Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059364.t1 | XP_003629610.1 | 100 | 237 | 0 | 0 | 1 | 237 | 1 | 237 | 3.10E-132 | 481.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059364.t1 | P50246 | 92.0 | 237 | 19 | 0 | 1 | 237 | 1 | 237 | 1.6e-126 | 453.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059364.t1 | Q84RD9 | 100.0 | 237 | 0 | 0 | 1 | 237 | 1 | 237 | 2.2e-132 | 481.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene059362 | MS.gene059364 | 0.908795 | 1.16E-81 | -1.69E-46 |
MS.gene059364 | MS.gene071711 | 0.921378 | 3.86E-88 | -1.69E-46 |
MS.gene059364 | MS.gene08168 | 0.83804 | 3.64E-57 | -1.69E-46 |
MS.gene059364 | MS.gene09270 | 0.837175 | 6.07E-57 | -1.69E-46 |
MS.gene059364 | MS.gene41773 | 0.826681 | 2.37E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059364.t1 | MTR_8g083090 | 100.000 | 237 | 0 | 0 | 1 | 237 | 1 | 237 | 2.72e-175 | 491 |
MS.gene059364.t1 | MTR_3g084340 | 91.139 | 237 | 21 | 0 | 1 | 237 | 1 | 237 | 1.86e-153 | 436 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059364.t1 | AT4G13940 | 89.451 | 237 | 25 | 0 | 1 | 237 | 1 | 237 | 9.63e-154 | 431 |
MS.gene059364.t1 | AT4G13940 | 89.451 | 237 | 25 | 0 | 1 | 237 | 1 | 237 | 1.60e-152 | 433 |
MS.gene059364.t1 | AT3G23810 | 87.764 | 237 | 29 | 0 | 1 | 237 | 1 | 237 | 8.45e-148 | 421 |
MS.gene059364.t1 | AT4G13940 | 70.464 | 237 | 25 | 1 | 1 | 237 | 1 | 192 | 6.53e-110 | 323 |
MS.gene059364.t1 | AT4G13940 | 86.087 | 115 | 16 | 0 | 123 | 237 | 2 | 116 | 5.31e-68 | 214 |
Find 82 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTACTGAACGTGCTCTTGAC+TGG | 0.316338 | 4.2:-13238863 | MS.gene059364:CDS |
TTGAAGAGTCTCACCCTTCC+AGG | 0.334073 | 4.2:+13238899 | None:intergenic |
TTCATCTTACGATACCTCTT+AGG | 0.348879 | 4.2:+13238657 | None:intergenic |
GATCTTTCCCAAGCCGATTT+CGG | 0.352407 | 4.2:-13239170 | MS.gene059364:CDS |
ATCGAAACCCTAACCGCTTT+AGG | 0.353133 | 4.2:-13239011 | MS.gene059364:CDS |
GGTGATTCTTGCACCTTTGA+AGG | 0.359405 | 4.2:+13239070 | None:intergenic |
GAGTCCGGGCATCTCGATTT+CGG | 0.376850 | 4.2:+13239127 | None:intergenic |
TTCTTGCACCTTTGAAGGGT+TGG | 0.381461 | 4.2:+13239075 | None:intergenic |
CTTCAGCACCTAAAGCGGTT+AGG | 0.385562 | 4.2:+13239003 | None:intergenic |
TACTGAACGTGCTCTTGACT+GGG | 0.392027 | 4.2:-13238862 | MS.gene059364:CDS |
TCTTGCACCTTTGAAGGGTT+GGG | 0.392418 | 4.2:+13239076 | None:intergenic |
CGTGCTCTTGACTGGGGTCC+AGG | 0.395326 | 4.2:-13238855 | MS.gene059364:CDS |
ACAGCGCCGCCGTCTTCGCC+TGG | 0.403265 | 4.2:-13238917 | MS.gene059364:CDS |
