Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057320.t1 | XP_003600861.1 | 99.7 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 8.20E-167 | 596.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057320.t1 | O24412 | 89.0 | 308 | 34 | 0 | 1 | 308 | 1 | 308 | 5.2e-154 | 545.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057320.t1 | G7JB60 | 99.7 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 5.9e-167 | 596.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051975 | MS.gene057320 | 0.8119 | 5.55E-51 | -1.69E-46 |
| MS.gene057320 | MS.gene06740 | 0.823372 | 1.44E-53 | -1.69E-46 |
| MS.gene057320 | MS.gene06912 | 0.80522 | 1.48E-49 | -1.69E-46 |
| MS.gene057320 | MS.gene06958 | 0.820806 | 5.65E-53 | -1.69E-46 |
| MS.gene057320 | MS.gene072740 | 0.817482 | 3.22E-52 | -1.69E-46 |
| MS.gene057320 | MS.gene09173 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene057320 | MS.gene20886 | 0.801091 | 1.06E-48 | -1.69E-46 |
| MS.gene057320 | MS.gene21651 | 0.814879 | 1.23E-51 | -1.69E-46 |
| MS.gene057320 | MS.gene22321 | 0.811865 | 5.65E-51 | -1.69E-46 |
| MS.gene057320 | MS.gene23677 | 0.834935 | 2.25E-56 | -1.69E-46 |
| MS.gene057320 | MS.gene24375 | 0.811778 | 5.91E-51 | -1.69E-46 |
| MS.gene057320 | MS.gene24932 | 0.803948 | 2.73E-49 | -1.69E-46 |
| MS.gene057320 | MS.gene35034 | 0.822252 | 2.62E-53 | -1.69E-46 |
| MS.gene057320 | MS.gene44230 | 0.834865 | 2.34E-56 | -1.69E-46 |
| MS.gene057320 | MS.gene53070 | 0.819006 | 1.46E-52 | -1.69E-46 |
| MS.gene057320 | MS.gene58134 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene057320 | MS.gene66975 | 0.812279 | 4.59E-51 | -1.69E-46 |
| MS.gene057320 | MS.gene71202 | 0.805056 | 1.60E-49 | -1.69E-46 |
| MS.gene057320 | MS.gene76635 | 0.818823 | 1.60E-52 | -1.69E-46 |
| MS.gene057320 | MS.gene79209 | 0.806939 | 6.45E-50 | -1.69E-46 |
| MS.gene057320 | MS.gene85246 | 0.815056 | 1.12E-51 | -1.69E-46 |
| MS.gene057320 | MS.gene87972 | 0.801282 | 9.69E-49 | -1.69E-46 |
| MS.gene057320 | MS.gene91416 | 0.801229 | 9.94E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057320.t1 | MTR_3g070180 | 99.676 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 0.0 | 624 |
| MS.gene057320.t1 | MTR_5g081980 | 95.146 | 309 | 15 | 0 | 1 | 309 | 1 | 309 | 0.0 | 600 |
| MS.gene057320.t1 | MTR_3g070190 | 33.210 | 271 | 164 | 6 | 19 | 285 | 25 | 282 | 2.74e-35 | 129 |
| MS.gene057320.t1 | MTR_5g082000 | 31.206 | 282 | 177 | 6 | 8 | 285 | 10 | 278 | 1.15e-31 | 119 |
| MS.gene057320.t1 | MTR_3g009270 | 25.574 | 305 | 189 | 6 | 10 | 285 | 4 | 299 | 9.93e-23 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057320.t1 | AT5G05780 | 88.961 | 308 | 34 | 0 | 1 | 308 | 1 | 308 | 0.0 | 572 |
| MS.gene057320.t1 | AT3G11270 | 88.852 | 305 | 34 | 0 | 1 | 305 | 1 | 305 | 0.0 | 566 |
| MS.gene057320.t1 | AT5G05780 | 87.987 | 308 | 34 | 1 | 1 | 308 | 1 | 305 | 0.0 | 561 |
| MS.gene057320.t1 | AT3G11270 | 87.869 | 305 | 34 | 1 | 1 | 305 | 1 | 302 | 0.0 | 554 |
| MS.gene057320.t1 | AT2G39990 | 28.807 | 243 | 156 | 6 | 10 | 248 | 21 | 250 | 5.00e-26 | 105 |
| MS.gene057320.t1 | AT4G26430 | 24.606 | 317 | 200 | 7 | 10 | 296 | 4 | 311 | 5.06e-22 | 94.4 |
| MS.gene057320.t1 | AT5G56280 | 23.885 | 314 | 200 | 7 | 10 | 295 | 4 | 306 | 6.27e-21 | 91.7 |
Find 73 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTGATCTTGTTATTGA+TGG | 0.232829 | 3.1:-57533933 | MS.gene057320:CDS |
| GTATAGGATCTCATGGTTTA+AGG | 0.233509 | 3.1:+57533902 | None:intergenic |
| ATTATAACCAAAACGGGATT+TGG | 0.243791 | 3.1:+57534672 | None:intergenic |
| TCCATGTTTAAGAGAATAAA+TGG | 0.261453 | 3.1:-57535148 | MS.gene057320:intron |
| AACACGCTTGCGAGTATCTT+TGG | 0.301893 | 3.1:+57537198 | None:intergenic |
| GCTCATGAGGTTGAGGAAAT+AGG | 0.315086 | 3.1:-57534385 | MS.gene057320:intron |
| GCACATGCACAAAGACCTTT+TGG | 0.348447 | 3.1:+57534422 | None:intergenic |
| CTATGTTCCAAATCCCGTTT+TGG | 0.360839 | 3.1:-57534679 | MS.gene057320:CDS |
| GTTGGAATTCCCAACTCCTT+AGG | 0.364240 | 3.1:+57534639 | None:intergenic |
| CTCGGTTGCAAGGGTGCTAA+TGG | 0.377226 | 3.1:+57534185 | None:intergenic |
| TCTTGCATCCAAACCTTTCA+AGG | 0.385551 | 3.1:+57533974 | None:intergenic |
| ATCCGAACCAGCGTAGCTAT+TGG | 0.391771 | 3.1:+57537129 | None:intergenic |
| ACATCAATTATAACCAAAAC+GGG | 0.396892 | 3.1:+57534666 | None:intergenic |
| GATACTCGCAAGCGTGTTGT+CGG | 0.410026 | 3.1:-57537193 | MS.gene057320:CDS |
| AGATCAGAGACATTGAGATT+TGG | 0.417947 | 3.1:+57533631 | None:intergenic |
| ACTCACGGCCTTGAAAGGTT+TGG | 0.421231 | 3.1:-57533982 | MS.gene057320:CDS |
| ATGACAAGGACCCTAGCATT+TGG | 0.429351 | 3.1:-57535204 | MS.gene057320:CDS |
| GCTGCACTTGGTACTGGTGC+TGG | 0.431498 | 3.1:+57533239 | None:intergenic |
| AACATCAATTATAACCAAAA+CGG | 0.431934 | 3.1:+57534665 | None:intergenic |
