Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09242.t1 | XP_013446598.1 | 95.2 | 516 | 24 | 1 | 1 | 516 | 1 | 515 | 2.50E-269 | 937.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09242.t1 | A0A1P8B760 | 61.5 | 488 | 174 | 6 | 27 | 509 | 30 | 508 | 1.3e-152 | 541.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09242.t1 | A0A072U458 | 95.2 | 516 | 24 | 1 | 1 | 516 | 1 | 515 | 1.8e-269 | 937.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055251 | MS.gene09242 | 0.810895 | 9.18E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09242.t1 | MTR_8g080880 | 95.155 | 516 | 24 | 1 | 1 | 516 | 1 | 515 | 0.0 | 994 |
| MS.gene09242.t1 | MTR_8g080890 | 91.245 | 514 | 45 | 0 | 1 | 514 | 1 | 514 | 0.0 | 950 |
| MS.gene09242.t1 | MTR_8g080840 | 85.106 | 517 | 72 | 2 | 1 | 516 | 3 | 515 | 0.0 | 885 |
| MS.gene09242.t1 | MTR_8g097220 | 83.591 | 518 | 78 | 3 | 1 | 516 | 1 | 513 | 0.0 | 870 |
| MS.gene09242.t1 | MTR_8g080870 | 86.037 | 487 | 67 | 1 | 31 | 516 | 1 | 487 | 0.0 | 857 |
| MS.gene09242.t1 | MTR_4g074030 | 59.524 | 504 | 189 | 9 | 16 | 509 | 9 | 507 | 0.0 | 566 |
| MS.gene09242.t1 | MTR_4g073970 | 57.377 | 305 | 116 | 7 | 206 | 500 | 1 | 301 | 2.83e-113 | 338 |
| MS.gene09242.t1 | MTR_4g073980 | 62.590 | 139 | 49 | 2 | 45 | 182 | 26 | 162 | 5.04e-49 | 167 |
| MS.gene09242.t1 | MTR_8g080850 | 88.462 | 78 | 9 | 0 | 439 | 516 | 1 | 78 | 4.40e-40 | 140 |
| MS.gene09242.t1 | MTR_8g095600 | 33.600 | 250 | 149 | 7 | 41 | 288 | 162 | 396 | 5.43e-31 | 126 |
| MS.gene09242.t1 | MTR_8g095600 | 33.600 | 250 | 149 | 7 | 41 | 288 | 162 | 396 | 1.90e-30 | 125 |
| MS.gene09242.t1 | MTR_8g095600 | 33.600 | 250 | 149 | 7 | 41 | 288 | 162 | 396 | 2.41e-30 | 125 |
| MS.gene09242.t1 | MTR_8g095600 | 33.600 | 250 | 149 | 7 | 41 | 288 | 178 | 412 | 2.95e-30 | 125 |
| MS.gene09242.t1 | MTR_3g048950 | 33.457 | 269 | 168 | 5 | 54 | 318 | 55 | 316 | 4.41e-26 | 112 |
| MS.gene09242.t1 | MTR_2g010180 | 24.950 | 501 | 311 | 13 | 33 | 501 | 135 | 602 | 1.85e-21 | 98.6 |
| MS.gene09242.t1 | MTR_2g010180 | 24.950 | 501 | 311 | 13 | 33 | 501 | 121 | 588 | 1.89e-21 | 98.2 |
| MS.gene09242.t1 | MTR_2g010180 | 25.000 | 500 | 310 | 13 | 33 | 500 | 121 | 587 | 2.12e-21 | 98.2 |
| MS.gene09242.t1 | MTR_3g096980 | 25.502 | 498 | 317 | 20 | 41 | 516 | 135 | 600 | 1.92e-17 | 85.9 |
| MS.gene09242.t1 | MTR_1g082750 | 39.496 | 119 | 66 | 3 | 141 | 258 | 63 | 176 | 4.40e-13 | 71.6 |
| MS.gene09242.t1 | MTR_8g094740 | 26.953 | 256 | 175 | 5 | 22 | 272 | 117 | 365 | 3.18e-12 | 69.3 |
| MS.gene09242.t1 | MTR_8g094740 | 26.953 | 256 | 175 | 5 | 22 | 272 | 117 | 365 | 3.26e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09242.t1 | AT4G34880 | 62.910 | 488 | 167 | 6 | 27 | 509 | 30 | 508 | 0.0 | 575 |
| MS.gene09242.t1 | AT4G34880 | 56.057 | 487 | 156 | 7 | 27 | 509 | 30 | 462 | 9.36e-179 | 511 |
| MS.gene09242.t1 | AT5G07360 | 33.469 | 245 | 148 | 7 | 41 | 282 | 204 | 436 | 2.73e-28 | 119 |
| MS.gene09242.t1 | AT5G07360 | 33.469 | 245 | 148 | 7 | 41 | 282 | 204 | 436 | 2.73e-28 | 119 |
| MS.gene09242.t1 | AT3G25660 | 33.673 | 294 | 176 | 8 | 53 | 339 | 57 | 338 | 3.60e-25 | 109 |
| MS.gene09242.t1 | AT5G07360 | 33.061 | 245 | 142 | 8 | 41 | 282 | 204 | 429 | 3.84e-25 | 109 |
| MS.gene09242.t1 | AT5G64440 | 27.734 | 256 | 169 | 5 | 36 | 284 | 125 | 371 | 2.26e-17 | 85.9 |
| MS.gene09242.t1 | AT1G08980 | 40.336 | 119 | 65 | 3 | 141 | 258 | 64 | 177 | 6.70e-14 | 74.3 |
Find 126 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAATATACTCACCGATTT+TGG | 0.052657 | 4.1:-14819149 | None:intergenic |
| GTTGCATGGAATACCTATTT+TGG | 0.183488 | 4.1:+14816829 | MS.gene09242:CDS |
| AAAGCTGGGGCTATTATATT+AGG | 0.207407 | 4.1:+14816959 | MS.gene09242:CDS |
| GTGAAGCAACTAATTCTTTC+AGG | 0.216627 | 4.1:-14819082 | None:intergenic |
| CTCCTTTGAGAACCGGGTTT+TGG | 0.235272 | 4.1:-14816721 | None:intergenic |
| AATATCAGTAGCAGCAAATT+TGG | 0.254182 | 4.1:+14818310 | MS.gene09242:CDS |
| GTGTCTTGCCTTGGGCTAAT+TGG | 0.289799 | 4.1:-14818446 | None:intergenic |
| TGAGTGAGTGGTCACATTAC+AGG | 0.307159 | 4.1:+14816993 | MS.gene09242:CDS |
| AATTGAGCATAGCCACCTTT+TGG | 0.307622 | 4.1:-14818717 | None:intergenic |
| ATGACAAGATTGTCACATAA+TGG | 0.309835 | 4.1:+14819421 | MS.gene09242:CDS |
| TTGATGTTAACTGCTTTCTT+TGG | 0.312414 | 4.1:-14816661 | None:intergenic |
| TCTGCTTGTGCTAATGCATC+TGG | 0.313056 | 4.1:-14816758 | None:intergenic |
| ATGTTATCCTTAACCAAAAT+AGG | 0.317243 | 4.1:-14816842 | None:intergenic |
| CAGCCTGCAGCATGAGATCT+TGG | 0.321727 | 4.1:-14819351 | None:intergenic |
| GTTTGGAAATGACACATTAC+TGG | 0.325517 | 4.1:+14818797 | MS.gene09242:CDS |
