Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09373.t1 | XP_013455885.1 | 94.7 | 645 | 27 | 2 | 1 | 645 | 1 | 638 | 0.00E+00 | 1243.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09373.t1 | Q9FYC7 | 61.6 | 635 | 232 | 8 | 14 | 645 | 40 | 665 | 4.1e-225 | 782.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09373.t1 | A0A072UKK7 | 94.7 | 645 | 27 | 2 | 1 | 645 | 1 | 638 | 0.0e+00 | 1243.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055251 | MS.gene09373 | 0.804761 | 1.85E-49 | -1.69E-46 |
| MS.gene056266 | MS.gene09373 | -0.819928 | 8.98E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09373.t1 | MTR_4g056140 | 94.729 | 645 | 27 | 2 | 1 | 645 | 1 | 638 | 0.0 | 1237 |
| MS.gene09373.t1 | MTR_8g019570 | 53.281 | 640 | 271 | 9 | 14 | 645 | 58 | 677 | 0.0 | 684 |
| MS.gene09373.t1 | MTR_6g045280 | 38.462 | 78 | 33 | 1 | 202 | 279 | 63 | 125 | 6.94e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09373.t1 | AT3G44830 | 61.890 | 635 | 230 | 7 | 14 | 645 | 40 | 665 | 0.0 | 777 |
| MS.gene09373.t1 | AT5G13640 | 53.917 | 651 | 272 | 10 | 4 | 645 | 40 | 671 | 0.0 | 676 |
| MS.gene09373.t1 | AT5G13640 | 53.889 | 540 | 229 | 8 | 108 | 645 | 6 | 527 | 0.0 | 548 |
| MS.gene09373.t1 | AT5G13640 | 53.471 | 533 | 228 | 8 | 115 | 645 | 1 | 515 | 0.0 | 531 |
Find 150 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCTCCATTTCCTAAAA+TGG | 0.106647 | 4.1:-42004398 | MS.gene09373:CDS |
| CATCCTGTTGTTCTTGTTCC+TGG | 0.118959 | 4.1:-42006455 | MS.gene09373:CDS |
| GTCAGCCTTAATAGAAAATT+TGG | 0.145337 | 4.1:-42004929 | MS.gene09373:CDS |
| AGCGCGTGCCAACAACATTT+TGG | 0.150771 | 4.1:-42001939 | MS.gene09373:CDS |
| CGCTAGATGAGTTATTAATT+TGG | 0.192454 | 4.1:+42002176 | None:intergenic |
| AATATATTGCTAACTGCTTT+TGG | 0.195787 | 4.1:+42004276 | None:intergenic |
| TTGCTTCTGGTTATCATATT+TGG | 0.201664 | 4.1:-42004951 | MS.gene09373:CDS |
| TTTATTCCTCCATACTTTAT+AGG | 0.218413 | 4.1:+42003054 | None:intergenic |
| TATTTGTAATGTGCATATTT+AGG | 0.225116 | 4.1:+42002490 | None:intergenic |
| ACTACCCGATGCTCCGAATA+TGG | 0.256691 | 4.1:-42002290 | MS.gene09373:CDS |
| ATCCGAACATGATAAGTTAA+AGG | 0.285055 | 4.1:+42002681 | None:intergenic |
| TGGGATTGTGACTGCTGGTT+TGG | 0.285942 | 4.1:-42006435 | MS.gene09373:CDS |
| ATCAACACACCTCGGTGTTT+TGG | 0.287518 | 4.1:+42004845 | None:intergenic |
| GGTAGTTGTACCTCAATCTA+TGG | 0.305168 | 4.1:-42004430 | MS.gene09373:CDS |
| CAGATGGTTTCACCGCCTTT+TGG | 0.312872 | 4.1:+42003207 | None:intergenic |
| AGACAGTATATTTCCATATT+CGG | 0.315498 | 4.1:+42002277 | None:intergenic |
| TATGGAGGAATAAACTCTTT+TGG | 0.332720 | 4.1:-42003045 | MS.gene09373:CDS |
| CAAAAGGCGGTGAAACCATC+TGG | 0.335571 | 4.1:-42003206 | MS.gene09373:CDS |
| ATAGAAAATTTGGCAAGAAT+TGG | 0.340569 | 4.1:-42004919 | MS.gene09373:CDS |
| GACTGCTGGTTTGGAACTTT+GGG | 0.344887 | 4.1:-42006426 | MS.gene09373:CDS |
| GATTACTGTTGTTGGTTGAT+TGG | 0.347454 | 4.1:-42006602 | MS.gene09373:CDS |
| CGTTTGAATGTTGTAAGTTC+AGG | 0.349898 | 4.1:-42002100 | MS.gene09373:CDS |
| AGAACACGGTTCAATCCTTC+TGG | 0.351072 | 4.1:-42002049 | MS.gene09373:CDS |
| ATGGAAATATACTGTCTATA+TGG | 0.353035 | 4.1:-42002271 | MS.gene09373:CDS |
| TGACTGCTGGTTTGGAACTT+TGG | 0.354188 | 4.1:-42006427 | MS.gene09373:CDS |
| GTTAAAGAACCTATAAAGTA+TGG | 0.355231 | 4.1:-42003063 | MS.gene09373:CDS |
| TCACATTTACTCCATTCATT+AGG | 0.363288 | 4.1:+42003165 | None:intergenic |
| TGTTCTTCTGCGCCATCCTT+TGG | 0.363455 | 4.1:+42002066 | None:intergenic |
| ATCCTGTTGTTCTTGTTCCT+GGG | 0.366281 | 4.1:-42006454 | MS.gene09373:CDS |
| CATCTGGGGCGACTTGGATT+CGG | 0.366339 | 4.1:-42003190 | MS.gene09373:CDS |
| TTCCTTTAACTTATCATGTT+CGG | 0.368415 | 4.1:-42002683 | MS.gene09373:CDS |
| CTCAGATATCCTCATGATAT+CGG | 0.383781 | 4.1:+42001835 | None:intergenic |
| TCGGCACGCTTCATCACATT+TGG | 0.384034 | 4.1:+42002553 | None:intergenic |
| ACTGCCCTGACTCGAATTCC+TGG | 0.391992 | 4.1:+42005000 | None:intergenic |
| ACTTATCATGTTCGGATGTT+CGG | 0.393703 | 4.1:-42002675 | MS.gene09373:CDS |
| TTGGTTATGTGTGTACAATT+TGG | 0.396957 | 4.1:-42006583 | MS.gene09373:CDS |
| AATATGCACATTACAAATAC+TGG | 0.402272 | 4.1:-42002486 | MS.gene09373:CDS |
| TAACTCATCTAGCGTAGAAA+AGG | 0.404701 | 4.1:-42002167 | MS.gene09373:CDS |
| TTTCCTCCATTTCCTAAAAT+GGG | 0.407748 | 4.1:-42004397 | MS.gene09373:CDS |
| ACCCACCAGGAATTCGAGTC+AGG | 0.412402 | 4.1:-42005005 | MS.gene09373:CDS |
| GTTCCTGGGATTGTGACTGC+TGG | 0.421055 | 4.1:-42006440 | MS.gene09373:CDS |
| GAAAGACAGCCTCCAGTCAT+AGG | 0.421225 | 4.1:+42004867 | None:intergenic |
| AACACTTCCCAAAATGTTGT+TGG | 0.421853 | 4.1:+42001931 | None:intergenic |
| AATATCAGCCCGGCATTTCT+CGG | 0.423297 | 4.1:-42004303 | MS.gene09373:CDS |
| GGAGCCACCGGTGTAACTAT+TGG | 0.425537 | 4.1:-42001875 | MS.gene09373:CDS |
| CCTCCCATGGGTGGTGGTGG+TGG | 0.427685 | 4.1:-42004363 | MS.gene09373:CDS |
| ATCTGGGGCGACTTGGATTC+GGG | 0.438140 | 4.1:-42003189 | MS.gene09373:CDS |
| GACTGTTTAGGAAGAGATTG+TGG | 0.446238 | 4.1:-42006382 | MS.gene09373:CDS |
| AATGATGTTTCTTTAGTTGA+CGG | 0.451788 | 4.1:-42002130 | MS.gene09373:CDS |
| ATCCCAGGAACAAGAACAAC+AGG | 0.452659 | 4.1:+42006452 | None:intergenic |
| GTAAATGTGATCAGGTAAAG+AGG | 0.455853 | 4.1:-42003152 | MS.gene09373:CDS |
| GCAGTGATGCTGCATTTGTC+AGG | 0.458112 | 4.1:-42004242 | MS.gene09373:intron |
| ACTGCATTGATTACTGTTGT+TGG | 0.458590 | 4.1:-42006610 | MS.gene09373:CDS |
| ATTTCCATATTCGGAGCATC+GGG | 0.462366 | 4.1:+42002286 | None:intergenic |
