Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09986.t1 | XP_013469316.1 | 96.8 | 343 | 11 | 0 | 67 | 409 | 43 | 385 | 9.20E-190 | 672.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09986.t1 | G4LTX4 | 73.7 | 350 | 90 | 2 | 60 | 408 | 26 | 374 | 6.3e-147 | 521.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09986.t1 | A0A072VN06 | 96.8 | 343 | 11 | 0 | 67 | 409 | 43 | 385 | 6.6e-190 | 672.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053330 | MS.gene09986 | 0.811488 | 6.83E-51 | -1.69E-46 |
| MS.gene05625 | MS.gene09986 | 0.806836 | 6.78E-50 | -1.69E-46 |
| MS.gene056305 | MS.gene09986 | 0.826877 | 2.13E-54 | -1.69E-46 |
| MS.gene056442 | MS.gene09986 | 0.802316 | 5.95E-49 | -1.69E-46 |
| MS.gene059247 | MS.gene09986 | 0.809478 | 1.85E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09986.t1 | MTR_1g090867 | 96.512 | 344 | 12 | 0 | 66 | 409 | 42 | 385 | 0.0 | 690 |
| MS.gene09986.t1 | MTR_3g094300 | 45.178 | 197 | 100 | 4 | 92 | 286 | 66 | 256 | 2.76e-44 | 155 |
| MS.gene09986.t1 | MTR_7g034465 | 32.246 | 276 | 167 | 10 | 118 | 381 | 222 | 489 | 3.44e-33 | 130 |
| MS.gene09986.t1 | MTR_7g034465 | 31.858 | 226 | 142 | 7 | 118 | 334 | 328 | 550 | 2.99e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09986.t1 | AT3G52180 | 68.197 | 305 | 97 | 0 | 98 | 402 | 68 | 372 | 3.32e-157 | 448 |
| MS.gene09986.t1 | AT3G52180 | 67.626 | 278 | 90 | 0 | 126 | 403 | 1 | 278 | 1.54e-142 | 407 |
| MS.gene09986.t1 | AT3G52180 | 75.587 | 213 | 52 | 0 | 98 | 310 | 68 | 280 | 4.04e-117 | 343 |
| MS.gene09986.t1 | AT3G52180 | 75.587 | 213 | 52 | 0 | 98 | 310 | 68 | 280 | 9.72e-117 | 342 |
| MS.gene09986.t1 | AT3G10940 | 41.546 | 207 | 112 | 5 | 84 | 286 | 51 | 252 | 1.26e-44 | 156 |
| MS.gene09986.t1 | AT3G01510 | 31.716 | 268 | 162 | 8 | 118 | 372 | 140 | 399 | 7.07e-33 | 129 |
| MS.gene09986.t1 | AT3G01510 | 31.716 | 268 | 162 | 8 | 118 | 372 | 140 | 399 | 7.07e-33 | 129 |
| MS.gene09986.t1 | AT3G01510 | 31.716 | 268 | 162 | 8 | 118 | 372 | 282 | 541 | 3.09e-32 | 129 |
| MS.gene09986.t1 | AT3G52526 | 41.441 | 111 | 28 | 2 | 117 | 227 | 21 | 94 | 8.23e-17 | 75.9 |
Find 96 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATACTAGTTAGATATTT+TGG | 0.114827 | 1.4:-72238708 | MS.gene09986:intron |
| CTGTTTGTCATCGAAATTTA+AGG | 0.130911 | 1.4:+72235638 | None:intergenic |
| TGCTCTACGGTGGAAATTTC+AGG | 0.182783 | 1.4:-72236064 | MS.gene09986:CDS |
| TTCAGTTGGCATATATGTTT+TGG | 0.189491 | 1.4:-72237276 | MS.gene09986:intron |
| AAACAGAATAATAGAGTTTC+TGG | 0.199837 | 1.4:-72234488 | MS.gene09986:CDS |
| CTTTGGTACTTAAAGCTTAC+AGG | 0.220091 | 1.4:-72236130 | MS.gene09986:intron |
| GTTGACATGGCCATCTTTAT+TGG | 0.230768 | 1.4:+72234873 | None:intergenic |
| TTTCTTGTGCAGGCTGCTTC+TGG | 0.237212 | 1.4:-72239654 | MS.gene09986:intron |
| TTGACTTATAGGCATGAATT+AGG | 0.265240 | 1.4:-72239047 | MS.gene09986:CDS |
| GAAATTTCAGGACTTGATAT+TGG | 0.272062 | 1.4:-72236052 | MS.gene09986:CDS |
| CGCAGTTTATCAACGTCTTC+AGG | 0.287983 | 1.4:+72238873 | None:intergenic |
