Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09270.t1 | XP_003629610.1 | 93.2 | 518 | 2 | 1 | 1 | 518 | 1 | 485 | 9.60E-277 | 962.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09270.t1 | P93253 | 86.5 | 518 | 37 | 1 | 1 | 518 | 1 | 485 | 2.8e-261 | 902.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09270.t1 | Q84RD9 | 93.2 | 518 | 2 | 1 | 1 | 518 | 1 | 485 | 6.9e-277 | 962.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059364 | MS.gene09270 | 0.837175 | 6.07E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09270.t1 | MTR_8g083090 | 93.243 | 518 | 2 | 1 | 1 | 518 | 1 | 485 | 0.0 | 985 |
| MS.gene09270.t1 | MTR_3g084340 | 85.135 | 518 | 44 | 1 | 1 | 518 | 1 | 485 | 0.0 | 895 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09270.t1 | AT4G13940 | 83.784 | 518 | 51 | 1 | 1 | 518 | 1 | 485 | 0.0 | 887 |
| MS.gene09270.t1 | AT3G23810 | 83.012 | 518 | 55 | 1 | 1 | 518 | 1 | 485 | 0.0 | 877 |
| MS.gene09270.t1 | AT4G13940 | 75.097 | 518 | 51 | 2 | 1 | 518 | 1 | 440 | 0.0 | 781 |
| MS.gene09270.t1 | AT4G13940 | 81.061 | 396 | 42 | 1 | 123 | 518 | 2 | 364 | 0.0 | 668 |
| MS.gene09270.t1 | AT4G13940 | 80.938 | 341 | 32 | 1 | 1 | 341 | 1 | 308 | 0.0 | 547 |
Find 171 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTTAGTTCCTGGATTT+TGG | 0.221859 | 4.1:+14502058 | MS.gene09270:CDS |
| GGCTCTCATGGAAGGTTTCC+AGG | 0.251177 | 4.1:+14502335 | MS.gene09270:CDS |
| GTGAAGAGATCCGGTGATTC+TGG | 0.281598 | 4.1:-14500981 | None:intergenic |
| GTGGGTGTTGTCTGTGGATA+TGG | 0.293422 | 4.1:+14502225 | MS.gene09270:CDS |
| CGAGGGTCGTTTGATGAACT+TGG | 0.298869 | 4.1:+14502608 | MS.gene09270:CDS |
| GTACTGAACGTGCTCTTGAC+TGG | 0.316338 | 4.1:+14501176 | MS.gene09270:CDS |
| TTGAAGAGTCTCACCCTTCC+AGG | 0.334073 | 4.1:-14501140 | None:intergenic |
| GGTGATTCTGGCACCTTTGA+AGG | 0.335113 | 4.1:-14500969 | None:intergenic |
| ATGAACTTGGGTTGTGCTAC+TGG | 0.335401 | 4.1:+14502621 | MS.gene09270:CDS |
| ATGATGCCGGTGTTGGTCTC+AGG | 0.349022 | 4.1:-14502576 | None:intergenic |
| GATCTTTCCCAAGCCGATTT+CGG | 0.352407 | 4.1:+14500869 | MS.gene09270:CDS |
| ATCGAAACCCTAACCGCTTT+AGG | 0.353133 | 4.1:+14501028 | MS.gene09270:CDS |
| GCTACTGATGTTATGATTGC+TGG | 0.358771 | 4.1:+14502198 | MS.gene09270:CDS |
| TGATCCAATCTGTGCCCTTC+AGG | 0.361459 | 4.1:+14502314 | MS.gene09270:CDS |
| CTGTAGTGAGCGGGCTTGTA+TGG | 0.374543 | 4.1:-14502864 | None:intergenic |
| CCTGTCGGTTTGAGGCTTGA+TGG | 0.375154 | 4.1:-14502544 | None:intergenic |
| TTCTGGCACCTTTGAAGGGT+TGG | 0.375945 | 4.1:-14500964 | None:intergenic |
| GAGTCCGGGCATCTCGATTT+CGG | 0.376850 | 4.1:-14500912 | None:intergenic |
| CTTCAGCACCTAAAGCGGTT+AGG | 0.385562 | 4.1:-14501036 | None:intergenic |
| AAATGAAAATAAACAAATCT+AGG | 0.387114 | 4.1:-14501556 | None:intergenic |
| GATGATGTGAATTTAGTTCC+TGG | 0.389167 | 4.1:+14502051 | MS.gene09270:CDS |
| CATGATGATGTCCTTGTTAC+CGG | 0.390795 | 4.1:-14502409 | None:intergenic |
| TACTGAACGTGCTCTTGACT+GGG | 0.392027 | 4.1:+14501177 | MS.gene09270:CDS |
| TCTGGCACCTTTGAAGGGTT+GGG | 0.392418 | 4.1:-14500963 | None:intergenic |
| CGTGCTCTTGACTGGGGTCC+AGG | 0.395326 | 4.1:+14501184 | MS.gene09270:CDS |
| GCACTTCATCTTGGCAAGCT+TGG | 0.402551 | 4.1:+14502780 | MS.gene09270:CDS |
| ACAGCGCCGCCGTCTTCGCC+TGG | 0.403265 | 4.1:+14501122 | MS.gene09270:CDS |
| CTGTGCCCTTCAGGCTCTCA+TGG | 0.405295 | 4.1:+14502323 | MS.gene09270:CDS |
| TAACAGTTTGACAATTTGTA+TGG | 0.407584 | 4.1:+14502141 | MS.gene09270:intron |
| CTGGCCGTGAGTACAAGGTT+AGG | 0.409733 | 4.1:+14500846 | MS.gene09270:CDS |
| CTTGTACTCACGGCCAGCTT+GGG | 0.411653 | 4.1:-14500840 | None:intergenic |
| GTCACGAGCGATGGCGGCGG+CGG | 0.418277 | 4.1:-14501101 | None:intergenic |
| CGCCGCCGTCTTCGCCTGGA+AGG | 0.420226 | 4.1:+14501126 | MS.gene09270:CDS |
| TTTCGATGAGGACGGCGGTT+TGG | 0.421389 | 4.1:-14501012 | None:intergenic |
| GACAATGAAATTGATATGTC+TGG | 0.422786 | 4.1:+14502489 | MS.gene09270:CDS |
| TTGTGGAATGAGAGGAAATC+TGG | 0.425669 | 4.1:+14502702 | MS.gene09270:CDS |
| TTCAGCACCTAAAGCGGTTA+GGG | 0.426813 | 4.1:-14501035 | None:intergenic |
| GGCTTGTATGGACCCTCAAC+TGG | 0.426904 | 4.1:-14502852 | None:intergenic |