| TACCCAACTGTGTCTTGCCT+TGG | 0.328875 | 4.1:-14818455 | None:intergenic |
| CATACATGAAGGGCATAAAA+TGG | 0.329473 | 4.1:-14818366 | None:intergenic |
| GCTGAAAACACAAACGGAAT+TGG | 0.344147 | 4.1:+14819370 | MS.gene09242:CDS |
| TGGATTGAGAGGAAAGAGAT+TGG | 0.350640 | 4.1:+14818752 | MS.gene09242:CDS |
| GTGCTTTGGTCCTTCTCTCT+TGG | 0.365774 | 4.1:-14816790 | None:intergenic |
| AGACTTACCTTAACGTGTTT+AGG | 0.366426 | 4.1:-14818839 | None:intergenic |
| TCCAATACTCCTTTGAGAAC+CGG | 0.372772 | 4.1:-14816728 | None:intergenic |
| AAGCACCTGGTTCTCTTTCA+AGG | 0.377380 | 4.1:+14816807 | MS.gene09242:CDS |
| ACCCAACTGTGTCTTGCCTT+GGG | 0.380722 | 4.1:-14818454 | None:intergenic |
| GTAAGAATATACTACGAGTT+TGG | 0.386299 | 4.1:+14818780 | MS.gene09242:CDS |
| TGACAAGATTGTCACATAAT+GGG | 0.387697 | 4.1:+14819422 | MS.gene09242:CDS |
| CTTGCCATTGGAGGTTATCC+TGG | 0.389584 | 4.1:+14819514 | MS.gene09242:CDS |
| TCAGATACAGTCCTGCAAAT+AGG | 0.391218 | 4.1:-14818618 | None:intergenic |
| TGAAAGAGAACCAGGTGCTT+TGG | 0.397701 | 4.1:-14816804 | None:intergenic |
| TTTGCTGCTACTGATATTGC+TGG | 0.399338 | 4.1:-14818305 | None:intergenic |
| GTTGTTGTTGATAGCATAGA+AGG | 0.400557 | 4.1:-14816581 | None:intergenic |
| TTCTTTCAGGTACTTATTCA+AGG | 0.401325 | 4.1:-14819069 | None:intergenic |
| CAGCCATTTGGAATTTGCTT+CGG | 0.404070 | 4.1:+14819568 | MS.gene09242:CDS |
| AAGGGAGTGTAACTAGTAGA+AGG | 0.404094 | 4.1:-14816562 | None:intergenic |
| TAAGCAATTTCAATCAACTT+TGG | 0.417086 | 4.1:-14819610 | None:intergenic |
| AGCTACACCTAAACACGTTA+AGG | 0.417453 | 4.1:+14818832 | MS.gene09242:CDS |
| CTGAAAACACAAACGGAATT+GGG | 0.420174 | 4.1:+14819371 | MS.gene09242:CDS |
| TGGTCACATTACAGGTCTAA+TGG | 0.420524 | 4.1:+14817001 | MS.gene09242:CDS |
| GCTCAATTTCTAAAGAAAGA+TGG | 0.421932 | 4.1:+14818732 | MS.gene09242:CDS |
| TATGAAAAGGATCAGCCATT+TGG | 0.422331 | 4.1:+14819556 | MS.gene09242:CDS |
| CCCGGTTCTCAAAGGAGTAT+TGG | 0.431167 | 4.1:+14816727 | MS.gene09242:CDS |
| GTTAACAAGTTAAGGAAAGC+TGG | 0.436209 | 4.1:+14816944 | MS.gene09242:CDS |
| CAAGGATCATCCAATGTGTA+TGG | 0.439013 | 4.1:-14818266 | None:intergenic |
| AAGCTGGGGCTATTATATTA+GGG | 0.441388 | 4.1:+14816960 | MS.gene09242:CDS |
| GCTTTCTTTGGAAGGCAAGT+TGG | 0.441871 | 4.1:-14816649 | None:intergenic |
| CAGGTGTAGTTAACAAGTTA+AGG | 0.444024 | 4.1:+14816936 | MS.gene09242:CDS |
| TGATGCTGTGGTAATACCTT+TGG | 0.445327 | 4.1:+14819474 | MS.gene09242:CDS |
| TCGTAGGAGAAACTTGAGTA+TGG | 0.447769 | 4.1:+14819328 | MS.gene09242:intron |
| CCAATACTCCTTTGAGAACC+GGG | 0.467786 | 4.1:-14816727 | None:intergenic |
| TTTAGTAGCATACTTGCCAT+TGG | 0.470128 | 4.1:+14819502 | MS.gene09242:CDS |
| GCCCAAGGCAAGACACAGTT+GGG | 0.473558 | 4.1:+14818453 | MS.gene09242:CDS |
| CAACAAGAAACACCCAAAAT+CGG | 0.477192 | 4.1:+14819136 | MS.gene09242:CDS |
| TTAACTACACCTGCATCTCT+TGG | 0.477941 | 4.1:-14816926 | None:intergenic |
| GAGAGGAAAGAGATTGGGAG+TGG | 0.480046 | 4.1:+14818758 | MS.gene09242:CDS |
| TCATGTATGAACTCAGTAGT+AGG | 0.484329 | 4.1:+14818380 | MS.gene09242:CDS |
| GGTTCTCTTTCAAGGTTGCA+TGG | 0.486306 | 4.1:+14816815 | MS.gene09242:CDS |
| ATCAAACTTCTAACTTTCGA+AGG | 0.491265 | 4.1:-14819672 | None:intergenic |
| GGATTGAGAGGAAAGAGATT+GGG | 0.491920 | 4.1:+14818753 | MS.gene09242:CDS |
| CCATTTGGAATTTGCTTCGG+AGG | 0.497867 | 4.1:+14819571 | MS.gene09242:CDS |
| TTAACAAGTTAAGGAAAGCT+GGG | 0.500893 | 4.1:+14816945 | MS.gene09242:CDS |
| AATGGCAAGTATGCTACTAA+AGG | 0.505989 | 4.1:-14819500 | None:intergenic |
| ATTTGCTTCGGAGGTTTGAA+AGG | 0.508083 | 4.1:+14819580 | MS.gene09242:CDS |
| AAAATTGTCGATGCCTGCTA+TGG | 0.508490 | 4.1:-14818661 | None:intergenic |
| TCAGTAGTGCCAAGAGATGC+AGG | 0.509284 | 4.1:+14816917 | MS.gene09242:CDS |
| AGTAGCATACTTGCCATTGG+AGG | 0.514738 | 4.1:+14819505 | MS.gene09242:CDS |
| GCATCAAAGTATATCCCAAA+AGG | 0.517964 | 4.1:+14818702 | MS.gene09242:CDS |
| TGTTAACTGCTTTCTTTGGA+AGG | 0.518372 | 4.1:-14816657 | None:intergenic |
| TGCAACCTTGAAAGAGAACC+AGG | 0.523206 | 4.1:-14816812 | None:intergenic |
| TCTAACTTTCGAAGGGGAGG+TGG | 0.524924 | 4.1:-14819664 | None:intergenic |
| CTAAAGAAAGATGGATTGAG+AGG | 0.525250 | 4.1:+14818741 | MS.gene09242:CDS |
| TGGCCAAGATCTCATGCTGC+AGG | 0.534153 | 4.1:+14819348 | MS.gene09242:CDS |
| TACGTTCTTGAAACCATAGC+AGG | 0.539094 | 4.1:+14818648 | MS.gene09242:CDS |
| TGTTCCAGCAGGATATGAAA+AGG | 0.539625 | 4.1:+14819543 | MS.gene09242:CDS |
| CCTCCGAAGCAAATTCCAAA+TGG | 0.542753 | 4.1:-14819571 | None:intergenic |
| GATCAAAGTTGCTTGCTCAA+AGG | 0.544559 | 4.1:-14819635 | None:intergenic |
| TGCTTCACCAGTGAAAAGCT+TGG | 0.546928 | 4.1:+14819097 | MS.gene09242:CDS |
| ACTACTGAGTTCATACATGA+AGG | 0.549148 | 4.1:-14818377 | None:intergenic |