CTGGCCGTGAGTACAAGGTT+AGG | 0.409733 | 4.2:-13239193 | MS.gene059364:CDS |
CTTGTACTCACGGCCAGCTT+GGG | 0.411653 | 4.2:+13239199 | None:intergenic |
GTCACGAGCGATGGCGGCGG+CGG | 0.418277 | 4.2:+13238938 | None:intergenic |
CGCCGCCGTCTTCGCCTGGA+AGG | 0.420226 | 4.2:-13238913 | MS.gene059364:CDS |
TTTCGATGAGGACGGCGGTT+TGG | 0.421389 | 4.2:+13239027 | None:intergenic |
TTCAGCACCTAAAGCGGTTA+GGG | 0.426813 | 4.2:+13239004 | None:intergenic |
TTGAGTTGAGAAAATGTTGC+AGG | 0.426919 | 4.2:+13238968 | None:intergenic |
CTTGACTGGGGTCCAGGTGG+TGG | 0.427852 | 4.2:-13238849 | MS.gene059364:CDS |
GTTGATCCACGAAGGTGTTA+AGG | 0.434225 | 4.2:-13238787 | MS.gene059364:CDS |
AGTTCGGCAGGACATGAGTC+CGG | 0.444561 | 4.2:+13239112 | None:intergenic |
ATGTCCTGCCGAACTGAGTT+CGG | 0.451578 | 4.2:-13239104 | MS.gene059364:CDS |
CTTCAGCCTTAACACCTTCG+TGG | 0.456708 | 4.2:+13238781 | None:intergenic |
CCTTGTACTCACGGCCAGCT+TGG | 0.467412 | 4.2:+13239198 | None:intergenic |
GAGCGATGGCGGCGGCGGCG+TGG | 0.480226 | 4.2:+13238943 | None:intergenic |
CCAAGCTGGCCGTGAGTACA+AGG | 0.485905 | 4.2:-13239198 | MS.gene059364:CDS |
GTGCTTACTATCATTAGAGA+TGG | 0.486117 | 4.2:-13238693 | MS.gene059364:CDS |
GAGTCGGCCGAAATCGGCTT+GGG | 0.486792 | 4.2:+13239163 | None:intergenic |
GATGAGGACGGCGGTTTGGA+TGG | 0.488837 | 4.2:+13239031 | None:intergenic |
AAGATGAAGGATAGACTTGT+TGG | 0.490166 | 4.2:-13238642 | MS.gene059364:CDS |
TGCTTACTATCATTAGAGAT+GGG | 0.504002 | 4.2:-13238692 | MS.gene059364:CDS |
TGGTCCGAACTCAGTTCGGC+AGG | 0.506633 | 4.2:+13239100 | None:intergenic |
GCACCTTTGAAGGGTTGGGA+TGG | 0.510136 | 4.2:+13239080 | None:intergenic |
GTGATTCTTGCACCTTTGAA+GGG | 0.510838 | 4.2:+13239071 | None:intergenic |
AGACTACTACTGGTGTTAAG+AGG | 0.510864 | 4.2:-13238608 | MS.gene059364:CDS |
CGAGTCGGCCGAAATCGGCT+TGG | 0.511178 | 4.2:+13239162 | None:intergenic |
GGGATGGTCCGAACTCAGTT+CGG | 0.513848 | 4.2:+13239096 | None:intergenic |
GGCGCTGTCACGAGCGATGG+CGG | 0.513966 | 4.2:+13238932 | None:intergenic |
TGGCCGTGAGTACAAGGTTA+GGG | 0.514832 | 4.2:-13239192 | MS.gene059364:CDS |
GATCTCGAGTCGGCCGAAAT+CGG | 0.518878 | 4.2:+13239157 | None:intergenic |
GTTCGGCAGGACATGAGTCC+GGG | 0.520546 | 4.2:+13239113 | None:intergenic |
GTGAGACTCTTCAAGAGTAT+TGG | 0.531338 | 4.2:-13238890 | MS.gene059364:CDS |
GAGTCGTTGACATTAATAGC+AGG | 0.532386 | 4.2:+13238549 | None:intergenic |
GCTGTCACGAGCGATGGCGG+CGG | 0.534560 | 4.2:+13238935 | None:intergenic |
TTCAAAGGTGCAAGAATCAC+CGG | 0.538038 | 4.2:-13239068 | MS.gene059364:CDS |
CTTTAGGTGCTGAAGTCCGT+TGG | 0.543805 | 4.2:-13238995 | MS.gene059364:CDS |