| TTGAGTTGAGAAAATGTTGC+AGG | 0.426919 | 4.1:-14501071 | None:intergenic |
| CTTGACTGGGGTCCAGGTGG+TGG | 0.427852 | 4.1:+14501190 | MS.gene09270:CDS |
| ACGAGCTCCAGCTTGCTTCA+AGG | 0.428897 | 4.1:-14502274 | None:intergenic |
| AATGCCATTGTTTGCAACAT+TGG | 0.434082 | 4.1:+14502459 | MS.gene09270:CDS |
| GTTGATCCACGAAGGTGTTA+AGG | 0.434225 | 4.1:+14501252 | MS.gene09270:CDS |
| AGTTCGGCAGGACATGAGTC+CGG | 0.444561 | 4.1:-14500927 | None:intergenic |
| ATGTCCTGCCGAACTGAGTT+CGG | 0.451578 | 4.1:+14500935 | MS.gene09270:CDS |
| TGATGTAATCAGCCTGTGAT+TGG | 0.451589 | 4.1:-14502824 | None:intergenic |
| CTTCAGCCTTAACACCTTCG+TGG | 0.456708 | 4.1:-14501258 | None:intergenic |
| GCCCTTCAGGCTCTCATGGA+AGG | 0.462937 | 4.1:+14502327 | MS.gene09270:CDS |
| GCTGTTGCCTTGAAGCAAGC+TGG | 0.466153 | 4.1:+14502267 | MS.gene09270:CDS |
| CCTTGTACTCACGGCCAGCT+TGG | 0.467412 | 4.1:-14500841 | None:intergenic |
| CGGCATCATTGTCTTGGCCG+AGG | 0.467549 | 4.1:+14502590 | MS.gene09270:CDS |
| CATCATCAAGAGTCAGAACC+TGG | 0.474414 | 4.1:-14502353 | None:intergenic |
| TACATCAGTGTGCCAGTTGA+GGG | 0.474583 | 4.1:+14502840 | MS.gene09270:CDS |
| GAGCGATGGCGGCGGCGGCG+TGG | 0.480226 | 4.1:-14501096 | None:intergenic |
| TTAACAAAGTTAGGTGTTTG+CGG | 0.481513 | 4.1:+14502014 | MS.gene09270:intron |
| AAAACCCACCTGTCGGTTTG+AGG | 0.483314 | 4.1:-14502552 | None:intergenic |
| GAGCAGGACATCACAAAACT+AGG | 0.485567 | 4.1:-14502648 | None:intergenic |
| CCAAGCTGGCCGTGAGTACA+AGG | 0.485905 | 4.1:+14500841 | MS.gene09270:CDS |
| GTGCTTACTATCATTAGAGA+TGG | 0.486117 | 4.1:+14501346 | MS.gene09270:CDS |
| GAGTCGGCCGAAATCGGCTT+GGG | 0.486792 | 4.1:-14500876 | None:intergenic |
| GTCTGTGGATATGGAGATGT+TGG | 0.487898 | 4.1:+14502234 | MS.gene09270:CDS |
| GATGAGGACGGCGGTTTGGA+TGG | 0.488837 | 4.1:-14501008 | None:intergenic |
| AAGATGAAGGATAGACTTGT+TGG | 0.490166 | 4.1:+14501397 | MS.gene09270:CDS |
| GCCTAAGCATCTTGATGAGA+AGG | 0.497581 | 4.1:+14502752 | MS.gene09270:CDS |
| ATCTGGAAAGTATGAGAAGA+AGG | 0.498460 | 4.1:+14502719 | MS.gene09270:CDS |
| TTCAAAGGTGCCAGAATCAC+CGG | 0.500231 | 4.1:+14500971 | MS.gene09270:CDS |
| TTCATCTTACGATACCTCTC+AGG | 0.500485 | 4.1:-14501382 | None:intergenic |
| AGAGCCTGAAGGGCACAGAT+TGG | 0.501229 | 4.1:-14502318 | None:intergenic |
| TGCTTACTATCATTAGAGAT+GGG | 0.504002 | 4.1:+14501347 | MS.gene09270:CDS |
| TGGTCCGAACTCAGTTCGGC+AGG | 0.506633 | 4.1:-14500939 | None:intergenic |
| AAGGTGGCTGCACTTCATCT+TGG | 0.508177 | 4.1:+14502771 | MS.gene09270:CDS |
| ATGGTGACGCGCTTCACACC+AGG | 0.509074 | 4.1:-14502525 | None:intergenic |
| AGACTACTACTGGTGTTAAG+AGG | 0.510864 | 4.1:+14501431 | MS.gene09270:CDS |
| CGAGTCGGCCGAAATCGGCT+TGG | 0.511178 | 4.1:-14500877 | None:intergenic |
| CATACAAGCCCGCTCACTAC+AGG | 0.511416 | 4.1:+14502865 | MS.gene09270:CDS |
| GGGATGGTCCGAACTCAGTT+CGG | 0.513848 | 4.1:-14500943 | None:intergenic |
| GGCGCTGTCACGAGCGATGG+CGG | 0.513966 | 4.1:-14501107 | None:intergenic |
| TGGCCGTGAGTACAAGGTTA+GGG | 0.514832 | 4.1:+14500847 | MS.gene09270:CDS |
| GATCTCGAGTCGGCCGAAAT+CGG | 0.518878 | 4.1:-14500882 | None:intergenic |
| GTTCGGCAGGACATGAGTCC+GGG | 0.520546 | 4.1:-14500926 | None:intergenic |
| TGATGTTATGATTGCTGGAA+AGG | 0.524488 | 4.1:+14502203 | MS.gene09270:CDS |
| GTGATTCTGGCACCTTTGAA+GGG | 0.527036 | 4.1:-14500968 | None:intergenic |
| GCACCTTTGAAGGGTTGGGA+TGG | 0.527296 | 4.1:-14500959 | None:intergenic |
| GACATCTTTGTTACCACCAC+CGG | 0.528009 | 4.1:+14502390 | MS.gene09270:CDS |
| GAGGGTCGTTTGATGAACTT+GGG | 0.529037 | 4.1:+14502609 | MS.gene09270:CDS |
| CAAGACAATGATGCCGGTGT+TGG | 0.531085 | 4.1:-14502583 | None:intergenic |
| GTGAGACTCTTCAAGAGTAT+TGG | 0.531338 | 4.1:+14501149 | MS.gene09270:CDS |
| CAACACCGGCATCATTGTCT+TGG | 0.531574 | 4.1:+14502584 | MS.gene09270:CDS |
| GAGTCGTTGACATTAATAGC+AGG | 0.532386 | 4.1:-14501490 | None:intergenic |
| GCTGTCACGAGCGATGGCGG+CGG | 0.534560 | 4.1:-14501104 | None:intergenic |
| CACTTCCCGATGGTTTGATG+AGG | 0.537448 | 4.1:+14502175 | MS.gene09270:CDS |
| GTCCTGCTCCTTCACCAACC+AGG | 0.539452 | 4.1:+14502662 | MS.gene09270:CDS |
| GATGTCCTTGTTACCGGTGG+TGG | 0.541620 | 4.1:-14502403 | None:intergenic |