| TGCTAGAGGTGGACAAGGAA+AGG | 0.550614 | 4.1:+14817042 | MS.gene09242:CDS |
| GATAAGCTAAACACTACTGC+AGG | 0.551568 | 4.1:+14816875 | MS.gene09242:CDS |
| TTGTTGTTGATAGCATAGAA+GGG | 0.551701 | 4.1:-14816580 | None:intergenic |
| TCAAACTTCTAACTTTCGAA+GGG | 0.553186 | 4.1:-14819671 | None:intergenic |
| GGCTAGTGGATTCTCAATCA+AGG | 0.555061 | 4.1:+14816607 | MS.gene09242:CDS |
| AGCCCAAGGCAAGACACAGT+TGG | 0.555092 | 4.1:+14818452 | MS.gene09242:CDS |
| CCTGCTGGAACAATCACTCC+AGG | 0.559268 | 4.1:-14819532 | None:intergenic |
| CCTGGAGTGATTGTTCCAGC+AGG | 0.563666 | 4.1:+14819532 | MS.gene09242:CDS |
| GGAAGGCCACTTTGAGTGAG+TGG | 0.565034 | 4.1:+14816981 | MS.gene09242:CDS |
| TCAACAACAACCTTGGCTAG+TGG | 0.566924 | 4.1:+14816593 | MS.gene09242:CDS |
| CTAATGGAGCTCCTAGCGGT+TGG | 0.569270 | 4.1:+14817017 | MS.gene09242:CDS |
| GTTGGTCTCACTAGTAGAGC+AGG | 0.569449 | 4.1:+14818416 | MS.gene09242:CDS |
| CTGCAGGCTGAAAACACAAA+CGG | 0.569958 | 4.1:+14819364 | MS.gene09242:CDS |
| ATCCAAAACCCGGTTCTCAA+AGG | 0.571970 | 4.1:+14816719 | MS.gene09242:CDS |
| GATTGAGAATCCACTAGCCA+AGG | 0.574276 | 4.1:-14816603 | None:intergenic |
| TTTGCTTCGGAGGTTTGAAA+GGG | 0.576489 | 4.1:+14819581 | MS.gene09242:CDS |
| AAGAAATAAACTTGATGCTG+TGG | 0.585547 | 4.1:+14819462 | MS.gene09242:CDS |
| CTACTGAGTTCATACATGAA+GGG | 0.587717 | 4.1:-14818376 | None:intergenic |
| GGTTCTCAAAGGAGTATTGG+AGG | 0.589717 | 4.1:+14816730 | MS.gene09242:CDS |
| CCAAATTAAAATCCAAAACC+CGG | 0.591273 | 4.1:+14816709 | MS.gene09242:CDS |
| CCTAGCGGTTGGAGTGCTAG+AGG | 0.596039 | 4.1:+14817028 | MS.gene09242:CDS |
| TATGCTATCAACAACAACCT+TGG | 0.596156 | 4.1:+14816586 | MS.gene09242:CDS |
| CCTCTAGCACTCCAACCGCT+AGG | 0.596959 | 4.1:-14817028 | None:intergenic |
| ATGTGACCACTCACTCAAAG+TGG | 0.600148 | 4.1:-14816987 | None:intergenic |
| GAGAGAAGGACCAAAGCACC+TGG | 0.601549 | 4.1:+14816794 | MS.gene09242:CDS |
| CACTCCAGGATAACCTCCAA+TGG | 0.611824 | 4.1:-14819518 | None:intergenic |
| TTCTTCAAAATCAGGCGAAG+AGG | 0.612164 | 4.1:+14818951 | MS.gene09242:intron |
| ACTTCTAACTTTCGAAGGGG+AGG | 0.613064 | 4.1:-14819667 | None:intergenic |
| GATCCTTGTGGATCAAGTAG+TGG | 0.622632 | 4.1:+14818281 | MS.gene09242:CDS |
| TGGGGCTATTATATTAGGGA+AGG | 0.623176 | 4.1:+14816964 | MS.gene09242:CDS |
| AGGGCATAAAATGGAGCCAT+CGG | 0.628207 | 4.1:-14818357 | None:intergenic |
| TCAAAGTATATCCCAAAAGG+TGG | 0.630247 | 4.1:+14818705 | MS.gene09242:CDS |
| TACACATTGGATGATCCTTG+TGG | 0.640179 | 4.1:+14818269 | MS.gene09242:CDS |
| AGCGGTTGGAGTGCTAGAGG+TGG | 0.641094 | 4.1:+14817031 | MS.gene09242:CDS |
| ATAAAGCTGACCAAGAGAGA+AGG | 0.642713 | 4.1:+14816780 | MS.gene09242:CDS |
| CTACTAGTGAGACCAACCGT+TGG | 0.644995 | 4.1:-14818410 | None:intergenic |
| AATTTGGTGACTGTGTCACT+TGG | 0.645354 | 4.1:+14818326 | MS.gene09242:CDS |
| GTAGGCATCAAACCAACGGT+TGG | 0.648249 | 4.1:+14818398 | MS.gene09242:CDS |
| ATGCTACTAAAGGATGCCAA+AGG | 0.648785 | 4.1:-14819490 | None:intergenic |
| AAGAGAGCTAGCACATGCTG+AGG | 0.651382 | 4.1:-14816519 | None:intergenic |
| GTGTAGTTCCAATTAGCCCA+AGG | 0.651600 | 4.1:+14818438 | MS.gene09242:CDS |
| TGGAGTGCTAGAGGTGGACA+AGG | 0.653815 | 4.1:+14817037 | MS.gene09242:CDS |
| TAACAAGTTAAGGAAAGCTG+GGG | 0.661025 | 4.1:+14816946 | MS.gene09242:CDS |
| CAAACTTCTAACTTTCGAAG+GGG | 0.687115 | 4.1:-14819670 | None:intergenic |
| AGTAGTAGGCATCAAACCAA+CGG | 0.690720 | 4.1:+14818394 | MS.gene09242:CDS |
| TGTGCAGAATCCATACACAT+TGG | 0.705508 | 4.1:+14818256 | MS.gene09242:intron |
| AGGTCTAATGGAGCTCCTAG+CGG | 0.708611 | 4.1:+14817013 | MS.gene09242:CDS |
| TCACTTGGTACTGAAACCGA+TGG | 0.716676 | 4.1:+14818341 | MS.gene09242:CDS |
| GGTCCACTACTTGATCCACA+AGG | 0.733820 | 4.1:-14818284 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTCATATTACTTAAAT+AGG | + | chr4.1:14817794-14817813 | MS.gene09242:intron | 10.0% |
| !! | TAAAAATGTTCATAATATAT+AGG | - | chr4.1:14817524-14817543 | None:intergenic | 10.0% |
| !!! | TGACTAGTTTTTTTTTATTA+AGG | - | chr4.1:14817327-14817346 | None:intergenic | 15.0% |
| !! | ATTTAATAGCAAAATGTCTT+TGG | - | chr4.1:14818566-14818585 | None:intergenic | 20.0% |
| !! | CAATTTGATCTAAGTTTAAA+TGG | + | chr4.1:14817550-14817569 | MS.gene09242:intron | 20.0% |
| !! | TCACTAATATAATATCCAAT+GGG | + | chr4.1:14817344-14817363 | MS.gene09242:intron | 20.0% |
| !!! | AAAAAGTGAGTGAATATTTT+TGG | + | chr4.1:14818141-14818160 | MS.gene09242:intron | 20.0% |
| !!! | AAATATTCACTCACTTTTTT+TGG | - | chr4.1:14818140-14818159 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCTTAAATAGAGA+AGG | - | chr4.1:14817902-14817921 | None:intergenic | 20.0% |