TTATCAGTAGAACTTGGATC+AGG | 0.545116 | 4.2:+13238732 | None:intergenic |
GAAGAACTTTATGAGAAGAC+TGG | 0.546774 | 4.2:-13238762 | MS.gene059364:CDS |
CCATCGTCAACAATCAAGTC+AGG | 0.547026 | 4.2:+13238825 | None:intergenic |
AGACTCTTCAAGAGTATTGG+TGG | 0.548092 | 4.2:-13238887 | MS.gene059364:CDS |
TCAGCGTTATCAGTAGAACT+TGG | 0.550511 | 4.2:+13238726 | None:intergenic |
ATCAAGTCAGGACCACCACC+TGG | 0.553340 | 4.2:+13238837 | None:intergenic |
CTTTATCAGATGCAAGCTAG+TGG | 0.573265 | 4.2:-13238585 | MS.gene059364:CDS |
GATGGTCATGTGAAGAGATC+CGG | 0.575220 | 4.2:+13239049 | None:intergenic |
GGTTGAAGACTGATCCTAAG+AGG | 0.575943 | 4.2:-13238671 | MS.gene059364:CDS |
GGCGGCGCTGTCACGAGCGA+TGG | 0.576329 | 4.2:+13238929 | None:intergenic |
TAAGAGGTATCGTAAGATGA+AGG | 0.581482 | 4.2:-13238655 | MS.gene059364:CDS |
CTCACCCTTCCAGGCGAAGA+CGG | 0.582229 | 4.2:+13238908 | None:intergenic |
TTGGCCGAAATCGAGATGCC+CGG | 0.583401 | 4.2:-13239131 | MS.gene059364:CDS |
GCCGCCGTCTTCGCCTGGAA+GGG | 0.586397 | 4.2:-13238912 | MS.gene059364:CDS |
GGACCATCCCAACCCTTCAA+AGG | 0.588552 | 4.2:-13239083 | MS.gene059364:CDS |
ACAGTAGAGAAAACCCAAGC+TGG | 0.601142 | 4.2:-13239212 | MS.gene059364:CDS |
GATCCCTAACCTTGTACTCA+CGG | 0.602852 | 4.2:+13239189 | None:intergenic |
GTTTCTGAAGAGACTACTAC+TGG | 0.608136 | 4.2:-13238618 | MS.gene059364:CDS |
CGACTCTGTTACCAAGAGCA+AGG | 0.612040 | 4.2:-13238532 | MS.gene059364:CDS |
CGGCCGACTCGAGATCGAGT+TGG | 0.613698 | 4.2:-13239150 | MS.gene059364:CDS |
ACCCTTCCAGGCGAAGACGG+CGG | 0.621848 | 4.2:+13238911 | None:intergenic |
GGTTAGGGTTTCGATGAGGA+CGG | 0.624245 | 4.2:+13239019 | None:intergenic |
AAATGTTGCAGGAACACCAA+CGG | 0.640245 | 4.2:+13238979 | None:intergenic |
ACGGACTTCAGCACCTAAAG+CGG | 0.651771 | 4.2:+13238998 | None:intergenic |
AGTCGTTGACATTAATAGCA+GGG | 0.657078 | 4.2:+13238550 | None:intergenic |
GCTCTTGACTGGGGTCCAGG+TGG | 0.660501 | 4.2:-13238852 | MS.gene059364:CDS |
CGGCCAACTCGATCTCGAGT+CGG | 0.664458 | 4.2:+13239147 | None:intergenic |
ACTTTATGAGAAGACTGGTG+AGG | 0.668763 | 4.2:-13238757 | MS.gene059364:CDS |
GACTTGATTGTTGACGATGG+TGG | 0.670668 | 4.2:-13238822 | MS.gene059364:CDS |
CCTGACTTGATTGTTGACGA+TGG | 0.671777 | 4.2:-13238825 | MS.gene059364:CDS |
TAGGGTTTCGATGAGGACGG+CGG | 0.676084 | 4.2:+13239022 | None:intergenic |
ACTGAACGTGCTCTTGACTG+GGG | 0.690263 | 4.2:-13238861 | MS.gene059364:CDS |
AAGCGGTTAGGGTTTCGATG+AGG | 0.719864 | 4.2:+13239015 | None:intergenic |
GCTACTTTGTTGATCCACGA+AGG | 0.723062 | 4.2:-13238795 | MS.gene059364:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AAAAAAACAAACCTTGCTCT+TGG | + | chr4.2:13239209-13239228 | None:intergenic | 30.0% | |