| TGATGCCGGTGTTGGTCTCA+GGG | 0.542982 | 4.1:-14502575 | None:intergenic |
| CTTTAGGTGCTGAAGTCCGT+TGG | 0.543805 | 4.1:+14501044 | MS.gene09270:CDS |
| TTATCAGTAGAACTTGGATC+AGG | 0.545116 | 4.1:-14501307 | None:intergenic |
| GGCATCATTGTCTTGGCCGA+GGG | 0.546680 | 4.1:+14502591 | MS.gene09270:CDS |
| GAAGAACTTTATGAGAAGAC+TGG | 0.546774 | 4.1:+14501277 | MS.gene09270:CDS |
| CCATCGTCAACAATCAAGTC+AGG | 0.547026 | 4.1:-14501214 | None:intergenic |
| AGACTCTTCAAGAGTATTGG+TGG | 0.548092 | 4.1:+14501152 | MS.gene09270:CDS |
| TCAGCGTTATCAGTAGAACT+TGG | 0.550511 | 4.1:-14501313 | None:intergenic |
| ATCAAGTCAGGACCACCACC+TGG | 0.553340 | 4.1:-14501202 | None:intergenic |
| TTACATCAGTGTGCCAGTTG+AGG | 0.554609 | 4.1:+14502839 | MS.gene09270:CDS |
| CACCAAGCTTTCCCAATCAC+AGG | 0.556789 | 4.1:+14502812 | MS.gene09270:CDS |
| CTCGGCCAAGACAATGATGC+CGG | 0.557327 | 4.1:-14502589 | None:intergenic |
| GTAGCCCTCATCAAACCATC+GGG | 0.557790 | 4.1:-14502180 | None:intergenic |
| GATGTAATCAGCCTGTGATT+GGG | 0.561747 | 4.1:-14502823 | None:intergenic |
| AGCCTGTGATTGGGAAAGCT+TGG | 0.562267 | 4.1:-14502814 | None:intergenic |
| TCATTGCTCAGCTTGAGTTG+TGG | 0.563092 | 4.1:+14502685 | MS.gene09270:CDS |
| CAAGTTCATCAAACGACCCT+CGG | 0.565126 | 4.1:-14502607 | None:intergenic |
| GTTATGATTGCTGGAAAGGT+GGG | 0.565954 | 4.1:+14502207 | MS.gene09270:CDS |
| AGTAGCCCTCATCAAACCAT+CGG | 0.569406 | 4.1:-14502181 | None:intergenic |
| ACCACTGTACACCAAAATCC+AGG | 0.569476 | 4.1:-14502069 | None:intergenic |
| TCTCAATACCTGTAGTGAGC+GGG | 0.569862 | 4.1:-14502873 | None:intergenic |
| ACCTTCCATGAGAGCCTGAA+GGG | 0.569942 | 4.1:-14502328 | None:intergenic |
| TGTTACCACCACCGGTAACA+AGG | 0.571856 | 4.1:+14502398 | MS.gene09270:CDS |
| CTTTATCAGATGCAAGCTAG+TGG | 0.573265 | 4.1:+14501454 | MS.gene09270:CDS |
| TGCCGTCACTCACTTCCCGA+TGG | 0.573321 | 4.1:+14502165 | MS.gene09270:CDS |
| GATGGTCATGTGAAGAGATC+CGG | 0.575220 | 4.1:-14500990 | None:intergenic |
| GGCGGCGCTGTCACGAGCGA+TGG | 0.576329 | 4.1:-14501110 | None:intergenic |
| GACCTGGTTGGTGAAGGAGC+AGG | 0.578362 | 4.1:-14502664 | None:intergenic |
| TGAGAGGTATCGTAAGATGA+AGG | 0.581482 | 4.1:+14501384 | MS.gene09270:CDS |
| CTCACCCTTCCAGGCGAAGA+CGG | 0.582229 | 4.1:-14501131 | None:intergenic |
| TTGGCCGAAATCGAGATGCC+CGG | 0.583401 | 4.1:+14500908 | MS.gene09270:CDS |
| GGAAAGGTGGGTGTTGTCTG+TGG | 0.584558 | 4.1:+14502219 | MS.gene09270:CDS |
| AGCTTGAGTTGTGGAATGAG+AGG | 0.585507 | 4.1:+14502694 | MS.gene09270:CDS |
| ACCTTCTCATCAAGATGCTT+AGG | 0.585589 | 4.1:-14502753 | None:intergenic |
| GCCGCCGTCTTCGCCTGGAA+GGG | 0.586397 | 4.1:+14501127 | MS.gene09270:CDS |
| TCATCATGGTTGACGACATG+AGG | 0.586533 | 4.1:+14502424 | MS.gene09270:CDS |
| CCATCAAGCCTCAAACCGAC+AGG | 0.586572 | 4.1:+14502544 | MS.gene09270:CDS |
| GGACCATCCCAACCCTTCAA+AGG | 0.588552 | 4.1:+14500956 | MS.gene09270:CDS |
| GTGACCAATGTTGCAAACAA+TGG | 0.589198 | 4.1:-14502463 | None:intergenic |
| CGGTAACAAGGACATCATCA+TGG | 0.591464 | 4.1:+14502410 | MS.gene09270:CDS |
| TGTTATGATTGCTGGAAAGG+TGG | 0.598138 | 4.1:+14502206 | MS.gene09270:CDS |
| AACCTTCCATGAGAGCCTGA+AGG | 0.599013 | 4.1:-14502329 | None:intergenic |
| TCAAGCCTCAAACCGACAGG+TGG | 0.599721 | 4.1:+14502547 | MS.gene09270:CDS |
| ACAGTAGAGAAAACCCAAGC+TGG | 0.601142 | 4.1:+14500827 | MS.gene09270:CDS |
| GATCCCTAACCTTGTACTCA+CGG | 0.602852 | 4.1:-14500850 | None:intergenic |
| ACTTCCCGATGGTTTGATGA+GGG | 0.603102 | 4.1:+14502176 | MS.gene09270:CDS |
| AGCAATGACCTGGTTGGTGA+AGG | 0.606777 | 4.1:-14502670 | None:intergenic |
| GTTTCTGAAGAGACTACTAC+TGG | 0.608136 | 4.1:+14501421 | MS.gene09270:CDS |
| CTCTCAATACCTGTAGTGAG+CGG | 0.610233 | 4.1:-14502874 | None:intergenic |
| CGACTCTGTTACCAAGAGCA+AGG | 0.612040 | 4.1:+14501507 | MS.gene09270:CDS |
| CGGCCGACTCGAGATCGAGT+TGG | 0.613698 | 4.1:+14500889 | MS.gene09270:CDS |
| ACTCAAGCTGAGCAATGACC+TGG | 0.617464 | 4.1:-14502680 | None:intergenic |
| AGCAGGACATCACAAAACTA+GGG | 0.618545 | 4.1:-14502647 | None:intergenic |
| AACCATCGGGAAGTGAGTGA+CGG | 0.619456 | 4.1:-14502167 | None:intergenic |
| ACCCTTCCAGGCGAAGACGG+CGG | 0.621848 | 4.1:-14501128 | None:intergenic |
