!!! | ATGCTTTTAACTTCCGCAAA+AGG | + | chr4.3:16633248-16633267 | None:intergenic | 35.0% |
!!! | TGGGTTTTAAGCACTAAACA+AGG | + | chr4.3:16635145-16635164 | None:intergenic | 35.0% |
AAAGAGATGTTGGAGCAGTA+AGG | - | chr4.3:16633944-16633963 | MS.gene09047:intron | 40.0% | |
AAAGCTAAGGTGCAGTTTCT+AGG | - | chr4.3:16635190-16635209 | MS.gene09047:intron | 40.0% | |
AACAGCCTCTTGTGTAAAAC+AGG | + | chr4.3:16636935-16636954 | None:intergenic | 40.0% | |
AACTGAATTCAGCTTTGCCT+TGG | - | chr4.3:16632483-16632502 | MS.gene09047:intron | 40.0% | |
AAGACTTCATAAGCACCAGT+AGG | + | chr4.3:16633223-16633242 | None:intergenic | 40.0% | |
AATATCCAGGGCAGACATAA+TGG | + | chr4.3:16633027-16633046 | None:intergenic | 40.0% | |
ACAGCCTCTTGTGTAAAACA+GGG | + | chr4.3:16636934-16636953 | None:intergenic | 40.0% | |
ACATAAGGCACAAGGAAAAG+TGG | + | chr4.3:16634088-16634107 | None:intergenic | 40.0% | |
ACATGGGTTTCACCCAATAA+AGG | - | chr4.3:16637477-16637496 | MS.gene09047:CDS | 40.0% | |
ACCCCATATTGTATAAGGGT+AGG | + | chr4.3:16638371-16638390 | None:intergenic | 40.0% | |
AGTGATGTTGTATTCTGCAG+TGG | - | chr4.3:16633477-16633496 | MS.gene09047:intron | 40.0% | |
AGTTGTATGCCCTAAAGGTT+TGG | - | chr4.3:16636157-16636176 | MS.gene09047:CDS | 40.0% | |
ATAAAGGTGAGTCGTTACAC+AGG | - | chr4.3:16638179-16638198 | MS.gene09047:intron | 40.0% | |
ATAAAGTGGTGAGATCCACA+TGG | - | chr4.3:16637460-16637479 | MS.gene09047:CDS | 40.0% | |
ATAAGTCCTGACTCTGTATC+AGG | - | chr4.3:16637650-16637669 | MS.gene09047:intron | 40.0% | |
ATAGTTCCTGATACAGAGTC+AGG | + | chr4.3:16637659-16637678 | None:intergenic | 40.0% | |
ATCACACTTCATGCTTGCAA+AGG | - | chr4.3:16637825-16637844 | MS.gene09047:CDS | 40.0% | |
CAGCCTACCCTTATACAATA+TGG | - | chr4.3:16638365-16638384 | MS.gene09047:CDS | 40.0% | |
CATATTGTATAAGGGTAGGC+TGG | + | chr4.3:16638367-16638386 | None:intergenic | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr4.3:16636903-16636922 | None:intergenic | 40.0% | |
CTAACACCCACTCCTTTATT+GGG | + | chr4.3:16637492-16637511 | None:intergenic | 40.0% | |
CTCTTGTGTAAAACAGGGTA+AGG | + | chr4.3:16636929-16636948 | None:intergenic | 40.0% | |
CTGTATCAGGAACTATAACC+GGG | - | chr4.3:16637663-16637682 | MS.gene09047:intron | 40.0% | |
CTGTGAGAATCACCTAGTAA+AGG | + | chr4.3:16635397-16635416 | None:intergenic | 40.0% | |
GATCTGAAAACACGTAACGA+TGG | + | chr4.3:16636054-16636073 | None:intergenic | 40.0% | |
GATTTGATGCAGGGTAACAA+AGG | + | chr4.3:16636536-16636555 | None:intergenic | 40.0% | |
GATTTGTGCAAGGAATATCC+AGG | + | chr4.3:16633040-16633059 | None:intergenic | 40.0% | |
GCCTACCCTTATACAATATG+GGG | - | chr4.3:16638367-16638386 | MS.gene09047:CDS | 40.0% | |
GCGTCTAATACAACATTGCT+GGG | - | chr4.3:16633823-16633842 | MS.gene09047:intron | 40.0% | |
GCTAATCAGAGATTTGATGC+AGG | + | chr4.3:16636546-16636565 | None:intergenic | 40.0% | |
GGAGAATTGAGCTCTTTACT+TGG | - | chr4.3:16634221-16634240 | MS.gene09047:intron | 40.0% | |
GTAACTGAAAACCACTCATC+TGG | + | chr4.3:16634877-16634896 | None:intergenic | 40.0% | |