TGCTTACTATCATTAGAGAT+GGG | - | chr4.2:13239035-13239054 | MS.gene059364:CDS | 30.0% | |
AAGATGAAGGATAGACTTGT+TGG | - | chr4.2:13239085-13239104 | MS.gene059364:CDS | 35.0% | |
AGTCGTTGACATTAATAGCA+GGG | + | chr4.2:13239180-13239199 | None:intergenic | 35.0% | |
GAAGAACTTTATGAGAAGAC+TGG | - | chr4.2:13238965-13238984 | MS.gene059364:CDS | 35.0% | |
GTGCTTACTATCATTAGAGA+TGG | - | chr4.2:13239034-13239053 | MS.gene059364:CDS | 35.0% | |
TTATCAGTAGAACTTGGATC+AGG | + | chr4.2:13238998-13239017 | None:intergenic | 35.0% | |
TTCATCTTACGATACCTCTT+AGG | + | chr4.2:13239073-13239092 | None:intergenic | 35.0% | |
!! | TAAGAGGTATCGTAAGATGA+AGG | - | chr4.2:13239072-13239091 | MS.gene059364:CDS | 35.0% |
!! | TTGAGTTGAGAAAATGTTGC+AGG | + | chr4.2:13238762-13238781 | None:intergenic | 35.0% |
AAATGTTGCAGGAACACCAA+CGG | + | chr4.2:13238751-13238770 | None:intergenic | 40.0% | |
ACTTTATGAGAAGACTGGTG+AGG | - | chr4.2:13238970-13238989 | MS.gene059364:CDS | 40.0% | |
CTTTATCAGATGCAAGCTAG+TGG | - | chr4.2:13239142-13239161 | MS.gene059364:CDS | 40.0% | |
GAGTCGTTGACATTAATAGC+AGG | + | chr4.2:13239181-13239200 | None:intergenic | 40.0% | |
GTGATTCTTGCACCTTTGAA+GGG | + | chr4.2:13238659-13238678 | None:intergenic | 40.0% | |
TCAGCGTTATCAGTAGAACT+TGG | + | chr4.2:13239004-13239023 | None:intergenic | 40.0% | |
! | AGACTACTACTGGTGTTAAG+AGG | - | chr4.2:13239119-13239138 | MS.gene059364:CDS | 40.0% |
! | GTGAGACTCTTCAAGAGTAT+TGG | - | chr4.2:13238837-13238856 | MS.gene059364:CDS | 40.0% |
! | GTTTCTGAAGAGACTACTAC+TGG | - | chr4.2:13239109-13239128 | MS.gene059364:CDS | 40.0% |
! | TTCAAAGGTGCAAGAATCAC+CGG | - | chr4.2:13238659-13238678 | MS.gene059364:CDS | 40.0% |
!! | AGACTCTTCAAGAGTATTGG+TGG | - | chr4.2:13238840-13238859 | MS.gene059364:CDS | 40.0% |
ACAGTAGAGAAAACCCAAGC+TGG | - | chr4.2:13238515-13238534 | MS.gene059364:CDS | 45.0% | |
ATCGAAACCCTAACCGCTTT+AGG | - | chr4.2:13238716-13238735 | MS.gene059364:CDS | 45.0% | |
CCATCGTCAACAATCAAGTC+AGG | + | chr4.2:13238905-13238924 | None:intergenic | 45.0% | |
GACTTGATTGTTGACGATGG+TGG | - | chr4.2:13238905-13238924 | MS.gene059364:CDS | 45.0% | |
GATCCCTAACCTTGTACTCA+CGG | + | chr4.2:13238541-13238560 | None:intergenic | 45.0% | |
GATGGTCATGTGAAGAGATC+CGG | + | chr4.2:13238681-13238700 | None:intergenic | 45.0% | |
GGTGATTCTTGCACCTTTGA+AGG | + | chr4.2:13238660-13238679 | None:intergenic | 45.0% | |
GGTTGAAGACTGATCCTAAG+AGG | - | chr4.2:13239056-13239075 | MS.gene059364:CDS | 45.0% | |
