Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09173.t1 | XP_013455926.1 | 94.9 | 455 | 23 | 0 | 1 | 455 | 1 | 455 | 1.50E-236 | 828.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09173.t1 | A0A072UJV4 | 94.9 | 455 | 23 | 0 | 1 | 455 | 1 | 455 | 1.0e-236 | 828.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052609 | MS.gene09173 | 0.801041 | 1.09E-48 | -1.69E-46 |
| MS.gene057320 | MS.gene09173 | 0.802944 | 4.41E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09173.t1 | MTR_4g057493 | 95.385 | 455 | 21 | 0 | 1 | 455 | 1 | 455 | 0.0 | 830 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09173.t1 | AT2G28130 | 48.458 | 454 | 227 | 5 | 1 | 451 | 3 | 452 | 1.08e-138 | 406 |
Find 88 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCCTAGATCGCCGGTTTC+AGG | 0.119990 | 4.3:+43649469 | MS.gene09173:CDS |
| TGATCCAGGCTCTAATATTT+TGG | 0.122355 | 4.3:-43649184 | None:intergenic |
| GAGGATCTCTTCTCCATTGC+TGG | 0.252954 | 4.3:-43651905 | None:intergenic |
| TGGTGTGAAATTCTCTCTTC+TGG | 0.261367 | 4.3:+43648660 | MS.gene09173:CDS |
| CCTCTGGACTTTCCTGATCT+TGG | 0.267014 | 4.3:+43647854 | MS.gene09173:CDS |
| AGAACTCTTCCAGCGACTTT+TGG | 0.269592 | 4.3:+43648640 | MS.gene09173:CDS |
| CTCTTCTTGTTGATAGGAAT+TGG | 0.284634 | 4.3:-43646728 | None:intergenic |
| TGAACCAGGAAGAAGGTTAT+TGG | 0.291770 | 4.3:+43647383 | MS.gene09173:intron |
| TGCAGCTCGAGCACCATTCT+TGG | 0.317218 | 4.3:-43649547 | None:intergenic |
| AGAAAATGAAATTCCAGTTT+GGG | 0.328827 | 4.3:+43647686 | MS.gene09173:CDS |
| TCCTCTCATGGATGACCCTT+TGG | 0.329890 | 4.3:+43646676 | None:intergenic |
| AAGAAAATGAAATTCCAGTT+TGG | 0.333615 | 4.3:+43647685 | MS.gene09173:CDS |
| CTTATCCAGTTGAAAGCCTT+TGG | 0.336065 | 4.3:+43647660 | MS.gene09173:intron |
| TTCCTAGATCGCCGGTTTCA+GGG | 0.340644 | 4.3:+43649470 | MS.gene09173:CDS |
| GATTTGTCACTTACTGTTGC+CGG | 0.341285 | 4.3:+43649207 | MS.gene09173:CDS |
| GAATAAGCAGGCAAAGAAAA+AGG | 0.341389 | 4.3:+43647463 | MS.gene09173:CDS |
| ACTTAGTCTTGGCAAAGAAT+TGG | 0.347809 | 4.3:+43651989 | MS.gene09173:CDS |
| TCCATCAAAACAAGAAAGTA+TGG | 0.357609 | 4.3:-43649772 | None:intergenic |
| ACAAGAAAGTATGGTTTGAT+AGG | 0.359095 | 4.3:-43649763 | None:intergenic |
| TCACTTACTGTTGCCGGATA+AGG | 0.370608 | 4.3:+43649213 | MS.gene09173:CDS |
| CAGAAGTTAGTTCTCGTTGC+AGG | 0.380943 | 4.3:+43649721 | MS.gene09173:CDS |
| TTTGTTTCAGGTTCGTCATA+AGG | 0.383280 | 4.3:+43652201 | MS.gene09173:intron |
| ACCCCTGAAACCGGCGATCT+AGG | 0.396219 | 4.3:-43649472 | None:intergenic |
| AGAAGTGCTCTTGACACCTA+TGG | 0.401283 | 4.3:+43648871 | MS.gene09173:CDS |
| GAACCAGGAAGAAGGTTATT+GGG | 0.408182 | 4.3:+43647384 | MS.gene09173:intron |
| CTTGAAGGGTTACTAGTCAA+TGG | 0.408976 | 4.3:+43648423 | MS.gene09173:CDS |
| TAGCGAAATTCATTGCTTGC+AGG | 0.412070 | 4.3:+43649576 | MS.gene09173:CDS |
| GAATACCTCTTCTTGTTGAT+AGG | 0.414555 | 4.3:-43646734 | None:intergenic |
| GTTCTCGTTGCAGGCAACTT+AGG | 0.438641 | 4.3:+43649730 | MS.gene09173:CDS |
| ATTGTCTTCAACAGAGTTGT+CGG | 0.439051 | 4.3:-43652019 | None:intergenic |
| AAAAGTCGCTGGAAGAGTTC+TGG | 0.441551 | 4.3:-43648638 | None:intergenic |
| TAATTGCATCAAGTGATTTG+AGG | 0.446980 | 4.3:-43651924 | None:intergenic |
| GCACCAACAACCCCTGAAAC+CGG | 0.449227 | 4.3:-43649481 | None:intergenic |
| GTAAGGAAGCTCACTTGAAT+AGG | 0.449835 | 4.3:+43647525 | MS.gene09173:CDS |
| GTGCTGCCGCTTACCTTATC+CGG | 0.467842 | 4.3:-43649226 | None:intergenic |
| CTCTTGGATCTGCAGAGTCT+CGG | 0.472201 | 4.3:+43649662 | MS.gene09173:intron |
| TCGCCGGTTTCAGGGGTTGT+TGG | 0.472738 | 4.3:+43649478 | MS.gene09173:CDS |
| ATTGTACATTCACTTAGTCT+TGG | 0.473415 | 4.3:+43651978 | MS.gene09173:CDS |
| CGGAGGATTTGAATTGCATC+CGG | 0.479015 | 4.3:+43649682 | MS.gene09173:CDS |
| TGAACTTTCATGCGCAGCAC+TGG | 0.486187 | 4.3:-43648914 | None:intergenic |
| TCAGGAGATAGCTTTCTTGA+AGG | 0.486515 | 4.3:+43648408 | MS.gene09173:intron |
| GTTTCTCAACATGGCAGGAC+AGG | 0.490324 | 4.3:-43648467 | None:intergenic |
| TAATGAACACTACAAAGAAC+AGG | 0.495258 | 4.3:+43647421 | MS.gene09173:CDS |
| ATTTATGTGAACCAGGAAGA+AGG | 0.497195 | 4.3:+43647376 | MS.gene09173:intron |
| TAGGTCAGTTGGTGAAATTA+AGG | 0.500524 | 4.3:-43652088 | None:intergenic |
| CAGGAGATAGCTTTCTTGAA+GGG | 0.501227 | 4.3:+43648409 | MS.gene09173:intron |
| AGTTGAGAAATGTCACAATC+AGG | 0.503232 | 4.3:+43647550 | MS.gene09173:CDS |
| AAGTTACAACTTCCAAGATC+AGG | 0.503695 | 4.3:-43647866 | None:intergenic |
| GAAAAGAACAGAACATCTCA+TGG | 0.509551 | 4.3:-43652050 | None:intergenic |
| CAGGAAGAAGGTTATTGGGT+TGG | 0.509763 | 4.3:+43647388 | MS.gene09173:intron |
| CTTCTCAAATCTTTGTACTC+AGG | 0.515062 | 4.3:-43648853 | None:intergenic |
| TCCTAGATCGCCGGTTTCAG+GGG | 0.520403 | 4.3:+43649471 | MS.gene09173:CDS |
| GAAGTGCTCTTGACACCTAT+GGG | 0.525369 | 4.3:+43648872 | MS.gene09173:CDS |
| AAGGGTTACTAGTCAATGGT+TGG | 0.525471 | 4.3:+43648427 | MS.gene09173:CDS |
| AGTGCTGCGCATGAAAGTTC+AGG | 0.535890 | 4.3:+43648916 | MS.gene09173:CDS |
| CACCCCAAAATATTAGAGCC+TGG | 0.537953 | 4.3:+43649180 | MS.gene09173:CDS |