| AGACATTGAGATTTGGTAGC+AGG | 0.443560 | 3.1:+57533638 | None:intergenic |
| TCCTTGTCATCTTCTTCAAA+AGG | 0.445298 | 3.1:+57535217 | None:intergenic |
| GAAAATGACCTCGACATTCA+TGG | 0.450178 | 3.1:-57535001 | MS.gene057320:CDS |
| CAGGAGTGGAACACTTGCTC+AGG | 0.452480 | 3.1:-57534224 | MS.gene057320:CDS |
| GATGTTGAACCTAAGGAGTT+GGG | 0.454883 | 3.1:-57534648 | MS.gene057320:CDS |
| TTGCTTGGTTCTACTTTCAA+AGG | 0.455683 | 3.1:-57537166 | MS.gene057320:CDS |
| GTACCAAGTGCAGCTGCATA+AGG | 0.470014 | 3.1:-57533230 | None:intergenic |
| TGATGTTGAACCTAAGGAGT+TGG | 0.470055 | 3.1:-57534649 | MS.gene057320:CDS |
| TATAGGATCTCATGGTTTAA+GGG | 0.477057 | 3.1:+57533903 | None:intergenic |
| TATGCAGCTGCACTTGGTAC+TGG | 0.477744 | 3.1:+57533233 | None:intergenic |
| TATAATTGATGTTGAACCTA+AGG | 0.485322 | 3.1:-57534655 | MS.gene057320:CDS |
| AACAAACCTGCAGATGGTAT+AGG | 0.490745 | 3.1:+57533886 | None:intergenic |
| GTGGTGGGGTGGTATAGCAC+TGG | 0.497402 | 3.1:-57535037 | MS.gene057320:CDS |
| TTCCATCAATAACAAGATCA+AGG | 0.509830 | 3.1:+57533931 | None:intergenic |
| AAACCTTATGCAGCTGCACT+TGG | 0.510034 | 3.1:+57533227 | None:intergenic |
| CAATGTCTCTGATCTTATCA+AGG | 0.514069 | 3.1:-57533623 | MS.gene057320:CDS |
| TGCTGTTGAGGAGGTTAAAG+AGG | 0.520637 | 3.1:-57534604 | MS.gene057320:intron |
| TGGTCGAGAAACCAAATGCT+AGG | 0.522788 | 3.1:+57535193 | None:intergenic |
| TGCTCAACAAAGAACATGAA+AGG | 0.527873 | 3.1:-57533277 | MS.gene057320:CDS |
| CCTTGTTGTTAATCAAGTTG+TGG | 0.533219 | 3.1:+57533442 | None:intergenic |
| ATGCAAGACTTAAAGAGATA+AGG | 0.533289 | 3.1:-57533959 | MS.gene057320:CDS |
| GGAAAACTCACGGCCTTGAA+AGG | 0.535505 | 3.1:-57533987 | MS.gene057320:CDS |
| ACCATTTATTCTCTTAAACA+TGG | 0.539672 | 3.1:+57535147 | None:intergenic |
| GATCGCTGCTCATGAGGTTG+AGG | 0.541431 | 3.1:-57534392 | MS.gene057320:CDS |
| AAAATGACCTCGACATTCAT+GGG | 0.547978 | 3.1:-57535000 | MS.gene057320:CDS |
| TGCTACTCAGAAAAGCCAAA+AGG | 0.554388 | 3.1:-57534437 | MS.gene057320:CDS |
| GCTCAACAAAGAACATGAAA+GGG | 0.556354 | 3.1:-57533276 | MS.gene057320:CDS |
| TGAGATCCTATACCATCTGC+AGG | 0.565146 | 3.1:-57533892 | MS.gene057320:intron |
| TACAGCAAAGGAGCATGTGG+TGG | 0.565219 | 3.1:-57535053 | MS.gene057320:intron |
| GATGTTTCCAATAGCTACGC+TGG | 0.569599 | 3.1:-57537136 | MS.gene057320:intron |
| ACAGCAAAGGAGCATGTGGT+GGG | 0.572446 | 3.1:-57535052 | MS.gene057320:intron |
| GCAGATGGTATAGGATCTCA+TGG | 0.574067 | 3.1:+57533895 | None:intergenic |
| AAAAGCATACTATGCTGTTG+AGG | 0.577045 | 3.1:-57534616 | MS.gene057320:CDS |
| ACGTTCGATCGAGAAGGTGG+TGG | 0.579416 | 3.1:-57537269 | MS.gene057320:CDS |
| ATCACGTTCGATCGAGAAGG+TGG | 0.579469 | 3.1:-57537272 | MS.gene057320:CDS |
| CATTAGCACCCTTGCAACCG+AGG | 0.585610 | 3.1:-57534184 | MS.gene057320:intron |
| ACACTTGCTCAGGGATGTGA+AGG | 0.595095 | 3.1:-57534214 | MS.gene057320:CDS |
| CTCATCACGTTCGATCGAGA+AGG | 0.595224 | 3.1:-57537275 | MS.gene057320:CDS |
| CAAAGGAGCATGTGGTGGGG+TGG | 0.599420 | 3.1:-57535048 | MS.gene057320:CDS |
| ATGAGAAACAAACCTGCAGA+TGG | 0.599707 | 3.1:+57533880 | None:intergenic |
| CCACAACTTGATTAACAACA+AGG | 0.604169 | 3.1:-57533442 | MS.gene057320:intron |
| GAAAACGAATGATATGATGC+TGG | 0.610132 | 3.1:-57533505 | MS.gene057320:CDS |
| ATCAGAGATCGCTGCTCATG+AGG | 0.616804 | 3.1:-57534398 | MS.gene057320:CDS |
| AGCATACTATGCTGTTGAGG+AGG | 0.622035 | 3.1:-57534613 | MS.gene057320:CDS |
| ATAGGTGAGCGGAAAACTCA+CGG | 0.624628 | 3.1:-57533997 | MS.gene057320:intron |
| GGTCGAGAAACCAAATGCTA+GGG | 0.629605 | 3.1:+57535194 | None:intergenic |
| GTTTACAGCAAAGGAGCATG+TGG | 0.644927 | 3.1:-57535056 | MS.gene057320:intron |
| TAAATAACCCATGAATGTCG+AGG | 0.645744 | 3.1:+57534993 | None:intergenic |
| ACATTGCTTCGTGATAATTG+TGG | 0.656481 | 3.1:+57535173 | None:intergenic |
| CACTTCTAATGAGAGACGAT+AGG | 0.662773 | 3.1:+57533475 | None:intergenic |
| AGGAGTGGAACACTTGCTCA+GGG | 0.663636 | 3.1:-57534223 | MS.gene057320:CDS |
| GTAGCTATTGGAAACATCAA+CGG | 0.667938 | 3.1:+57537141 | None:intergenic |
| ACGATGCTGAGCAACACTAG+AGG | 0.680391 | 3.1:+57537241 | None:intergenic |
| CAGCAAAGGAGCATGTGGTG+GGG | 0.698587 | 3.1:-57535051 | MS.gene057320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATTTGTAAATTTAG+TGG | - | chr3.1:57535648-57535667 | MS.gene057320:intron | 10.0% |
| !! | AATTACTTCAAATATAAATT+TGG | - | chr3.1:57535192-57535211 | MS.gene057320:CDS | 10.0% |
| !!! | AAGTTTAATAATTTTATCAT+GGG | + | chr3.1:57535975-57535994 | None:intergenic | 10.0% |
| !!! | ACTAAATTTACAAATATTTT+TGG | + | chr3.1:57535649-57535668 | None:intergenic | 10.0% |
| !!! | CTAAATTTACAAATATTTTT+GGG | + | chr3.1:57535648-57535667 | None:intergenic | 10.0% |
| !! | AAAAAAGAAAATACATTTAC+TGG | + | chr3.1:57534445-57534464 | None:intergenic | 15.0% |
| !! | AATAAATAAGAATCTGTTTA+AGG | + | chr3.1:57536385-57536404 | None:intergenic | 15.0% |