TACTGAACGTGCTCTTGACT+GGG | - | chr4.2:13238865-13238884 | MS.gene059364:CDS | 45.0% | |
TTCAGCACCTAAAGCGGTTA+GGG | + | chr4.2:13238726-13238745 | None:intergenic | 45.0% | |
! | CCTGACTTGATTGTTGACGA+TGG | - | chr4.2:13238902-13238921 | MS.gene059364:CDS | 45.0% |
! | GATCTTTCCCAAGCCGATTT+CGG | - | chr4.2:13238557-13238576 | MS.gene059364:CDS | 45.0% |
! | GCTACTTTGTTGATCCACGA+AGG | - | chr4.2:13238932-13238951 | MS.gene059364:CDS | 45.0% |
! | TCTTGCACCTTTGAAGGGTT+GGG | + | chr4.2:13238654-13238673 | None:intergenic | 45.0% |
! | TTCTTGCACCTTTGAAGGGT+TGG | + | chr4.2:13238655-13238674 | None:intergenic | 45.0% |
!! | GTTGATCCACGAAGGTGTTA+AGG | - | chr4.2:13238940-13238959 | MS.gene059364:CDS | 45.0% |
AAGCGGTTAGGGTTTCGATG+AGG | + | chr4.2:13238715-13238734 | None:intergenic | 50.0% | |
ACGGACTTCAGCACCTAAAG+CGG | + | chr4.2:13238732-13238751 | None:intergenic | 50.0% | |
ACTGAACGTGCTCTTGACTG+GGG | - | chr4.2:13238866-13238885 | MS.gene059364:CDS | 50.0% | |
ATGTCCTGCCGAACTGAGTT+CGG | - | chr4.2:13238623-13238642 | MS.gene059364:CDS | 50.0% | |
CGACTCTGTTACCAAGAGCA+AGG | - | chr4.2:13239195-13239214 | MS.gene059364:CDS | 50.0% | |
CTTCAGCACCTAAAGCGGTT+AGG | + | chr4.2:13238727-13238746 | None:intergenic | 50.0% | |
CTTCAGCCTTAACACCTTCG+TGG | + | chr4.2:13238949-13238968 | None:intergenic | 50.0% | |
GGTTAGGGTTTCGATGAGGA+CGG | + | chr4.2:13238711-13238730 | None:intergenic | 50.0% | |
GTACTGAACGTGCTCTTGAC+TGG | - | chr4.2:13238864-13238883 | MS.gene059364:CDS | 50.0% | |
TGGCCGTGAGTACAAGGTTA+GGG | - | chr4.2:13238535-13238554 | MS.gene059364:CDS | 50.0% | |
TTGAAGAGTCTCACCCTTCC+AGG | + | chr4.2:13238831-13238850 | None:intergenic | 50.0% | |
!! | CTTTAGGTGCTGAAGTCCGT+TGG | - | chr4.2:13238732-13238751 | MS.gene059364:CDS | 50.0% |
AGTTCGGCAGGACATGAGTC+CGG | + | chr4.2:13238618-13238637 | None:intergenic | 55.0% | |
ATCAAGTCAGGACCACCACC+TGG | + | chr4.2:13238893-13238912 | None:intergenic | 55.0% | |
CTGGCCGTGAGTACAAGGTT+AGG | - | chr4.2:13238534-13238553 | MS.gene059364:CDS | 55.0% | |
CTTGTACTCACGGCCAGCTT+GGG | + | chr4.2:13238531-13238550 | None:intergenic | 55.0% | |
GAGTCCGGGCATCTCGATTT+CGG | + | chr4.2:13238603-13238622 | None:intergenic | 55.0% | |
GATCTCGAGTCGGCCGAAAT+CGG | + | chr4.2:13238573-13238592 | None:intergenic | 55.0% | |
GGACCATCCCAACCCTTCAA+AGG | - | chr4.2:13238644-13238663 | MS.gene059364:CDS | 55.0% | |
GGGATGGTCCGAACTCAGTT+CGG | + | chr4.2:13238634-13238653 | None:intergenic | 55.0% | |
TAGGGTTTCGATGAGGACGG+CGG | + | chr4.2:13238708-13238727 | None:intergenic | 55.0% | |