| ACTAAATTCTGTGGTCGAGT+TGG | 0.541941 | 4.3:+43647913 | MS.gene09173:CDS |
| TACAGGTTTCTCAACATGGC+AGG | 0.542168 | 4.3:-43648472 | None:intergenic |
| TTGTCTTTAGATTCTAACAA+TGG | 0.544452 | 4.3:+43649152 | MS.gene09173:intron |
| AATTCTCTCTTCTGGAAATG+AGG | 0.545239 | 4.3:+43648668 | MS.gene09173:CDS |
| ATACGATGATGAAGATCGTA+AGG | 0.547691 | 4.3:+43647508 | MS.gene09173:CDS |
| TGCAGAGAAGCAGAATAAGC+AGG | 0.550228 | 4.3:+43647451 | MS.gene09173:CDS |
| GTAAGTGACAAATCTGATCC+AGG | 0.551430 | 4.3:-43649198 | None:intergenic |
| AATTTCACACCAAAAGTCGC+TGG | 0.555610 | 4.3:-43648649 | None:intergenic |
| CTGAAACACATTCAACAGTC+CGG | 0.557796 | 4.3:-43649701 | None:intergenic |
| TATGTCTGTTCCTAGATCGC+CGG | 0.569446 | 4.3:+43649462 | MS.gene09173:CDS |
| GTCGAGTTGGCCGCAGACAA+AGG | 0.569597 | 4.3:+43647926 | MS.gene09173:CDS |
| GAAAATGAAATTCCAGTTTG+GGG | 0.570817 | 4.3:+43647687 | MS.gene09173:CDS |
| GCATAAGATCGTAGGTCAGT+TGG | 0.571279 | 4.3:-43652099 | None:intergenic |
| AAGTATGGTTTGATAGGCAA+TGG | 0.575382 | 4.3:-43649757 | None:intergenic |
| TCTTGTAACTCGAAATCCAA+AGG | 0.578852 | 4.3:-43646692 | None:intergenic |
| AAGCTACAGGTTTCTCAACA+TGG | 0.589442 | 4.3:-43648476 | None:intergenic |
| GAACAACAGACTAAATTCTG+TGG | 0.589780 | 4.3:+43647904 | MS.gene09173:CDS |
| CTTGTAACTCGAAATCCAAA+GGG | 0.590946 | 4.3:-43646691 | None:intergenic |
| TCTTTAGATTCTAACAATGG+AGG | 0.593846 | 4.3:+43649155 | MS.gene09173:intron |
| TGATAGGAATTGGTACGAGA+AGG | 0.594531 | 4.3:-43646718 | None:intergenic |
| AAATGAAATTCCAGTTTGGG+GGG | 0.608006 | 4.3:+43647689 | MS.gene09173:CDS |
| CAATTCCTATCAACAAGAAG+AGG | 0.608258 | 4.3:+43646729 | MS.gene09173:CDS |
| AAACTTAAAGAGAAACCCAT+AGG | 0.611544 | 4.3:-43648887 | None:intergenic |
| CCTACGATCTTATGCGTCCG+AGG | 0.621715 | 4.3:+43652107 | MS.gene09173:CDS |
| CAAGATCAGGAAAGTCCAGA+GGG | 0.626667 | 4.3:-43647853 | None:intergenic |
| AAAATGAAATTCCAGTTTGG+GGG | 0.627252 | 4.3:+43647688 | MS.gene09173:CDS |
| CCTCGGACGCATAAGATCGT+AGG | 0.639986 | 4.3:-43652107 | None:intergenic |
| ATCATAGCAACCTTTGTCTG+CGG | 0.650589 | 4.3:-43647936 | None:intergenic |
| AGATCAGGAAAGTCCAGAGG+GGG | 0.661671 | 4.3:-43647851 | None:intergenic |
| TTGGATCTGCAGAGTCTCGG+AGG | 0.664576 | 4.3:+43649665 | MS.gene09173:intron |
| CCAAGATCAGGAAAGTCCAG+AGG | 0.678827 | 4.3:-43647854 | None:intergenic |
| AAGATCAGGAAAGTCCAGAG+GGG | 0.772454 | 4.3:-43647852 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAACACTAAATTATATT+TGG | + | chr4.3:43650783-43650802 | MS.gene09173:intron | 10.0% |
| !! | ATAAGATTTATATAATCTAT+CGG | + | chr4.3:43651288-43651307 | MS.gene09173:intron | 10.0% |
| !! | TTAATATATATAGAGAATAA+AGG | - | chr4.3:43648769-43648788 | None:intergenic | 10.0% |
| !! | TTTAAATATATAACTCTAAT+GGG | + | chr4.3:43650453-43650472 | MS.gene09173:intron | 10.0% |
| !!! | ATTTTTAATCAGTTATTATT+TGG | + | chr4.3:43652149-43652168 | MS.gene09173:intron | 10.0% |
| !!! | TTTTACAATTTTTTCTTTTT+GGG | + | chr4.3:43647121-43647140 | MS.gene09173:intron | 10.0% |
| !!! | TTTTTACAATTTTTTCTTTT+TGG | + | chr4.3:43647120-43647139 | MS.gene09173:intron | 10.0% |
| !! | AATGAGTTATTATACAAAAT+AGG | + | chr4.3:43651083-43651102 | MS.gene09173:intron | 15.0% |
| !! | ACTTGTTTAAATCAAATAAA+GGG | - | chr4.3:43647223-43647242 | None:intergenic | 15.0% |
| !! | CTTTAAATATATAACTCTAA+TGG | + | chr4.3:43650452-43650471 | MS.gene09173:intron | 15.0% |
| !! | TAAAAAACAAATGTAAGAAA+TGG | - | chr4.3:43647598-43647617 | None:intergenic | 15.0% |
| !! | TACTTGTTTAAATCAAATAA+AGG | - | chr4.3:43647224-43647243 | None:intergenic | 15.0% |
| !! | TCTTATTATTTAATCCTAAT+GGG | + | chr4.3:43650478-43650497 | MS.gene09173:intron | 15.0% |
| !!! | TGCATAAAAGTTTAAATTTT+GGG | - | chr4.3:43646824-43646843 | None:intergenic | 15.0% |
| !!! | TTAGGTTCTTATTTTAAAAA+GGG | + | chr4.3:43650678-43650697 | MS.gene09173:intron | 15.0% |
| !!! | TTGCATAAAAGTTTAAATTT+TGG | - | chr4.3:43646825-43646844 | None:intergenic | 15.0% |
| !! | AATAAATAAACTTGATGGAA+GGG | - | chr4.3:43649811-43649830 | None:intergenic | 20.0% |
| !! | AATTAAAATTTATGTGAACC+AGG | + | chr4.3:43647369-43647388 | MS.gene09173:intron | 20.0% |
| !! | ACAACAATAAATAAACTTGA+TGG | - | chr4.3:43649816-43649835 | None:intergenic | 20.0% |
| !! | ACTATAAAATGTAGATCTAA+GGG | + | chr4.3:43651630-43651649 | MS.gene09173:intron | 20.0% |
| !! | CATATATGAAGTTAAATGAA+GGG | + | chr4.3:43649837-43649856 | MS.gene09173:intron | 20.0% |
| !! | CATCAATAAAAATTTGAGAA+TGG | - | chr4.3:43650583-43650602 | None:intergenic | 20.0% |
| !! | CATTAGGATTAAATAATAAG+AGG | - | chr4.3:43650479-43650498 | None:intergenic | 20.0% |
| !! | CTCTTATTATTTAATCCTAA+TGG | + | chr4.3:43650477-43650496 | MS.gene09173:intron | 20.0% |
| !! | GAAATAAGATATTCATGAAA+TGG | - | chr4.3:43649029-43649048 | None:intergenic | 20.0% |
| !! | TAATGTATTCAAATCTCTTA+TGG | - | chr4.3:43648949-43648968 | None:intergenic | 20.0% |
| !! | TTTGCAATATTAAAGATAGA+TGG | - | chr4.3:43648018-43648037 | None:intergenic | 20.0% |
| !!! | AAAATCATTTGGGTTATATA+TGG | - | chr4.3:43649262-43649281 | None:intergenic | 20.0% |