| !! | TTTAAATTATTTATGTGAAG+AGG | - | chr3.1:57533571-57533590 | MS.gene057320:intron | 15.0% |
| !!! | GAAGTTTAATAATTTTATCA+TGG | + | chr3.1:57535976-57535995 | None:intergenic | 15.0% |
| !!! | TATTTTGTTTGTTTTTACTT+GGG | - | chr3.1:57536217-57536236 | MS.gene057320:intron | 15.0% |
| !!! | TTATTTTGTTTGTTTTTACT+TGG | - | chr3.1:57536216-57536235 | MS.gene057320:intron | 15.0% |
| !!! | TTTTTACATAAAACAAAATC+AGG | + | chr3.1:57533646-57533665 | None:intergenic | 15.0% |
| !! | AAAGAAATTGCTAATAACTA+TGG | + | chr3.1:57534643-57534662 | None:intergenic | 20.0% |
| !! | AACAAAATAAAAATGAACCA+TGG | + | chr3.1:57536206-57536225 | None:intergenic | 20.0% |
| !! | AACATCAATTATAACCAAAA+CGG | + | chr3.1:57535871-57535890 | None:intergenic | 20.0% |
| !! | AAGAAATTGCTAATAACTAT+GGG | + | chr3.1:57534642-57534661 | None:intergenic | 20.0% |
| !! | AATATTTGTAAATTTAGTGG+CGG | - | chr3.1:57535651-57535670 | MS.gene057320:intron | 20.0% |
| !! | AATTATTTCACACATTCAAT+TGG | + | chr3.1:57535176-57535195 | None:intergenic | 20.0% |
| !! | ATATTAAGGAATCAATGTAA+GGG | + | chr3.1:57534389-57534408 | None:intergenic | 20.0% |
| !! | CAAAATATACAAAGAAATGT+AGG | + | chr3.1:57534238-57534257 | None:intergenic | 20.0% |
| !! | CAAGACTAAAAAAACAAATA+AGG | + | chr3.1:57534727-57534746 | None:intergenic | 20.0% |
| !!! | AGAGATTGTTTTATGAAAAA+AGG | + | chr3.1:57536427-57536446 | None:intergenic | 20.0% |
| !!! | AGCTTTTATATATATTGCTT+TGG | - | chr3.1:57534198-57534217 | MS.gene057320:CDS | 20.0% |
| !!! | ATAATTTTATCATGGGTATA+AGG | + | chr3.1:57535968-57535987 | None:intergenic | 20.0% |
| !!! | CTACATTTCTTTGTATATTT+TGG | - | chr3.1:57534236-57534255 | MS.gene057320:intron | 20.0% |
| !!! | TAATGTATTCTTCTCTATTT+TGG | - | chr3.1:57534589-57534608 | MS.gene057320:intron | 20.0% |
| !!! | TAATTTTATCATGGGTATAA+GGG | + | chr3.1:57535967-57535986 | None:intergenic | 20.0% |
| !!! | TTATTTATCTTTGCTGATTT+TGG | - | chr3.1:57537147-57537166 | MS.gene057320:CDS | 20.0% |
| ! | AATACTCAAACTAAAACCAT+AGG | - | chr3.1:57534069-57534088 | MS.gene057320:intron | 25.0% |
| ! | AATTACAGCAAGAAATTAGA+TGG | + | chr3.1:57536858-57536877 | None:intergenic | 25.0% |
| ! | ACATCAATTATAACCAAAAC+GGG | + | chr3.1:57535870-57535889 | None:intergenic | 25.0% |
| ! | ACCATTTATTCTCTTAAACA+TGG | + | chr3.1:57535389-57535408 | None:intergenic | 25.0% |
| ! | ACTAACGATTTATTTCAAGA+AGG | - | chr3.1:57533856-57533875 | MS.gene057320:intron | 25.0% |
| ! | AGTTATTAGCAATTTCTTTG+AGG | - | chr3.1:57534644-57534663 | MS.gene057320:CDS | 25.0% |
| ! | ATGTACTTTCGTACTTATTA+AGG | + | chr3.1:57534506-57534525 | None:intergenic | 25.0% |
| ! | ATTACAGCAAGAAATTAGAT+GGG | + | chr3.1:57536857-57536876 | None:intergenic | 25.0% |
| ! | ATTCCACTAAGAATAAACAT+TGG | + | chr3.1:57534864-57534883 | None:intergenic | 25.0% |
| ! | ATTGTATATCTCTGACTAAT+TGG | - | chr3.1:57535276-57535295 | MS.gene057320:intron | 25.0% |
| ! | CATATTAAATACTAATCCCT+AGG | - | chr3.1:57536683-57536702 | MS.gene057320:intron | 25.0% |
| ! | CTAATGCAGATACTATAAAA+GGG | - | chr3.1:57534004-57534023 | MS.gene057320:intron | 25.0% |
| ! | GATATTAAGGAATCAATGTA+AGG | + | chr3.1:57534390-57534409 | None:intergenic | 25.0% |
| ! | TAATGCAGATACTATAAAAG+GGG | - | chr3.1:57534005-57534024 | MS.gene057320:intron | 25.0% |
| ! | TATAATTGATGTTGAACCTA+AGG | - | chr3.1:57535878-57535897 | MS.gene057320:intron | 25.0% |
| ! | TCCATGTTTAAGAGAATAAA+TGG | - | chr3.1:57535385-57535404 | MS.gene057320:intron | 25.0% |
| ! | TGAAATAAATCGTTAGTACT+AGG | + | chr3.1:57533853-57533872 | None:intergenic | 25.0% |
| ! | TGTTTAGATCAGATATTCAA+TGG | + | chr3.1:57535451-57535470 | None:intergenic | 25.0% |
| ! | TTTAAGGAGAAAAAAAACCT+CGG | + | chr3.1:57536369-57536388 | None:intergenic | 25.0% |
| !! | AGATTCAGTATCATGAATTT+TGG | - | chr3.1:57537116-57537135 | MS.gene057320:intron | 25.0% |
| !! | AGATTTGACCAATTTTACAT+TGG | + | chr3.1:57534791-57534810 | None:intergenic | 25.0% |
| !! | ATTGATTCCTTAATATCATG+AGG | - | chr3.1:57534393-57534412 | MS.gene057320:CDS | 25.0% |
| !!! | AATCAATGTAAGGGTATTTT+TGG | + | chr3.1:57534380-57534399 | None:intergenic | 25.0% |
| !!! | ATTTCTTGCTGTAATTTGTT+AGG | - | chr3.1:57536862-57536881 | MS.gene057320:intron | 25.0% |
| AAAAACGACTCTTCTGTATA+TGG | - | chr3.1:57536021-57536040 | MS.gene057320:intron | 30.0% | |
| AACAATCTAGAAGAGACATT+CGG | + | chr3.1:57536985-57537004 | None:intergenic | 30.0% | |
| AATGCAGATACTATAAAAGG+GGG | - | chr3.1:57534006-57534025 | MS.gene057320:intron | 30.0% | |
| AATTTGGATAGAGATTGATC+CGG | + | chr3.1:57535811-57535830 | None:intergenic | 30.0% | |
| ACAAACAATGTTTACAGCAA+AGG | - | chr3.1:57535468-57535487 | MS.gene057320:intron | 30.0% | |
| ACGATTTATTTCAAGAAGGT+AGG | - | chr3.1:57533860-57533879 | MS.gene057320:intron | 30.0% | |