| GAGCTTATGTATATAACAAA+TGG | 0.466054 | 4.1:-42004465 | MS.gene09373:CDS |
| CATACTTACTTTGTTTCAAG+TGG | 0.470722 | 4.1:+42002457 | None:intergenic |
| CCGCCTCCCATGGGTGGTGG+TGG | 0.475149 | 4.1:-42004366 | MS.gene09373:CDS |
| TTTGGAACACCGAGAAATGC+CGG | 0.476050 | 4.1:+42004294 | None:intergenic |
| CCCAAATGTTCCTAAAAGAA+AGG | 0.478695 | 4.1:-42002620 | MS.gene09373:CDS |
| AGATGCTCTAACCAGCATAA+AGG | 0.479607 | 4.1:+42005054 | None:intergenic |
| GTTTGAATGTTGTAAGTTCA+GGG | 0.480165 | 4.1:-42002099 | MS.gene09373:CDS |
| GCCGAGGCTCATTTCTCTGA+CGG | 0.483809 | 4.1:-42002535 | MS.gene09373:CDS |
| GTAGTTGTACCTCAATCTAT+GGG | 0.483976 | 4.1:-42004429 | MS.gene09373:CDS |
| CGAGTTGCTTCTGGAGCCAC+CGG | 0.486148 | 4.1:-42001887 | MS.gene09373:CDS |
| TCTGCATAATGAGACTGGTC+TGG | 0.492498 | 4.1:-42005028 | MS.gene09373:CDS |
| GTGGTGGTGGTGGTCCAGGT+TGG | 0.492891 | 4.1:-42004353 | MS.gene09373:CDS |
| GTTATGTGTGTACAATTTGG+TGG | 0.493494 | 4.1:-42006580 | MS.gene09373:CDS |
| GGTTGAGACACCGCCTCCCA+TGG | 0.494478 | 4.1:-42004376 | MS.gene09373:CDS |
| TCGTCGGCAGCAACAAGCTC+GGG | 0.495087 | 4.1:+42004976 | None:intergenic |
| TATTTCCATATTCGGAGCAT+CGG | 0.495161 | 4.1:+42002285 | None:intergenic |
| TCAAAACCAGTTAATGTAGC+TGG | 0.495233 | 4.1:+42006530 | None:intergenic |
| AACTCATCTAGCGTAGAAAA+GGG | 0.496676 | 4.1:-42002166 | MS.gene09373:CDS |
| CTCTCTCTGCATAATGAGAC+TGG | 0.497112 | 4.1:-42005033 | MS.gene09373:CDS |
| TGAAACCATCTGGGGCGACT+TGG | 0.498231 | 4.1:-42003196 | MS.gene09373:CDS |
| TGATTACCTTGGTCTTCAAA+CGG | 0.498650 | 4.1:-42003283 | MS.gene09373:CDS |
| GAAGGGAGACCTTGTGCTGA+TGG | 0.498883 | 4.1:-42006404 | MS.gene09373:CDS |
| TGAATGGAGTAAATGTGATC+AGG | 0.500127 | 4.1:-42003160 | MS.gene09373:CDS |
| CTGGTTTGGAACTTTGGGAA+GGG | 0.504699 | 4.1:-42006421 | MS.gene09373:CDS |
| TGGATTCGGGTCCTAATGAA+TGG | 0.505642 | 4.1:-42003176 | MS.gene09373:CDS |
| TGGTTGATTCACCTGGTTTG+AGG | 0.506730 | 4.1:-42006505 | MS.gene09373:CDS |
| ATCATCTCATTGATGCCAAA+AGG | 0.509480 | 4.1:-42003222 | MS.gene09373:CDS |
| GATGAGTTATTAATTTGGAA+AGG | 0.515416 | 4.1:+42002181 | None:intergenic |
| CTTGTGCTGATGGACTGTTT+AGG | 0.518343 | 4.1:-42006394 | MS.gene09373:CDS |
| TCTTGCGAGTATGTAGAACT+TGG | 0.518457 | 4.1:-42003251 | MS.gene09373:CDS |
| ATCGTCGGCAGCAACAAGCT+CGG | 0.520423 | 4.1:+42004975 | None:intergenic |
| TGCACATGGCTTCCTATGAC+TGG | 0.520435 | 4.1:-42004879 | MS.gene09373:CDS |
| GTACGAGGTAGTGTTCTTGA+AGG | 0.522599 | 4.1:-42001980 | MS.gene09373:CDS |
| GGTTCATGTGCGCCAAAGGA+TGG | 0.523331 | 4.1:-42002078 | MS.gene09373:CDS |
| TTGGAACACCGAGAAATGCC+GGG | 0.523951 | 4.1:+42004295 | None:intergenic |
| CCTAAAAGAAAGGCTAGTAC+AGG | 0.525616 | 4.1:-42002610 | MS.gene09373:CDS |
| AAAGAAGCAAAGTAAAGTGA+AGG | 0.527470 | 4.1:-42006642 | MS.gene09373:CDS |
| AGCAAAGTAAAGTGAAGGAG+TGG | 0.528176 | 4.1:-42006637 | MS.gene09373:CDS |
| TGGCAATTAGGCCTTTATGC+TGG | 0.530788 | 4.1:-42005065 | MS.gene09373:intron |
| CCCTGACTCGAATTCCTGGT+GGG | 0.533011 | 4.1:+42005004 | None:intergenic |
| AAAAGGCGGTGAAACCATCT+GGG | 0.535354 | 4.1:-42003205 | MS.gene09373:CDS |
| TCAGGGTTCATGTGCGCCAA+AGG | 0.543574 | 4.1:-42002082 | MS.gene09373:CDS |
| ATTTAAAATGCCAGAAGTCA+CGG | 0.545132 | 4.1:+42003308 | None:intergenic |
| AACAAATGGCTATAAGAAAG+TGG | 0.545400 | 4.1:-42004451 | MS.gene09373:CDS |
| TAAATGTGATCAGGTAAAGA+GGG | 0.546659 | 4.1:-42003151 | MS.gene09373:CDS |
| CCGAGGCTCATTTCTCTGAC+GGG | 0.550249 | 4.1:-42002534 | MS.gene09373:CDS |
| TGGCAAGAATTGGTTACGAA+GGG | 0.553618 | 4.1:-42004909 | MS.gene09373:CDS |
| TTTGAAGTGGTTGATTCACC+TGG | 0.558776 | 4.1:-42006512 | MS.gene09373:CDS |
| GCTGGTTTGGAACTTTGGGA+AGG | 0.558892 | 4.1:-42006422 | MS.gene09373:CDS |
| TTGGCAAGAATTGGTTACGA+AGG | 0.564599 | 4.1:-42004910 | MS.gene09373:CDS |
| ACACCGCCTCCCATGGGTGG+TGG | 0.565944 | 4.1:-42004369 | MS.gene09373:CDS |
| GTTGAGACACCGCCTCCCAT+GGG | 0.567506 | 4.1:-42004375 | MS.gene09373:CDS |
| AGCAATCATGAATATCAGCC+CGG | 0.569294 | 4.1:-42004313 | MS.gene09373:CDS |
| CTTGCGAGTATGTAGAACTT+GGG | 0.569603 | 4.1:-42003250 | MS.gene09373:CDS |
| CCACCACCACCCATGGGAGG+CGG | 0.570935 | 4.1:+42004366 | None:intergenic |
| CGAATCCAAGTCGCCCCAGA+TGG | 0.574839 | 4.1:+42003191 | None:intergenic |
| AAACCAGCAGTCACAATCCC+AGG | 0.575877 | 4.1:+42006437 | None:intergenic |
| ACGGTTCAATCCTTCTGGAA+TGG | 0.578120 | 4.1:-42002044 | MS.gene09373:CDS |
| ACTTTATAGGTTCTTTAACG+TGG | 0.580240 | 4.1:+42003067 | None:intergenic |
| CGAAGCAAGTAACTGCGAAA+CGG | 0.582127 | 4.1:+42003017 | None:intergenic |
| GAGACACCGCCTCCCATGGG+TGG | 0.586020 | 4.1:-42004372 | MS.gene09373:CDS |
| CCCGTCAGAGAAATGAGCCT+CGG | 0.589581 | 4.1:+42002534 | None:intergenic |
| GCCCTGACTCGAATTCCTGG+TGG | 0.593334 | 4.1:+42005003 | None:intergenic |
| GCCACCGGTGTAACTATTGG+AGG | 0.593714 | 4.1:-42001872 | MS.gene09373:CDS |
| ACTGTTTAGGAAGAGATTGT+GGG | 0.602326 | 4.1:-42006381 | MS.gene09373:CDS |
| ATATGCTTGTACTTGTCAGA+AGG | 0.605428 | 4.1:+42002205 | None:intergenic |
| TACACTTGATTCAGAAGCAG+AGG | 0.610882 | 4.1:-42002986 | MS.gene09373:intron |
| CCACCACCACCACCCATGGG+AGG | 0.614770 | 4.1:+42004363 | None:intergenic |
| TAGTTGTACCTCAATCTATG+GGG | 0.617016 | 4.1:-42004428 | MS.gene09373:CDS |
| TACGAGGTAGTGTTCTTGAA+GGG | 0.622527 | 4.1:-42001979 | MS.gene09373:CDS |
| ACATGGCTTCCTATGACTGG+AGG | 0.623723 | 4.1:-42004876 | MS.gene09373:CDS |
| CTAAACAGTCCATCAGCACA+AGG | 0.624539 | 4.1:+42006395 | None:intergenic |
| ATCGCCTCCAATAGTTACAC+CGG | 0.625759 | 4.1:+42001868 | None:intergenic |