GTCTCAAGTTAATCTGGACA+TGG | + | chr4.3:16635165-16635184 | None:intergenic | 40.0% | |
GTGGATCTCACCACTTTATA+TGG | + | chr4.3:16637459-16637478 | None:intergenic | 40.0% | |
GTTGTTGTCATGTGACTGAA+AGG | + | chr4.3:16636978-16636997 | None:intergenic | 40.0% | |
GTTTCACCCAATAAAGGAGT+GGG | - | chr4.3:16637483-16637502 | MS.gene09047:CDS | 40.0% | |
GTTTCCGATACCATACACAA+GGG | + | chr4.3:16637123-16637142 | None:intergenic | 40.0% | |
TAAAGTGGTGAGATCCACAT+GGG | - | chr4.3:16637461-16637480 | MS.gene09047:CDS | 40.0% | |
TAATGTTGTCAACCTCAAGG+TGG | - | chr4.3:16635876-16635895 | MS.gene09047:intron | 40.0% | |
TATGAAGGTTGTTGCAACTG+TGG | - | chr4.3:16633900-16633919 | MS.gene09047:intron | 40.0% | |
TATGGGGTAAAACCCATTTC+TGG | - | chr4.3:16638383-16638402 | MS.gene09047:CDS | 40.0% | |
TCACCATCAATGTATCAGCA+TGG | + | chr4.3:16634935-16634954 | None:intergenic | 40.0% | |
TCTAACACCCACTCCTTTAT+TGG | + | chr4.3:16637493-16637512 | None:intergenic | 40.0% | |
TCTTCATTCAAGAATCGCTC+TGG | + | chr4.3:16632696-16632715 | None:intergenic | 40.0% | |
TGAGTCTCATGAATGAAGGT+CGG | + | chr4.3:16632923-16632942 | None:intergenic | 40.0% | |
TGCGTCTAATACAACATTGC+TGG | - | chr4.3:16633822-16633841 | MS.gene09047:intron | 40.0% | |
TGGTTCAAACAAGATCAGAG+TGG | - | chr4.3:16633762-16633781 | MS.gene09047:intron | 40.0% | |
TGTTTCCGATACCATACACA+AGG | + | chr4.3:16637124-16637143 | None:intergenic | 40.0% | |
TTACAGTTTACCTGGAAGTC+TGG | - | chr4.3:16634383-16634402 | MS.gene09047:intron | 40.0% | |
TTAGGTGACAGAAACTAGCA+AGG | + | chr4.3:16637918-16637937 | None:intergenic | 40.0% | |
TTCTGTCTGTTATCTCTGGT+GGG | - | chr4.3:16632718-16632737 | MS.gene09047:CDS | 40.0% | |
TTTATTGGGTGAAACCCATG+TGG | + | chr4.3:16637478-16637497 | None:intergenic | 40.0% | |
TTTCGTACCTACACAAGAAG+CGG | + | chr4.3:16637731-16637750 | None:intergenic | 40.0% | |
TTTCTGTCTGTTATCTCTGG+TGG | - | chr4.3:16632717-16632736 | MS.gene09047:CDS | 40.0% | |
! | AAGTCTGGAAGAGTATGTAC+AGG | - | chr4.3:16634398-16634417 | MS.gene09047:CDS | 40.0% |
! | ACTGCAAGGTTCTAACATGA+GGG | + | chr4.3:16637024-16637043 | None:intergenic | 40.0% |
! | CAAACCATTTTCCCCTGAAA+TGG | - | chr4.3:16635828-16635847 | MS.gene09047:CDS | 40.0% |
! | CAATTTTTCATCCGCAGTGA+AGG | - | chr4.3:16634671-16634690 | MS.gene09047:intron | 40.0% |
! | CAGCAATAGCAGAAACCTTT+TGG | + | chr4.3:16635756-16635775 | None:intergenic | 40.0% |
! | CTTACCCTGTTTTACACAAG+AGG | - | chr4.3:16636927-16636946 | MS.gene09047:intron | 40.0% |
! | GCAAATTTCAGGTGCGTATA+TGG | - | chr4.3:16633279-16633298 | MS.gene09047:CDS | 40.0% |
!! | ATTCATCGATTCCTTCACTG+CGG | + | chr4.3:16634685-16634704 | None:intergenic | 40.0% |
!! | CTGATACATTGATGGTGAAG+GGG | - | chr4.3:16634937-16634956 | MS.gene09047:intron | 40.0% |
!! | GCTGATACATTGATGGTGAA+GGG | - | chr4.3:16634936-16634955 | MS.gene09047:intron | 40.0% |
!! | GGTTTGGATTAGTCGATAAC+TGG | - | chr4.3:16636173-16636192 | MS.gene09047:CDS | 40.0% |