| AGAGAATAAATGGTATGAGT+TGG | - | chr3.1:57535395-57535414 | MS.gene057320:intron | 30.0% | |
| AGGAGATAACCATTATAATC+AGG | - | chr3.1:57534413-57534432 | MS.gene057320:CDS | 30.0% | |
| AGTGAGTATATGGTATGATA+TGG | - | chr3.1:57534550-57534569 | MS.gene057320:intron | 30.0% | |
| ATAAATCGTTAGTACTAGGT+CGG | + | chr3.1:57533849-57533868 | None:intergenic | 30.0% | |
| ATACAAAGAAATGTAGGTCT+TGG | + | chr3.1:57534232-57534251 | None:intergenic | 30.0% | |
| ATGAATTGAACCTAACTTCA+TGG | - | chr3.1:57533682-57533701 | MS.gene057320:intron | 30.0% | |
| ATGCAAGACTTAAAGAGATA+AGG | - | chr3.1:57536574-57536593 | MS.gene057320:intron | 30.0% | |
| ATTATAACCAAAACGGGATT+TGG | + | chr3.1:57535864-57535883 | None:intergenic | 30.0% | |
| ATTGAAACATTACTTCACAC+AGG | + | chr3.1:57535591-57535610 | None:intergenic | 30.0% | |
| CATCCAATGTTTATTCTTAG+TGG | - | chr3.1:57534858-57534877 | MS.gene057320:intron | 30.0% | |
| CCTAATGCAGATACTATAAA+AGG | - | chr3.1:57534003-57534022 | MS.gene057320:intron | 30.0% | |
| GAGATAACCATTATAATCAG+GGG | - | chr3.1:57534415-57534434 | MS.gene057320:CDS | 30.0% | |
| GGAGATAACCATTATAATCA+GGG | - | chr3.1:57534414-57534433 | MS.gene057320:CDS | 30.0% | |
| GTGAAAATGTTGTCATGATT+TGG | - | chr3.1:57535698-57535717 | MS.gene057320:intron | 30.0% | |
| GTTATCTCCTCATGATATTA+AGG | + | chr3.1:57534403-57534422 | None:intergenic | 30.0% | |
| TATAGGATCTCATGGTTTAA+GGG | + | chr3.1:57536633-57536652 | None:intergenic | 30.0% | |
| TATCCAAATTGATCATGCTT+TGG | - | chr3.1:57535821-57535840 | MS.gene057320:intron | 30.0% | |
| TCAACAACCAACATAAAACT+TGG | - | chr3.1:57534929-57534948 | MS.gene057320:intron | 30.0% | |
| TCTTTAACTGTTCAGTATGA+TGG | - | chr3.1:57534810-57534829 | MS.gene057320:intron | 30.0% | |
| TGTTCTATGTGATGACTAAA+GGG | - | chr3.1:57534745-57534764 | MS.gene057320:intron | 30.0% | |
| TTACAGCAAGAAATTAGATG+GGG | + | chr3.1:57536856-57536875 | None:intergenic | 30.0% | |
| TTCCATCAATAACAAGATCA+AGG | + | chr3.1:57536605-57536624 | None:intergenic | 30.0% | |
| TTGTTCTATGTGATGACTAA+AGG | - | chr3.1:57534744-57534763 | MS.gene057320:intron | 30.0% | |
| TTTATTTCAAGAAGGTAGGA+CGG | - | chr3.1:57533864-57533883 | MS.gene057320:intron | 30.0% | |
| ! | ATCATGACAACATTTTCACA+AGG | + | chr3.1:57535697-57535716 | None:intergenic | 30.0% |
| ! | CATTTTATGAGACAACTTGT+GGG | + | chr3.1:57534266-57534285 | None:intergenic | 30.0% |
| ! | CCTTTTATAGTATCTGCATT+AGG | + | chr3.1:57534006-57534025 | None:intergenic | 30.0% |
| ! | TCATGACAACATTTTCACAA+GGG | + | chr3.1:57535696-57535715 | None:intergenic | 30.0% |
| !! | AAATGTTGTCATGATTTGGT+TGG | - | chr3.1:57535702-57535721 | MS.gene057320:intron | 30.0% |
| !! | AACATTTTCACAAGGGTATA+AGG | + | chr3.1:57535689-57535708 | None:intergenic | 30.0% |
| !! | ACATTTTCACAAGGGTATAA+GGG | + | chr3.1:57535688-57535707 | None:intergenic | 30.0% |
| !! | ACTTAGCCTTGCTAAAATTA+GGG | + | chr3.1:57533512-57533531 | None:intergenic | 30.0% |
| !! | GATTGAACCAAGTTTTATGT+TGG | + | chr3.1:57534939-57534958 | None:intergenic | 30.0% |
| !! | TACCTTGATCTTGTTATTGA+TGG | - | chr3.1:57536600-57536619 | MS.gene057320:intron | 30.0% |
| !! | TACTTAGCCTTGCTAAAATT+AGG | + | chr3.1:57533513-57533532 | None:intergenic | 30.0% |
| !! | TTTGAGTATTGAGTGTGTAA+TGG | + | chr3.1:57534059-57534078 | None:intergenic | 30.0% |
| !!! | CTGATTTTGGCTCTATATTT+AGG | - | chr3.1:57537160-57537179 | MS.gene057320:CDS | 30.0% |
| AAAAAAAACCTCGGTTGCAA+GGG | + | chr3.1:57536360-57536379 | None:intergenic | 35.0% | |
| AAAATGACCTCGACATTCAT+GGG | - | chr3.1:57535533-57535552 | MS.gene057320:intron | 35.0% | |
| AACCATGAGACATAAATGGA+TGG | - | chr3.1:57536767-57536786 | MS.gene057320:intron | 35.0% | |
| AACTAATAGAAGCCCAAATG+TGG | + | chr3.1:57535052-57535071 | None:intergenic | 35.0% | |
| AATTCTTCTTATCCTTGTGC+AGG | - | chr3.1:57536290-57536309 | MS.gene057320:intron | 35.0% | |
| ACATTGCTTCGTGATAATTG+TGG | + | chr3.1:57535363-57535382 | None:intergenic | 35.0% | |
| ACGAAGGATAGAATATTCCT+TGG | - | chr3.1:57533927-57533946 | MS.gene057320:CDS | 35.0% | |
| AGACAATAATGCAAGTGAAG+AGG | + | chr3.1:57535770-57535789 | None:intergenic | 35.0% | |
| AGATCAGAGACATTGAGATT+TGG | + | chr3.1:57536905-57536924 | None:intergenic | 35.0% | |
| AGGAATATTCTATCCTTCGT+TGG | + | chr3.1:57533927-57533946 | None:intergenic | 35.0% | |
| AGTCCAAAGCATGATCAATT+TGG | + | chr3.1:57535827-57535846 | None:intergenic | 35.0% | |
| ATGTTCAGCAAGCAACTATA+TGG | + | chr3.1:57536256-57536275 | None:intergenic | 35.0% | |
| ATTTGGATAGAGATTGATCC+GGG | + | chr3.1:57535810-57535829 | None:intergenic | 35.0% | |
| CAAACCAGCCTTAAATATCA+GGG | - | chr3.1:57534092-57534111 | MS.gene057320:intron | 35.0% | |
| CAATGTCTCTGATCTTATCA+AGG | - | chr3.1:57536910-57536929 | MS.gene057320:intron | 35.0% | |