| TGTACATGTGATCTTGTAGT+CGG | 0.627558 | 4.1:+42002238 | None:intergenic |
| CGAAGGGAAGAACTTGCACA+TGG | 0.629333 | 4.1:-42004893 | MS.gene09373:CDS |
| GAATGTAATGAGATATGTAG+AGG | 0.629569 | 4.1:-42002649 | MS.gene09373:CDS |
| GAGACTGGTCTGGACCCACC+AGG | 0.631009 | 4.1:-42005018 | MS.gene09373:CDS |
| AAAGAACCTATAAAGTATGG+AGG | 0.632909 | 4.1:-42003060 | MS.gene09373:CDS |
| CCCACCAGGAATTCGAGTCA+GGG | 0.636571 | 4.1:-42005004 | MS.gene09373:CDS |
| ATCTCATTGATGCCAAAAGG+CGG | 0.643250 | 4.1:-42003219 | MS.gene09373:CDS |
| GAAGGGAGAAGTCTAGAGAG+CGG | 0.649585 | 4.1:-42001962 | MS.gene09373:CDS |
| ATATACGTAGCCATTCCAGA+AGG | 0.653465 | 4.1:+42002034 | None:intergenic |
| GTGTAACTATTGGAGGCGAT+AGG | 0.665057 | 4.1:-42001865 | MS.gene09373:CDS |
| GTTCAACCGTTTGAAGACCA+AGG | 0.665578 | 4.1:+42003277 | None:intergenic |
| GCCTCCAATAGTTACACCGG+TGG | 0.669222 | 4.1:+42001871 | None:intergenic |
| AAGGATGGCGCAGAAGAACA+CGG | 0.670355 | 4.1:-42002063 | MS.gene09373:CDS |
| ATAACCAGAAGCAAAATCGT+CGG | 0.671502 | 4.1:+42004960 | None:intergenic |
| AAATGTGATCAGGTAAAGAG+GGG | 0.673154 | 4.1:-42003150 | MS.gene09373:CDS |
| CTGTTTAGGAAGAGATTGTG+GGG | 0.674054 | 4.1:-42006380 | MS.gene09373:CDS |
| AAATGTGATGAAGCGTGCCG+AGG | 0.675862 | 4.1:-42002551 | MS.gene09373:CDS |
| AGTTGTACCTCAATCTATGG+GGG | 0.677192 | 4.1:-42004427 | MS.gene09373:CDS |
| AGTAACAACACTTATAACTG+CGG | 0.702274 | 4.1:-42003108 | MS.gene09373:CDS |
| AAACAACGAGGTAGTGTACG+AGG | 0.712095 | 4.1:-42001995 | MS.gene09373:CDS |
| ATATCATGAGGATATCTGAG+AGG | 0.718835 | 4.1:-42001832 | MS.gene09373:CDS |
| AAAGGCGGTGAAACCATCTG+GGG | 0.727551 | 4.1:-42003204 | MS.gene09373:CDS |
| GCTGTCTTTCCAAAACACCG+AGG | 0.805594 | 4.1:-42004854 | MS.gene09373:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAGTTTCAATTAATT+TGG | - | chr4.1:42003918-42003937 | MS.gene09373:intron | 10.0% |
| !! | TATAATTATAAGTTTAATGT+AGG | - | chr4.1:42002668-42002687 | MS.gene09373:CDS | 10.0% |
| !!! | TGATTTTATCAAATTATTAT+CGG | - | chr4.1:42004826-42004845 | MS.gene09373:intron | 10.0% |
| !! | AAAAAAGAAAAACTCATTAT+TGG | + | chr4.1:42003365-42003384 | None:intergenic | 15.0% |
| !! | TCAAATTAATGAATCAAATA+GGG | + | chr4.1:42006128-42006147 | None:intergenic | 15.0% |
| !! | TTCAAATTAATGAATCAAAT+AGG | + | chr4.1:42006129-42006148 | None:intergenic | 15.0% |
| !!! | ATTTTAAATTTTGATTACCT+TGG | - | chr4.1:42005170-42005189 | MS.gene09373:intron | 15.0% |
| !!! | TTTCCTTTTATTTTTCTTAT+CGG | - | chr4.1:42003824-42003843 | MS.gene09373:intron | 15.0% |
| !! | AAGAAGTCAAATTGAAATAA+AGG | + | chr4.1:42004267-42004286 | None:intergenic | 20.0% |
| !! | AGATAATATGAAAGTAAAAC+TGG | - | chr4.1:42004942-42004961 | MS.gene09373:CDS | 20.0% |
| !! | ATAAGAAGAAAAACTGAATA+AGG | - | chr4.1:42004701-42004720 | MS.gene09373:intron | 20.0% |
| !! | ATAATTAACGTAGTATATGA+TGG | - | chr4.1:42005110-42005129 | MS.gene09373:intron | 20.0% |
| !! | GAAAAACAAATAGTATCATA+TGG | + | chr4.1:42005506-42005525 | None:intergenic | 20.0% |
| !! | TAACCGATAAGAAAAATAAA+AGG | + | chr4.1:42003830-42003849 | None:intergenic | 20.0% |
| !! | TAAGAAAAATAAAAGGAAAG+CGG | + | chr4.1:42003823-42003842 | None:intergenic | 20.0% |
| !! | TATTTGTAATGTGCATATTT+AGG | + | chr4.1:42005977-42005996 | None:intergenic | 20.0% |
| !! | TGTTACACTATGAAAATATA+GGG | - | chr4.1:42005080-42005099 | MS.gene09373:intron | 20.0% |
| !!! | ATCAATTTTTGCATCTTAAT+TGG | - | chr4.1:42003230-42003249 | MS.gene09373:CDS | 20.0% |
| !!! | GAAATCTAGAATGATATAAT+GGG | + | chr4.1:42003022-42003041 | None:intergenic | 20.0% |
| !!! | TGAAATCTAGAATGATATAA+TGG | + | chr4.1:42003023-42003042 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTCTTTTTTTGTG+TGG | - | chr4.1:42003376-42003395 | MS.gene09373:intron | 20.0% |
| ! | AAGAAAAATAAAAGGAAAGC+GGG | + | chr4.1:42003822-42003841 | None:intergenic | 25.0% |
| ! | AATATGCACATTACAAATAC+TGG | - | chr4.1:42005978-42005997 | MS.gene09373:intron | 25.0% |
| ! | AATGATGTTTCTTTAGTTGA+CGG | - | chr4.1:42006334-42006353 | MS.gene09373:intron | 25.0% |
| ! | AGACAGTATATTTCCATATT+CGG | + | chr4.1:42006190-42006209 | None:intergenic | 25.0% |
| ! | AGTACTAACTGTTAACAAAA+GGG | + | chr4.1:42002886-42002905 | None:intergenic | 25.0% |
| ! | AGTTTATAGCATAGTTCATA+TGG | - | chr4.1:42002222-42002241 | MS.gene09373:CDS | 25.0% |
| ! | ATACGTTTCTATGAATCAAA+AGG | - | chr4.1:42005037-42005056 | MS.gene09373:CDS | 25.0% |
| ! | ATAGAAAATTTGGCAAGAAT+TGG | - | chr4.1:42003545-42003564 | MS.gene09373:intron | 25.0% |
| ! | ATGCCATCATTAATAATCTA+AGG | - | chr4.1:42004613-42004632 | MS.gene09373:intron | 25.0% |
| ! | ATGGAAATATACTGTCTATA+TGG | - | chr4.1:42006193-42006212 | MS.gene09373:intron | 25.0% |
| ! | CATAGAAACGTATAAATAGA+TGG | + | chr4.1:42005030-42005049 | None:intergenic | 25.0% |
| ! | CATGCTTATTATGTTAAACT+TGG | - | chr4.1:42003051-42003070 | MS.gene09373:CDS | 25.0% |
| ! | CTGTTACACTATGAAAATAT+AGG | - | chr4.1:42005079-42005098 | MS.gene09373:intron | 25.0% |
| ! | GAGCTTATGTATATAACAAA+TGG | - | chr4.1:42003999-42004018 | MS.gene09373:intron | 25.0% |
| ! | GTGGTTAATTATATCTTATG+TGG | - | chr4.1:42002814-42002833 | MS.gene09373:intron | 25.0% |
| ! | GTTAAAGAACCTATAAAGTA+TGG | - | chr4.1:42005401-42005420 | MS.gene09373:intron | 25.0% |
| ! | TATCAAATTATTATCGGTGT+CGG | - | chr4.1:42004832-42004851 | MS.gene09373:intron | 25.0% |
| ! | TGCCATCATTAATAATCTAA+GGG | - | chr4.1:42004614-42004633 | MS.gene09373:intron | 25.0% |