!! | TACGCTTGTTGTTAGTCCTT+TGG | - | chr4.3:16632234-16632253 | MS.gene09047:CDS | 40.0% |
!! | TGATACATTGATGGTGAAGG+GGG | - | chr4.3:16634938-16634957 | MS.gene09047:intron | 40.0% |
!! | TGCTGATACATTGATGGTGA+AGG | - | chr4.3:16634935-16634954 | MS.gene09047:intron | 40.0% |
!!! | CAGTGCTCAGGTTGATTTTA+CGG | - | chr4.3:16632318-16632337 | MS.gene09047:intron | 40.0% |
AACCATGCGCTTAAACAAGC+TGG | + | chr4.3:16636334-16636353 | None:intergenic | 45.0% | |
AACTGTGGCAAATGACATGG+GGG | - | chr4.3:16636110-16636129 | MS.gene09047:intron | 45.0% | |
AAGCTGGTTGAGTGTTTCAG+AGG | + | chr4.3:16632431-16632450 | None:intergenic | 45.0% | |
ACAATTGCCTCCGCTCATTT+CGG | - | chr4.3:16632282-16632301 | MS.gene09047:intron | 45.0% | |
ACACACGTTGCATTTGTCTG+TGG | + | chr4.3:16635467-16635486 | None:intergenic | 45.0% | |
ACATACTCTTCCAGACTTCC+AGG | + | chr4.3:16634396-16634415 | None:intergenic | 45.0% | |
ACATATGCAGTCGTTTCCTG+CGG | - | chr4.3:16638150-16638169 | MS.gene09047:intron | 45.0% | |
AGGACATGGCCTACTGTTAT+AGG | - | chr4.3:16637229-16637248 | MS.gene09047:intron | 45.0% | |
ATATCAAACCTGCGTGAAGC+AGG | + | chr4.3:16634788-16634807 | None:intergenic | 45.0% | |
CAACTGTGGCAAATGACATG+GGG | - | chr4.3:16636109-16636128 | MS.gene09047:intron | 45.0% | |
CATAACATCCTGTTGGGAGT+TGG | - | chr4.3:16634909-16634928 | MS.gene09047:intron | 45.0% | |
CCAACTGTGGCAAATGACAT+GGG | - | chr4.3:16636108-16636127 | MS.gene09047:intron | 45.0% | |
CCATCCATTTCAGGGGAAAA+TGG | + | chr4.3:16635835-16635854 | None:intergenic | 45.0% | |
CTAACAACAAGCGTAATCCC+AGG | + | chr4.3:16632229-16632248 | None:intergenic | 45.0% | |
CTGTAGACCTAGTCTGGAAA+AGG | + | chr4.3:16635351-16635370 | None:intergenic | 45.0% | |
GACTGGTGCCTATAAGTAGA+TGG | + | chr4.3:16635246-16635265 | None:intergenic | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr4.3:16636904-16636923 | None:intergenic | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | + | chr4.3:16636907-16636926 | None:intergenic | 45.0% | |
GCTTCGTCAAGGCACAATAA+AGG | - | chr4.3:16632447-16632466 | MS.gene09047:intron | 45.0% | |
GGCCTACTGTTATAGGATTC+TGG | - | chr4.3:16637236-16637255 | MS.gene09047:intron | 45.0% | |
GGTTTCACCCAATAAAGGAG+TGG | - | chr4.3:16637482-16637501 | MS.gene09047:CDS | 45.0% | |
GTCATGTGACTGAAAGGTCA+CGG | + | chr4.3:16636972-16636991 | None:intergenic | 45.0% | |
GTTGTTGCAACTGTGGCATT+TGG | - | chr4.3:16633907-16633926 | MS.gene09047:intron | 45.0% | |
TATCAGGAACTATAACCGGG+TGG | - | chr4.3:16637666-16637685 | MS.gene09047:intron | 45.0% | |
TCATGTGACTGAAAGGTCAC+GGG | + | chr4.3:16636971-16636990 | None:intergenic | 45.0% | |
TCCAACTGTGGCAAATGACA+TGG | - | chr4.3:16636107-16636126 | MS.gene09047:intron | 45.0% | |
TCTAACATGAGGGGTAACCT+TGG | + | chr4.3:16637014-16637033 | None:intergenic | 45.0% | |
TCTGCCCTTGTGTATGGTAT+CGG | - | chr4.3:16637116-16637135 | MS.gene09047:intron | 45.0% | |
TGGCCATGCTGATACATTGA+TGG | - | chr4.3:16634929-16634948 | MS.gene09047:intron | 45.0% | |