| CCACAACTTGATTAACAACA+AGG | - | chr3.1:57537091-57537110 | MS.gene057320:intron | 35.0% | |
| CCACAAGTTGTCTCATAAAA+TGG | - | chr3.1:57534264-57534283 | MS.gene057320:intron | 35.0% | |
| CGAAGGATAGAATATTCCTT+GGG | - | chr3.1:57533928-57533947 | MS.gene057320:CDS | 35.0% | |
| CTTCGAATTGTTTGTGAATG+TGG | - | chr3.1:57536706-57536725 | MS.gene057320:intron | 35.0% | |
| GAAAACGAATGATATGATGC+TGG | - | chr3.1:57537028-57537047 | MS.gene057320:intron | 35.0% | |
| GAGATATTAAAGCCCAAATG+GGG | + | chr3.1:57535626-57535645 | None:intergenic | 35.0% | |
| GATGGTTGAAATGTTTCGTT+AGG | - | chr3.1:57534903-57534922 | MS.gene057320:intron | 35.0% | |
| GCTCAACAAAGAACATGAAA+GGG | - | chr3.1:57537257-57537276 | MS.gene057320:CDS | 35.0% | |
| GGAGATATTAAAGCCCAAAT+GGG | + | chr3.1:57535627-57535646 | None:intergenic | 35.0% | |
| GTAGCTATTGGAAACATCAA+CGG | + | chr3.1:57533395-57533414 | None:intergenic | 35.0% | |
| GTATAGGATCTCATGGTTTA+AGG | + | chr3.1:57536634-57536653 | None:intergenic | 35.0% | |
| GTTGGCAACCAATGTAAAAT+TGG | - | chr3.1:57534780-57534799 | MS.gene057320:intron | 35.0% | |
| TAAATAACCCATGAATGTCG+AGG | + | chr3.1:57535543-57535562 | None:intergenic | 35.0% | |
| TACAGCAAGAAATTAGATGG+GGG | + | chr3.1:57536855-57536874 | None:intergenic | 35.0% | |
| TCCTTGTCATCTTCTTCAAA+AGG | + | chr3.1:57535319-57535338 | None:intergenic | 35.0% | |
| TCTTTACCTTTACCCCATTT+GGG | - | chr3.1:57535611-57535630 | MS.gene057320:intron | 35.0% | |
| TGCTCAACAAAGAACATGAA+AGG | - | chr3.1:57537256-57537275 | MS.gene057320:CDS | 35.0% | |
| TGTCAACCATGAGACATAAA+TGG | - | chr3.1:57536763-57536782 | MS.gene057320:intron | 35.0% | |
| TTCCATCCATTTATGTCTCA+TGG | + | chr3.1:57536772-57536791 | None:intergenic | 35.0% | |
| TTCTTTACCTTTACCCCATT+TGG | - | chr3.1:57535610-57535629 | MS.gene057320:intron | 35.0% | |
| ! | AAAAGCATACTATGCTGTTG+AGG | - | chr3.1:57535917-57535936 | MS.gene057320:intron | 35.0% |
| ! | AACCATTTTGTGACAACTTG+TGG | + | chr3.1:57534295-57534314 | None:intergenic | 35.0% |
| ! | ACAGCATAGTATGCTTTTGT+TGG | + | chr3.1:57535915-57535934 | None:intergenic | 35.0% |
| ! | ACCATTTTGTGACAACTTGT+GGG | + | chr3.1:57534294-57534313 | None:intergenic | 35.0% |
| ! | AGAACTTCTGCAATTTTCCA+TGG | - | chr3.1:57536186-57536205 | MS.gene057320:intron | 35.0% |
| ! | CCATTTTATGAGACAACTTG+TGG | + | chr3.1:57534267-57534286 | None:intergenic | 35.0% |
| ! | TACGCTGTAGCTTTTTACAT+AGG | - | chr3.1:57536518-57536537 | MS.gene057320:intron | 35.0% |
| ! | TAGCTTTTTACATAGGTGAG+CGG | - | chr3.1:57536525-57536544 | MS.gene057320:intron | 35.0% |
| ! | TGTGTTCTAAACCAGAACAT+TGG | - | chr3.1:57534129-57534148 | MS.gene057320:intron | 35.0% |
| ! | TTGAAGGGTTTTCTTAGCTT+TGG | - | chr3.1:57534982-57535001 | MS.gene057320:intron | 35.0% |
| ! | TTGAGTCTAGAGTGAGTATA+TGG | - | chr3.1:57534540-57534559 | MS.gene057320:intron | 35.0% |
| !! | CCTTGTTGTTAATCAAGTTG+TGG | + | chr3.1:57537094-57537113 | None:intergenic | 35.0% |
| !! | TGTATGACAGTTTTGTGTGA+TGG | - | chr3.1:57534885-57534904 | MS.gene057320:intron | 35.0% |
| !! | TTGCTTGGTTCTACTTTCAA+AGG | - | chr3.1:57533367-57533386 | MS.gene057320:intron | 35.0% |
| !! | TTTGTGCCCTAATTTTAGCA+AGG | - | chr3.1:57533503-57533522 | MS.gene057320:CDS | 35.0% |
| AACAAACCTGCAGATGGTAT+AGG | + | chr3.1:57536650-57536669 | None:intergenic | 40.0% | |
| ACAGATGTAGGGACTGAATT+AGG | - | chr3.1:57533784-57533803 | MS.gene057320:intron | 40.0% | |
| ACAGCAAGAAATTAGATGGG+GGG | + | chr3.1:57536854-57536873 | None:intergenic | 40.0% | |
| ACCCACACTTCATATGGATT+TGG | - | chr3.1:57533951-57533970 | MS.gene057320:CDS | 40.0% | |
| ACGACTCTTCTGTATATGGA+CGG | - | chr3.1:57536025-57536044 | MS.gene057320:intron | 40.0% | |
| ATCCTTCGTTGGCAATGATT+AGG | + | chr3.1:57533916-57533935 | None:intergenic | 40.0% | |
| ATGAGAAACAAACCTGCAGA+TGG | + | chr3.1:57536656-57536675 | None:intergenic | 40.0% | |
| ATGGTTGACAATTAGAGGTG+GGG | + | chr3.1:57536753-57536772 | None:intergenic | 40.0% | |
| CAACTCAGTAAACAGATCAG+TGG | + | chr3.1:57535148-57535167 | None:intergenic | 40.0% | |
| CACAAACAATTCGAAGCCTA+GGG | + | chr3.1:57536702-57536721 | None:intergenic | 40.0% | |
| CACTGATCTGTTTACTGAGT+TGG | - | chr3.1:57535146-57535165 | MS.gene057320:intron | 40.0% | |
| CACTTCTAATGAGAGACGAT+AGG | + | chr3.1:57537061-57537080 | None:intergenic | 40.0% | |
| CATGGTTGACAATTAGAGGT+GGG | + | chr3.1:57536754-57536773 | None:intergenic | 40.0% | |
| CCACACTTCATATGGATTTG+GGG | - | chr3.1:57533953-57533972 | MS.gene057320:CDS | 40.0% | |
| CCCAAATCCATATGAAGTGT+GGG | + | chr3.1:57533955-57533974 | None:intergenic | 40.0% | |
| CCCACACTTCATATGGATTT+GGG | - | chr3.1:57533952-57533971 | MS.gene057320:CDS | 40.0% | |
| CTGTTCAGTATGATGGTTGA+AGG | - | chr3.1:57534817-57534836 | MS.gene057320:intron | 40.0% | |