| !!! | ATAAAGTTTTTCATCTTAAG+TGG | + | chr4.1:14817264-14817283 | MS.gene09242:intron | 20.0% |
| !!! | ATAATCAACTTGAGTTTTTA+GGG | + | chr4.1:14817612-14817631 | MS.gene09242:intron | 20.0% |
| !!! | CATAATGAAGTTATTACTTT+TGG | - | chr4.1:14818170-14818189 | None:intergenic | 20.0% |
| !!! | TAATATATAGGCTTTTAAAC+AGG | - | chr4.1:14817512-14817531 | None:intergenic | 20.0% |
| !!! | TTAAGCCTATTTAACTTAAA+AGG | - | chr4.1:14817866-14817885 | None:intergenic | 20.0% |
| ! | AATTGTTGTATAAACATCGT+AGG | + | chr4.1:14819312-14819331 | MS.gene09242:intron | 25.0% |
| ! | ATGTTATCCTTAACCAAAAT+AGG | - | chr4.1:14816845-14816864 | None:intergenic | 25.0% |
| ! | CTCTATTTAAGAAAAAAGTC+TGG | + | chr4.1:14817903-14817922 | MS.gene09242:intron | 25.0% |
| ! | CTTTATGTAACAAATAGGAA+TGG | - | chr4.1:14819259-14819278 | None:intergenic | 25.0% |
| ! | GTCACTAATATAATATCCAA+TGG | + | chr4.1:14817343-14817362 | MS.gene09242:intron | 25.0% |
| ! | TAAGCAATTTCAATCAACTT+TGG | - | chr4.1:14819613-14819632 | None:intergenic | 25.0% |
| ! | TTCATATTACTTAAATAGGC+CGG | + | chr4.1:14817798-14817817 | MS.gene09242:intron | 25.0% |
| !! | CATAATCAACTTGAGTTTTT+AGG | + | chr4.1:14817611-14817630 | MS.gene09242:intron | 25.0% |
| !!! | GCTTAGGCTTTAAAAAAATA+TGG | - | chr4.1:14817456-14817475 | None:intergenic | 25.0% |
| !!! | TGTTGACTTAAAGAAAACAT+AGG | - | chr4.1:14818511-14818530 | None:intergenic | 25.0% |
| !!! | TTTGGATTTTAATTTGGTTG+AGG | - | chr4.1:14816706-14816725 | None:intergenic | 25.0% |
| AAAAGCCTCTTAAGCTTATT+AGG | - | chr4.1:14817824-14817843 | None:intergenic | 30.0% | |
| AAGAAATAAACTTGATGCTG+TGG | + | chr4.1:14819462-14819481 | MS.gene09242:CDS | 30.0% | |
| AATATAATATCCAATGGGTG+TGG | + | chr4.1:14817349-14817368 | MS.gene09242:intron | 30.0% | |
| AATATCAGTAGCAGCAAATT+TGG | + | chr4.1:14818310-14818329 | MS.gene09242:CDS | 30.0% | |
| ATACTTAAGTTCCTATGAGA+AGG | - | chr4.1:14818193-14818212 | None:intergenic | 30.0% | |
| ATAGGCTTAAAAAAAAGCCT+AGG | + | chr4.1:14817876-14817895 | MS.gene09242:intron | 30.0% | |
| ATCTTAAGTGGTAGAGTTAT+AGG | + | chr4.1:14817276-14817295 | MS.gene09242:intron | 30.0% | |
| ATGACAAGATTGTCACATAA+TGG | + | chr4.1:14819421-14819440 | MS.gene09242:CDS | 30.0% | |
| CATAGGAACTTAAGTATGAA+TGG | + | chr4.1:14818196-14818215 | MS.gene09242:intron | 30.0% | |
| CCAAATTAAAATCCAAAACC+CGG | + | chr4.1:14816709-14816728 | MS.gene09242:CDS | 30.0% | |
| CCAATTTGCCACATATATAT+AGG | - | chr4.1:14818483-14818502 | None:intergenic | 30.0% | |
| CCTATATATATGTGGCAAAT+TGG | + | chr4.1:14818480-14818499 | MS.gene09242:intron | 30.0% | |
| CTGGACTTTATGTAACAAAT+AGG | - | chr4.1:14819264-14819283 | None:intergenic | 30.0% | |
| GTAAGAATATACTACGAGTT+TGG | + | chr4.1:14818780-14818799 | MS.gene09242:CDS | 30.0% | |
| TCAAACTTCTAACTTTCGAA+GGG | - | chr4.1:14819674-14819693 | None:intergenic | 30.0% | |
| TGACAAGATTGTCACATAAT+GGG | + | chr4.1:14819422-14819441 | MS.gene09242:CDS | 30.0% | |
| TGTGTACTTTCTTCAAAATC+AGG | + | chr4.1:14818943-14818962 | MS.gene09242:intron | 30.0% | |
| TTAACAAGTTAAGGAAAGCT+GGG | + | chr4.1:14816945-14816964 | MS.gene09242:CDS | 30.0% | |
| TTGATGTTAACTGCTTTCTT+TGG | - | chr4.1:14816664-14816683 | None:intergenic | 30.0% | |
| ! | AATCTCTTCTTAGGTGTTTT+AGG | - | chr4.1:14818061-14818080 | None:intergenic | 30.0% |
| ! | ATGTGTAAACATTGATTGTG+TGG | + | chr4.1:14818584-14818603 | MS.gene09242:intron | 30.0% |
| ! | CCTATTTAACTTAAAAGGTC+AGG | - | chr4.1:14817861-14817880 | None:intergenic | 30.0% |
| ! | GCTCAATTTCTAAAGAAAGA+TGG | + | chr4.1:14818732-14818751 | MS.gene09242:CDS | 30.0% |
| ! | TACTTAATTTGACCATGATC+TGG | + | chr4.1:14817087-14817106 | MS.gene09242:intron | 30.0% |
| ! | TTCTTTCAGGTACTTATTCA+AGG | - | chr4.1:14819072-14819091 | None:intergenic | 30.0% |
| !! | AGGCTTTAAAAAAATATGGC+AGG | - | chr4.1:14817452-14817471 | None:intergenic | 30.0% |
| !! | ATGAATGGTTCTAGAAAATG+AGG | + | chr4.1:14818211-14818230 | MS.gene09242:intron | 30.0% |
| !! | TTGTTGTTGATAGCATAGAA+GGG | - | chr4.1:14816583-14816602 | None:intergenic | 30.0% |
| !!! | AAGTGAGTGAATATTTTTGG+AGG | + | chr4.1:14818144-14818163 | MS.gene09242:intron | 30.0% |
| !!! | ACAATATACTCACCGATTTT+GGG | - | chr4.1:14819151-14819170 | None:intergenic | 30.0% |
| !!! | ATTCACTCACTTTTTTTGGT+TGG | - | chr4.1:14818136-14818155 | None:intergenic | 30.0% |
| !!! | ATTTATCCCTCACTCTTTTT+TGG | - | chr4.1:14817233-14817252 | None:intergenic | 30.0% |
| !!! | ATTTTTTTAAAGCCTAAGCC+TGG | + | chr4.1:14817457-14817476 | MS.gene09242:intron | 30.0% |
| !!! | CCTGACCTTTTAAGTTAAAT+AGG | + | chr4.1:14817858-14817877 | MS.gene09242:intron | 30.0% |