| ! | TTGAACTATACTGATCAAAT+CGG | + | chr4.1:42005665-42005684 | None:intergenic | 25.0% |
| ! | TTGTAGAATTTGAGAAAAAG+TGG | + | chr4.1:42002112-42002131 | None:intergenic | 25.0% |
| ! | TTTATTCCTCCATACTTTAT+AGG | + | chr4.1:42005413-42005432 | None:intergenic | 25.0% |
| !! | AATAACAGAAGCTTTATCTT+TGG | + | chr4.1:42003311-42003330 | None:intergenic | 25.0% |
| !! | AATAATCTGAAATCTACCTA+TGG | - | chr4.1:42004496-42004515 | MS.gene09373:CDS | 25.0% |
| !! | AATATATTGCTAACTGCTTT+TGG | + | chr4.1:42004191-42004210 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr4.1:42004353-42004372 | None:intergenic | 25.0% |
| !! | CGAAATTTGAAGGTATAATT+TGG | - | chr4.1:42004291-42004310 | MS.gene09373:CDS | 25.0% |
| !! | CTTTTTCTCAAATTCTACAA+AGG | - | chr4.1:42002112-42002131 | MS.gene09373:CDS | 25.0% |
| !! | GATGAGTTATTAATTTGGAA+AGG | + | chr4.1:42006286-42006305 | None:intergenic | 25.0% |
| !! | TCTTGCCAAATTTTCTATTA+AGG | + | chr4.1:42003543-42003562 | None:intergenic | 25.0% |
| !! | TTCAGTTTTTCTTCTTATCA+TGG | + | chr4.1:42004699-42004718 | None:intergenic | 25.0% |
| !! | TTCCTTTAACTTATCATGTT+CGG | - | chr4.1:42005781-42005800 | MS.gene09373:intron | 25.0% |
| !!! | ATGTTCTTGAAATTTTGACA+TGG | - | chr4.1:42002422-42002441 | MS.gene09373:intron | 25.0% |
| !!! | TGTAATTGTTTGATTTGTCT+AGG | - | chr4.1:42002494-42002513 | MS.gene09373:CDS | 25.0% |
| !!! | TTTCTGCTTCATAACTTTTT+TGG | + | chr4.1:42003877-42003896 | None:intergenic | 25.0% |
| !!! | TTTTGGCTATATAAGCATAA+AGG | + | chr4.1:42003860-42003879 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTTTTTTGTGTGG+TGG | - | chr4.1:42003379-42003398 | MS.gene09373:intron | 25.0% |
| AAAGAACCTATAAAGTATGG+AGG | - | chr4.1:42005404-42005423 | MS.gene09373:intron | 30.0% | |
| AAAGAAGCAAAGTAAAGTGA+AGG | - | chr4.1:42001822-42001841 | MS.gene09373:CDS | 30.0% | |
| AACAAATGGCTATAAGAAAG+TGG | - | chr4.1:42004013-42004032 | MS.gene09373:intron | 30.0% | |
| AACAGAAACTGAGAATGTTT+AGG | - | chr4.1:42002708-42002727 | MS.gene09373:CDS | 30.0% | |
| AATAGTTTGATCCATCTAGA+CGG | - | chr4.1:42003118-42003137 | MS.gene09373:CDS | 30.0% | |
| ACTTTATAGGTTCTTTAACG+TGG | + | chr4.1:42005400-42005419 | None:intergenic | 30.0% | |
| AGAATGTTTAGGTAGGTATT+AGG | - | chr4.1:42002719-42002738 | MS.gene09373:intron | 30.0% | |
| AGATGAAAGGAAATTTAAGG+AGG | - | chr4.1:42002936-42002955 | MS.gene09373:intron | 30.0% | |
| AGATGGATCAAACTATTACA+TGG | + | chr4.1:42003115-42003134 | None:intergenic | 30.0% | |
| AGGTATCATCAATGTTAAGT+TGG | - | chr4.1:42004669-42004688 | MS.gene09373:intron | 30.0% | |
| AGTAACAACACTTATAACTG+CGG | - | chr4.1:42005356-42005375 | MS.gene09373:intron | 30.0% | |
| ATCCGAACATGATAAGTTAA+AGG | + | chr4.1:42005786-42005805 | None:intergenic | 30.0% | |
| ATTATTAATGATGGCATCCA+AGG | + | chr4.1:42004610-42004629 | None:intergenic | 30.0% | |
| ATTTCCTCCATTTCCTAAAA+TGG | - | chr4.1:42004066-42004085 | MS.gene09373:intron | 30.0% | |
| CAGTACTAACTGTTAACAAA+AGG | + | chr4.1:42002887-42002906 | None:intergenic | 30.0% | |
| CATAACACAATTTAGACCTA+TGG | + | chr4.1:42002190-42002209 | None:intergenic | 30.0% | |
| CGCTAGATGAGTTATTAATT+TGG | + | chr4.1:42006291-42006310 | None:intergenic | 30.0% | |
| GAACTTCAGGAAAATATTGA+AGG | - | chr4.1:42004649-42004668 | MS.gene09373:intron | 30.0% | |
| GAATGTAATGAGATATGTAG+AGG | - | chr4.1:42005815-42005834 | MS.gene09373:intron | 30.0% | |
| GCCATCATTAATAATCTAAG+GGG | - | chr4.1:42004615-42004634 | MS.gene09373:intron | 30.0% | |
| GCTAGTAAGTAAAATACTCA+TGG | + | chr4.1:42002645-42002664 | None:intergenic | 30.0% | |
| GGTAGATGAAAGGAAATTTA+AGG | - | chr4.1:42002933-42002952 | MS.gene09373:intron | 30.0% | |
| GTATTAGGTAATGTTAACCA+AGG | - | chr4.1:42002734-42002753 | MS.gene09373:intron | 30.0% | |
| GTCAGCCTTAATAGAAAATT+TGG | - | chr4.1:42003535-42003554 | MS.gene09373:intron | 30.0% | |
| GTTTGAATGTTGTAAGTTCA+GGG | - | chr4.1:42006365-42006384 | MS.gene09373:CDS | 30.0% | |
| GTTTGAGGATGAAAAATGAA+GGG | - | chr4.1:42001974-42001993 | MS.gene09373:CDS | 30.0% | |
| TAAATGTGATCAGGTAAAGA+GGG | - | chr4.1:42005313-42005332 | MS.gene09373:intron | 30.0% | |
| TCAACCAAACCAATCTAAAT+AGG | - | chr4.1:42004584-42004603 | MS.gene09373:intron | 30.0% | |
| TCACATTTACTCCATTCATT+AGG | + | chr4.1:42005302-42005321 | None:intergenic | 30.0% | |
| TCCCCTTAGATTATTAATGA+TGG | + | chr4.1:42004619-42004638 | None:intergenic | 30.0% | |
| TTATAGCATAAGTGCTTATG+TGG | - | chr4.1:42004380-42004399 | MS.gene09373:CDS | 30.0% | |
| TTGGTTATGTGTGTACAATT+TGG | - | chr4.1:42001881-42001900 | MS.gene09373:CDS | 30.0% | |
| TTGTAGAAGAGAAAAACTTG+TGG | - | chr4.1:42003176-42003195 | MS.gene09373:CDS | 30.0% | |
| TTTCCTCCATTTCCTAAAAT+GGG | - | chr4.1:42004067-42004086 | MS.gene09373:intron | 30.0% | |
| TTTGAGGATGAAAAATGAAG+GGG | - | chr4.1:42001975-42001994 | MS.gene09373:CDS | 30.0% | |
| ! | AAATAAAGGATTGTGTTGCT+AGG | + | chr4.1:42004253-42004272 | None:intergenic | 30.0% |
| ! | AGCAATATATTTTCAGCTGA+AGG | - | chr4.1:42004200-42004219 | MS.gene09373:intron | 30.0% |
| ! | ATTTAAAATGCCAGAAGTCA+CGG | + | chr4.1:42005159-42005178 | None:intergenic | 30.0% |
| ! | CATACTTACTTTGTTTCAAG+TGG | + | chr4.1:42006010-42006029 | None:intergenic | 30.0% |
| ! | CTATTGAGGAAATTTGTTTG+AGG | - | chr4.1:42002445-42002464 | MS.gene09373:intron | 30.0% |
| ! | GATTTTAGATGTCTCTACAA+CGG | - | chr4.1:42002284-42002303 | MS.gene09373:CDS | 30.0% |