| CTTCAACCATCACACATAAC+TGG | + | chr3.1:57534168-57534187 | None:intergenic | 40.0% | |
| GAAAAAAAACCTCGGTTGCA+AGG | + | chr3.1:57536361-57536380 | None:intergenic | 40.0% | |
| GAAAATGACCTCGACATTCA+TGG | - | chr3.1:57535532-57535551 | MS.gene057320:intron | 40.0% | |
| GAAGACAGCTTACCACATTT+GGG | - | chr3.1:57535037-57535056 | MS.gene057320:CDS | 40.0% | |
| GATGACTAAAGGGTTGTGTT+AGG | - | chr3.1:57534755-57534774 | MS.gene057320:intron | 40.0% | |
| GATGGGGGGAAAAACAATAA+TGG | + | chr3.1:57536840-57536859 | None:intergenic | 40.0% | |
| GATGGTTGAAGGATTGTGTT+AGG | - | chr3.1:57534828-57534847 | MS.gene057320:intron | 40.0% | |
| GATGTTGAACCTAAGGAGTT+GGG | - | chr3.1:57535885-57535904 | MS.gene057320:intron | 40.0% | |
| GCAAACCAGCCTTAAATATC+AGG | - | chr3.1:57534091-57534110 | MS.gene057320:intron | 40.0% | |
| GGGAGATATTAAAGCCCAAA+TGG | + | chr3.1:57535628-57535647 | None:intergenic | 40.0% | |
| GGGATCAGCATTATTTACGT+TGG | + | chr3.1:57536733-57536752 | None:intergenic | 40.0% | |
| GTCTCATGGTTGACAATTAG+AGG | + | chr3.1:57536758-57536777 | None:intergenic | 40.0% | |
| TACACAGAGTAGCAAACATG+TGG | + | chr3.1:57534616-57534635 | None:intergenic | 40.0% | |
| TCACAAACAATTCGAAGCCT+AGG | + | chr3.1:57536703-57536722 | None:intergenic | 40.0% | |
| TCATGGTTGACAATTAGAGG+TGG | + | chr3.1:57536755-57536774 | None:intergenic | 40.0% | |
| TCCCACAAGTTGTCACAAAA+TGG | - | chr3.1:57534290-57534309 | MS.gene057320:intron | 40.0% | |
| TCTATGACAGTTCTGTGTGT+TGG | - | chr3.1:57534959-57534978 | MS.gene057320:intron | 40.0% | |
| TCTTGCATCCAAACCTTTCA+AGG | + | chr3.1:57536562-57536581 | None:intergenic | 40.0% | |
| TGAAGACAGCTTACCACATT+TGG | - | chr3.1:57535036-57535055 | MS.gene057320:CDS | 40.0% | |
| TGATGTTGAACCTAAGGAGT+TGG | - | chr3.1:57535884-57535903 | MS.gene057320:intron | 40.0% | |
| TGCTACTCAGAAAAGCCAAA+AGG | - | chr3.1:57536096-57536115 | MS.gene057320:intron | 40.0% | |
| TGGTCTACCCCTGATTATAA+TGG | + | chr3.1:57534425-57534444 | None:intergenic | 40.0% | |
| TTAAAGCCCAAATGGGGTAA+AGG | + | chr3.1:57535620-57535639 | None:intergenic | 40.0% | |
| TTCATCTGTGCTTTGTATCC+CGG | - | chr3.1:57535789-57535808 | MS.gene057320:intron | 40.0% | |
| TTGAGGAGGTTAAAGAGGTA+GGG | - | chr3.1:57535934-57535953 | MS.gene057320:intron | 40.0% | |
| ! | AGACATTGAGATTTGGTAGC+AGG | + | chr3.1:57536898-57536917 | None:intergenic | 40.0% |
| ! | AGGCATCGTTTAGTATGAGA+TGG | - | chr3.1:57534664-57534683 | MS.gene057320:CDS | 40.0% |
| ! | ATTTGGGGCTGACAAATGAT+TGG | - | chr3.1:57533968-57533987 | MS.gene057320:CDS | 40.0% |
| ! | CTATGTTCCAAATCCCGTTT+TGG | - | chr3.1:57535854-57535873 | MS.gene057320:intron | 40.0% |
| ! | GATCTTATCAAGGCTTTTGC+AGG | - | chr3.1:57536920-57536939 | MS.gene057320:intron | 40.0% |
| ! | TGGTTTAGAACACAGTCCTA+GGG | + | chr3.1:57534123-57534142 | None:intergenic | 40.0% |
| !! | AAACCACAACAAAGCATTGC+AGG | + | chr3.1:57536467-57536486 | None:intergenic | 40.0% |
| !! | AACCACAACAAAGCATTGCA+GGG | + | chr3.1:57536466-57536485 | None:intergenic | 40.0% |
| !! | AGTTCTGTGTGTTGGTTGAA+GGG | - | chr3.1:57534967-57534986 | MS.gene057320:intron | 40.0% |
| !! | ATTTAAGGCTGGTTTGCCTA+TGG | + | chr3.1:57534088-57534107 | None:intergenic | 40.0% |
| !! | GCCTTTTGAAGAAGATGACA+AGG | - | chr3.1:57535315-57535334 | MS.gene057320:intron | 40.0% |
| AAAAGGGGGACTTTGCTTCT+GGG | - | chr3.1:57534020-57534039 | MS.gene057320:intron | 45.0% | |
| AAAGGGTTGTGTTAGGCAGT+TGG | - | chr3.1:57534762-57534781 | MS.gene057320:intron | 45.0% | |
| AAATATCAGGGCCAAACCCT+AGG | - | chr3.1:57534104-57534123 | MS.gene057320:intron | 45.0% | |
| AACACGCTTGCGAGTATCTT+TGG | + | chr3.1:57533338-57533357 | None:intergenic | 45.0% | |
| AAGGTAGGACGGACATTACA+TGG | - | chr3.1:57533875-57533894 | MS.gene057320:intron | 45.0% | |
| ACTCTTCTGTATATGGACGG+TGG | - | chr3.1:57536028-57536047 | MS.gene057320:intron | 45.0% | |
| AGCATACTATGCTGTTGAGG+AGG | - | chr3.1:57535920-57535939 | MS.gene057320:intron | 45.0% | |
| ATAGGTGAGCGGAAAACTCA+CGG | - | chr3.1:57536536-57536555 | MS.gene057320:intron | 45.0% | |
| ATGACAAGGACCCTAGCATT+TGG | - | chr3.1:57535329-57535348 | MS.gene057320:intron | 45.0% | |
| CAGAGATTCGACCAATGTTC+TGG | + | chr3.1:57534143-57534162 | None:intergenic | 45.0% | |
| CCCCAAATCCATATGAAGTG+TGG | + | chr3.1:57533956-57533975 | None:intergenic | 45.0% | |
| CCTAACTTCATGGCTCAAAG+CGG | - | chr3.1:57533692-57533711 | MS.gene057320:intron | 45.0% | |
| CTCTTCTGTATATGGACGGT+GGG | - | chr3.1:57536029-57536048 | MS.gene057320:intron | 45.0% | |
| GATGTTTCCAATAGCTACGC+TGG | - | chr3.1:57533397-57533416 | MS.gene057320:intron | 45.0% | |
| GCAGATGGTATAGGATCTCA+TGG | + | chr3.1:57536641-57536660 | None:intergenic | 45.0% | |