| !!! | TACAATATACTCACCGATTT+TGG | - | chr4.1:14819152-14819171 | None:intergenic | 30.0% |
| !!! | TGGAATACCTATTTTGGTTA+AGG | + | chr4.1:14816835-14816854 | MS.gene09242:CDS | 30.0% |
| !!! | TTGATTGTGTGGTTTTGTAT+AGG | + | chr4.1:14818595-14818614 | MS.gene09242:intron | 30.0% |
| !!! | TTTATCCCTCACTCTTTTTT+GGG | - | chr4.1:14817232-14817251 | None:intergenic | 30.0% |
| AAAGCTGGGGCTATTATATT+AGG | + | chr4.1:14816959-14816978 | MS.gene09242:CDS | 35.0% | |
| AAGCTGGGGCTATTATATTA+GGG | + | chr4.1:14816960-14816979 | MS.gene09242:CDS | 35.0% | |
| AATGGCAAGTATGCTACTAA+AGG | - | chr4.1:14819503-14819522 | None:intergenic | 35.0% | |
| ACTACTGAGTTCATACATGA+AGG | - | chr4.1:14818380-14818399 | None:intergenic | 35.0% | |
| ACTTCATTATGCCTTCTCAT+AGG | + | chr4.1:14818179-14818198 | MS.gene09242:intron | 35.0% | |
| AGACTTACCTTAACGTGTTT+AGG | - | chr4.1:14818842-14818861 | None:intergenic | 35.0% | |
| ATCCAGACTAATCTCTTCTT+AGG | - | chr4.1:14818070-14818089 | None:intergenic | 35.0% | |
| CAAACTTCTAACTTTCGAAG+GGG | - | chr4.1:14819673-14819692 | None:intergenic | 35.0% | |
| CAACAAGAAACACCCAAAAT+CGG | + | chr4.1:14819136-14819155 | MS.gene09242:CDS | 35.0% | |
| CAGGTGTAGTTAACAAGTTA+AGG | + | chr4.1:14816936-14816955 | MS.gene09242:CDS | 35.0% | |
| CTACTGAGTTCATACATGAA+GGG | - | chr4.1:14818379-14818398 | None:intergenic | 35.0% | |
| CTGAAAACACAAACGGAATT+GGG | + | chr4.1:14819371-14819390 | MS.gene09242:CDS | 35.0% | |
| GCATCAAAGTATATCCCAAA+AGG | + | chr4.1:14818702-14818721 | MS.gene09242:CDS | 35.0% | |
| GTGAAGCAACTAATTCTTTC+AGG | - | chr4.1:14819085-14819104 | None:intergenic | 35.0% | |
| GTTAACAAGTTAAGGAAAGC+TGG | + | chr4.1:14816944-14816963 | MS.gene09242:CDS | 35.0% | |
| GTTTGGAAATGACACATTAC+TGG | + | chr4.1:14818797-14818816 | MS.gene09242:CDS | 35.0% | |
| TAACAAGTTAAGGAAAGCTG+GGG | + | chr4.1:14816946-14816965 | MS.gene09242:CDS | 35.0% | |
| TATGAAAAGGATCAGCCATT+TGG | + | chr4.1:14819556-14819575 | MS.gene09242:CDS | 35.0% | |
| TATGCTATCAACAACAACCT+TGG | + | chr4.1:14816586-14816605 | MS.gene09242:CDS | 35.0% | |
| TCAAAGTATATCCCAAAAGG+TGG | + | chr4.1:14818705-14818724 | MS.gene09242:CDS | 35.0% | |
| TCATGTATGAACTCAGTAGT+AGG | + | chr4.1:14818380-14818399 | MS.gene09242:CDS | 35.0% | |
| TGAATTGAAAAGCCAGATCA+TGG | - | chr4.1:14817102-14817121 | None:intergenic | 35.0% | |
| TGGGTAAGCCTATATATATG+TGG | + | chr4.1:14818472-14818491 | MS.gene09242:intron | 35.0% | |
| TGTTAACCACTGAGCTTATA+GGG | + | chr4.1:14817379-14817398 | MS.gene09242:intron | 35.0% | |
| TGTTAACTGCTTTCTTTGGA+AGG | - | chr4.1:14816660-14816679 | None:intergenic | 35.0% | |
| TTCTTAAATAGAGAAGGCCT+AGG | - | chr4.1:14817896-14817915 | None:intergenic | 35.0% | |
| TTGTTAACCACTGAGCTTAT+AGG | + | chr4.1:14817378-14817397 | MS.gene09242:intron | 35.0% | |
| TTTAAGAAAAAAGTCTGGCC+TGG | + | chr4.1:14817908-14817927 | MS.gene09242:intron | 35.0% | |
| TTTAGTAGCATACTTGCCAT+TGG | + | chr4.1:14819502-14819521 | MS.gene09242:CDS | 35.0% | |
| ! | ATAGCAAAATGTCTTTGGAG+AGG | - | chr4.1:14818561-14818580 | None:intergenic | 35.0% |
| ! | CATACATGAAGGGCATAAAA+TGG | - | chr4.1:14818369-14818388 | None:intergenic | 35.0% |
| ! | GACAGTATCAGACTTTTAGA+AGG | - | chr4.1:14817483-14817502 | None:intergenic | 35.0% |
| ! | GTTGCATGGAATACCTATTT+TGG | + | chr4.1:14816829-14816848 | MS.gene09242:CDS | 35.0% |
| ! | TTTTGTATAGGCCTATTTGC+AGG | + | chr4.1:14818607-14818626 | MS.gene09242:intron | 35.0% |
| !! | CTAAAGAAAGATGGATTGAG+AGG | + | chr4.1:14818741-14818760 | MS.gene09242:CDS | 35.0% |
| !! | GGACTTTTTGATAGCTTATG+AGG | + | chr4.1:14817301-14817320 | MS.gene09242:intron | 35.0% |
| !! | GTTGTTGTTGATAGCATAGA+AGG | - | chr4.1:14816584-14816603 | None:intergenic | 35.0% |
| !! | TTTTGGGTGTTTCTTGTTGA+AGG | - | chr4.1:14819135-14819154 | None:intergenic | 35.0% |
| !!! | ACTCACTTTTTTTGGTTGGA+AGG | - | chr4.1:14818132-14818151 | None:intergenic | 35.0% |
| !!! | AGGCATCGACAATTTTGATA+AGG | + | chr4.1:14818668-14818687 | MS.gene09242:CDS | 35.0% |
| !!! | CCGGGTTTTGGATTTTAATT+TGG | - | chr4.1:14816712-14816731 | None:intergenic | 35.0% |
| AAAATTGTCGATGCCTGCTA+TGG | - | chr4.1:14818664-14818683 | None:intergenic | 40.0% | |
| AGCTACACCTAAACACGTTA+AGG | + | chr4.1:14818832-14818851 | MS.gene09242:CDS | 40.0% | |
| AGTAGTAGGCATCAAACCAA+CGG | + | chr4.1:14818394-14818413 | MS.gene09242:CDS | 40.0% | |
| ATAAAGCTGACCAAGAGAGA+AGG | + | chr4.1:14816780-14816799 | MS.gene09242:CDS | 40.0% | |
| ATGCTACTAAAGGATGCCAA+AGG | - | chr4.1:14819493-14819512 | None:intergenic | 40.0% | |
| ATTTGCTTCGGAGGTTTGAA+AGG | + | chr4.1:14819580-14819599 | MS.gene09242:CDS | 40.0% | |