| TATAAGGCAATTAATTCTAA+TGG | 0.309780 | 1.4:-72238157 | MS.gene09986:CDS |
| CTTAAATTTCGATGACAAAC+AGG | 0.311977 | 1.4:-72235637 | MS.gene09986:CDS |
| TGTAATTAGCAAATTATATA+AGG | 0.327149 | 1.4:-72238173 | MS.gene09986:CDS |
| ATCCTTCCGGACTTGATTGT+TGG | 0.328796 | 1.4:-72239008 | MS.gene09986:CDS |
| TGATCTACGAAAGCGGCTTC+CGG | 0.349920 | 1.4:-72238197 | MS.gene09986:CDS |
| TTGACATGGCCATCTTTATT+GGG | 0.352754 | 1.4:+72234874 | None:intergenic |
| CGTTCATCCTTCGTGAGATC+AGG | 0.360339 | 1.4:+72234511 | None:intergenic |
| TTCTTCTTCTTCTCTATCCC+TGG | 0.361202 | 1.4:-72240737 | MS.gene09986:CDS |
| TGAGGCTAATACACTACTTC+TGG | 0.368444 | 1.4:-72237233 | MS.gene09986:intron |
| GTTGATAAACTGCGTAAAAT+CGG | 0.380846 | 1.4:-72238864 | MS.gene09986:CDS |
| TCGATGACAAACAGGGTTCA+TGG | 0.384520 | 1.4:-72235629 | MS.gene09986:CDS |
| CAGTGGCCGTGCCTCCCTTC+GGG | 0.392669 | 1.4:-72234554 | MS.gene09986:CDS |
| AATAAATAGACTCACAATAT+CGG | 0.395842 | 1.4:+72236568 | None:intergenic |
| AAAGTGACAGGCTTCTTACT+AGG | 0.410763 | 1.4:+72236106 | None:intergenic |
| GATGGTTCAGAGATCCTCAT+TGG | 0.427242 | 1.4:+72234456 | None:intergenic |
| ACAGTGGCCGTGCCTCCCTT+CGG | 0.430443 | 1.4:-72234555 | MS.gene09986:CDS |
| CATTCCAACCATGCTACTTA+AGG | 0.435096 | 1.4:-72240595 | MS.gene09986:intron |
| TGTTTGTCATCGAAATTTAA+GGG | 0.437209 | 1.4:+72235639 | None:intergenic |
| ACATATATACATTGCACTGC+TGG | 0.440089 | 1.4:-72238127 | MS.gene09986:CDS |
| TTTCAGGACTTGATATTGGA+TGG | 0.457996 | 1.4:-72236048 | MS.gene09986:CDS |
| GAGTACAAGTACATTGTTGA+TGG | 0.462857 | 1.4:-72234934 | MS.gene09986:CDS |
| AACACTTGCGTGCTGAGATA+AGG | 0.464011 | 1.4:-72238635 | MS.gene09986:intron |
| ACAAAGATAGATAGCATACC+AGG | 0.464659 | 1.4:+72240719 | None:intergenic |
| GAACTACAACTTCATCCTTC+CGG | 0.473825 | 1.4:-72239021 | MS.gene09986:CDS |
| AAGGTCATGCTGTCCAAAGC+TGG | 0.475543 | 1.4:-72236612 | MS.gene09986:CDS |
| AAGATATTGTGGTGGCGAGC+AGG | 0.477727 | 1.4:+72240775 | None:intergenic |
| TCCCTTCGGGAGAGAGTGAC+TGG | 0.483806 | 1.4:-72234541 | MS.gene09986:CDS |
| ATACATTGCACTGCTGGACT+TGG | 0.499456 | 1.4:-72238121 | MS.gene09986:CDS |
| AAGAGACATACCGCAACAGC+TGG | 0.503978 | 1.4:+72238091 | None:intergenic |
| AGTACATTGTTGATGGAGAA+TGG | 0.504240 | 1.4:-72234927 | MS.gene09986:CDS |
| TTCAGGACTTGATATTGGAT+GGG | 0.505174 | 1.4:-72236047 | MS.gene09986:CDS |
| GGGTTCATGGTTTCTCAAGA+AGG | 0.505456 | 1.4:-72235616 | MS.gene09986:CDS |
| TTCAGAATCTGAATCTTCCC+AGG | 0.507017 | 1.4:-72240923 | MS.gene09986:intron |
| ATGGCCATCTTTATTGGGAG+AGG | 0.509356 | 1.4:+72234879 | None:intergenic |
| TCAGGACTTGATATTGGATG+GGG | 0.510634 | 1.4:-72236046 | MS.gene09986:CDS |
| GATTGTTGGATCATGCCTGC+AGG | 0.516289 | 1.4:-72238994 | MS.gene09986:intron |
| CTTCGATAAAATTGTTGACA+TGG | 0.518353 | 1.4:+72234860 | None:intergenic |
| ATGACAGAAGCCATGGGTGC+TGG | 0.521445 | 1.4:-72239558 | MS.gene09986:intron |
| ATGGTTCAGAGATCCTCATT+GGG | 0.525064 | 1.4:+72234457 | None:intergenic |
| GTTACCTTAAGTAGCATGGT+TGG | 0.527020 | 1.4:+72240591 | None:intergenic |
| TTGTGGTGGCGAGCAGGAAG+AGG | 0.530076 | 1.4:+72240781 | None:intergenic |