| GGTTAGGGTTTCGATGAGGA+CGG | 0.624245 | 4.1:-14501020 | None:intergenic |
| CTCAGGGAAAACCCACCTGT+CGG | 0.631363 | 4.1:-14502559 | None:intergenic |
| AAATGTTGCAGGAACACCAA+CGG | 0.640245 | 4.1:-14501060 | None:intergenic |
| GGATATGGAGATGTTGGAAA+GGG | 0.640627 | 4.1:+14502240 | MS.gene09270:CDS |
| TGGATATGGAGATGTTGGAA+AGG | 0.645644 | 4.1:+14502239 | MS.gene09270:CDS |
| CAAGCCTCAAACCGACAGGT+GGG | 0.648729 | 4.1:+14502548 | MS.gene09270:CDS |
| TAAGCATCTTGATGAGAAGG+TGG | 0.649946 | 4.1:+14502755 | MS.gene09270:CDS |
| ACGGACTTCAGCACCTAAAG+CGG | 0.651771 | 4.1:-14501041 | None:intergenic |
| AGTCGTTGACATTAATAGCA+GGG | 0.657078 | 4.1:-14501489 | None:intergenic |
| GCTCTTGACTGGGGTCCAGG+TGG | 0.660501 | 4.1:+14501187 | MS.gene09270:CDS |
| TCTGGACTTGAGAACTACCC+TGG | 0.662161 | 4.1:+14502507 | MS.gene09270:CDS |
| CGGCCAACTCGATCTCGAGT+CGG | 0.664458 | 4.1:-14500892 | None:intergenic |
| ACTTTATGAGAAGACTGGTG+AGG | 0.668763 | 4.1:+14501282 | MS.gene09270:CDS |
| GACTTGATTGTTGACGATGG+TGG | 0.670668 | 4.1:+14501217 | MS.gene09270:CDS |
| CCTGACTTGATTGTTGACGA+TGG | 0.671777 | 4.1:+14501214 | MS.gene09270:CDS |
| TAGGGTTTCGATGAGGACGG+CGG | 0.676084 | 4.1:-14501017 | None:intergenic |
| AAGCTGAGCAATGACCTGGT+TGG | 0.688031 | 4.1:-14502676 | None:intergenic |
| TGGTGACGCGCTTCACACCA+GGG | 0.688289 | 4.1:-14502524 | None:intergenic |
| ACTGAACGTGCTCTTGACTG+GGG | 0.690263 | 4.1:+14501178 | MS.gene09270:CDS |
| GGTTGAAGACTGATCCTGAG+AGG | 0.700893 | 4.1:+14501368 | MS.gene09270:CDS |
| GATGATGTCCTTGTTACCGG+TGG | 0.708198 | 4.1:-14502406 | None:intergenic |
| AAGCGGTTAGGGTTTCGATG+AGG | 0.719864 | 4.1:-14501024 | None:intergenic |
| GCTACTTTGTTGATCCACGA+AGG | 0.723062 | 4.1:+14501244 | MS.gene09270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAATATTTTGATCT+GGG | + | chr4.1:14501578-14501597 | MS.gene09270:intron | 10.0% |
| !!! | TTTTTTAAAATATTTTGATC+TGG | + | chr4.1:14501577-14501596 | MS.gene09270:intron | 10.0% |
| !! | AAATGAAAATAAACAAATCT+AGG | - | chr4.1:14501559-14501578 | None:intergenic | 15.0% |
| !!! | TTTTAAAATATTTTGATCTG+GGG | + | chr4.1:14501579-14501598 | MS.gene09270:intron | 15.0% |
| !! | TAGATATTGGATTTGATAAA+TGG | + | chr4.1:14501889-14501908 | MS.gene09270:intron | 20.0% |
| ! | AGTTAACTATGATGTGAATT+TGG | + | chr4.1:14501953-14501972 | MS.gene09270:intron | 25.0% |
| ! | ATCTTGGATTTAACAAAGTT+AGG | + | chr4.1:14502005-14502024 | MS.gene09270:intron | 25.0% |
| ! | TAACAGTTTGACAATTTGTA+TGG | + | chr4.1:14502141-14502160 | MS.gene09270:intron | 25.0% |
| ! | TTACAAAACCATAGATCAAA+TGG | - | chr4.1:14502124-14502143 | None:intergenic | 25.0% |
| !! | TGTGAATTTGGTTGTATTTT+TGG | + | chr4.1:14501965-14501984 | MS.gene09270:intron | 25.0% |
| !!! | TGAAATTGAGTATTTGGTTT+TGG | + | chr4.1:14501790-14501809 | MS.gene09270:intron | 25.0% |
| AAAAAAACAAACCTTGCTCT+TGG | - | chr4.1:14501521-14501540 | None:intergenic | 30.0% | |
| ATTTATGCTTCTTCATGTGT+TGG | + | chr4.1:14501618-14501637 | MS.gene09270:intron | 30.0% | |
| CAGGACATTTATCAAACAAT+TGG | - | chr4.1:14501821-14501840 | None:intergenic | 30.0% | |
| GACAATGAAATTGATATGTC+TGG | + | chr4.1:14502489-14502508 | MS.gene09270:CDS | 30.0% | |
| GTAGTGTGAAATTGAGTATT+TGG | + | chr4.1:14501784-14501803 | MS.gene09270:intron | 30.0% | |
| TAAATGTCCTGAATGAAGTT+TGG | + | chr4.1:14501830-14501849 | MS.gene09270:intron | 30.0% | |
| TCATTCACAAAACTTCATTC+AGG | - | chr4.1:14501757-14501776 | None:intergenic | 30.0% | |
| TGCTTACTATCATTAGAGAT+GGG | + | chr4.1:14501347-14501366 | MS.gene09270:CDS | 30.0% | |
| TTAACAAAGTTAGGTGTTTG+CGG | + | chr4.1:14502014-14502033 | MS.gene09270:intron | 30.0% | |
| TTAGTGTGAAATTGAGTGTT+GGG | + | chr4.1:14501701-14501720 | MS.gene09270:intron | 30.0% | |
| TTTAGTGTGAAATTGAGTGT+TGG | + | chr4.1:14501700-14501719 | MS.gene09270:intron | 30.0% | |
| ! | TGTGTTGTTGTATGTTATTG+AGG | + | chr4.1:14501666-14501685 | MS.gene09270:intron | 30.0% |
| !! | TGAATTTAGTTCCTGGATTT+TGG | + | chr4.1:14502058-14502077 | MS.gene09270:CDS | 30.0% |
| !!! | ACTATAGCATGTTTTGATCT+TGG | + | chr4.1:14501989-14502008 | MS.gene09270:intron | 30.0% |