| CAAGGATCATCCAATGTGTA+TGG | - | chr4.1:14818269-14818288 | None:intergenic | 40.0% | |
| GATAAGCTAAACACTACTGC+AGG | + | chr4.1:14816875-14816894 | MS.gene09242:CDS | 40.0% | |
| GATCAAAGTTGCTTGCTCAA+AGG | - | chr4.1:14819638-14819657 | None:intergenic | 40.0% | |
| GCTGAAAACACAAACGGAAT+TGG | + | chr4.1:14819370-14819389 | MS.gene09242:CDS | 40.0% | |
| GGATTGAGAGGAAAGAGATT+GGG | + | chr4.1:14818753-14818772 | MS.gene09242:CDS | 40.0% | |
| TAAGTGGTAGAGTTATAGGC+TGG | + | chr4.1:14817280-14817299 | MS.gene09242:intron | 40.0% | |
| TACACATTGGATGATCCTTG+TGG | + | chr4.1:14818269-14818288 | MS.gene09242:CDS | 40.0% | |
| TACGTTCTTGAAACCATAGC+AGG | + | chr4.1:14818648-14818667 | MS.gene09242:CDS | 40.0% | |
| TAGTCTGGATATCAGTCCAA+TGG | + | chr4.1:14818080-14818099 | MS.gene09242:intron | 40.0% | |
| TCAGATACAGTCCTGCAAAT+AGG | - | chr4.1:14818621-14818640 | None:intergenic | 40.0% | |
| TCGTAGGAGAAACTTGAGTA+TGG | + | chr4.1:14819328-14819347 | MS.gene09242:intron | 40.0% | |
| TCGTGATCAATGTTCATAGC+TGG | - | chr4.1:14819283-14819302 | None:intergenic | 40.0% | |
| TGATGCTGTGGTAATACCTT+TGG | + | chr4.1:14819474-14819493 | MS.gene09242:CDS | 40.0% | |
| TGGATTGAGAGGAAAGAGAT+TGG | + | chr4.1:14818752-14818771 | MS.gene09242:CDS | 40.0% | |
| TGGGGCTATTATATTAGGGA+AGG | + | chr4.1:14816964-14816983 | MS.gene09242:CDS | 40.0% | |
| TGGTCACATTACAGGTCTAA+TGG | + | chr4.1:14817001-14817020 | MS.gene09242:CDS | 40.0% | |
| TGTGCAGAATCCATACACAT+TGG | + | chr4.1:14818256-14818275 | MS.gene09242:intron | 40.0% | |
| TGTTCCAGCAGGATATGAAA+AGG | + | chr4.1:14819543-14819562 | MS.gene09242:CDS | 40.0% | |
| TTAACTACACCTGCATCTCT+TGG | - | chr4.1:14816929-14816948 | None:intergenic | 40.0% | |
| TTCTTCAAAATCAGGCGAAG+AGG | + | chr4.1:14818951-14818970 | MS.gene09242:intron | 40.0% | |
| TTTGCTGCTACTGATATTGC+TGG | - | chr4.1:14818308-14818327 | None:intergenic | 40.0% | |
| TTTGCTTCGGAGGTTTGAAA+GGG | + | chr4.1:14819581-14819600 | MS.gene09242:CDS | 40.0% | |
| ! | AAGGGAGTGTAACTAGTAGA+AGG | - | chr4.1:14816565-14816584 | None:intergenic | 40.0% |
| ! | AATTGAGCATAGCCACCTTT+TGG | - | chr4.1:14818720-14818739 | None:intergenic | 40.0% |
| ! | AATTTGGTGACTGTGTCACT+TGG | + | chr4.1:14818326-14818345 | MS.gene09242:CDS | 40.0% |
| ! | ATTGAGCATAGCCACCTTTT+GGG | - | chr4.1:14818719-14818738 | None:intergenic | 40.0% |
| ! | CACCTAAGAAGAGATTAGTC+TGG | + | chr4.1:14818065-14818084 | MS.gene09242:intron | 40.0% |
| ! | CAGCCATTTGGAATTTGCTT+CGG | + | chr4.1:14819568-14819587 | MS.gene09242:CDS | 40.0% |
| ! | TCCAATACTCCTTTGAGAAC+CGG | - | chr4.1:14816731-14816750 | None:intergenic | 40.0% |
| ! | TGATCCTTTTCATATCCTGC+TGG | - | chr4.1:14819550-14819569 | None:intergenic | 40.0% |
| !! | AGCTTAAGAGGCTTTTTGAG+AGG | + | chr4.1:14817828-14817847 | MS.gene09242:intron | 40.0% |
| !! | TATCAGACTTTTAGAAGGCC+AGG | - | chr4.1:14817478-14817497 | None:intergenic | 40.0% |
| AAATATGGCAGGCCAGACTT+AGG | - | chr4.1:14817441-14817460 | None:intergenic | 45.0% | |
| AACCACTGAGCTTATAGGGA+TGG | + | chr4.1:14817383-14817402 | MS.gene09242:intron | 45.0% | |
| AACTTAAAAGGTCAGGCCAC+AGG | - | chr4.1:14817854-14817873 | None:intergenic | 45.0% | |
| ACAAACTGAACCACACCCAT+TGG | - | chr4.1:14817362-14817381 | None:intergenic | 45.0% | |
| ACCACTGAGCTTATAGGGAT+GGG | + | chr4.1:14817384-14817403 | MS.gene09242:intron | 45.0% | |
| ACTTCTAACTTTCGAAGGGG+AGG | - | chr4.1:14819670-14819689 | None:intergenic | 45.0% | |
| AGCTGTCCCAAAAAAGAGTG+AGG | + | chr4.1:14817223-14817242 | MS.gene09242:intron | 45.0% | |
| AGGGCATAAAATGGAGCCAT+CGG | - | chr4.1:14818360-14818379 | None:intergenic | 45.0% | |
| AGTAGCATACTTGCCATTGG+AGG | + | chr4.1:14819505-14819524 | MS.gene09242:CDS | 45.0% | |
| ATCCAAAACCCGGTTCTCAA+AGG | + | chr4.1:14816719-14816738 | MS.gene09242:CDS | 45.0% | |
| ATCTCCGCTGAACGCATTAA+TGG | + | chr4.1:14818015-14818034 | MS.gene09242:intron | 45.0% | |
| ATGTGACCACTCACTCAAAG+TGG | - | chr4.1:14816990-14817009 | None:intergenic | 45.0% | |
| CCTCCGAAGCAAATTCCAAA+TGG | - | chr4.1:14819574-14819593 | None:intergenic | 45.0% | |
| CTCACCATTAATGCGTTCAG+CGG | - | chr4.1:14818022-14818041 | None:intergenic | 45.0% | |
| CTGAACGCATTAATGGTGAG+GGG | + | chr4.1:14818022-14818041 | MS.gene09242:intron | 45.0% | |
| CTGCAGGCTGAAAACACAAA+CGG | + | chr4.1:14819364-14819383 | MS.gene09242:CDS | 45.0% | |
| CTTACAGTCGTGAAGCAAAC+TGG | - | chr4.1:14819201-14819220 | None:intergenic | 45.0% | |
| GAGCTTATAGGGATGGGAAT+AGG | + | chr4.1:14817390-14817409 | MS.gene09242:intron | 45.0% | |
| GATCCTTGTGGATCAAGTAG+TGG | + | chr4.1:14818281-14818300 | MS.gene09242:CDS | 45.0% | |