TTATTGTGCCTTGACGAAGC+TGG | + | chr4.3:16632447-16632466 | None:intergenic | 45.0% | |
TTGGATCAGATTCCACCTTG+AGG | + | chr4.3:16635891-16635910 | None:intergenic | 45.0% | |
TTTCCTGCGGGCAGATATAA+AGG | - | chr4.3:16638163-16638182 | MS.gene09047:intron | 45.0% | |
TTTGGCACTAATGCAGACTC+CGG | - | chr4.3:16635717-16635736 | MS.gene09047:intron | 45.0% | |
! | AGCAGAAACCTTTTGGGCAA+GGG | + | chr4.3:16635749-16635768 | None:intergenic | 45.0% |
! | ATCCAGCTTGTTTAAGCGCA+TGG | - | chr4.3:16636329-16636348 | MS.gene09047:intron | 45.0% |
! | CACTGCAAGGTTCTAACATG+AGG | + | chr4.3:16637025-16637044 | None:intergenic | 45.0% |
! | CCATTTTCCCCTGAAATGGA+TGG | - | chr4.3:16635832-16635851 | MS.gene09047:CDS | 45.0% |
! | CGTGTTACCTTTTCCAGACT+AGG | - | chr4.3:16635341-16635360 | MS.gene09047:intron | 45.0% |
! | CTAATTGGGCTCTAGTTGCA+TGG | - | chr4.3:16634058-16634077 | MS.gene09047:intron | 45.0% |
! | CTGCAAGGTTCTAACATGAG+GGG | + | chr4.3:16637023-16637042 | None:intergenic | 45.0% |
! | GAATGGGCATTGTAGGAGAT+AGG | - | chr4.3:16634491-16634510 | MS.gene09047:intron | 45.0% |
! | GCTCTGAGTCTCATGAATGA+AGG | + | chr4.3:16632927-16632946 | None:intergenic | 45.0% |
! | GGTATTTCTGCAAAGGAACG+TGG | - | chr4.3:16633721-16633740 | MS.gene09047:intron | 45.0% |
! | TAGCAGAAACCTTTTGGGCA+AGG | + | chr4.3:16635750-16635769 | None:intergenic | 45.0% |
! | TTACACAAGAGGCTGTTTCC+AGG | - | chr4.3:16636938-16636957 | MS.gene09047:intron | 45.0% |
!! | ACTTTCTAGTTTGGGACACC+TGG | - | chr4.3:16637079-16637098 | MS.gene09047:intron | 45.0% |
!! | TCTCACAGTTTTGACACGCT+TGG | - | chr4.3:16635409-16635428 | MS.gene09047:intron | 45.0% |
!!! | TGAGTGCGTTGATTTTGCCT+GGG | - | chr4.3:16632209-16632228 | MS.gene09047:CDS | 45.0% |
!!! | TTGAGTGCGTTGATTTTGCC+TGG | - | chr4.3:16632208-16632227 | MS.gene09047:CDS | 45.0% |
AAAGGAACGTGGCTACGTAC+AGG | - | chr4.3:16633732-16633751 | MS.gene09047:intron | 50.0% | |
AAGGGCAGAGTAGGCCAAAT+TGG | + | chr4.3:16637105-16637124 | None:intergenic | 50.0% | |
ACACTCAACCAGCTTCGTCA+AGG | - | chr4.3:16632436-16632455 | MS.gene09047:intron | 50.0% | |
ACCATACACAAGGGCAGAGT+AGG | + | chr4.3:16637114-16637133 | None:intergenic | 50.0% | |
AGATGCCATTATGTCTGCCC+TGG | - | chr4.3:16633019-16633038 | MS.gene09047:intron | 50.0% | |
AGGGAACGCATACCGTCTAA+TGG | - | chr4.3:16635928-16635947 | MS.gene09047:intron | 50.0% | |
ATTACCCTCGCAACAGCTCT+TGG | + | chr4.3:16638328-16638347 | None:intergenic | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | - | chr4.3:16636994-16637013 | MS.gene09047:intron | 50.0% | |
CAATTGCCTCCGCTCATTTC+GGG | - | chr4.3:16632283-16632302 | MS.gene09047:intron | 50.0% | |
CATATGCAGTCGTTTCCTGC+GGG | - | chr4.3:16638151-16638170 | MS.gene09047:intron | 50.0% | |
CATGGTTCCGCTTCTTGTGT+AGG | - | chr4.3:16637721-16637740 | MS.gene09047:intron | 50.0% | |
CTGCTGACAAAAGCTCCTGT+GGG | - | chr4.3:16634738-16634757 | MS.gene09047:intron | 50.0% | |
CTGGTAATCCCCAGAGAAAC+AGG | + | chr4.3:16638269-16638288 | None:intergenic | 50.0% | |