| !!! | AAATCTATGTTTTTTTCACA+TGG | + | chr4.3:43646844-43646863 | MS.gene09173:intron | 20.0% |
| !!! | AATCTATGTTTTTTTCACAT+GGG | + | chr4.3:43646845-43646864 | MS.gene09173:intron | 20.0% |
| !!! | AATTTTCTGTCAAAATTGAT+TGG | + | chr4.3:43648827-43648846 | MS.gene09173:CDS | 20.0% |
| !!! | AATTTTTTCTTTTTGGGTTT+GGG | + | chr4.3:43647127-43647146 | MS.gene09173:intron | 20.0% |
| !!! | ATCTATGTGTTTTTGTTAAA+TGG | + | chr4.3:43647193-43647212 | MS.gene09173:intron | 20.0% |
| !!! | GACATAAAATTTGCAATTTT+GGG | - | chr4.3:43647171-43647190 | None:intergenic | 20.0% |
| !!! | GTTAGGTTCTTATTTTAAAA+AGG | + | chr4.3:43650677-43650696 | MS.gene09173:intron | 20.0% |
| !!! | TAATTTGTAGGTACTTAATT+AGG | + | chr4.3:43649968-43649987 | MS.gene09173:intron | 20.0% |
| !!! | TAATTTGTAGGTAGTTAATT+AGG | + | chr4.3:43650089-43650108 | MS.gene09173:intron | 20.0% |
| !!! | TCTATGTGTTTTTGTTAAAT+GGG | + | chr4.3:43647194-43647213 | MS.gene09173:intron | 20.0% |
| !!! | TGACATAAAATTTGCAATTT+TGG | - | chr4.3:43647172-43647191 | None:intergenic | 20.0% |
| !!! | TGGTTTAAAATTGAAAAACA+CGG | - | chr4.3:43647998-43648017 | None:intergenic | 20.0% |
| !!! | TTTTTCAAAGATTCAATTCT+TGG | + | chr4.3:43650753-43650772 | MS.gene09173:intron | 20.0% |
| ! | AAAACATGTGTTTATAAGTG+GGG | - | chr4.3:43650406-43650425 | None:intergenic | 25.0% |
| ! | AAAATTTGAGAATGGATGTT+AGG | - | chr4.3:43650575-43650594 | None:intergenic | 25.0% |
| ! | AACATGACAGAAAAATCATT+TGG | - | chr4.3:43649273-43649292 | None:intergenic | 25.0% |
| ! | AAGAAAATGAAATTCCAGTT+TGG | + | chr4.3:43647685-43647704 | MS.gene09173:CDS | 25.0% |
| ! | ACATGACAGAAAAATCATTT+GGG | - | chr4.3:43649272-43649291 | None:intergenic | 25.0% |
| ! | AGAAAATGAAATTCCAGTTT+GGG | + | chr4.3:43647686-43647705 | MS.gene09173:CDS | 25.0% |
| ! | ATAAATAAACTTGATGGAAG+GGG | - | chr4.3:43649810-43649829 | None:intergenic | 25.0% |
| ! | ATATAAATCTTATGTTGTCG+TGG | - | chr4.3:43651281-43651300 | None:intergenic | 25.0% |
| ! | CAAAACATGTGTTTATAAGT+GGG | - | chr4.3:43650407-43650426 | None:intergenic | 25.0% |
| ! | CAATAAATAAACTTGATGGA+AGG | - | chr4.3:43649812-43649831 | None:intergenic | 25.0% |
| ! | CACTATAAAATGTAGATCTA+AGG | + | chr4.3:43651629-43651648 | MS.gene09173:intron | 25.0% |
| ! | CTATAAAATGTAGATCTAAG+GGG | + | chr4.3:43651631-43651650 | MS.gene09173:intron | 25.0% |
| ! | GATACTACTGCAATTAAATT+TGG | - | chr4.3:43651794-43651813 | None:intergenic | 25.0% |
| ! | GATGAGATATTAAAATGCTT+CGG | + | chr4.3:43650952-43650971 | MS.gene09173:intron | 25.0% |
| ! | GATTTATATAATCTATCGGT+AGG | + | chr4.3:43651292-43651311 | MS.gene09173:intron | 25.0% |
| ! | GCATATATGAAGTTAAATGA+AGG | + | chr4.3:43649836-43649855 | MS.gene09173:intron | 25.0% |
| ! | TAAAACACTAAATTTCTTGC+TGG | - | chr4.3:43651044-43651063 | None:intergenic | 25.0% |
| ! | TAATACCATCTTAGAATTTG+TGG | + | chr4.3:43650038-43650057 | MS.gene09173:intron | 25.0% |
| ! | TTGTCTTTAGATTCTAACAA+TGG | + | chr4.3:43649152-43649171 | MS.gene09173:intron | 25.0% |
| !! | AAATTTTTCTGACCTATATG+TGG | + | chr4.3:43650715-43650734 | MS.gene09173:intron | 25.0% |
| !! | AATTTCATTTTCTTCTCCAA+AGG | - | chr4.3:43647679-43647698 | None:intergenic | 25.0% |
| !! | CTTTTACTTACTTGTGTTAA+AGG | - | chr4.3:43648508-43648527 | None:intergenic | 25.0% |
| !! | TTAAGTAGATTTAAAGCAAG+AGG | - | chr4.3:43650504-43650523 | None:intergenic | 25.0% |
| !! | TTCTAAAAAGGGGAAAATAA+CGG | - | chr4.3:43646791-43646810 | None:intergenic | 25.0% |
| !!! | ACATTGATATTGTTTTTCTC+AGG | + | chr4.3:43651847-43651866 | MS.gene09173:intron | 25.0% |
| !!! | ATAGAGCTATAATTTGTTTC+AGG | + | chr4.3:43652189-43652208 | MS.gene09173:intron | 25.0% |
| !!! | ATTATTTTACTGACCAAGAA+TGG | + | chr4.3:43649534-43649553 | MS.gene09173:CDS | 25.0% |
| !!! | ATTTTTTCTTTTTGGGTTTG+GGG | + | chr4.3:43647128-43647147 | MS.gene09173:intron | 25.0% |
| !!! | CAATTTTTTCTTTTTGGGTT+TGG | + | chr4.3:43647126-43647145 | MS.gene09173:intron | 25.0% |
| !!! | TCAGGTAATTTTAAAATGTG+TGG | + | chr4.3:43651139-43651158 | MS.gene09173:intron | 25.0% |
| !!! | TGGTGTTTTAAGTAATTTGT+AGG | + | chr4.3:43650112-43650131 | MS.gene09173:intron | 25.0% |
| !!! | TGTTCGCATTATTTTTCAAT+TGG | + | chr4.3:43649075-43649094 | MS.gene09173:intron | 25.0% |
| AAAATGAAATTCCAGTTTGG+GGG | + | chr4.3:43647688-43647707 | MS.gene09173:CDS | 30.0% | |
| AAAATTCACTGTTAGGACTT+AGG | + | chr4.3:43649920-43649939 | MS.gene09173:intron | 30.0% | |
| AAACATGTGTTTATAAGTGG+GGG | - | chr4.3:43650405-43650424 | None:intergenic | 30.0% | |
| AAACTTAAAGAGAAACCCAT+AGG | - | chr4.3:43648890-43648909 | None:intergenic | 30.0% | |
| AAATTGAAACTTGAAGGAGA+TGG | - | chr4.3:43646765-43646784 | None:intergenic | 30.0% | |
| AACACAAGTAAGTAAAAGCA+CGG | + | chr4.3:43648510-43648529 | MS.gene09173:intron | 30.0% | |
| AACACCAAAAATTCACTGTT+AGG | + | chr4.3:43649913-43649932 | MS.gene09173:intron | 30.0% | |
| AAGCTCTTAATATCAACCAT+AGG | + | chr4.3:43650915-43650934 | MS.gene09173:intron | 30.0% | |