| GATTGAGAATCCACTAGCCA+AGG | - | chr4.1:14816606-14816625 | None:intergenic | 45.0% | |
| GCCTCTTAAGCTTATTAGGC+CGG | - | chr4.1:14817820-14817839 | None:intergenic | 45.0% | |
| GCTGAACGCATTAATGGTGA+GGG | + | chr4.1:14818021-14818040 | MS.gene09242:intron | 45.0% | |
| GCTGTCCCAAAAAAGAGTGA+GGG | + | chr4.1:14817224-14817243 | MS.gene09242:intron | 45.0% | |
| GGTTCTCTTTCAAGGTTGCA+TGG | + | chr4.1:14816815-14816834 | MS.gene09242:CDS | 45.0% | |
| GTGTAGTTCCAATTAGCCCA+AGG | + | chr4.1:14818438-14818457 | MS.gene09242:CDS | 45.0% | |
| TATAGGGATGGGAATAGGCT+AGG | + | chr4.1:14817395-14817414 | MS.gene09242:intron | 45.0% | |
| TCAACAACAACCTTGGCTAG+TGG | + | chr4.1:14816593-14816612 | MS.gene09242:CDS | 45.0% | |
| TCTGCTTGTGCTAATGCATC+TGG | - | chr4.1:14816761-14816780 | None:intergenic | 45.0% | |
| TGAAAGAGAACCAGGTGCTT+TGG | - | chr4.1:14816807-14816826 | None:intergenic | 45.0% | |
| TGAGTGAGTGGTCACATTAC+AGG | + | chr4.1:14816993-14817012 | MS.gene09242:CDS | 45.0% | |
| TGCAACCTTGAAAGAGAACC+AGG | - | chr4.1:14816815-14816834 | None:intergenic | 45.0% | |
| TGCTTCACCAGTGAAAAGCT+TGG | + | chr4.1:14819097-14819116 | MS.gene09242:CDS | 45.0% | |
| ! | AAGCACCTGGTTCTCTTTCA+AGG | + | chr4.1:14816807-14816826 | MS.gene09242:CDS | 45.0% |
| ! | ACATCTGCCAAGCTTTTCAC+TGG | - | chr4.1:14819107-14819126 | None:intergenic | 45.0% |
| ! | CCAATACTCCTTTGAGAACC+GGG | - | chr4.1:14816730-14816749 | None:intergenic | 45.0% |
| ! | CCATTTGGAATTTGCTTCGG+AGG | + | chr4.1:14819571-14819590 | MS.gene09242:CDS | 45.0% |
| ! | GCAGGTTCTTTTGCATTGCT+TGG | + | chr4.1:14816893-14816912 | MS.gene09242:CDS | 45.0% |
| ! | GCTTTCTTTGGAAGGCAAGT+TGG | - | chr4.1:14816652-14816671 | None:intergenic | 45.0% |
| ! | TCACTTGGTACTGAAACCGA+TGG | + | chr4.1:14818341-14818360 | MS.gene09242:CDS | 45.0% |
| ! | TTCCACTAGCTTCAGTCCAT+TGG | - | chr4.1:14818099-14818118 | None:intergenic | 45.0% |
| !! | ACTTTTAGAAGGCCAGGCTT+AGG | - | chr4.1:14817472-14817491 | None:intergenic | 45.0% |
| !! | GGCTAGTGGATTCTCAATCA+AGG | + | chr4.1:14816607-14816626 | MS.gene09242:CDS | 45.0% |
| !! | GGTTCTCAAAGGAGTATTGG+AGG | + | chr4.1:14816730-14816749 | MS.gene09242:CDS | 45.0% |
| !!! | ACTCTTTTTTGGGACAGCTC+TGG | - | chr4.1:14817222-14817241 | None:intergenic | 45.0% |
| AAGAGAGCTAGCACATGCTG+AGG | - | chr4.1:14816522-14816541 | None:intergenic | 50.0% | |
| ACCCAACTGTGTCTTGCCTT+GGG | - | chr4.1:14818457-14818476 | None:intergenic | 50.0% | |
| AGGTCTAATGGAGCTCCTAG+CGG | + | chr4.1:14817013-14817032 | MS.gene09242:CDS | 50.0% | |
| CACTCCAGGATAACCTCCAA+TGG | - | chr4.1:14819521-14819540 | None:intergenic | 50.0% | |
| CGCTGAACGCATTAATGGTG+AGG | + | chr4.1:14818020-14818039 | MS.gene09242:intron | 50.0% | |
| CTACTAGTGAGACCAACCGT+TGG | - | chr4.1:14818413-14818432 | None:intergenic | 50.0% | |
| CTTGCCATTGGAGGTTATCC+TGG | + | chr4.1:14819514-14819533 | MS.gene09242:CDS | 50.0% | |
| GAGAGGAAAGAGATTGGGAG+TGG | + | chr4.1:14818758-14818777 | MS.gene09242:CDS | 50.0% | |
| GCCGGCCTAATAAGCTTAAG+AGG | + | chr4.1:14817816-14817835 | MS.gene09242:intron | 50.0% | |
| GGTCCACTACTTGATCCACA+AGG | - | chr4.1:14818287-14818306 | None:intergenic | 50.0% | |
| GTAGGCATCAAACCAACGGT+TGG | + | chr4.1:14818398-14818417 | MS.gene09242:CDS | 50.0% | |
| GTGCTTTGGTCCTTCTCTCT+TGG | - | chr4.1:14816793-14816812 | None:intergenic | 50.0% | |
| GTGTCTTGCCTTGGGCTAAT+TGG | - | chr4.1:14818449-14818468 | None:intergenic | 50.0% | |
| TACCCAACTGTGTCTTGCCT+TGG | - | chr4.1:14818458-14818477 | None:intergenic | 50.0% | |
| TCAGTAGTGCCAAGAGATGC+AGG | + | chr4.1:14816917-14816936 | MS.gene09242:CDS | 50.0% | |
| TCCCATCCCTATAAGCTCAG+TGG | - | chr4.1:14817388-14817407 | None:intergenic | 50.0% | |
| TCTAACTTTCGAAGGGGAGG+TGG | - | chr4.1:14819667-14819686 | None:intergenic | 50.0% | |
| TGCTAGAGGTGGACAAGGAA+AGG | + | chr4.1:14817042-14817061 | MS.gene09242:CDS | 50.0% | |
| ! | CCCGGTTCTCAAAGGAGTAT+TGG | + | chr4.1:14816727-14816746 | MS.gene09242:CDS | 50.0% |
| ! | GTTGGTCTCACTAGTAGAGC+AGG | + | chr4.1:14818416-14818435 | MS.gene09242:CDS | 50.0% |
| !! | CTCCTTTGAGAACCGGGTTT+TGG | - | chr4.1:14816724-14816743 | None:intergenic | 50.0% |
| !! | GTCCAATGGACTGAAGCTAG+TGG | + | chr4.1:14818094-14818113 | MS.gene09242:intron | 50.0% |
| AACTGCGAAGTTCCCCGACA+AGG | - | chr4.1:14817993-14818012 | None:intergenic | 55.0% | |
| ACAAGGGATGGGAATAGGCC+AGG | - | chr4.1:14817976-14817995 | None:intergenic | 55.0% | |
| ACTGCGAAGTTCCCCGACAA+GGG | - | chr4.1:14817992-14818011 | None:intergenic | 55.0% | |
| AGCCCAAGGCAAGACACAGT+TGG | + | chr4.1:14818452-14818471 | MS.gene09242:CDS | 55.0% | |
| AGGCCAAGCTAGGCTTTGCA+AGG | + | chr4.1:14817415-14817434 | MS.gene09242:intron | 55.0% | |