GCAACTGTGGCATTTGGCAT+GGG | - | chr4.3:16633913-16633932 | MS.gene09047:intron | 50.0% | |
GGCTACGTACAGGAGTTGTT+TGG | - | chr4.3:16633742-16633761 | MS.gene09047:intron | 50.0% | |
GGGATCCATTTCCAAGGTGT+GGG | + | chr4.3:16637438-16637457 | None:intergenic | 50.0% | |
TACACCAAGAGCTGTTGCGA+GGG | - | chr4.3:16638321-16638340 | MS.gene09047:CDS | 50.0% | |
TCAAAGAACCTGCTTCACGC+AGG | - | chr4.3:16634777-16634796 | MS.gene09047:intron | 50.0% | |
TCACCTTTATATCTGCCCGC+AGG | + | chr4.3:16638169-16638188 | None:intergenic | 50.0% | |
TGAGTCCCACACCTTGGAAA+TGG | - | chr4.3:16637430-16637449 | MS.gene09047:intron | 50.0% | |
TGCAACTGTGGCATTTGGCA+TGG | - | chr4.3:16633912-16633931 | MS.gene09047:intron | 50.0% | |
TGGGATCCATTTCCAAGGTG+TGG | + | chr4.3:16637439-16637458 | None:intergenic | 50.0% | |
TTACACCAAGAGCTGTTGCG+AGG | - | chr4.3:16638320-16638339 | MS.gene09047:CDS | 50.0% | |
TTGTAGGAGATAGGACGTGC+CGG | - | chr4.3:16634500-16634519 | MS.gene09047:intron | 50.0% | |
! | CCCATGTCATTTGCCACAGT+TGG | + | chr4.3:16636111-16636130 | None:intergenic | 50.0% |
! | CTGTTTCTCTGGGGATTACC+AGG | - | chr4.3:16638267-16638286 | MS.gene09047:CDS | 50.0% |
! | TTTGGGACACCTGGCCAATT+TGG | - | chr4.3:16637088-16637107 | MS.gene09047:intron | 50.0% |
!! | AGTTTTGACACGCTTGGAGC+TGG | - | chr4.3:16635415-16635434 | MS.gene09047:intron | 50.0% |
!! | GTTTTGACACGCTTGGAGCT+GGG | - | chr4.3:16635416-16635435 | MS.gene09047:intron | 50.0% |
!! | TTATTTTGCCGACGGGTGCT+GGG | - | chr4.3:16632167-16632186 | MS.gene09047:CDS | 50.0% |
AAGGTCACGGGTTCAAGTCC+TGG | + | chr4.3:16636959-16636978 | None:intergenic | 55.0% | |
CAGAGTAGGCCAAATTGGCC+AGG | + | chr4.3:16637100-16637119 | None:intergenic | 55.0% | |
CCAAGGTGTGGGACTCACAT+AGG | + | chr4.3:16637427-16637446 | None:intergenic | 55.0% | |
CCTATGTGAGTCCCACACCT+TGG | - | chr4.3:16637424-16637443 | MS.gene09047:intron | 55.0% | |
CCTGCTGACAAAAGCTCCTG+TGG | - | chr4.3:16634737-16634756 | MS.gene09047:intron | 55.0% | |
CGCTCTTCTAAGCAGTGCTC+AGG | - | chr4.3:16632306-16632325 | MS.gene09047:intron | 55.0% | |
GAACCTTGCAAAGGGCAACC+CGG | - | chr4.3:16636837-16636856 | MS.gene09047:CDS | 55.0% | |
GCCTACTCTGCCCTTGTGTA+TGG | - | chr4.3:16637110-16637129 | MS.gene09047:intron | 55.0% | |
GCTGTTGCGAGGGTAATGCA+CGG | - | chr4.3:16638331-16638350 | MS.gene09047:CDS | 55.0% | |
! | CCACAGGAGCTTTTGTCAGC+AGG | + | chr4.3:16634740-16634759 | None:intergenic | 55.0% |
! | TTTTGGGCAAGGGACACAGC+CGG | + | chr4.3:16635739-16635758 | None:intergenic | 55.0% |
!! | AGAAGAGCGCCCGAAATGAG+CGG | + | chr4.3:16632295-16632314 | None:intergenic | 55.0% |
!!! | CTTATTTTGCCGACGGGTGC+TGG | - | chr4.3:16632166-16632185 | MS.gene09047:CDS | 55.0% |
AACGACTTCCCAGCACCCGT+CGG | + | chr4.3:16632178-16632197 | None:intergenic | 60.0% | |
ACTAGAGCCCCCGCATATGC+AGG | - | chr4.3:16636863-16636882 | MS.gene09047:intron | 60.0% | |
AGGAGATAGGACGTGCCGGA+AGG | - | chr4.3:16634504-16634523 | MS.gene09047:intron | 60.0% | |