| AAGTCCTTAATATCAACCAT+AGG | + | chr4.3:43650840-43650859 | MS.gene09173:intron | 30.0% | |
| ACTGTATATAAATGATGACC+TGG | + | chr4.3:43648727-43648746 | MS.gene09173:intron | 30.0% | |
| AGCACTAGTAAGAATTGTAA+AGG | + | chr4.3:43651201-43651220 | MS.gene09173:intron | 30.0% | |
| AGTCCTTAATATCAACCATA+GGG | + | chr4.3:43650841-43650860 | MS.gene09173:intron | 30.0% | |
| ATATTTAAAGAGTCCCACAT+CGG | - | chr4.3:43650442-43650461 | None:intergenic | 30.0% | |
| ATCCAAGAGAACAAGTATAA+GGG | - | chr4.3:43649651-43649670 | None:intergenic | 30.0% | |
| ATTATTAGCAAATGACCCAT+TGG | + | chr4.3:43650000-43650019 | MS.gene09173:intron | 30.0% | |
| ATTGTACATTCACTTAGTCT+TGG | + | chr4.3:43651978-43651997 | MS.gene09173:CDS | 30.0% | |
| CCAAAACATGTGTTTATAAG+TGG | - | chr4.3:43650408-43650427 | None:intergenic | 30.0% | |
| CGGTAAAAATTGAAACTTGA+AGG | - | chr4.3:43646771-43646790 | None:intergenic | 30.0% | |
| GAAAATGAAATTCCAGTTTG+GGG | + | chr4.3:43647687-43647706 | MS.gene09173:CDS | 30.0% | |
| GAAATGAGAAGAAAGTGATT+GGG | + | chr4.3:43647017-43647036 | MS.gene09173:intron | 30.0% | |
| GGAGATAATGTTTACATGTT+TGG | + | chr4.3:43651160-43651179 | MS.gene09173:intron | 30.0% | |
| TAATACCATCTTAGAAGTTG+TGG | + | chr4.3:43650332-43650351 | MS.gene09173:intron | 30.0% | |
| TAATGAACACTACAAAGAAC+AGG | + | chr4.3:43647421-43647440 | MS.gene09173:CDS | 30.0% | |
| TAATTGCATCAAGTGATTTG+AGG | - | chr4.3:43651927-43651946 | None:intergenic | 30.0% | |
| TCAATTCATCAGTGTGTTAA+AGG | + | chr4.3:43650649-43650668 | MS.gene09173:intron | 30.0% | |
| TCCATCAAAACAAGAAAGTA+TGG | - | chr4.3:43649775-43649794 | None:intergenic | 30.0% | |
| TCTTTAGATTCTAACAATGG+AGG | + | chr4.3:43649155-43649174 | MS.gene09173:intron | 30.0% | |
| TGAAATGAGAAGAAAGTGAT+TGG | + | chr4.3:43647016-43647035 | MS.gene09173:intron | 30.0% | |
| TTGTACCATCTTAGAATTTG+TGG | + | chr4.3:43650211-43650230 | MS.gene09173:intron | 30.0% | |
| TTTCAAATTGAATGTGTGTC+TGG | + | chr4.3:43646922-43646941 | MS.gene09173:intron | 30.0% | |
| TTTGTAGGTAGTTAATTAGG+TGG | + | chr4.3:43650092-43650111 | MS.gene09173:intron | 30.0% | |
| ! | AAACCCTAGATTCTAAAAAG+GGG | - | chr4.3:43646801-43646820 | None:intergenic | 30.0% |
| ! | AAGTCCTAACAGTGAATTTT+TGG | - | chr4.3:43649920-43649939 | None:intergenic | 30.0% |
| ! | ACAAGAAAGTATGGTTTGAT+AGG | - | chr4.3:43649766-43649785 | None:intergenic | 30.0% |
| ! | ACATTTATATCGTTTTCCTC+AGG | + | chr4.3:43651882-43651901 | MS.gene09173:intron | 30.0% |
| ! | ACTTATTTGAGTTTACCTAC+TGG | - | chr4.3:43648286-43648305 | None:intergenic | 30.0% |
| ! | AGATGGTACAAATTCTAAGA+TGG | - | chr4.3:43650202-43650221 | None:intergenic | 30.0% |
| ! | ATTAAGTTGTTTGCCCAAAA+AGG | - | chr4.3:43648071-43648090 | None:intergenic | 30.0% |
| ! | CCACTTATAAACACATGTTT+TGG | + | chr4.3:43650405-43650424 | MS.gene09173:intron | 30.0% |
| ! | GAAACCCTAGATTCTAAAAA+GGG | - | chr4.3:43646802-43646821 | None:intergenic | 30.0% |
| ! | GCATGTTGAAAGTATGATAT+TGG | + | chr4.3:43649354-43649373 | MS.gene09173:intron | 30.0% |
| ! | TGTATTTTCAAAAGCTCTTC+AGG | - | chr4.3:43648193-43648212 | None:intergenic | 30.0% |
| ! | TTAAGTTGTTTGCCCAAAAA+GGG | - | chr4.3:43648070-43648089 | None:intergenic | 30.0% |
| !! | AAGTCTTTTAGCTATGAAAG+CGG | - | chr4.3:43651006-43651025 | None:intergenic | 30.0% |
| !! | AGGGTGTTTTAAGTATTAGT+AGG | - | chr4.3:43650540-43650559 | None:intergenic | 30.0% |
| !! | GGGTGTTTTAAGTAATTTGT+AGG | + | chr4.3:43649956-43649975 | MS.gene09173:intron | 30.0% |
| !!! | ACCATACTTTCTTGTTTTGA+TGG | + | chr4.3:43649771-43649790 | MS.gene09173:CDS | 30.0% |
| !!! | TTTCCCCTTTTTAGAATCTA+GGG | + | chr4.3:43646795-43646814 | MS.gene09173:intron | 30.0% |
| !!! | TTTTCCCCTTTTTAGAATCT+AGG | + | chr4.3:43646794-43646813 | MS.gene09173:intron | 30.0% |
| AAATGAAATTCCAGTTTGGG+GGG | + | chr4.3:43647689-43647708 | MS.gene09173:CDS | 35.0% | |
| AAGAGTCATGTCACTAGTAA+GGG | + | chr4.3:43651532-43651551 | MS.gene09173:intron | 35.0% | |
| AAGTATGGTTTGATAGGCAA+TGG | - | chr4.3:43649760-43649779 | None:intergenic | 35.0% | |
| AAGTTACAACTTCCAAGATC+AGG | - | chr4.3:43647869-43647888 | None:intergenic | 35.0% | |
| ACACTGCTTATATACGCTAT+CGG | + | chr4.3:43648332-43648351 | MS.gene09173:intron | 35.0% | |
| ACCTATATGTGGAATGTTGT+CGG | + | chr4.3:43650726-43650745 | MS.gene09173:intron | 35.0% | |
| ACTCATGTTCATTCTTTACC+AGG | + | chr4.3:43648798-43648817 | MS.gene09173:intron | 35.0% | |
| AGTTGAGAAATGTCACAATC+AGG | + | chr4.3:43647550-43647569 | MS.gene09173:CDS | 35.0% | |
| ATACGATGATGAAGATCGTA+AGG | + | chr4.3:43647508-43647527 | MS.gene09173:CDS | 35.0% | |
| ATATTTACCATTGTGGTGAC+TGG | - | chr4.3:43651672-43651691 | None:intergenic | 35.0% | |
| ATGAACACTTGAGACTGTTT+GGG | - | chr4.3:43648262-43648281 | None:intergenic | 35.0% | |
| ATGAACTAATGTCACTGACA+CGG | - | chr4.3:43646968-43646987 | None:intergenic | 35.0% | |
| ATGAAGTTAAATGAAGGGTC+TGG | + | chr4.3:43649842-43649861 | MS.gene09173:intron | 35.0% | |
| ATTAGAGATAGTCTCATCTC+AGG | + | chr4.3:43651121-43651140 | MS.gene09173:intron | 35.0% | |