| ! | GCTCTTTTCATCAGTTATTA+TGG | - | chr4.1:42004461-42004480 | MS.gene09373:CDS | 30.0% |
| ! | GGATTTTAAATGTGAACTTC+AGG | - | chr4.1:42004636-42004655 | MS.gene09373:intron | 30.0% |
| ! | TATGGAGGAATAAACTCTTT+TGG | - | chr4.1:42005419-42005438 | MS.gene09373:intron | 30.0% |
| ! | TTGCTTCTGGTTATCATATT+TGG | - | chr4.1:42003513-42003532 | MS.gene09373:intron | 30.0% |
| ! | TTTTCAATCTACTAAGAGCT+TGG | + | chr4.1:42003971-42003990 | None:intergenic | 30.0% |
| ! | TTTTCATAGTGTAACAGTCT+AGG | + | chr4.1:42005076-42005095 | None:intergenic | 30.0% |
| !! | AAATTTTGACATGGCTATTG+AGG | - | chr4.1:42002431-42002450 | MS.gene09373:intron | 30.0% |
| !! | CATATGGTAGTTCTAAATTG+AGG | - | chr4.1:42002238-42002257 | MS.gene09373:CDS | 30.0% |
| !! | CCTTTCTTTTAGGAACATTT+GGG | + | chr4.1:42005847-42005866 | None:intergenic | 30.0% |
| !!! | TACATTAACTGGTTTTGAAG+TGG | - | chr4.1:42001939-42001958 | MS.gene09373:CDS | 30.0% |
| AAACCAATCTAAATAGGCCT+TGG | - | chr4.1:42004590-42004609 | MS.gene09373:intron | 35.0% | |
| AAATCCTTGTAAATGAGGTG+AGG | - | chr4.1:42002987-42003006 | MS.gene09373:CDS | 35.0% | |
| AAATGTGATCAGGTAAAGAG+GGG | - | chr4.1:42005314-42005333 | MS.gene09373:intron | 35.0% | |
| AACACTTCCCAAAATGTTGT+TGG | + | chr4.1:42006536-42006555 | None:intergenic | 35.0% | |
| AACTCATCTAGCGTAGAAAA+GGG | - | chr4.1:42006298-42006317 | MS.gene09373:intron | 35.0% | |
| AAGCACTTATGTGACTGTTT+AGG | + | chr4.1:42004548-42004567 | None:intergenic | 35.0% | |
| AAGGATTTGAGAGAAAGAGA+CGG | + | chr4.1:42002975-42002994 | None:intergenic | 35.0% | |
| AAGTAGATTGTGATCCTGTT+TGG | - | chr4.1:42004336-42004355 | MS.gene09373:CDS | 35.0% | |
| AATCACTATAGCAATTGCAG+TGG | - | chr4.1:42002762-42002781 | MS.gene09373:intron | 35.0% | |
| AATCCTTGTAAATGAGGTGA+GGG | - | chr4.1:42002988-42003007 | MS.gene09373:CDS | 35.0% | |
| ACGGACAAAATAACAGTGAA+TGG | + | chr4.1:42005618-42005637 | None:intergenic | 35.0% | |
| ACTGTTTAGGAAGAGATTGT+GGG | - | chr4.1:42002083-42002102 | MS.gene09373:CDS | 35.0% | |
| ACTTATCATGTTCGGATGTT+CGG | - | chr4.1:42005789-42005808 | MS.gene09373:intron | 35.0% | |
| ATAACCAGAAGCAAAATCGT+CGG | + | chr4.1:42003507-42003526 | None:intergenic | 35.0% | |
| ATATCATGAGGATATCTGAG+AGG | - | chr4.1:42006632-42006651 | MS.gene09373:CDS | 35.0% | |
| ATATGCTTGTACTTGTCAGA+AGG | + | chr4.1:42006262-42006281 | None:intergenic | 35.0% | |
| ATCATCTCATTGATGCCAAA+AGG | - | chr4.1:42005242-42005261 | MS.gene09373:intron | 35.0% | |
| CACTATTCTCTACAACATCA+AGG | + | chr4.1:42002797-42002816 | None:intergenic | 35.0% | |
| CCACAAATAAAATTCCCTGT+TGG | + | chr4.1:42003082-42003101 | None:intergenic | 35.0% | |
| CCCAAATGTTCCTAAAAGAA+AGG | - | chr4.1:42005844-42005863 | MS.gene09373:intron | 35.0% | |
| CGTTACTGTACATGTTTACA+AGG | - | chr4.1:42005545-42005564 | MS.gene09373:intron | 35.0% | |
| CGTTTGAATGTTGTAAGTTC+AGG | - | chr4.1:42006364-42006383 | MS.gene09373:CDS | 35.0% | |
| CTCAGATATCCTCATGATAT+CGG | + | chr4.1:42006632-42006651 | None:intergenic | 35.0% | |
| CTCTCAAATCCTTGTAAATG+AGG | - | chr4.1:42002982-42003001 | MS.gene09373:intron | 35.0% | |
| CTTCTTCATGCGAAATTTGA+AGG | - | chr4.1:42004281-42004300 | MS.gene09373:CDS | 35.0% | |
| CTTGATGTTGTAGAGAATAG+TGG | - | chr4.1:42002795-42002814 | MS.gene09373:intron | 35.0% | |
| GAAACTGAGAATGTTTAGGT+AGG | - | chr4.1:42002712-42002731 | MS.gene09373:CDS | 35.0% | |
| GAGTATCAACAAAAACAACG+AGG | - | chr4.1:42006457-42006476 | MS.gene09373:CDS | 35.0% | |
| GCTATAGTGATTGAAAACCT+TGG | + | chr4.1:42002754-42002773 | None:intergenic | 35.0% | |
| GGTTTGAGGATGAAAAATGA+AGG | - | chr4.1:42001973-42001992 | MS.gene09373:CDS | 35.0% | |
| GTAAAATACTCATGGTGACA+TGG | + | chr4.1:42002637-42002656 | None:intergenic | 35.0% | |
| GTAAATGTGATCAGGTAAAG+AGG | - | chr4.1:42005312-42005331 | MS.gene09373:intron | 35.0% | |
| GTAGTTGTACCTCAATCTAT+GGG | - | chr4.1:42004035-42004054 | MS.gene09373:intron | 35.0% | |
| GTTATGTGTGTACAATTTGG+TGG | - | chr4.1:42001884-42001903 | MS.gene09373:CDS | 35.0% | |
| TAACTCATCTAGCGTAGAAA+AGG | - | chr4.1:42006297-42006316 | MS.gene09373:intron | 35.0% | |
| TACTTTGTAGTTCGTACCAT+AGG | - | chr4.1:42002171-42002190 | MS.gene09373:CDS | 35.0% | |
| TAGTTGTACCTCAATCTATG+GGG | - | chr4.1:42004036-42004055 | MS.gene09373:intron | 35.0% | |
| TATTTCCATATTCGGAGCAT+CGG | + | chr4.1:42006182-42006201 | None:intergenic | 35.0% | |
| TCAAAACCAGTTAATGTAGC+TGG | + | chr4.1:42001937-42001956 | None:intergenic | 35.0% | |
| TCCTGCAGAAAAGAGATATA+CGG | + | chr4.1:42005737-42005756 | None:intergenic | 35.0% | |
| TGAAAGGAAATTTAAGGAGG+CGG | - | chr4.1:42002939-42002958 | MS.gene09373:intron | 35.0% | |
| TGAATGGAGTAAATGTGATC+AGG | - | chr4.1:42005304-42005323 | MS.gene09373:intron | 35.0% | |
| TGTACATGTGATCTTGTAGT+CGG | + | chr4.1:42006229-42006248 | None:intergenic | 35.0% | |
| TTAAAACGATCAACACACCT+CGG | + | chr4.1:42003630-42003649 | None:intergenic | 35.0% | |
| ! | AAGGCCTATTTAGATTGGTT+TGG | + | chr4.1:42004591-42004610 | None:intergenic | 35.0% |
| ! | ACAGTTAGTACTGTTAGTCT+CGG | - | chr4.1:42002894-42002913 | MS.gene09373:intron | 35.0% |
| ! | AGGAATAAACTCTTTTGGCA+AGG | - | chr4.1:42005424-42005443 | MS.gene09373:intron | 35.0% |
| ! | CAGTTATTATGGAGAGCTTT+TGG | - | chr4.1:42004472-42004491 | MS.gene09373:CDS | 35.0% |
| ! | GAGGAAATTTGTTTGAGGTT+GGG | - | chr4.1:42002450-42002469 | MS.gene09373:intron | 35.0% |
| ! | GATTACTGTTGTTGGTTGAT+TGG | - | chr4.1:42001862-42001881 | MS.gene09373:CDS | 35.0% |