AGGGGTAACCTTGGCGCAAC+TGG | + | chr4.3:16637005-16637024 | None:intergenic | 60.0% | |
ATAGGACGTGCCGGAAGGGA+TGG | - | chr4.3:16634509-16634528 | MS.gene09047:intron | 60.0% | |
CAGCATGGCCAACTCCCAAC+AGG | + | chr4.3:16634920-16634939 | None:intergenic | 60.0% | |
CATATGCAGGGTCCGGGAAG+GGG | - | chr4.3:16636876-16636895 | MS.gene09047:intron | 60.0% | |
CTAGAGCCCCCGCATATGCA+GGG | - | chr4.3:16636864-16636883 | MS.gene09047:intron | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | + | chr4.3:16636876-16636895 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | - | chr4.3:16636875-16636894 | MS.gene09047:intron | 60.0% | |
GGACAACCTCCCATCCCTTC+CGG | + | chr4.3:16634522-16634541 | None:intergenic | 60.0% | |
GGAGATAGGACGTGCCGGAA+GGG | - | chr4.3:16634505-16634524 | MS.gene09047:intron | 60.0% | |
GGCTGTGTCCCTTGCCCAAA+AGG | - | chr4.3:16635738-16635757 | MS.gene09047:intron | 60.0% | |
TAGGACGTGCCGGAAGGGAT+GGG | - | chr4.3:16634510-16634529 | MS.gene09047:intron | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | + | chr4.3:16636875-16636894 | None:intergenic | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4.3:16636891-16636910 | None:intergenic | 60.0% |
CGCATATGCAGGGTCCGGGA+AGG | - | chr4.3:16636874-16636893 | MS.gene09047:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr4.3:16636889-16636908 | MS.gene09047:intron | 65.0% | |
GCACCGGGTTGCCCTTTGCA+AGG | + | chr4.3:16636843-16636862 | None:intergenic | 65.0% | |
TCCCGGACCCTGCATATGCG+GGG | + | chr4.3:16636874-16636893 | None:intergenic | 65.0% | |
! | AGAGCGCCCGAAATGAGCGG+AGG | + | chr4.3:16632292-16632311 | None:intergenic | 65.0% |
! | ATGCGGGGGCTCTAGTGCAC+CGG | + | chr4.3:16636859-16636878 | None:intergenic | 65.0% |
CCCCCGCATATGCAGGGTCC+GGG | - | chr4.3:16636870-16636889 | MS.gene09047:intron | 70.0% | |
CCCGGACCCTGCATATGCGG+GGG | + | chr4.3:16636873-16636892 | None:intergenic | 70.0% | |
GACGTGCCGGAAGGGATGGG+AGG | - | chr4.3:16634513-16634532 | MS.gene09047:intron | 70.0% | |
GCCCCCGCATATGCAGGGTC+CGG | - | chr4.3:16636869-16636888 | MS.gene09047:intron | 70.0% | |
! | TGCGGGGGCTCTAGTGCACC+GGG | + | chr4.3:16636858-16636877 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 16632163 | 16638404 | 16632163 | ID=MS.gene09047 |
chr4.3 | mRNA | 16632163 | 16638404 | 16632163 | ID=MS.gene09047.t1;Parent=MS.gene09047 |
chr4.3 | exon | 16638240 | 16638404 | 16638240 | ID=MS.gene09047.t1.exon1;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16638240 | 16638404 | 16638240 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16638099 | 16638152 | 16638099 | ID=MS.gene09047.t1.exon2;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16638099 | 16638152 | 16638099 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16637777 | 16637889 | 16637777 | ID=MS.gene09047.t1.exon3;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16637777 | 16637889 | 16637777 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16637447 | 16637659 | 16637447 | ID=MS.gene09047.t1.exon4;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16637447 | 16637659 | 16637447 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16637278 | 16637356 | 16637278 | ID=MS.gene09047.t1.exon5;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16637278 | 16637356 | 16637278 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16636955 | 16637008 | 16636955 | ID=MS.gene09047.t1.exon6;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16636955 | 16637008 | 16636955 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16636784 | 16636858 | 16636784 | ID=MS.gene09047.t1.exon7;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16636784 | 16636858 | 16636784 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16636607 | 16636660 | 16636607 | ID=MS.gene09047.t1.exon8;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16636607 | 16636660 | 16636607 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16636148 | 16636192 | 16636148 | ID=MS.gene09047.t1.exon9;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16636148 | 16636192 | 16636148 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16635967 | 16636061 | 16635967 | ID=MS.gene09047.t1.exon10;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16635967 | 16636061 | 16635967 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16635750 | 16635879 | 16635750 | ID=MS.gene09047.t1.exon11;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16635750 | 16635879 | 16635750 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16635065 | 16635163 | 16635065 | ID=MS.gene09047.t1.exon12;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16635065 | 16635163 | 16635065 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16634779 | 16634834 | 16634779 | ID=MS.gene09047.t1.exon13;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16634779 | 16634834 | 16634779 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16634394 | 16634496 | 16634394 | ID=MS.gene09047.t1.exon14;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16634394 | 16634496 | 16634394 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16633238 | 16633366 | 16633238 | ID=MS.gene09047.t1.exon15;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16633238 | 16633366 | 16633238 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16632655 | 16632824 | 16632655 | ID=MS.gene09047.t1.exon16;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16632655 | 16632824 | 16632655 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16632383 | 16632407 | 16632383 | ID=MS.gene09047.t1.exon17;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16632383 | 16632407 | 16632383 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
chr4.3 | exon | 16632163 | 16632278 | 16632163 | ID=MS.gene09047.t1.exon18;Parent=MS.gene09047.t1 |
chr4.3 | CDS | 16632163 | 16632278 | 16632163 | ID=cds.MS.gene09047.t1;Parent=MS.gene09047.t1 |
Gene Sequence |
Protein sequence |