TTGGCCGAAATCGAGATGCC+CGG | - | chr4.2:13238596-13238615 | MS.gene059364:CDS | 55.0% | |
TTTCGATGAGGACGGCGGTT+TGG | + | chr4.2:13238703-13238722 | None:intergenic | 55.0% | |
! | GCACCTTTGAAGGGTTGGGA+TGG | + | chr4.2:13238650-13238669 | None:intergenic | 55.0% |
CCAAGCTGGCCGTGAGTACA+AGG | - | chr4.2:13238529-13238548 | MS.gene059364:CDS | 60.0% | |
CCTTGTACTCACGGCCAGCT+TGG | + | chr4.2:13238532-13238551 | None:intergenic | 60.0% | |
CGGCCAACTCGATCTCGAGT+CGG | + | chr4.2:13238583-13238602 | None:intergenic | 60.0% | |
CTCACCCTTCCAGGCGAAGA+CGG | + | chr4.2:13238822-13238841 | None:intergenic | 60.0% | |
GTTCGGCAGGACATGAGTCC+GGG | + | chr4.2:13238617-13238636 | None:intergenic | 60.0% | |
TGGTCCGAACTCAGTTCGGC+AGG | + | chr4.2:13238630-13238649 | None:intergenic | 60.0% | |
! | GAGTCGGCCGAAATCGGCTT+GGG | + | chr4.2:13238567-13238586 | None:intergenic | 60.0% |
! | GATGAGGACGGCGGTTTGGA+TGG | + | chr4.2:13238699-13238718 | None:intergenic | 60.0% |
ACCCTTCCAGGCGAAGACGG+CGG | + | chr4.2:13238819-13238838 | None:intergenic | 65.0% | |
CGAGTCGGCCGAAATCGGCT+TGG | + | chr4.2:13238568-13238587 | None:intergenic | 65.0% | |
CGTGCTCTTGACTGGGGTCC+AGG | - | chr4.2:13238872-13238891 | MS.gene059364:CDS | 65.0% | |
CTTGACTGGGGTCCAGGTGG+TGG | - | chr4.2:13238878-13238897 | MS.gene059364:CDS | 65.0% | |
GCTCTTGACTGGGGTCCAGG+TGG | - | chr4.2:13238875-13238894 | MS.gene059364:CDS | 65.0% | |
!! | CGGCCGACTCGAGATCGAGT+TGG | - | chr4.2:13238577-13238596 | MS.gene059364:CDS | 65.0% |
GCCGCCGTCTTCGCCTGGAA+GGG | - | chr4.2:13238815-13238834 | MS.gene059364:CDS | 70.0% | |
GGCGCTGTCACGAGCGATGG+CGG | + | chr4.2:13238798-13238817 | None:intergenic | 70.0% | |
! | GCTGTCACGAGCGATGGCGG+CGG | + | chr4.2:13238795-13238814 | None:intergenic | 70.0% |
ACAGCGCCGCCGTCTTCGCC+TGG | - | chr4.2:13238810-13238829 | MS.gene059364:CDS | 75.0% | |
CGCCGCCGTCTTCGCCTGGA+AGG | - | chr4.2:13238814-13238833 | MS.gene059364:CDS | 75.0% | |
GGCGGCGCTGTCACGAGCGA+TGG | + | chr4.2:13238801-13238820 | None:intergenic | 75.0% | |
! | GTCACGAGCGATGGCGGCGG+CGG | + | chr4.2:13238792-13238811 | None:intergenic | 75.0% |
!! | GAGCGATGGCGGCGGCGGCG+TGG | + | chr4.2:13238787-13238806 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 13238506 | 13239243 | 13238506 | ID=MS.gene059364 |
chr4.2 | mRNA | 13238506 | 13239243 | 13238506 | ID=MS.gene059364.t1;Parent=MS.gene059364 |
chr4.2 | exon | 13238506 | 13239243 | 13238506 | ID=MS.gene059364.t1.exon1;Parent=MS.gene059364.t1 |
chr4.2 | CDS | 13238506 | 13239243 | 13238506 | ID=cds.MS.gene059364.t1;Parent=MS.gene059364.t1 |
Gene Sequence |
Protein sequence |