| GCTCATGAGGTTGAGGAAAT+AGG | - | chr3.1:57536148-57536167 | MS.gene057320:intron | 45.0% | |
| GGCAATGATTAGGCATAGCA+CGG | + | chr3.1:57533906-57533925 | None:intergenic | 45.0% | |
| GGCTGACAAATGATTGGAAG+AGG | - | chr3.1:57533974-57533993 | MS.gene057320:CDS | 45.0% | |
| GGGTTCCTATGCCCTTTATT+GGG | + | chr3.1:57533725-57533744 | None:intergenic | 45.0% | |
| GGGTTTGGCCCTGATATTTA+AGG | + | chr3.1:57534103-57534122 | None:intergenic | 45.0% | |
| GGTCGAGAAACCAAATGCTA+GGG | + | chr3.1:57535342-57535361 | None:intergenic | 45.0% | |
| GTTGAGGAGGTTAAAGAGGT+AGG | - | chr3.1:57535933-57535952 | MS.gene057320:intron | 45.0% | |
| GTTGGAATTCCCAACTCCTT+AGG | + | chr3.1:57535897-57535916 | None:intergenic | 45.0% | |
| TAAAAGGGGGACTTTGCTTC+TGG | - | chr3.1:57534019-57534038 | MS.gene057320:intron | 45.0% | |
| TAAACTGACAAGGTGGAACG+TGG | - | chr3.1:57533760-57533779 | MS.gene057320:intron | 45.0% | |
| TAGAACACAGTCCTAGGGTT+TGG | + | chr3.1:57534118-57534137 | None:intergenic | 45.0% | |
| TCCACCTTGTCAGTTTAGCT+CGG | + | chr3.1:57533757-57533776 | None:intergenic | 45.0% | |
| TCTGTGCCAGTTATGTGTGA+TGG | - | chr3.1:57534159-57534178 | MS.gene057320:intron | 45.0% | |
| TGAGATCCTATACCATCTGC+AGG | - | chr3.1:57536641-57536660 | MS.gene057320:intron | 45.0% | |
| TGCCTAATCATTGCCAACGA+AGG | - | chr3.1:57533911-57533930 | MS.gene057320:CDS | 45.0% | |
| TGCTGTTGAGGAGGTTAAAG+AGG | - | chr3.1:57535929-57535948 | MS.gene057320:intron | 45.0% | |
| TGGAACGTGGAACAGATGTA+GGG | - | chr3.1:57533773-57533792 | MS.gene057320:intron | 45.0% | |
| TGGTCGAGAAACCAAATGCT+AGG | + | chr3.1:57535343-57535362 | None:intergenic | 45.0% | |
| TTCTTATCCTTGTGCAGGAG+TGG | - | chr3.1:57536295-57536314 | MS.gene057320:intron | 45.0% | |
| ! | AGCATGATGCGACTTGTTTG+TGG | - | chr3.1:57534692-57534711 | MS.gene057320:intron | 45.0% |
| ! | CTGGTTTAGAACACAGTCCT+AGG | + | chr3.1:57534124-57534143 | None:intergenic | 45.0% |
| ! | GATTGCCCAATAAAGGGCAT+AGG | - | chr3.1:57533717-57533736 | MS.gene057320:intron | 45.0% |
| ! | GCACATGCACAAAGACCTTT+TGG | + | chr3.1:57536114-57536133 | None:intergenic | 45.0% |
| ! | GTTTACAGCAAAGGAGCATG+TGG | - | chr3.1:57535477-57535496 | MS.gene057320:intron | 45.0% |
| ! | TTCCAATAGCTACGCTGGTT+CGG | - | chr3.1:57533402-57533421 | MS.gene057320:intron | 45.0% |
| ! | TTCCCTGCAATGCTTTGTTG+TGG | - | chr3.1:57536461-57536480 | MS.gene057320:intron | 45.0% |
| ! | TTGGCCCTGATATTTAAGGC+TGG | + | chr3.1:57534099-57534118 | None:intergenic | 45.0% |
| !! | AGGTCATTTTCACGCAGCTT+TGG | + | chr3.1:57535523-57535542 | None:intergenic | 45.0% |
| !! | CAGTTCTGTGTGTTGGTTGA+AGG | - | chr3.1:57534966-57534985 | MS.gene057320:intron | 45.0% |
| !! | TTCATTATTATATTATATTT+AGG | - | chr3.1:57537184-57537203 | MS.gene057320:CDS | 5.0% |
| AAAGGGGGACTTTGCTTCTG+GGG | - | chr3.1:57534021-57534040 | MS.gene057320:intron | 50.0% | |
| AACTTCATGGCTCAAAGCGG+AGG | - | chr3.1:57533695-57533714 | MS.gene057320:intron | 50.0% | |
| AAGTGTTCCACTCCTGCACA+AGG | + | chr3.1:57536305-57536324 | None:intergenic | 50.0% | |
| ACACTTGCTCAGGGATGTGA+AGG | - | chr3.1:57536319-57536338 | MS.gene057320:intron | 50.0% | |
| ACCGAGCTAAACTGACAAGG+TGG | - | chr3.1:57533753-57533772 | MS.gene057320:intron | 50.0% | |
| ACGACCGAGCTAAACTGACA+AGG | - | chr3.1:57533750-57533769 | MS.gene057320:intron | 50.0% | |
| ACGATGCTGAGCAACACTAG+AGG | + | chr3.1:57533295-57533314 | None:intergenic | 50.0% | |
| ACTCACGGCCTTGAAAGGTT+TGG | - | chr3.1:57536551-57536570 | MS.gene057320:intron | 50.0% | |
| AGCGGAGGATTGCCCAATAA+AGG | - | chr3.1:57533710-57533729 | MS.gene057320:intron | 50.0% | |
| AGGAGTGGAACACTTGCTCA+GGG | - | chr3.1:57536310-57536329 | MS.gene057320:intron | 50.0% | |
| ATCACGTTCGATCGAGAAGG+TGG | - | chr3.1:57533261-57533280 | MS.gene057320:CDS | 50.0% | |
| ATCAGAGATCGCTGCTCATG+AGG | - | chr3.1:57536135-57536154 | MS.gene057320:intron | 50.0% | |
| ATCCGAACCAGCGTAGCTAT+TGG | + | chr3.1:57533407-57533426 | None:intergenic | 50.0% | |
| CAAACACCAGCCCTTGTTAC+TGG | - | chr3.1:57533819-57533838 | MS.gene057320:intron | 50.0% | |
| CATATGAAGTGTGGGTCCCA+AGG | + | chr3.1:57533947-57533966 | None:intergenic | 50.0% | |
| CTCATCACGTTCGATCGAGA+AGG | - | chr3.1:57533258-57533277 | MS.gene057320:CDS | 50.0% | |
| CTTGGGACCCACACTTCATA+TGG | - | chr3.1:57533945-57533964 | MS.gene057320:CDS | 50.0% | |
| GATACTCGCAAGCGTGTTGT+CGG | - | chr3.1:57533340-57533359 | MS.gene057320:intron | 50.0% | |
| GCGGAGGATTGCCCAATAAA+GGG | - | chr3.1:57533711-57533730 | MS.gene057320:intron | 50.0% | |
| GGAAAACTCACGGCCTTGAA+AGG | - | chr3.1:57536546-57536565 | MS.gene057320:intron | 50.0% | |
| GGGGTTCCTATGCCCTTTAT+TGG | + | chr3.1:57533726-57533745 | None:intergenic | 50.0% | |
| GTGGAACGTGGAACAGATGT+AGG | - | chr3.1:57533772-57533791 | MS.gene057320:intron | 50.0% | |