| ATTGTCTTCAACAGAGTTGT+CGG | - | chr4.3:43652022-43652041 | None:intergenic | 35.0% | |
| ATTTATGTGAACCAGGAAGA+AGG | + | chr4.3:43647376-43647395 | MS.gene09173:intron | 35.0% | |
| CAATTCCTATCAACAAGAAG+AGG | + | chr4.3:43646729-43646748 | MS.gene09173:CDS | 35.0% | |
| CTTAAAACACCCTTTGTGTT+TGG | - | chr4.3:43650069-43650088 | None:intergenic | 35.0% | |
| CTTCTCAAATCTTTGTACTC+AGG | - | chr4.3:43648856-43648875 | None:intergenic | 35.0% | |
| CTTGTAACTCGAAATCCAAA+GGG | - | chr4.3:43646694-43646713 | None:intergenic | 35.0% | |
| GAAAAGAACAGAACATCTCA+TGG | - | chr4.3:43652053-43652072 | None:intergenic | 35.0% | |
| GAAAAGAATTCCATTCACCT+CGG | - | chr4.3:43652127-43652146 | None:intergenic | 35.0% | |
| GAACAACAGACTAAATTCTG+TGG | + | chr4.3:43647904-43647923 | MS.gene09173:CDS | 35.0% | |
| GAATAAGCAGGCAAAGAAAA+AGG | + | chr4.3:43647463-43647482 | MS.gene09173:CDS | 35.0% | |
| GAATACCTCTTCTTGTTGAT+AGG | - | chr4.3:43646737-43646756 | None:intergenic | 35.0% | |
| GATCCAAGAGAACAAGTATA+AGG | - | chr4.3:43649652-43649671 | None:intergenic | 35.0% | |
| GTCACCACAATGGTAAATAT+CGG | + | chr4.3:43651672-43651691 | MS.gene09173:intron | 35.0% | |
| GTGTGTTAAAGGAAGTTGTT+AGG | + | chr4.3:43650660-43650679 | MS.gene09173:intron | 35.0% | |
| TACCTCTTGATTCTAATCAC+AGG | + | chr4.3:43649384-43649403 | MS.gene09173:intron | 35.0% | |
| TCAGTAGTTCTCTGTGTATA+CGG | + | chr4.3:43647754-43647773 | MS.gene09173:intron | 35.0% | |
| TCCAAACATGCTGTTATATC+AGG | + | chr4.3:43648309-43648328 | MS.gene09173:intron | 35.0% | |
| TCCTGATATAACAGCATGTT+TGG | - | chr4.3:43648313-43648332 | None:intergenic | 35.0% | |
| TCTGCCATAATCCATTATGA+CGG | + | chr4.3:43651712-43651731 | MS.gene09173:intron | 35.0% | |
| TCTTGTAACTCGAAATCCAA+AGG | - | chr4.3:43646695-43646714 | None:intergenic | 35.0% | |
| TGACAGAAAATTGATCAACC+TGG | - | chr4.3:43648819-43648838 | None:intergenic | 35.0% | |
| TTACATGTTTGGATAAGACC+TGG | + | chr4.3:43651171-43651190 | MS.gene09173:intron | 35.0% | |
| TTCCCTTATACTTGTTCTCT+TGG | + | chr4.3:43649646-43649665 | MS.gene09173:intron | 35.0% | |
| ! | AATTCTCTCTTCTGGAAATG+AGG | + | chr4.3:43648668-43648687 | MS.gene09173:CDS | 35.0% |
| ! | ATCTGAAATGTGTTTCTGCT+CGG | + | chr4.3:43651494-43651513 | MS.gene09173:intron | 35.0% |
| ! | CACAACCACAAATTCTAAGA+TGG | - | chr4.3:43650046-43650065 | None:intergenic | 35.0% |
| ! | CTCTTCTTGTTGATAGGAAT+TGG | - | chr4.3:43646731-43646750 | None:intergenic | 35.0% |
| ! | GAACCCTATGGTTGATATTA+AGG | - | chr4.3:43650847-43650866 | None:intergenic | 35.0% |
| ! | GGAAACCCTAGATTCTAAAA+AGG | - | chr4.3:43646803-43646822 | None:intergenic | 35.0% |
| ! | TAGAAGCACAGTAGTAGATA+TGG | - | chr4.3:43649116-43649135 | None:intergenic | 35.0% |
| ! | TGAGAAACCTGTAGCTTTTT+GGG | + | chr4.3:43648482-43648501 | MS.gene09173:CDS | 35.0% |
| ! | TTGAGAAACCTGTAGCTTTT+TGG | + | chr4.3:43648481-43648500 | MS.gene09173:CDS | 35.0% |
| !! | ACTTAGTCTTGGCAAAGAAT+TGG | + | chr4.3:43651989-43652008 | MS.gene09173:CDS | 35.0% |
| !! | AGTCCATTACTTTGAGATTG+AGG | + | chr4.3:43651226-43651245 | MS.gene09173:intron | 35.0% |
| !! | ATCCAGGCTCTAATATTTTG+GGG | - | chr4.3:43649185-43649204 | None:intergenic | 35.0% |
| !! | GATCCAGGCTCTAATATTTT+GGG | - | chr4.3:43649186-43649205 | None:intergenic | 35.0% |
| !! | GTCCATTACTTTGAGATTGA+GGG | + | chr4.3:43651227-43651246 | MS.gene09173:intron | 35.0% |
| !! | TAGGTCAGTTGGTGAAATTA+AGG | - | chr4.3:43652091-43652110 | None:intergenic | 35.0% |
| !! | TCCATTACTTTGAGATTGAG+GGG | + | chr4.3:43651228-43651247 | MS.gene09173:intron | 35.0% |
| !! | TGATCCAGGCTCTAATATTT+TGG | - | chr4.3:43649187-43649206 | None:intergenic | 35.0% |
| !! | TTTGTTTCAGGTTCGTCATA+AGG | + | chr4.3:43652201-43652220 | MS.gene09173:intron | 35.0% |
| AAGCTACAGGTTTCTCAACA+TGG | - | chr4.3:43648479-43648498 | None:intergenic | 40.0% | |
| AAGGGTTACTAGTCAATGGT+TGG | + | chr4.3:43648427-43648446 | MS.gene09173:CDS | 40.0% | |
| AATTTCACACCAAAAGTCGC+TGG | - | chr4.3:43648652-43648671 | None:intergenic | 40.0% | |
| ACTAAATTCTGTGGTCGAGT+TGG | + | chr4.3:43647913-43647932 | MS.gene09173:CDS | 40.0% | |
| ACTTAGGACTCAGTATGAGA+GGG | + | chr4.3:43649936-43649955 | MS.gene09173:intron | 40.0% | |
| ACTTGATACTGTGTCCTTTC+AGG | + | chr4.3:43648390-43648409 | MS.gene09173:intron | 40.0% | |
| ATCATAGCAACCTTTGTCTG+CGG | - | chr4.3:43647939-43647958 | None:intergenic | 40.0% | |
| CAAGAAAGCTATCTCCTGAA+AGG | - | chr4.3:43648407-43648426 | None:intergenic | 40.0% | |
| CAAGAGTCATGTCACTAGTA+AGG | + | chr4.3:43651531-43651550 | MS.gene09173:intron | 40.0% | |
| CAGGAGATAGCTTTCTTGAA+GGG | + | chr4.3:43648409-43648428 | MS.gene09173:intron | 40.0% | |
| CATGAACACTTGAGACTGTT+TGG | - | chr4.3:43648263-43648282 | None:intergenic | 40.0% | |
| CTAACACAACCTCACAAAAC+CGG | + | chr4.3:43650361-43650380 | MS.gene09173:intron | 40.0% | |
| CTCCTGTGATTAGAATCAAG+AGG | - | chr4.3:43649389-43649408 | None:intergenic | 40.0% | |
| CTGAAACACATTCAACAGTC+CGG | - | chr4.3:43649704-43649723 | None:intergenic | 40.0% | |