| AGGCCTTGCAAAGCCTAGCT+TGG | - | chr4.1:14817421-14817440 | None:intergenic | 55.0% | |
| CAGCCTGCAGCATGAGATCT+TGG | - | chr4.1:14819354-14819373 | None:intergenic | 55.0% | |
| CCTATTCCCATCCCTTGTCG+GGG | + | chr4.1:14817978-14817997 | MS.gene09242:intron | 55.0% | |
| CCTGCTGGAACAATCACTCC+AGG | - | chr4.1:14819535-14819554 | None:intergenic | 55.0% | |
| CCTGGAGTGATTGTTCCAGC+AGG | + | chr4.1:14819532-14819551 | MS.gene09242:CDS | 55.0% | |
| CTAATGGAGCTCCTAGCGGT+TGG | + | chr4.1:14817017-14817036 | MS.gene09242:CDS | 55.0% | |
| GAAAAAAGTCTGGCCTGGCC+TGG | + | chr4.1:14817913-14817932 | MS.gene09242:intron | 55.0% | |
| GAAGTTCCCCGACAAGGGAT+GGG | - | chr4.1:14817987-14818006 | None:intergenic | 55.0% | |
| GCCCAAGGCAAGACACAGTT+GGG | + | chr4.1:14818453-14818472 | MS.gene09242:CDS | 55.0% | |
| GCCTATTCCCATCCCTTGTC+GGG | + | chr4.1:14817977-14817996 | MS.gene09242:intron | 55.0% | |
| GGAATAGGCTAGGCCAAGCT+AGG | + | chr4.1:14817405-14817424 | MS.gene09242:intron | 55.0% | |
| GGCCTATTCCCATCCCTTGT+CGG | + | chr4.1:14817976-14817995 | MS.gene09242:intron | 55.0% | |
| GGCTTTGCAAGGCCTAAGTC+TGG | + | chr4.1:14817426-14817445 | MS.gene09242:intron | 55.0% | |
| TGGCCAAGATCTCATGCTGC+AGG | + | chr4.1:14819348-14819367 | MS.gene09242:CDS | 55.0% | |
| ! | GAGAGAAGGACCAAAGCACC+TGG | + | chr4.1:14816794-14816813 | MS.gene09242:CDS | 55.0% |
| ! | GGAAGGCCACTTTGAGTGAG+TGG | + | chr4.1:14816981-14817000 | MS.gene09242:CDS | 55.0% |
| ! | TGGAGTGCTAGAGGTGGACA+AGG | + | chr4.1:14817037-14817056 | MS.gene09242:CDS | 55.0% |
| !! | GAGGCTTTTTGAGAGGCCTG+TGG | + | chr4.1:14817835-14817854 | MS.gene09242:intron | 55.0% |
| CCCCGACAAGGGATGGGAAT+AGG | - | chr4.1:14817981-14818000 | None:intergenic | 60.0% | |
| CCTCTAGCACTCCAACCGCT+AGG | - | chr4.1:14817031-14817050 | None:intergenic | 60.0% | |
| CGAAGTTCCCCGACAAGGGA+TGG | - | chr4.1:14817988-14818007 | None:intergenic | 60.0% | |
| ! | AGCGGTTGGAGTGCTAGAGG+TGG | + | chr4.1:14817031-14817050 | MS.gene09242:CDS | 60.0% |
| ! | CCTAGCGGTTGGAGTGCTAG+AGG | + | chr4.1:14817028-14817047 | MS.gene09242:CDS | 60.0% |
| AATAGGCCAGGCCGGCCTAC+AGG | - | chr4.1:14817964-14817983 | None:intergenic | 65.0% | |
| ATAGGCCAGGCCGGCCTACA+GGG | - | chr4.1:14817963-14817982 | None:intergenic | 65.0% | |
| CCTACGGCCTAGCCTACGAC+AGG | - | chr4.1:14817939-14817958 | None:intergenic | 65.0% | |
| CCTGTCGTAGGCTAGGCCGT+AGG | + | chr4.1:14817936-14817955 | MS.gene09242:intron | 65.0% | |
| GGGATGGGAATAGGCCAGGC+CGG | - | chr4.1:14817972-14817991 | None:intergenic | 65.0% | |
| AGCCTACGACAGGCCAGGCC+AGG | - | chr4.1:14817929-14817948 | None:intergenic | 70.0% | |
| GCTAGGCCGTAGGCCCCTGT+AGG | + | chr4.1:14817946-14817965 | MS.gene09242:intron | 70.0% | |
| GGCCTAGCCTACGACAGGCC+AGG | - | chr4.1:14817934-14817953 | None:intergenic | 70.0% | |
| GGCCTGGCCTGTCGTAGGCT+AGG | + | chr4.1:14817929-14817948 | MS.gene09242:intron | 70.0% | |
| TAGGCCAGGCCGGCCTACAG+GGG | - | chr4.1:14817962-14817981 | None:intergenic | 70.0% | |
| GGCCGGCCTACAGGGGCCTA+CGG | - | chr4.1:14817955-14817974 | None:intergenic | 75.0% | |
| GGCCGTAGGCCCCTGTAGGC+CGG | + | chr4.1:14817950-14817969 | MS.gene09242:intron | 75.0% | |
| GGCCTGGCCTGGCCTGTCGT+AGG | + | chr4.1:14817924-14817943 | MS.gene09242:intron | 75.0% | |
| TAGGCCCCTGTAGGCCGGCC+TGG | + | chr4.1:14817955-14817974 | MS.gene09242:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 14816515 | 14819693 | 14816515 | ID=MS.gene09242 |
| chr4.1 | mRNA | 14816515 | 14819693 | 14816515 | ID=MS.gene09242.t1;Parent=MS.gene09242 |
| chr4.1 | exon | 14816515 | 14817063 | 14816515 | ID=MS.gene09242.t1.exon1;Parent=MS.gene09242.t1 |
| chr4.1 | CDS | 14816515 | 14817063 | 14816515 | ID=cds.MS.gene09242.t1;Parent=MS.gene09242.t1 |
| chr4.1 | exon | 14818263 | 14818474 | 14818263 | ID=MS.gene09242.t1.exon2;Parent=MS.gene09242.t1 |
| chr4.1 | CDS | 14818263 | 14818474 | 14818263 | ID=cds.MS.gene09242.t1;Parent=MS.gene09242.t1 |
| chr4.1 | exon | 14818617 | 14818853 | 14818617 | ID=MS.gene09242.t1.exon3;Parent=MS.gene09242.t1 |
| chr4.1 | CDS | 14818617 | 14818853 | 14818617 | ID=cds.MS.gene09242.t1;Parent=MS.gene09242.t1 |
| chr4.1 | exon | 14818965 | 14819157 | 14818965 | ID=MS.gene09242.t1.exon4;Parent=MS.gene09242.t1 |
| chr4.1 | CDS | 14818965 | 14819157 | 14818965 | ID=cds.MS.gene09242.t1;Parent=MS.gene09242.t1 |
| chr4.1 | exon | 14819334 | 14819693 | 14819334 | ID=MS.gene09242.t1.exon5;Parent=MS.gene09242.t1 |
| chr4.1 | CDS | 14819334 | 14819693 | 14819334 | ID=cds.MS.gene09242.t1;Parent=MS.gene09242.t1 |
| Gene Sequence |
| Protein sequence |