| ! | GGATATTTTCCGATATCATG+AGG | - | chr4.1:42006620-42006639 | MS.gene09373:CDS | 35.0% |
| ! | TACTGTTAGTCTCGGTATTT+AGG | - | chr4.1:42002902-42002921 | MS.gene09373:intron | 35.0% |
| ! | TGAGGAAATTTGTTTGAGGT+TGG | - | chr4.1:42002449-42002468 | MS.gene09373:intron | 35.0% |
| ! | TGATTACCTTGGTCTTCAAA+CGG | - | chr4.1:42005181-42005200 | MS.gene09373:intron | 35.0% |
| ! | TTTTTGCCAGCTACATTAAC+TGG | - | chr4.1:42001928-42001947 | MS.gene09373:CDS | 35.0% |
| !! | ACTGCATTGATTACTGTTGT+TGG | - | chr4.1:42001854-42001873 | MS.gene09373:CDS | 35.0% |
| !! | ATGAAGCAGAAAAGCATTGT+TGG | - | chr4.1:42003885-42003904 | MS.gene09373:intron | 35.0% |
| !! | CCAACAGGGAATTTTATTTG+TGG | - | chr4.1:42003079-42003098 | MS.gene09373:CDS | 35.0% |
| !! | GCCTTTCTTTTAGGAACATT+TGG | + | chr4.1:42005848-42005867 | None:intergenic | 35.0% |
| !! | TCATTTTTCATCCTCAAACC+AGG | + | chr4.1:42001973-42001992 | None:intergenic | 35.0% |
| !! | TCTCAACCCATTTTAGGAAA+TGG | + | chr4.1:42004076-42004095 | None:intergenic | 35.0% |
| !! | TTATTTTGTCCGTTTCTGCA+TGG | - | chr4.1:42005625-42005644 | MS.gene09373:intron | 35.0% |
| !!! | TTTTTTGTGTGGTGGCAATT+AGG | - | chr4.1:42003387-42003406 | MS.gene09373:intron | 35.0% |
| ACGATGCGACAATAAAGCTT+AGG | + | chr4.1:42003767-42003786 | None:intergenic | 40.0% | |
| AGATGCTCTAACCAGCATAA+AGG | + | chr4.1:42003413-42003432 | None:intergenic | 40.0% | |
| AGCAAAGTAAAGTGAAGGAG+TGG | - | chr4.1:42001827-42001846 | MS.gene09373:CDS | 40.0% | |
| AGCAATCATGAATATCAGCC+CGG | - | chr4.1:42004151-42004170 | MS.gene09373:intron | 40.0% | |
| AGGATTTGAGAGAAAGAGAC+GGG | + | chr4.1:42002974-42002993 | None:intergenic | 40.0% | |
| AGTTGTACCTCAATCTATGG+GGG | - | chr4.1:42004037-42004056 | MS.gene09373:intron | 40.0% | |
| ATATACGTAGCCATTCCAGA+AGG | + | chr4.1:42006433-42006452 | None:intergenic | 40.0% | |
| ATCCGTATCCATGCTTCTTT+GGG | - | chr4.1:42004888-42004907 | MS.gene09373:CDS | 40.0% | |
| ATCCTGTTGTTCTTGTTCCT+GGG | - | chr4.1:42002010-42002029 | MS.gene09373:CDS | 40.0% | |
| ATCTCATTGATGCCAAAAGG+CGG | - | chr4.1:42005245-42005264 | MS.gene09373:intron | 40.0% | |
| ATGTGGTCTCATTTGCATTG+CGG | - | chr4.1:42002831-42002850 | MS.gene09373:intron | 40.0% | |
| CATCCAAGGCCTATTTAGAT+TGG | + | chr4.1:42004596-42004615 | None:intergenic | 40.0% | |
| CCTAAAAGAAAGGCTAGTAC+AGG | - | chr4.1:42005854-42005873 | MS.gene09373:intron | 40.0% | |
| CTGTTTAGGAAGAGATTGTG+GGG | - | chr4.1:42002084-42002103 | MS.gene09373:CDS | 40.0% | |
| CTTATGTGACTGTTTAGGAG+AGG | + | chr4.1:42004543-42004562 | None:intergenic | 40.0% | |
| CTTGCGAGTATGTAGAACTT+GGG | - | chr4.1:42005214-42005233 | MS.gene09373:intron | 40.0% | |
| GAAACAATTGTCGAGTCCAT+AGG | + | chr4.1:42004515-42004534 | None:intergenic | 40.0% | |
| GACTGTTTAGGAAGAGATTG+TGG | - | chr4.1:42002082-42002101 | MS.gene09373:CDS | 40.0% | |
| GGTAGTTGTACCTCAATCTA+TGG | - | chr4.1:42004034-42004053 | MS.gene09373:intron | 40.0% | |
| TAAACTTGGCATAGCCAACA+GGG | - | chr4.1:42003065-42003084 | MS.gene09373:CDS | 40.0% | |
| TAAATAGCCCCCATAGATTG+AGG | + | chr4.1:42004047-42004066 | None:intergenic | 40.0% | |
| TAAGGTGCAACTATGAAGCA+CGG | - | chr4.1:42004719-42004738 | MS.gene09373:intron | 40.0% | |
| TACACTTGATTCAGAAGCAG+AGG | - | chr4.1:42005478-42005497 | MS.gene09373:intron | 40.0% | |
| TACGAGGTAGTGTTCTTGAA+GGG | - | chr4.1:42006485-42006504 | MS.gene09373:CDS | 40.0% | |
| TATCCCTCACCTCATTTACA+AGG | + | chr4.1:42002994-42003013 | None:intergenic | 40.0% | |
| TATCCGTATCCATGCTTCTT+TGG | - | chr4.1:42004887-42004906 | MS.gene09373:CDS | 40.0% | |
| TCTTGCGAGTATGTAGAACT+TGG | - | chr4.1:42005213-42005232 | MS.gene09373:intron | 40.0% | |
| TGAATGGAACAGTACAGTAG+AGG | + | chr4.1:42005602-42005621 | None:intergenic | 40.0% | |
| TGGCAAGAATTGGTTACGAA+GGG | - | chr4.1:42003555-42003574 | MS.gene09373:intron | 40.0% | |
| TTAAACTTGGCATAGCCAAC+AGG | - | chr4.1:42003064-42003083 | MS.gene09373:CDS | 40.0% | |
| TTCACACATCCATGCAGAAA+CGG | + | chr4.1:42005637-42005656 | None:intergenic | 40.0% | |
| TTGGCAAGAATTGGTTACGA+AGG | - | chr4.1:42003554-42003573 | MS.gene09373:intron | 40.0% | |
| ! | AAGAAGCATGGATACGGATA+CGG | + | chr4.1:42004887-42004906 | None:intergenic | 40.0% |
| ! | ATATGCTTTTCACACCAACC+TGG | + | chr4.1:42004128-42004147 | None:intergenic | 40.0% |
| ! | ATTTCCATATTCGGAGCATC+GGG | + | chr4.1:42006181-42006200 | None:intergenic | 40.0% |
| ! | ATTTGTTTGAGGTTGGGACA+TGG | - | chr4.1:42002456-42002475 | MS.gene09373:intron | 40.0% |
| ! | CTCGGTATTTAGGACTGAAA+GGG | - | chr4.1:42002912-42002931 | MS.gene09373:intron | 40.0% |
| ! | GATGTTTTACGAGTTGCTTC+TGG | - | chr4.1:42006568-42006587 | MS.gene09373:CDS | 40.0% |
| ! | TCCGTATATCTCTTTTCTGC+AGG | - | chr4.1:42005733-42005752 | MS.gene09373:intron | 40.0% |
| ! | TCTCGGTATTTAGGACTGAA+AGG | - | chr4.1:42002911-42002930 | MS.gene09373:intron | 40.0% |
| ! | TGACTGTTTAGGAGAGGTTT+TGG | + | chr4.1:42004537-42004556 | None:intergenic | 40.0% |
| ! | TTTGAAGTGGTTGATTCACC+TGG | - | chr4.1:42001952-42001971 | MS.gene09373:CDS | 40.0% |
| ! | TTTGTTTGAGGTTGGGACAT+GGG | - | chr4.1:42002457-42002476 | MS.gene09373:intron | 40.0% |
| !! | CAACCCATTTTAGGAAATGG+AGG | + | chr4.1:42004073-42004092 | None:intergenic | 40.0% |
| !!! | CCTGTACTAGCCTTTCTTTT+AGG | + | chr4.1:42005857-42005876 | None:intergenic | 40.0% |
| AAAAGGCGGTGAAACCATCT+GGG | - | chr4.1:42005259-42005278 | MS.gene09373:intron | 45.0% | |
| AAACAACGAGGTAGTGTACG+AGG | - | chr4.1:42006469-42006488 | MS.gene09373:CDS | 45.0% | |