| AAGATGAAGGATAGACTTGT+TGG | + | chr4.1:14501397-14501416 | MS.gene09270:CDS | 35.0% | |
| AATGCCATTGTTTGCAACAT+TGG | + | chr4.1:14502459-14502478 | MS.gene09270:CDS | 35.0% | |
| ACACATACCAAACTTCATTC+AGG | - | chr4.1:14501840-14501859 | None:intergenic | 35.0% | |
| AGTCGTTGACATTAATAGCA+GGG | - | chr4.1:14501492-14501511 | None:intergenic | 35.0% | |
| GAAGAACTTTATGAGAAGAC+TGG | + | chr4.1:14501277-14501296 | MS.gene09270:CDS | 35.0% | |
| GTGCTTACTATCATTAGAGA+TGG | + | chr4.1:14501346-14501365 | MS.gene09270:CDS | 35.0% | |
| TGATGTTATGATTGCTGGAA+AGG | + | chr4.1:14502203-14502222 | MS.gene09270:CDS | 35.0% | |
| TTATCAGTAGAACTTGGATC+AGG | - | chr4.1:14501310-14501329 | None:intergenic | 35.0% | |
| TTCTGTAAGATACGTTTGTG+TGG | + | chr4.1:14501926-14501945 | MS.gene09270:intron | 35.0% | |
| ! | ATCTGGAAAGTATGAGAAGA+AGG | + | chr4.1:14502719-14502738 | MS.gene09270:CDS | 35.0% |
| ! | GATGATGTGAATTTAGTTCC+TGG | + | chr4.1:14502051-14502070 | MS.gene09270:CDS | 35.0% |
| ! | TCTGTTTGCCATTTGATCTA+TGG | + | chr4.1:14502113-14502132 | MS.gene09270:intron | 35.0% |
| !! | CTTCTTCATGTGTTGGTTTA+GGG | + | chr4.1:14501625-14501644 | MS.gene09270:intron | 35.0% |
| !! | TTGAGTTGAGAAAATGTTGC+AGG | - | chr4.1:14501074-14501093 | None:intergenic | 35.0% |
| !!! | TGAAATTGAGTGTTGGGTTT+TGG | + | chr4.1:14501707-14501726 | MS.gene09270:intron | 35.0% |
| AAATGTTGCAGGAACACCAA+CGG | - | chr4.1:14501063-14501082 | None:intergenic | 40.0% | |
| ACCTTCTCATCAAGATGCTT+AGG | - | chr4.1:14502756-14502775 | None:intergenic | 40.0% | |
| ACTTTATGAGAAGACTGGTG+AGG | + | chr4.1:14501282-14501301 | MS.gene09270:CDS | 40.0% | |
| AGCAGGACATCACAAAACTA+GGG | - | chr4.1:14502650-14502669 | None:intergenic | 40.0% | |
| CTTTATCAGATGCAAGCTAG+TGG | + | chr4.1:14501454-14501473 | MS.gene09270:CDS | 40.0% | |
| GAGTCGTTGACATTAATAGC+AGG | - | chr4.1:14501493-14501512 | None:intergenic | 40.0% | |
| GATGTAATCAGCCTGTGATT+GGG | - | chr4.1:14502826-14502845 | None:intergenic | 40.0% | |
| GCTACTGATGTTATGATTGC+TGG | + | chr4.1:14502198-14502217 | MS.gene09270:CDS | 40.0% | |
| GGATATGGAGATGTTGGAAA+GGG | + | chr4.1:14502240-14502259 | MS.gene09270:CDS | 40.0% | |
| GTGACCAATGTTGCAAACAA+TGG | - | chr4.1:14502466-14502485 | None:intergenic | 40.0% | |
| GTTATGATTGCTGGAAAGGT+GGG | + | chr4.1:14502207-14502226 | MS.gene09270:CDS | 40.0% | |
| TAAGCATCTTGATGAGAAGG+TGG | + | chr4.1:14502755-14502774 | MS.gene09270:CDS | 40.0% | |
| TCAGCGTTATCAGTAGAACT+TGG | - | chr4.1:14501316-14501335 | None:intergenic | 40.0% | |
| TGATGTAATCAGCCTGTGAT+TGG | - | chr4.1:14502827-14502846 | None:intergenic | 40.0% | |
| TGGATATGGAGATGTTGGAA+AGG | + | chr4.1:14502239-14502258 | MS.gene09270:CDS | 40.0% | |
| TGTTATGATTGCTGGAAAGG+TGG | + | chr4.1:14502206-14502225 | MS.gene09270:CDS | 40.0% | |
| TTCATCTTACGATACCTCTC+AGG | - | chr4.1:14501385-14501404 | None:intergenic | 40.0% | |
| TTGTGGAATGAGAGGAAATC+TGG | + | chr4.1:14502702-14502721 | MS.gene09270:CDS | 40.0% | |
| ! | AGACTACTACTGGTGTTAAG+AGG | + | chr4.1:14501431-14501450 | MS.gene09270:CDS | 40.0% |
| ! | CATGATGATGTCCTTGTTAC+CGG | - | chr4.1:14502412-14502431 | None:intergenic | 40.0% |
| ! | GTGAGACTCTTCAAGAGTAT+TGG | + | chr4.1:14501149-14501168 | MS.gene09270:CDS | 40.0% |
| ! | GTTTCTGAAGAGACTACTAC+TGG | + | chr4.1:14501421-14501440 | MS.gene09270:CDS | 40.0% |
| !! | AGACTCTTCAAGAGTATTGG+TGG | + | chr4.1:14501152-14501171 | MS.gene09270:CDS | 40.0% |
| !! | GCTTCTTCATGTGTTGGTTT+AGG | + | chr4.1:14501624-14501643 | MS.gene09270:intron | 40.0% |
| !! | TGAGAGGTATCGTAAGATGA+AGG | + | chr4.1:14501384-14501403 | MS.gene09270:CDS | 40.0% |
| ACAGTAGAGAAAACCCAAGC+TGG | + | chr4.1:14500827-14500846 | MS.gene09270:CDS | 45.0% | |
| ACCACTGTACACCAAAATCC+AGG | - | chr4.1:14502072-14502091 | None:intergenic | 45.0% | |
| ACTTCCCGATGGTTTGATGA+GGG | + | chr4.1:14502176-14502195 | MS.gene09270:CDS | 45.0% | |
| AGTAGCCCTCATCAAACCAT+CGG | - | chr4.1:14502184-14502203 | None:intergenic | 45.0% | |
| ATCGAAACCCTAACCGCTTT+AGG | + | chr4.1:14501028-14501047 | MS.gene09270:CDS | 45.0% | |
| CAAGTTCATCAAACGACCCT+CGG | - | chr4.1:14502610-14502629 | None:intergenic | 45.0% | |