| CTTACTAGTGACATGACTCT+TGG | - | chr4.3:43651533-43651552 | None:intergenic | 40.0% | |
| CTTATCCAGTTGAAAGCCTT+TGG | + | chr4.3:43647660-43647679 | MS.gene09173:intron | 40.0% | |
| CTTGAAGGGTTACTAGTCAA+TGG | + | chr4.3:43648423-43648442 | MS.gene09173:CDS | 40.0% | |
| GAACCAGGAAGAAGGTTATT+GGG | + | chr4.3:43647384-43647403 | MS.gene09173:intron | 40.0% | |
| GAGAATCCAAAGAGCGAAAA+AGG | + | chr4.3:43651412-43651431 | MS.gene09173:intron | 40.0% | |
| GCAATTAAATTTGGCGTGTG+TGG | - | chr4.3:43651785-43651804 | None:intergenic | 40.0% | |
| GTAAATATCGGCCGATATTG+CGG | + | chr4.3:43651684-43651703 | MS.gene09173:intron | 40.0% | |
| GTAAGGAAGCTCACTTGAAT+AGG | + | chr4.3:43647525-43647544 | MS.gene09173:CDS | 40.0% | |
| GTAAGTGACAAATCTGATCC+AGG | - | chr4.3:43649201-43649220 | None:intergenic | 40.0% | |
| TAAAGTCTTCTCTCACACGA+TGG | - | chr4.3:43651369-43651388 | None:intergenic | 40.0% | |
| TAAATATCGGCCGATATTGC+GGG | + | chr4.3:43651685-43651704 | MS.gene09173:intron | 40.0% | |
| TAGAAAACCAGTCACCACAA+TGG | + | chr4.3:43651662-43651681 | MS.gene09173:intron | 40.0% | |
| TAGCGAAATTCATTGCTTGC+AGG | + | chr4.3:43649576-43649595 | MS.gene09173:CDS | 40.0% | |
| TCAGGAGATAGCTTTCTTGA+AGG | + | chr4.3:43648408-43648427 | MS.gene09173:intron | 40.0% | |
| TCCCCTCAATCTCAAAGTAA+TGG | - | chr4.3:43651232-43651251 | None:intergenic | 40.0% | |
| TGAACCAGGAAGAAGGTTAT+TGG | + | chr4.3:43647383-43647402 | MS.gene09173:intron | 40.0% | |
| TGAGAATGGATGTTAGGACT+TGG | - | chr4.3:43650569-43650588 | None:intergenic | 40.0% | |
| TGATAGGAATTGGTACGAGA+AGG | - | chr4.3:43646721-43646740 | None:intergenic | 40.0% | |
| TGCTTCTCGAAAAGCTTGTA+TGG | - | chr4.3:43647076-43647095 | None:intergenic | 40.0% | |
| TGGTGTGAAATTCTCTCTTC+TGG | + | chr4.3:43648660-43648679 | MS.gene09173:CDS | 40.0% | |
| TTAAAGGCCCAAAAAGCTAC+AGG | - | chr4.3:43648492-43648511 | None:intergenic | 40.0% | |
| TTCGCTCTTTGGATTCTCTA+AGG | - | chr4.3:43651410-43651429 | None:intergenic | 40.0% | |
| TTGAAACTTGAAGGAGATGG+TGG | - | chr4.3:43646762-43646781 | None:intergenic | 40.0% | |
| ! | AAAAAGGTGTGTTCACTGCA+AGG | + | chr4.3:43651428-43651447 | MS.gene09173:intron | 40.0% |
| ! | AAGTGGAGGGTGTGTTTATT+AGG | + | chr4.3:43651454-43651473 | MS.gene09173:intron | 40.0% |
| ! | ATGTTAGGACTTGGTATGAG+AGG | - | chr4.3:43650560-43650579 | None:intergenic | 40.0% |
| ! | CACAACCACAACTTCTAAGA+TGG | - | chr4.3:43650340-43650359 | None:intergenic | 40.0% |
| ! | GATTTGTCACTTACTGTTGC+CGG | + | chr4.3:43649207-43649226 | MS.gene09173:CDS | 40.0% |
| ! | GGTGCTTTTATATGACTGCT+TGG | + | chr4.3:43649499-43649518 | MS.gene09173:CDS | 40.0% |
| ! | GGTGTTGAAATAAACATGCC+AGG | - | chr4.3:43648748-43648767 | None:intergenic | 40.0% |
| ! | TGTTAGGACTTGGTATGAGA+GGG | - | chr4.3:43650559-43650578 | None:intergenic | 40.0% |
| ! | TTTAAAGCAAGAGGCCCATT+AGG | - | chr4.3:43650495-43650514 | None:intergenic | 40.0% |
| !! | AACACACCTTTTTCGCTCTT+TGG | - | chr4.3:43651421-43651440 | None:intergenic | 40.0% |
| !! | TTACTAGTGCTTGCTTTTCC+AGG | - | chr4.3:43651192-43651211 | None:intergenic | 40.0% |
| !!! | GGTAGAAGTTTTTGGTGAAC+AGG | + | chr4.3:43647710-43647729 | MS.gene09173:CDS | 40.0% |
| AAAACTTCTACCCCCCAAAC+TGG | - | chr4.3:43647702-43647721 | None:intergenic | 45.0% | |
| AAAAGTCGCTGGAAGAGTTC+TGG | - | chr4.3:43648641-43648660 | None:intergenic | 45.0% | |
| AAGATCAGGAAAGTCCAGAG+GGG | - | chr4.3:43647855-43647874 | None:intergenic | 45.0% | |
| AATCTCATCCTCTTCCTTGC+TGG | - | chr4.3:43651563-43651582 | None:intergenic | 45.0% | |
| ACACGATGGAGTTGACTACA+GGG | - | chr4.3:43651355-43651374 | None:intergenic | 45.0% | |
| ACCATAGGATTCAAGCACAG+TGG | + | chr4.3:43650930-43650949 | MS.gene09173:intron | 45.0% | |
| CAACCCAATAACCTTCTTCC+TGG | - | chr4.3:43647390-43647409 | None:intergenic | 45.0% | |
| CAAGATCAGGAAAGTCCAGA+GGG | - | chr4.3:43647856-43647875 | None:intergenic | 45.0% | |
| CACCCCAAAATATTAGAGCC+TGG | + | chr4.3:43649180-43649199 | MS.gene09173:CDS | 45.0% | |
| CAGGAAGAAGGTTATTGGGT+TGG | + | chr4.3:43647388-43647407 | MS.gene09173:intron | 45.0% | |
| CGGAGGATTTGAATTGCATC+CGG | + | chr4.3:43649682-43649701 | MS.gene09173:CDS | 45.0% | |
| CTTCTCCAAAGGCTTTCAAC+TGG | - | chr4.3:43647668-43647687 | None:intergenic | 45.0% | |
| GACTTAGGACTCAGTATGAG+AGG | + | chr4.3:43649935-43649954 | MS.gene09173:intron | 45.0% | |
| GCAAATGACCCATTGGATCT+TGG | + | chr4.3:43650007-43650026 | MS.gene09173:intron | 45.0% | |
| GCAGGCAAAGAAAAAGGCTA+AGG | + | chr4.3:43647469-43647488 | MS.gene09173:CDS | 45.0% | |
| GCATAAGATCGTAGGTCAGT+TGG | - | chr4.3:43652102-43652121 | None:intergenic | 45.0% | |
| GCCCAAAAAGGGCTTACATA+CGG | - | chr4.3:43648059-43648078 | None:intergenic | 45.0% | |
| GCCGACAACATTCCACATAT+AGG | - | chr4.3:43650730-43650749 | None:intergenic | 45.0% | |
| GGCAGAAAAACCCGCAATAT+CGG | - | chr4.3:43651698-43651717 | None:intergenic | 45.0% | |
| GTGGTTGTGCCAAACACAAA+GGG | + | chr4.3:43650057-43650076 | MS.gene09173:intron | 45.0% | |
| TACAGGTTTCTCAACATGGC+AGG | - | chr4.3:43648475-43648494 | None:intergenic | 45.0% | |