| AAAGGAAAGCGGGTGAGATT+AGG | + | chr4.1:42003812-42003831 | None:intergenic | 45.0% | |
| AAGGAAATTTAAGGAGGCGG+AGG | - | chr4.1:42002942-42002961 | MS.gene09373:intron | 45.0% | |
| AATATCAGCCCGGCATTTCT+CGG | - | chr4.1:42004161-42004180 | MS.gene09373:intron | 45.0% | |
| AGAACACGGTTCAATCCTTC+TGG | - | chr4.1:42006415-42006434 | MS.gene09373:CDS | 45.0% | |
| ATCATGTGTCGTGTCAGTGT+CGG | + | chr4.1:42004792-42004811 | None:intergenic | 45.0% | |
| ATCCCAGGAACAAGAACAAC+AGG | + | chr4.1:42002015-42002034 | None:intergenic | 45.0% | |
| ATCGCCTCCAATAGTTACAC+CGG | + | chr4.1:42006599-42006618 | None:intergenic | 45.0% | |
| CATCCTGTTGTTCTTGTTCC+TGG | - | chr4.1:42002009-42002028 | MS.gene09373:CDS | 45.0% | |
| CGAAGCAAGTAACTGCGAAA+CGG | + | chr4.1:42005450-42005469 | None:intergenic | 45.0% | |
| CGTTGCAAATGTAGCTGCAT+CGG | - | chr4.1:42002307-42002326 | MS.gene09373:intron | 45.0% | |
| CTAAACAGTCCATCAGCACA+AGG | + | chr4.1:42002072-42002091 | None:intergenic | 45.0% | |
| CTCTCTCTGCATAATGAGAC+TGG | - | chr4.1:42003431-42003450 | MS.gene09373:intron | 45.0% | |
| GGACTGAAAGGGTAGATGAA+AGG | - | chr4.1:42002923-42002942 | MS.gene09373:intron | 45.0% | |
| GTACGAGGTAGTGTTCTTGA+AGG | - | chr4.1:42006484-42006503 | MS.gene09373:CDS | 45.0% | |
| GTGTAACTATTGGAGGCGAT+AGG | - | chr4.1:42006599-42006618 | MS.gene09373:CDS | 45.0% | |
| GTTCAACCGTTTGAAGACCA+AGG | + | chr4.1:42005190-42005209 | None:intergenic | 45.0% | |
| TGGATTCGGGTCCTAATGAA+TGG | - | chr4.1:42005288-42005307 | MS.gene09373:intron | 45.0% | |
| TGGCAATTAGGCCTTTATGC+TGG | - | chr4.1:42003399-42003418 | MS.gene09373:intron | 45.0% | |
| ! | ACGGTTCAATCCTTCTGGAA+TGG | - | chr4.1:42006420-42006439 | MS.gene09373:CDS | 45.0% |
| ! | CACCCAAAGAAGCATGGATA+CGG | + | chr4.1:42004893-42004912 | None:intergenic | 45.0% |
| ! | TCTGCATAATGAGACTGGTC+TGG | - | chr4.1:42003436-42003455 | MS.gene09373:intron | 45.0% |
| ! | TGGTTGATTCACCTGGTTTG+AGG | - | chr4.1:42001959-42001978 | MS.gene09373:CDS | 45.0% |
| ! | TTTGGAACACCGAGAAATGC+CGG | + | chr4.1:42004173-42004192 | None:intergenic | 45.0% |
| !! | CTGGTTTGGAACTTTGGGAA+GGG | - | chr4.1:42002043-42002062 | MS.gene09373:CDS | 45.0% |
| !! | CTTGTGCTGATGGACTGTTT+AGG | - | chr4.1:42002070-42002089 | MS.gene09373:CDS | 45.0% |
| !! | GACTGCTGGTTTGGAACTTT+GGG | - | chr4.1:42002038-42002057 | MS.gene09373:CDS | 45.0% |
| !! | TGACTGCTGGTTTGGAACTT+TGG | - | chr4.1:42002037-42002056 | MS.gene09373:CDS | 45.0% |
| !!! | ATCAACACACCTCGGTGTTT+TGG | + | chr4.1:42003622-42003641 | None:intergenic | 45.0% |
| AAACCAGCAGTCACAATCCC+AGG | + | chr4.1:42002030-42002049 | None:intergenic | 50.0% | |
| AAAGGCGGTGAAACCATCTG+GGG | - | chr4.1:42005260-42005279 | MS.gene09373:intron | 50.0% | |
| AAATGTGATGAAGCGTGCCG+AGG | - | chr4.1:42005913-42005932 | MS.gene09373:intron | 50.0% | |
| AAGCCGCGACATCAAATCCA+CGG | + | chr4.1:42002857-42002876 | None:intergenic | 50.0% | |
| AAGGATGGCGCAGAAGAACA+CGG | - | chr4.1:42006401-42006420 | MS.gene09373:CDS | 50.0% | |
| ACATGGCTTCCTATGACTGG+AGG | - | chr4.1:42003588-42003607 | MS.gene09373:intron | 50.0% | |
| ACCATGACACGCCTAATCCA+AGG | + | chr4.1:42004750-42004769 | None:intergenic | 50.0% | |
| ACTACCCGATGCTCCGAATA+TGG | - | chr4.1:42006174-42006193 | MS.gene09373:intron | 50.0% | |
| ATAGCAGCGCTAAAGCGTAG+CGG | + | chr4.1:42006077-42006096 | None:intergenic | 50.0% | |
| ATGGATACGGATACGGACAC+CGG | + | chr4.1:42004880-42004899 | None:intergenic | 50.0% | |
| CAAAAGGCGGTGAAACCATC+TGG | - | chr4.1:42005258-42005277 | MS.gene09373:intron | 50.0% | |
| CGAAGGGAAGAACTTGCACA+TGG | - | chr4.1:42003571-42003590 | MS.gene09373:intron | 50.0% | |
| CTCAAGTGACTCCGTCTAGA+TGG | + | chr4.1:42003132-42003151 | None:intergenic | 50.0% | |
| GAAAGACAGCCTCCAGTCAT+AGG | + | chr4.1:42003600-42003619 | None:intergenic | 50.0% | |
| GAAGGGAGAAGTCTAGAGAG+CGG | - | chr4.1:42006502-42006521 | MS.gene09373:CDS | 50.0% | |
| GATTAGGCGTGTCATGGTGT+CGG | - | chr4.1:42004752-42004771 | MS.gene09373:intron | 50.0% | |
| GCAGTGATGCTGCATTTGTC+AGG | - | chr4.1:42004222-42004241 | MS.gene09373:intron | 50.0% | |
| GCTGTCTTTCCAAAACACCG+AGG | - | chr4.1:42003610-42003629 | MS.gene09373:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+TGG | - | chr4.1:42004730-42004749 | MS.gene09373:intron | 50.0% | |
| TCGGCACGCTTCATCACATT+TGG | + | chr4.1:42005914-42005933 | None:intergenic | 50.0% | |
| TGCACATGGCTTCCTATGAC+TGG | - | chr4.1:42003585-42003604 | MS.gene09373:intron | 50.0% | |
| TGTTCTTCTGCGCCATCCTT+TGG | + | chr4.1:42006401-42006420 | None:intergenic | 50.0% | |
| TTGGAACACCGAGAAATGCC+GGG | + | chr4.1:42004172-42004191 | None:intergenic | 50.0% | |
| ! | AGCGCGTGCCAACAACATTT+TGG | - | chr4.1:42006525-42006544 | MS.gene09373:CDS | 50.0% |
| ! | CAGATGGTTTCACCGCCTTT+TGG | + | chr4.1:42005260-42005279 | None:intergenic | 50.0% |
| ! | GCGCGTGCCAACAACATTTT+GGG | - | chr4.1:42006526-42006545 | MS.gene09373:CDS | 50.0% |
| ! | GCGGTGTCTCAACCCATTTT+AGG | + | chr4.1:42004082-42004101 | None:intergenic | 50.0% |
| ! | TCCTTGGATTAGGCGTGTCA+TGG | - | chr4.1:42004746-42004765 | MS.gene09373:intron | 50.0% |
| ! | TGGGATTGTGACTGCTGGTT+TGG | - | chr4.1:42002029-42002048 | MS.gene09373:CDS | 50.0% |
| ! | TTTTGCAGAGCCGTGACTTC+TGG | - | chr4.1:42005146-42005165 | MS.gene09373:intron | 50.0% |
| !! | GCTGGTTTGGAACTTTGGGA+AGG | - | chr4.1:42002042-42002061 | MS.gene09373:CDS | 50.0% |