| CATCATCAAGAGTCAGAACC+TGG | - | chr4.1:14502356-14502375 | None:intergenic | 45.0% | |
| CCATCGTCAACAATCAAGTC+AGG | - | chr4.1:14501217-14501236 | None:intergenic | 45.0% | |
| CGGTAACAAGGACATCATCA+TGG | + | chr4.1:14502410-14502429 | MS.gene09270:CDS | 45.0% | |
| GACATCTTTGTTACCACCAC+CGG | + | chr4.1:14502390-14502409 | MS.gene09270:CDS | 45.0% | |
| GACTTGATTGTTGACGATGG+TGG | + | chr4.1:14501217-14501236 | MS.gene09270:CDS | 45.0% | |
| GAGCAGGACATCACAAAACT+AGG | - | chr4.1:14502651-14502670 | None:intergenic | 45.0% | |
| GAGGGTCGTTTGATGAACTT+GGG | + | chr4.1:14502609-14502628 | MS.gene09270:CDS | 45.0% | |
| GATCCCTAACCTTGTACTCA+CGG | - | chr4.1:14500853-14500872 | None:intergenic | 45.0% | |
| GATGGTCATGTGAAGAGATC+CGG | - | chr4.1:14500993-14501012 | None:intergenic | 45.0% | |
| GCCTAAGCATCTTGATGAGA+AGG | + | chr4.1:14502752-14502771 | MS.gene09270:CDS | 45.0% | |
| GTCTGTGGATATGGAGATGT+TGG | + | chr4.1:14502234-14502253 | MS.gene09270:CDS | 45.0% | |
| GTGATTCTGGCACCTTTGAA+GGG | - | chr4.1:14500971-14500990 | None:intergenic | 45.0% | |
| GTGTTCGAATGATGCAGCTA+GGG | + | chr4.1:14501864-14501883 | MS.gene09270:intron | 45.0% | |
| TACATCAGTGTGCCAGTTGA+GGG | + | chr4.1:14502840-14502859 | MS.gene09270:CDS | 45.0% | |
| TACTGAACGTGCTCTTGACT+GGG | + | chr4.1:14501177-14501196 | MS.gene09270:CDS | 45.0% | |
| TCATCATGGTTGACGACATG+AGG | + | chr4.1:14502424-14502443 | MS.gene09270:CDS | 45.0% | |
| TGCAGCTAGGGTGTAGATAT+TGG | + | chr4.1:14501876-14501895 | MS.gene09270:intron | 45.0% | |
| TGTGTTCGAATGATGCAGCT+AGG | + | chr4.1:14501863-14501882 | MS.gene09270:intron | 45.0% | |
| TTACATCAGTGTGCCAGTTG+AGG | + | chr4.1:14502839-14502858 | MS.gene09270:CDS | 45.0% | |
| TTCAGCACCTAAAGCGGTTA+GGG | - | chr4.1:14501038-14501057 | None:intergenic | 45.0% | |
| ! | AGCTTGAGTTGTGGAATGAG+AGG | + | chr4.1:14502694-14502713 | MS.gene09270:CDS | 45.0% |
| ! | ATGAACTTGGGTTGTGCTAC+TGG | + | chr4.1:14502621-14502640 | MS.gene09270:CDS | 45.0% |
| ! | CCTGACTTGATTGTTGACGA+TGG | + | chr4.1:14501214-14501233 | MS.gene09270:CDS | 45.0% |
| ! | GATCTTTCCCAAGCCGATTT+CGG | + | chr4.1:14500869-14500888 | MS.gene09270:CDS | 45.0% |
| ! | GCTACTTTGTTGATCCACGA+AGG | + | chr4.1:14501244-14501263 | MS.gene09270:CDS | 45.0% |
| ! | TCATTGCTCAGCTTGAGTTG+TGG | + | chr4.1:14502685-14502704 | MS.gene09270:CDS | 45.0% |
| !! | GTTGATCCACGAAGGTGTTA+AGG | + | chr4.1:14501252-14501271 | MS.gene09270:CDS | 45.0% |
| !! | TCCTGGATTTTGGTGTACAG+TGG | + | chr4.1:14502068-14502087 | MS.gene09270:CDS | 45.0% |
| !! | TTCAAAGGTGCCAGAATCAC+CGG | + | chr4.1:14500971-14500990 | MS.gene09270:CDS | 45.0% |
| AACCATCGGGAAGTGAGTGA+CGG | - | chr4.1:14502170-14502189 | None:intergenic | 50.0% | |
| AACCTTCCATGAGAGCCTGA+AGG | - | chr4.1:14502332-14502351 | None:intergenic | 50.0% | |
| AAGCGGTTAGGGTTTCGATG+AGG | - | chr4.1:14501027-14501046 | None:intergenic | 50.0% | |
| AAGCTGAGCAATGACCTGGT+TGG | - | chr4.1:14502679-14502698 | None:intergenic | 50.0% | |
| AAGGTGGCTGCACTTCATCT+TGG | + | chr4.1:14502771-14502790 | MS.gene09270:CDS | 50.0% | |
| ACCTTCCATGAGAGCCTGAA+GGG | - | chr4.1:14502331-14502350 | None:intergenic | 50.0% | |
| ACGGACTTCAGCACCTAAAG+CGG | - | chr4.1:14501044-14501063 | None:intergenic | 50.0% | |
| ACTCAAGCTGAGCAATGACC+TGG | - | chr4.1:14502683-14502702 | None:intergenic | 50.0% | |
| ACTGAACGTGCTCTTGACTG+GGG | + | chr4.1:14501178-14501197 | MS.gene09270:CDS | 50.0% | |
| AGCCTGTGATTGGGAAAGCT+TGG | - | chr4.1:14502817-14502836 | None:intergenic | 50.0% | |
| ATGTCCTGCCGAACTGAGTT+CGG | + | chr4.1:14500935-14500954 | MS.gene09270:CDS | 50.0% | |
| CAACACCGGCATCATTGTCT+TGG | + | chr4.1:14502584-14502603 | MS.gene09270:CDS | 50.0% | |
| CAAGACAATGATGCCGGTGT+TGG | - | chr4.1:14502586-14502605 | None:intergenic | 50.0% | |
| CACCAAGCTTTCCCAATCAC+AGG | + | chr4.1:14502812-14502831 | MS.gene09270:CDS | 50.0% | |
| CACTTCCCGATGGTTTGATG+AGG | + | chr4.1:14502175-14502194 | MS.gene09270:CDS | 50.0% | |
| CGACTCTGTTACCAAGAGCA+AGG | + | chr4.1:14501507-14501526 | MS.gene09270:CDS | 50.0% | |