| TATGCAGCTGCACTTGGTAC+TGG | + | chr3.1:57537303-57537322 | None:intergenic | 50.0% | |
| ! | ACAGCAAAGGAGCATGTGGT+GGG | - | chr3.1:57535481-57535500 | MS.gene057320:intron | 50.0% |
| ! | ATAAAGGGCATAGGAACCCC+TGG | - | chr3.1:57533726-57533745 | MS.gene057320:intron | 50.0% |
| ! | CAGTAACAAGGGCTGGTGTT+TGG | + | chr3.1:57533821-57533840 | None:intergenic | 50.0% |
| ! | CCGCTTTGAGCCATGAAGTT+AGG | + | chr3.1:57533695-57533714 | None:intergenic | 50.0% |
| ! | TAAAGGGCATAGGAACCCCT+GGG | - | chr3.1:57533727-57533746 | MS.gene057320:intron | 50.0% |
| ! | TACAGCAAAGGAGCATGTGG+TGG | - | chr3.1:57535480-57535499 | MS.gene057320:intron | 50.0% |
| !! | CGTGTTGTCGGTGTTTTGCT+TGG | - | chr3.1:57533352-57533371 | MS.gene057320:intron | 50.0% |
| !! | GGACTTTGCTTCTGGGGTAA+GGG | - | chr3.1:57534027-57534046 | MS.gene057320:intron | 50.0% |
| ACGTTCGATCGAGAAGGTGG+TGG | - | chr3.1:57533264-57533283 | MS.gene057320:CDS | 55.0% | |
| CACCAGCCCTTGTTACTGGA+CGG | - | chr3.1:57533823-57533842 | MS.gene057320:intron | 55.0% | |
| CAGGAGTGGAACACTTGCTC+AGG | - | chr3.1:57536309-57536328 | MS.gene057320:intron | 55.0% | |
| CATTAGCACCCTTGCAACCG+AGG | - | chr3.1:57536349-57536368 | MS.gene057320:intron | 55.0% | |
| GATCGCTGCTCATGAGGTTG+AGG | - | chr3.1:57536141-57536160 | MS.gene057320:intron | 55.0% | |
| ! | AGTTTAGCTCGGTCGTCCCA+GGG | + | chr3.1:57533746-57533765 | None:intergenic | 55.0% |
| ! | CAGCAAAGGAGCATGTGGTG+GGG | - | chr3.1:57535482-57535501 | MS.gene057320:intron | 55.0% |
| !! | CTCGGTTGCAAGGGTGCTAA+TGG | + | chr3.1:57536351-57536370 | None:intergenic | 55.0% |
| !! | GGGACTTTGCTTCTGGGGTA+AGG | - | chr3.1:57534026-57534045 | MS.gene057320:intron | 55.0% |
| AGGTCGGCCGTCCAGTAACA+AGG | + | chr3.1:57533833-57533852 | None:intergenic | 60.0% | |
| GGTCGGCCGTCCAGTAACAA+GGG | + | chr3.1:57533832-57533851 | None:intergenic | 60.0% | |
| ! | CAAAGGAGCATGTGGTGGGG+TGG | - | chr3.1:57535485-57535504 | MS.gene057320:intron | 60.0% |
| ! | CAGTTTAGCTCGGTCGTCCC+AGG | + | chr3.1:57533747-57533766 | None:intergenic | 60.0% |
| ! | GTGGTGGGGTGGTATAGCAC+TGG | - | chr3.1:57535496-57535515 | MS.gene057320:intron | 60.0% |
| ! | GTTTAGCTCGGTCGTCCCAG+GGG | + | chr3.1:57533745-57533764 | None:intergenic | 60.0% |
| !! | GCTGCACTTGGTACTGGTGC+TGG | + | chr3.1:57537297-57537316 | None:intergenic | 60.0% |
| GGCCGTCCAGTAACAAGGGC+TGG | + | chr3.1:57533828-57533847 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 57533232 | 57537323 | 57533232 | ID=MS.gene057320 |
| chr3.1 | mRNA | 57533232 | 57537323 | 57533232 | ID=MS.gene057320.t1;Parent=MS.gene057320 |
| chr3.1 | exon | 57537137 | 57537323 | 57537137 | ID=MS.gene057320.t1.exon1;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57537137 | 57537323 | 57537137 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| chr3.1 | exon | 57535149 | 57535241 | 57535149 | ID=MS.gene057320.t1.exon2;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57535149 | 57535241 | 57535149 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| chr3.1 | exon | 57534989 | 57535070 | 57534989 | ID=MS.gene057320.t1.exon3;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57534989 | 57535070 | 57534989 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| chr3.1 | exon | 57534605 | 57534701 | 57534605 | ID=MS.gene057320.t1.exon4;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57534605 | 57534701 | 57534605 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| chr3.1 | exon | 57534386 | 57534461 | 57534386 | ID=MS.gene057320.t1.exon5;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57534386 | 57534461 | 57534386 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| chr3.1 | exon | 57534185 | 57534243 | 57534185 | ID=MS.gene057320.t1.exon6;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57534185 | 57534243 | 57534185 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| chr3.1 | exon | 57533893 | 57534015 | 57533893 | ID=MS.gene057320.t1.exon7;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57533893 | 57534015 | 57533893 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| chr3.1 | exon | 57533614 | 57533671 | 57533614 | ID=MS.gene057320.t1.exon8;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57533614 | 57533671 | 57533614 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| chr3.1 | exon | 57533443 | 57533528 | 57533443 | ID=MS.gene057320.t1.exon9;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57533443 | 57533528 | 57533443 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| chr3.1 | exon | 57533232 | 57533300 | 57533232 | ID=MS.gene057320.t1.exon10;Parent=MS.gene057320.t1 |
| chr3.1 | CDS | 57533232 | 57533300 | 57533232 | ID=cds.MS.gene057320.t1;Parent=MS.gene057320.t1 |
| Gene Sequence |
| Protein sequence |