| ACCCACCAGGAATTCGAGTC+AGG | - | chr4.1:42003459-42003478 | MS.gene09373:intron | 55.0% | |
| ATCGTCGGCAGCAACAAGCT+CGG | + | chr4.1:42003492-42003511 | None:intergenic | 55.0% | |
| CCCACCAGGAATTCGAGTCA+GGG | - | chr4.1:42003460-42003479 | MS.gene09373:intron | 55.0% | |
| CCCGTCAGAGAAATGAGCCT+CGG | + | chr4.1:42005933-42005952 | None:intergenic | 55.0% | |
| CCGAGGCTCATTTCTCTGAC+GGG | - | chr4.1:42005930-42005949 | MS.gene09373:intron | 55.0% | |
| CGCTTGCACCCAAAGAAGCA+TGG | + | chr4.1:42004899-42004918 | None:intergenic | 55.0% | |
| GAAGGGAGACCTTGTGCTGA+TGG | - | chr4.1:42002060-42002079 | MS.gene09373:CDS | 55.0% | |
| GCACGGACACTCCTTGGATT+AGG | - | chr4.1:42004736-42004755 | MS.gene09373:intron | 55.0% | |
| GCCACCGGTGTAACTATTGG+AGG | - | chr4.1:42006592-42006611 | MS.gene09373:CDS | 55.0% | |
| GCCGAGGCTCATTTCTCTGA+CGG | - | chr4.1:42005929-42005948 | MS.gene09373:intron | 55.0% | |
| GCCTCCAATAGTTACACCGG+TGG | + | chr4.1:42006596-42006615 | None:intergenic | 55.0% | |
| GGAGCCACCGGTGTAACTAT+TGG | - | chr4.1:42006589-42006608 | MS.gene09373:CDS | 55.0% | |
| GGTTCATGTGCGCCAAAGGA+TGG | - | chr4.1:42006386-42006405 | MS.gene09373:CDS | 55.0% | |
| GTCAATGTCCGTGTCGTGTC+CGG | - | chr4.1:42004858-42004877 | MS.gene09373:CDS | 55.0% | |
| GTTCCTGGGATTGTGACTGC+TGG | - | chr4.1:42002024-42002043 | MS.gene09373:CDS | 55.0% | |
| TCAGGGTTCATGTGCGCCAA+AGG | - | chr4.1:42006382-42006401 | MS.gene09373:CDS | 55.0% | |
| TCTCATTTGCATTGCGGCCG+TGG | - | chr4.1:42002837-42002856 | MS.gene09373:intron | 55.0% | |
| ! | ACTGCCCTGACTCGAATTCC+TGG | + | chr4.1:42003467-42003486 | None:intergenic | 55.0% |
| ! | ATCTGGGGCGACTTGGATTC+GGG | - | chr4.1:42005275-42005294 | MS.gene09373:intron | 55.0% |
| ! | CATCTGGGGCGACTTGGATT+CGG | - | chr4.1:42005274-42005293 | MS.gene09373:intron | 55.0% |
| ! | CCCTGACTCGAATTCCTGGT+GGG | + | chr4.1:42003463-42003482 | None:intergenic | 55.0% |
| ! | GCTGCCGACGATTTTGCTTC+TGG | - | chr4.1:42003500-42003519 | MS.gene09373:intron | 55.0% |
| ! | TGAAACCATCTGGGGCGACT+TGG | - | chr4.1:42005268-42005287 | MS.gene09373:intron | 55.0% |
| !!! | GCTGCATCGGCTGCTTTTGT+CGG | - | chr4.1:42002320-42002339 | MS.gene09373:intron | 55.0% |
| CGAATCCAAGTCGCCCCAGA+TGG | + | chr4.1:42005276-42005295 | None:intergenic | 60.0% | |
| CGGCCGTGGATTTGATGTCG+CGG | - | chr4.1:42002851-42002870 | MS.gene09373:intron | 60.0% | |
| GTTGAGACACCGCCTCCCAT+GGG | - | chr4.1:42004089-42004108 | MS.gene09373:intron | 60.0% | |
| TACGGACACCGGACACGACA+CGG | + | chr4.1:42004869-42004888 | None:intergenic | 60.0% | |
| TCGTCGGCAGCAACAAGCTC+GGG | + | chr4.1:42003491-42003510 | None:intergenic | 60.0% | |
| ! | GCCCTGACTCGAATTCCTGG+TGG | + | chr4.1:42003464-42003483 | None:intergenic | 60.0% |
| ! | TCATGGTGTCGGACACGCGT+CGG | - | chr4.1:42004763-42004782 | MS.gene09373:intron | 60.0% |
| !! | CGAGTTGCTTCTGGAGCCAC+CGG | - | chr4.1:42006577-42006596 | MS.gene09373:CDS | 60.0% |
| GGACCACCACCACCACCCAT+GGG | + | chr4.1:42004107-42004126 | None:intergenic | 65.0% | |
| GGTTGAGACACCGCCTCCCA+TGG | - | chr4.1:42004088-42004107 | MS.gene09373:intron | 65.0% | |
| TGGACCACCACCACCACCCA+TGG | + | chr4.1:42004108-42004127 | None:intergenic | 65.0% | |
| !! | ATGGGTGGTGGTGGTGGTCC+AGG | - | chr4.1:42004107-42004126 | MS.gene09373:intron | 65.0% |
| !! | GAGACTGGTCTGGACCCACC+AGG | - | chr4.1:42003446-42003465 | MS.gene09373:intron | 65.0% |
| !! | GTGGTGGTGGTGGTCCAGGT+TGG | - | chr4.1:42004111-42004130 | MS.gene09373:intron | 65.0% |
| ACACCGCCTCCCATGGGTGG+TGG | - | chr4.1:42004095-42004114 | MS.gene09373:intron | 70.0% | |
| CCACCACCACCACCCATGGG+AGG | + | chr4.1:42004104-42004123 | None:intergenic | 70.0% | |
| CCACCACCACCCATGGGAGG+CGG | + | chr4.1:42004101-42004120 | None:intergenic | 70.0% | |
| GAGACACCGCCTCCCATGGG+TGG | - | chr4.1:42004092-42004111 | MS.gene09373:intron | 70.0% | |
| !! | CCTCCCATGGGTGGTGGTGG+TGG | - | chr4.1:42004101-42004120 | MS.gene09373:intron | 70.0% |
| ! | CCGCCTCCCATGGGTGGTGG+TGG | - | chr4.1:42004098-42004117 | MS.gene09373:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 42001814 | 42006672 | 42001814 | ID=MS.gene09373 |
| chr4.1 | mRNA | 42001814 | 42006672 | 42001814 | ID=MS.gene09373.t1;Parent=MS.gene09373 |
| chr4.1 | exon | 42006353 | 42006672 | 42006353 | ID=MS.gene09373.t1.exon1;Parent=MS.gene09373.t1 |
| chr4.1 | CDS | 42006353 | 42006672 | 42006353 | ID=cds.MS.gene09373.t1;Parent=MS.gene09373.t1 |
| chr4.1 | exon | 42004855 | 42005077 | 42004855 | ID=MS.gene09373.t1.exon2;Parent=MS.gene09373.t1 |
| chr4.1 | CDS | 42004855 | 42005077 | 42004855 | ID=cds.MS.gene09373.t1;Parent=MS.gene09373.t1 |
| chr4.1 | exon | 42004243 | 42004526 | 42004243 | ID=MS.gene09373.t1.exon3;Parent=MS.gene09373.t1 |
| chr4.1 | CDS | 42004243 | 42004526 | 42004243 | ID=cds.MS.gene09373.t1;Parent=MS.gene09373.t1 |
| chr4.1 | exon | 42002987 | 42003332 | 42002987 | ID=MS.gene09373.t1.exon4;Parent=MS.gene09373.t1 |
| chr4.1 | CDS | 42002987 | 42003332 | 42002987 | ID=cds.MS.gene09373.t1;Parent=MS.gene09373.t1 |
| chr4.1 | exon | 42002466 | 42002731 | 42002466 | ID=MS.gene09373.t1.exon5;Parent=MS.gene09373.t1 |
| chr4.1 | CDS | 42002466 | 42002731 | 42002466 | ID=cds.MS.gene09373.t1;Parent=MS.gene09373.t1 |
| chr4.1 | exon | 42001814 | 42002312 | 42001814 | ID=MS.gene09373.t1.exon6;Parent=MS.gene09373.t1 |
| chr4.1 | CDS | 42001814 | 42002312 | 42001814 | ID=cds.MS.gene09373.t1;Parent=MS.gene09373.t1 |
| Gene Sequence |
| Protein sequence |