| CGAGGGTCGTTTGATGAACT+TGG | + | chr4.1:14502608-14502627 | MS.gene09270:CDS | 50.0% | |
| CTTCAGCACCTAAAGCGGTT+AGG | - | chr4.1:14501039-14501058 | None:intergenic | 50.0% | |
| CTTCAGCCTTAACACCTTCG+TGG | - | chr4.1:14501261-14501280 | None:intergenic | 50.0% | |
| GATGATGTCCTTGTTACCGG+TGG | - | chr4.1:14502409-14502428 | None:intergenic | 50.0% | |
| GCACTTCATCTTGGCAAGCT+TGG | + | chr4.1:14502780-14502799 | MS.gene09270:CDS | 50.0% | |
| GGTGATTCTGGCACCTTTGA+AGG | - | chr4.1:14500972-14500991 | None:intergenic | 50.0% | |
| GGTTAGGGTTTCGATGAGGA+CGG | - | chr4.1:14501023-14501042 | None:intergenic | 50.0% | |
| GGTTGAAGACTGATCCTGAG+AGG | + | chr4.1:14501368-14501387 | MS.gene09270:CDS | 50.0% | |
| GTACTGAACGTGCTCTTGAC+TGG | + | chr4.1:14501176-14501195 | MS.gene09270:CDS | 50.0% | |
| GTAGCCCTCATCAAACCATC+GGG | - | chr4.1:14502183-14502202 | None:intergenic | 50.0% | |
| GTGAAGAGATCCGGTGATTC+TGG | - | chr4.1:14500984-14501003 | None:intergenic | 50.0% | |
| TCTGGACTTGAGAACTACCC+TGG | + | chr4.1:14502507-14502526 | MS.gene09270:CDS | 50.0% | |
| TGATCCAATCTGTGCCCTTC+AGG | + | chr4.1:14502314-14502333 | MS.gene09270:CDS | 50.0% | |
| TGGCCGTGAGTACAAGGTTA+GGG | + | chr4.1:14500847-14500866 | MS.gene09270:CDS | 50.0% | |
| TGTTACCACCACCGGTAACA+AGG | + | chr4.1:14502398-14502417 | MS.gene09270:CDS | 50.0% | |
| TTGAAGAGTCTCACCCTTCC+AGG | - | chr4.1:14501143-14501162 | None:intergenic | 50.0% | |
| ! | GTGGGTGTTGTCTGTGGATA+TGG | + | chr4.1:14502225-14502244 | MS.gene09270:CDS | 50.0% |
| ! | GTTTTCCCTGAGACCAACAC+CGG | + | chr4.1:14502570-14502589 | MS.gene09270:CDS | 50.0% |
| ! | TCTGGCACCTTTGAAGGGTT+GGG | - | chr4.1:14500966-14500985 | None:intergenic | 50.0% |
| ! | TTCTGGCACCTTTGAAGGGT+TGG | - | chr4.1:14500967-14500986 | None:intergenic | 50.0% |
| !! | AAAACCCACCTGTCGGTTTG+AGG | - | chr4.1:14502555-14502574 | None:intergenic | 50.0% |
| !! | AGCAATGACCTGGTTGGTGA+AGG | - | chr4.1:14502673-14502692 | None:intergenic | 50.0% |
| !! | CTTTAGGTGCTGAAGTCCGT+TGG | + | chr4.1:14501044-14501063 | MS.gene09270:CDS | 50.0% |
| AGTTCGGCAGGACATGAGTC+CGG | - | chr4.1:14500930-14500949 | None:intergenic | 55.0% | |
| ATCAAGTCAGGACCACCACC+TGG | - | chr4.1:14501205-14501224 | None:intergenic | 55.0% | |
| CAAGCCTCAAACCGACAGGT+GGG | + | chr4.1:14502548-14502567 | MS.gene09270:CDS | 55.0% | |
| CATACAAGCCCGCTCACTAC+AGG | + | chr4.1:14502865-14502884 | MS.gene09270:CDS | 55.0% | |
| CCATCAAGCCTCAAACCGAC+AGG | + | chr4.1:14502544-14502563 | MS.gene09270:CDS | 55.0% | |
| CTCAGGGAAAACCCACCTGT+CGG | - | chr4.1:14502562-14502581 | None:intergenic | 55.0% | |
| CTCGGCCAAGACAATGATGC+CGG | - | chr4.1:14502592-14502611 | None:intergenic | 55.0% | |
| CTGGCCGTGAGTACAAGGTT+AGG | + | chr4.1:14500846-14500865 | MS.gene09270:CDS | 55.0% | |
| CTTGTACTCACGGCCAGCTT+GGG | - | chr4.1:14500843-14500862 | None:intergenic | 55.0% | |
| GAGTCCGGGCATCTCGATTT+CGG | - | chr4.1:14500915-14500934 | None:intergenic | 55.0% | |
| GATCTCGAGTCGGCCGAAAT+CGG | - | chr4.1:14500885-14500904 | None:intergenic | 55.0% | |
| GATGTCCTTGTTACCGGTGG+TGG | - | chr4.1:14502406-14502425 | None:intergenic | 55.0% | |
| GCTGTTGCCTTGAAGCAAGC+TGG | + | chr4.1:14502267-14502286 | MS.gene09270:CDS | 55.0% | |
| GGACCATCCCAACCCTTCAA+AGG | + | chr4.1:14500956-14500975 | MS.gene09270:CDS | 55.0% | |
| GGCATCATTGTCTTGGCCGA+GGG | + | chr4.1:14502591-14502610 | MS.gene09270:CDS | 55.0% | |
| GGCTCTCATGGAAGGTTTCC+AGG | + | chr4.1:14502335-14502354 | MS.gene09270:CDS | 55.0% | |
| GGCTTGTATGGACCCTCAAC+TGG | - | chr4.1:14502855-14502874 | None:intergenic | 55.0% | |
| GGGATGGTCCGAACTCAGTT+CGG | - | chr4.1:14500946-14500965 | None:intergenic | 55.0% | |
| TAGGGTTTCGATGAGGACGG+CGG | - | chr4.1:14501020-14501039 | None:intergenic | 55.0% | |
| TCAAGCCTCAAACCGACAGG+TGG | + | chr4.1:14502547-14502566 | MS.gene09270:CDS | 55.0% | |
| TTGGCCGAAATCGAGATGCC+CGG | + | chr4.1:14500908-14500927 | MS.gene09270:CDS | 55.0% | |
| TTTCGATGAGGACGGCGGTT+TGG | - | chr4.1:14501015-14501034 | None:intergenic | 55.0% | |
| ! | ACGAGCTCCAGCTTGCTTCA+AGG | - | chr4.1:14502277-14502296 | None:intergenic | 55.0% |