| TAGTAAGGGAGAAACCAGCA+AGG | + | chr4.3:43651546-43651565 | MS.gene09173:intron | 45.0% | |
| TATGTCTGTTCCTAGATCGC+CGG | + | chr4.3:43649462-43649481 | MS.gene09173:CDS | 45.0% | |
| TCACTTACTGTTGCCGGATA+AGG | + | chr4.3:43649213-43649232 | MS.gene09173:CDS | 45.0% | |
| TCCACTGTGCTTGAATCCTA+TGG | - | chr4.3:43650934-43650953 | None:intergenic | 45.0% | |
| TCGGCCGATATTTACCATTG+TGG | - | chr4.3:43651679-43651698 | None:intergenic | 45.0% | |
| TCTCAAGTGTTCATGCCAGT+AGG | + | chr4.3:43648268-43648287 | MS.gene09173:intron | 45.0% | |
| TGACCCATTGGATCTTAGAG+AGG | + | chr4.3:43650306-43650325 | MS.gene09173:intron | 45.0% | |
| TGCAGAGAAGCAGAATAAGC+AGG | + | chr4.3:43647451-43647470 | MS.gene09173:CDS | 45.0% | |
| TGTATGTGTCAGTGCTTCGT+AGG | + | chr4.3:43647335-43647354 | MS.gene09173:intron | 45.0% | |
| TGTGGTTGTGCCAAACACAA+AGG | + | chr4.3:43650056-43650075 | MS.gene09173:intron | 45.0% | |
| TGTTCACTGCAAGGATCAAG+TGG | + | chr4.3:43651437-43651456 | MS.gene09173:intron | 45.0% | |
| ! | AGAACTCTTCCAGCGACTTT+TGG | + | chr4.3:43648640-43648659 | MS.gene09173:CDS | 45.0% |
| ! | AGCCGTATGTAAGCCCTTTT+TGG | + | chr4.3:43648054-43648073 | MS.gene09173:intron | 45.0% |
| ! | CAGAAGTTAGTTCTCGTTGC+AGG | + | chr4.3:43649721-43649740 | MS.gene09173:CDS | 45.0% |
| ! | GAAGTGCTCTTGACACCTAT+GGG | + | chr4.3:43648872-43648891 | MS.gene09173:CDS | 45.0% |
| ! | GCCGTATGTAAGCCCTTTTT+GGG | + | chr4.3:43648055-43648074 | MS.gene09173:intron | 45.0% |
| ! | GTTTGGGGGGTAGAAGTTTT+TGG | + | chr4.3:43647702-43647721 | MS.gene09173:CDS | 45.0% |
| !! | AGAAGTGCTCTTGACACCTA+TGG | + | chr4.3:43648871-43648890 | MS.gene09173:CDS | 45.0% |
| !! | AGAGCCTCTCTAAGATCCAA+TGG | - | chr4.3:43650313-43650332 | None:intergenic | 45.0% |
| !! | CAGGCTCTAATATTTTGGGG+TGG | - | chr4.3:43649182-43649201 | None:intergenic | 45.0% |
| !! | CGGTTTTGTGAGGTTGTGTT+AGG | - | chr4.3:43650363-43650382 | None:intergenic | 45.0% |
| !! | GAGCCTCTCTAAGATCCAAT+GGG | - | chr4.3:43650312-43650331 | None:intergenic | 45.0% |
| AATTTGGCGTGTGTGGTCCA+TGG | - | chr4.3:43651778-43651797 | None:intergenic | 50.0% | |
| ACCATAGGGTTCAAGCACAG+TGG | + | chr4.3:43650855-43650874 | MS.gene09173:intron | 50.0% | |
| AGAGCCTCTCCAAGATCCAA+TGG | - | chr4.3:43650019-43650038 | None:intergenic | 50.0% | |
| AGATCAGGAAAGTCCAGAGG+GGG | - | chr4.3:43647854-43647873 | None:intergenic | 50.0% | |
| AGTGCTGCGCATGAAAGTTC+AGG | + | chr4.3:43648916-43648935 | MS.gene09173:CDS | 50.0% | |
| CACACGATGGAGTTGACTAC+AGG | - | chr4.3:43651356-43651375 | None:intergenic | 50.0% | |
| CACTGCAAGGATCAAGTGGA+GGG | + | chr4.3:43651441-43651460 | MS.gene09173:intron | 50.0% | |
| CACTTGAGACTGTTTGGGAG+AGG | - | chr4.3:43648257-43648276 | None:intergenic | 50.0% | |
| CCAAGATCAGGAAAGTCCAG+AGG | - | chr4.3:43647857-43647876 | None:intergenic | 50.0% | |
| CCTCTGGACTTTCCTGATCT+TGG | + | chr4.3:43647854-43647873 | MS.gene09173:CDS | 50.0% | |
| CTCTTGGATCTGCAGAGTCT+CGG | + | chr4.3:43649662-43649681 | MS.gene09173:intron | 50.0% | |
| CTGTTGCCGGATAAGGTAAG+CGG | + | chr4.3:43649220-43649239 | MS.gene09173:intron | 50.0% | |
| GAGCCTCTCCAAGATCCAAT+GGG | - | chr4.3:43650018-43650037 | None:intergenic | 50.0% | |
| GAGGATCTCTTCTCCATTGC+TGG | - | chr4.3:43651908-43651927 | None:intergenic | 50.0% | |
| GCAATCCTTACCTCACAAGC+CGG | - | chr4.3:43650383-43650402 | None:intergenic | 50.0% | |
| GTCCCACATCGGACAAAAGA+TGG | - | chr4.3:43650431-43650450 | None:intergenic | 50.0% | |
| GTTCTCGTTGCAGGCAACTT+AGG | + | chr4.3:43649730-43649749 | MS.gene09173:CDS | 50.0% | |
| GTTTCTCAACATGGCAGGAC+AGG | - | chr4.3:43648470-43648489 | None:intergenic | 50.0% | |
| TCACTGCAAGGATCAAGTGG+AGG | + | chr4.3:43651440-43651459 | MS.gene09173:intron | 50.0% | |
| TCCACTGTGCTTGAACCCTA+TGG | - | chr4.3:43650859-43650878 | None:intergenic | 50.0% | |
| TCTTATGCGTCCGAGGTGAA+TGG | + | chr4.3:43652114-43652133 | MS.gene09173:intron | 50.0% | |
| TGAACTTTCATGCGCAGCAC+TGG | - | chr4.3:43648917-43648936 | None:intergenic | 50.0% | |
| TGACCCATTGGATCTTGGAG+AGG | + | chr4.3:43650012-43650031 | MS.gene09173:intron | 50.0% | |
| TTGAGATTGAGGGGAGATCG+AGG | + | chr4.3:43651237-43651256 | MS.gene09173:intron | 50.0% | |
| ! | GGCCATCTTTTGTCCGATGT+GGG | + | chr4.3:43650426-43650445 | MS.gene09173:intron | 50.0% |
| ! | TGGCCATCTTTTGTCCGATG+TGG | + | chr4.3:43650425-43650444 | MS.gene09173:intron | 50.0% |
| !! | CAAAACCGGCTTGTGAGGTA+AGG | + | chr4.3:43650375-43650394 | MS.gene09173:intron | 50.0% |
| !! | GGCGCCGTCATAATGGATTA+TGG | - | chr4.3:43651719-43651738 | None:intergenic | 50.0% |
| !! | TTCCTAGATCGCCGGTTTCA+GGG | + | chr4.3:43649470-43649489 | MS.gene09173:CDS | 50.0% |
| AGGAAAGTCCAGAGGGGGAA+AGG | - | chr4.3:43647849-43647868 | None:intergenic | 55.0% | |
| CCTACGATCTTATGCGTCCG+AGG | + | chr4.3:43652107-43652126 | MS.gene09173:CDS | 55.0% | |
| CCTCGGACGCATAAGATCGT+AGG | - | chr4.3:43652110-43652129 | None:intergenic | 55.0% | |
| GCACCAACAACCCCTGAAAC+CGG | - | chr4.3:43649484-43649503 | None:intergenic | 55.0% | |