| ! | AGAGCCTGAAGGGCACAGAT+TGG | - | chr4.1:14502321-14502340 | None:intergenic | 55.0% |
| ! | CTGTAGTGAGCGGGCTTGTA+TGG | - | chr4.1:14502867-14502886 | None:intergenic | 55.0% |
| ! | GCACCTTTGAAGGGTTGGGA+TGG | - | chr4.1:14500962-14500981 | None:intergenic | 55.0% |
| ! | GGAAAGGTGGGTGTTGTCTG+TGG | + | chr4.1:14502219-14502238 | MS.gene09270:CDS | 55.0% |
| !! | ATGATGCCGGTGTTGGTCTC+AGG | - | chr4.1:14502579-14502598 | None:intergenic | 55.0% |
| !! | CCTGTCGGTTTGAGGCTTGA+TGG | - | chr4.1:14502547-14502566 | None:intergenic | 55.0% |
| !! | TGATGCCGGTGTTGGTCTCA+GGG | - | chr4.1:14502578-14502597 | None:intergenic | 55.0% |
| CCAAGCTGGCCGTGAGTACA+AGG | + | chr4.1:14500841-14500860 | MS.gene09270:CDS | 60.0% | |
| CCTTGTACTCACGGCCAGCT+TGG | - | chr4.1:14500844-14500863 | None:intergenic | 60.0% | |
| CGGCATCATTGTCTTGGCCG+AGG | + | chr4.1:14502590-14502609 | MS.gene09270:CDS | 60.0% | |
| CGGCCAACTCGATCTCGAGT+CGG | - | chr4.1:14500895-14500914 | None:intergenic | 60.0% | |
| CTCACCCTTCCAGGCGAAGA+CGG | - | chr4.1:14501134-14501153 | None:intergenic | 60.0% | |
| CTGTGCCCTTCAGGCTCTCA+TGG | + | chr4.1:14502323-14502342 | MS.gene09270:CDS | 60.0% | |
| GCCCTTCAGGCTCTCATGGA+AGG | + | chr4.1:14502327-14502346 | MS.gene09270:CDS | 60.0% | |
| GTCCTGCTCCTTCACCAACC+AGG | + | chr4.1:14502662-14502681 | MS.gene09270:CDS | 60.0% | |
| GTTCGGCAGGACATGAGTCC+GGG | - | chr4.1:14500929-14500948 | None:intergenic | 60.0% | |
| TGCCGTCACTCACTTCCCGA+TGG | + | chr4.1:14502165-14502184 | MS.gene09270:CDS | 60.0% | |
| TGGTCCGAACTCAGTTCGGC+AGG | - | chr4.1:14500942-14500961 | None:intergenic | 60.0% | |
| ! | ATGGTGACGCGCTTCACACC+AGG | - | chr4.1:14502528-14502547 | None:intergenic | 60.0% |
| ! | GAGTCGGCCGAAATCGGCTT+GGG | - | chr4.1:14500879-14500898 | None:intergenic | 60.0% |
| ! | GATGAGGACGGCGGTTTGGA+TGG | - | chr4.1:14501011-14501030 | None:intergenic | 60.0% |
| ! | TGGTGACGCGCTTCACACCA+GGG | - | chr4.1:14502527-14502546 | None:intergenic | 60.0% |
| !! | GACCTGGTTGGTGAAGGAGC+AGG | - | chr4.1:14502667-14502686 | None:intergenic | 60.0% |
| ACCCTTCCAGGCGAAGACGG+CGG | - | chr4.1:14501131-14501150 | None:intergenic | 65.0% | |
| CGAGTCGGCCGAAATCGGCT+TGG | - | chr4.1:14500880-14500899 | None:intergenic | 65.0% | |
| CGTGCTCTTGACTGGGGTCC+AGG | + | chr4.1:14501184-14501203 | MS.gene09270:CDS | 65.0% | |
| CTTGACTGGGGTCCAGGTGG+TGG | + | chr4.1:14501190-14501209 | MS.gene09270:CDS | 65.0% | |
| GCTCTTGACTGGGGTCCAGG+TGG | + | chr4.1:14501187-14501206 | MS.gene09270:CDS | 65.0% | |
| !! | CGGCCGACTCGAGATCGAGT+TGG | + | chr4.1:14500889-14500908 | MS.gene09270:CDS | 65.0% |
| GCCGCCGTCTTCGCCTGGAA+GGG | + | chr4.1:14501127-14501146 | MS.gene09270:CDS | 70.0% | |
| GGCGCTGTCACGAGCGATGG+CGG | - | chr4.1:14501110-14501129 | None:intergenic | 70.0% | |
| ! | GCTGTCACGAGCGATGGCGG+CGG | - | chr4.1:14501107-14501126 | None:intergenic | 70.0% |
| ACAGCGCCGCCGTCTTCGCC+TGG | + | chr4.1:14501122-14501141 | MS.gene09270:CDS | 75.0% | |
| CGCCGCCGTCTTCGCCTGGA+AGG | + | chr4.1:14501126-14501145 | MS.gene09270:CDS | 75.0% | |
| GGCGGCGCTGTCACGAGCGA+TGG | - | chr4.1:14501113-14501132 | None:intergenic | 75.0% | |
| ! | GTCACGAGCGATGGCGGCGG+CGG | - | chr4.1:14501104-14501123 | None:intergenic | 75.0% |
| !! | GAGCGATGGCGGCGGCGGCG+TGG | - | chr4.1:14501099-14501118 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 14500818 | 14502893 | 14500818 | ID=MS.gene09270 |
| chr4.1 | mRNA | 14500818 | 14502893 | 14500818 | ID=MS.gene09270.t1;Parent=MS.gene09270 |
| chr4.1 | exon | 14500818 | 14501564 | 14500818 | ID=MS.gene09270.t1.exon1;Parent=MS.gene09270.t1 |
| chr4.1 | CDS | 14500818 | 14501564 | 14500818 | ID=cds.MS.gene09270.t1;Parent=MS.gene09270.t1 |
| chr4.1 | exon | 14502027 | 14502089 | 14502027 | ID=MS.gene09270.t1.exon2;Parent=MS.gene09270.t1 |
| chr4.1 | CDS | 14502027 | 14502089 | 14502027 | ID=cds.MS.gene09270.t1;Parent=MS.gene09270.t1 |
| chr4.1 | exon | 14502147 | 14502893 | 14502147 | ID=MS.gene09270.t1.exon3;Parent=MS.gene09270.t1 |
| chr4.1 | CDS | 14502147 | 14502893 | 14502147 | ID=cds.MS.gene09270.t1;Parent=MS.gene09270.t1 |
| Gene Sequence |
| Protein sequence |