| GCTTTGTGGCGCCGTCATAA+TGG | - | chr4.3:43651726-43651745 | None:intergenic | 55.0% | |
| GGAAAGTCCAGAGGGGGAAA+GGG | - | chr4.3:43647848-43647867 | None:intergenic | 55.0% | |
| GGGAGAAACCAGCAAGGAAG+AGG | + | chr4.3:43651552-43651571 | MS.gene09173:intron | 55.0% | |
| GGGGAGATCGAGGAAACTAC+AGG | + | chr4.3:43651247-43651266 | MS.gene09173:intron | 55.0% | |
| TGCAGCTCGAGCACCATTCT+TGG | - | chr4.3:43649550-43649569 | None:intergenic | 55.0% | |
| TTGGATCTGCAGAGTCTCGG+AGG | + | chr4.3:43649665-43649684 | MS.gene09173:intron | 55.0% | |
| ! | CGTTTTCCTCAGGCCAGCAA+TGG | + | chr4.3:43651892-43651911 | MS.gene09173:intron | 55.0% |
| ! | GTGCTGCCGCTTACCTTATC+CGG | - | chr4.3:43649229-43649248 | None:intergenic | 55.0% |
| ! | TCTTCTCCATTGCTGGCCTG+AGG | - | chr4.3:43651901-43651920 | None:intergenic | 55.0% |
| !! | CCTCACAAAACCGGCTTGTG+AGG | + | chr4.3:43650370-43650389 | MS.gene09173:intron | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+AGG | - | chr4.3:43650373-43650392 | None:intergenic | 55.0% |
| !! | GTTCCTAGATCGCCGGTTTC+AGG | + | chr4.3:43649469-43649488 | MS.gene09173:CDS | 55.0% |
| !! | TCCTAGATCGCCGGTTTCAG+GGG | + | chr4.3:43649471-43649490 | MS.gene09173:CDS | 55.0% |
| ACCCCTGAAACCGGCGATCT+AGG | - | chr4.3:43649475-43649494 | None:intergenic | 60.0% | |
| GAGCCAAAATCCCGCCATGC+CGG | - | chr4.3:43651751-43651770 | None:intergenic | 60.0% | |
| GCAGAAACCCTTTCCCCCTC+TGG | + | chr4.3:43647838-43647857 | MS.gene09173:intron | 60.0% | |
| TTGGCGTGTGTGGTCCATGG+CGG | - | chr4.3:43651775-43651794 | None:intergenic | 60.0% | |
| !! | GTCGAGTTGGCCGCAGACAA+AGG | + | chr4.3:43647926-43647945 | MS.gene09173:CDS | 60.0% |
| !! | TCGCCGGTTTCAGGGGTTGT+TGG | + | chr4.3:43649478-43649497 | MS.gene09173:CDS | 60.0% |
| !!! | GGGATTTTGGCTCTCCGCCA+TGG | + | chr4.3:43651758-43651777 | MS.gene09173:intron | 60.0% |
| CACAAAGCTGCCGGCATGGC+GGG | + | chr4.3:43651738-43651757 | MS.gene09173:intron | 65.0% | |
| CCACAAAGCTGCCGGCATGG+CGG | + | chr4.3:43651737-43651756 | MS.gene09173:intron | 65.0% | |
| TGACGGCGCCACAAAGCTGC+CGG | + | chr4.3:43651729-43651748 | MS.gene09173:intron | 65.0% | |
| !! | CTGCCGGCATGGCGGGATTT+TGG | + | chr4.3:43651745-43651764 | MS.gene09173:intron | 65.0% |
| CCGCCATGCCGGCAGCTTTG+TGG | - | chr4.3:43651740-43651759 | None:intergenic | 70.0% | |
| GCGCCACAAAGCTGCCGGCA+TGG | + | chr4.3:43651734-43651753 | MS.gene09173:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 43646683 | 43652252 | 43646683 | ID=MS.gene09173 |
| chr4.3 | mRNA | 43646683 | 43652252 | 43646683 | ID=MS.gene09173.t1;Parent=MS.gene09173 |
| chr4.3 | exon | 43646683 | 43646750 | 43646683 | ID=MS.gene09173.t1.exon1;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43646683 | 43646750 | 43646683 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43647391 | 43647571 | 43647391 | ID=MS.gene09173.t1.exon2;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43647391 | 43647571 | 43647391 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43647669 | 43647731 | 43647669 | ID=MS.gene09173.t1.exon3;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43647669 | 43647731 | 43647669 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43647842 | 43647947 | 43647842 | ID=MS.gene09173.t1.exon4;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43647842 | 43647947 | 43647842 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43648412 | 43648516 | 43648412 | ID=MS.gene09173.t1.exon5;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43648412 | 43648516 | 43648412 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43648613 | 43648689 | 43648613 | ID=MS.gene09173.t1.exon6;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43648613 | 43648689 | 43648613 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43648820 | 43648937 | 43648820 | ID=MS.gene09173.t1.exon7;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43648820 | 43648937 | 43648820 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43649162 | 43649234 | 43649162 | ID=MS.gene09173.t1.exon8;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43649162 | 43649234 | 43649162 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43649406 | 43649597 | 43649406 | ID=MS.gene09173.t1.exon9;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43649406 | 43649597 | 43649406 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43649677 | 43649794 | 43649677 | ID=MS.gene09173.t1.exon10;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43649677 | 43649794 | 43649677 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43651904 | 43652128 | 43651904 | ID=MS.gene09173.t1.exon11;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43651904 | 43652128 | 43651904 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| chr4.3 | exon | 43652211 | 43652252 | 43652211 | ID=MS.gene09173.t1.exon12;Parent=MS.gene09173.t1 |
| chr4.3 | CDS | 43652211 | 43652252 | 43652211 | ID=cds.MS.gene09173.t1;Parent=MS.gene09173.t1 |
| Gene Sequence |
| Protein sequence |