| TGTCCCCACGACAAAGTGAC+AGG | 0.532631 | 1.4:+72236094 | None:intergenic |
| TATAATTTGCTAATTACAGC+CGG | 0.535250 | 1.4:+72238178 | None:intergenic |
| TGAAGTTACCTTAAGTAGCA+TGG | 0.535870 | 1.4:+72240587 | None:intergenic |
| GAGGAGGAGCAGATAGTGTG+TGG | 0.537058 | 1.4:+72240800 | None:intergenic |
| CATGATCCAACAATCAAGTC+CGG | 0.539623 | 1.4:+72239002 | None:intergenic |
| TAGCTCTGATGTCGAGGAGG+AGG | 0.541130 | 1.4:-72239607 | MS.gene09986:CDS |
| AAGATGGAAGAAAGATATTG+TGG | 0.550960 | 1.4:+72240764 | None:intergenic |
| GTAACCTCTCCCAATAAAGA+TGG | 0.550991 | 1.4:-72234883 | MS.gene09986:CDS |
| GGGACACCGCAATTGCTCTA+CGG | 0.552218 | 1.4:-72236077 | MS.gene09986:CDS |
| CTCTCTCCCGAAGGGAGGCA+CGG | 0.552342 | 1.4:+72234548 | None:intergenic |
| TCTGGAAGCTCTTCCCAATG+AGG | 0.552898 | 1.4:-72234470 | MS.gene09986:CDS |
| GACAAGTAGCTCTGATGTCG+AGG | 0.561197 | 1.4:-72239613 | MS.gene09986:CDS |
| TTGAATGTCATTGCATGTGT+TGG | 0.565530 | 1.4:+72238656 | None:intergenic |
| TAATAACATGACAGAAGCCA+TGG | 0.567902 | 1.4:-72239565 | MS.gene09986:CDS |
| TGGAAGAGCTCCAGCTGTTG+CGG | 0.568883 | 1.4:-72238101 | MS.gene09986:intron |
| AAGTGACAGGCTTCTTACTA+GGG | 0.570425 | 1.4:+72236107 | None:intergenic |
| CACCAGTCACTCTCTCCCGA+AGG | 0.571656 | 1.4:+72234539 | None:intergenic |
| TGGTGGCGAGCAGGAAGAGG+AGG | 0.575579 | 1.4:+72240784 | None:intergenic |
| GAGCTACTTGTCTCTGCACT+CGG | 0.576263 | 1.4:+72239624 | None:intergenic |
| GGCCACTGTCCGCATCATCA+AGG | 0.584686 | 1.4:+72234569 | None:intergenic |
| GAAGCCTGTCACTTTGTCGT+GGG | 0.585071 | 1.4:-72236098 | MS.gene09986:CDS |
| ATTAAACATACCAGCACCCA+TGG | 0.588156 | 1.4:+72239548 | None:intergenic |
| ACCAGTCACTCTCTCCCGAA+GGG | 0.593295 | 1.4:+72234540 | None:intergenic |
| AGAAGCCTGTCACTTTGTCG+TGG | 0.601786 | 1.4:-72236099 | MS.gene09986:CDS |
| TGTGTTGGCATATTCTCGTA+TGG | 0.603422 | 1.4:+72238671 | None:intergenic |
| TGAACAGGTCCTTGATGATG+CGG | 0.604730 | 1.4:-72234578 | MS.gene09986:intron |
| GTCCTTGATGATGCGGACAG+TGG | 0.606712 | 1.4:-72234571 | MS.gene09986:CDS |
| TTTCCACCGTAGAGCAATTG+CGG | 0.609902 | 1.4:+72236071 | None:intergenic |
| AAGGCAATTAATTCTAATGG+AGG | 0.612848 | 1.4:-72238154 | MS.gene09986:CDS |
| ATCCAACAATCAAGTCCGGA+AGG | 0.629842 | 1.4:+72239006 | None:intergenic |
| TGTGTGGAATTGTAAAACAG+AGG | 0.637298 | 1.4:+72240816 | None:intergenic |
| ATTCATTTGATCTACGAAAG+CGG | 0.641783 | 1.4:-72238204 | MS.gene09986:CDS |
| TTAAATTTCGATGACAAACA+GGG | 0.643133 | 1.4:-72235636 | MS.gene09986:CDS |
| ATGGAAGAAAGATATTGTGG+TGG | 0.657505 | 1.4:+72240767 | None:intergenic |
| AAGTAGCTCTGATGTCGAGG+AGG | 0.659228 | 1.4:-72239610 | MS.gene09986:CDS |
| ACACCGCAATTGCTCTACGG+TGG | 0.661178 | 1.4:-72236074 | MS.gene09986:CDS |
| AGTCACTCTCTCCCGAAGGG+AGG | 0.664364 | 1.4:+72234543 | None:intergenic |
| GTGGAATTGTAAAACAGAGG+AGG | 0.665928 | 1.4:+72240819 | None:intergenic |
| CAGGACTTGATATTGGATGG+GGG | 0.671888 | 1.4:-72236045 | MS.gene09986:CDS |
| AAGCCTGTCACTTTGTCGTG+GGG | 0.672587 | 1.4:-72236097 | MS.gene09986:CDS |
| AATAACATGACAGAAGCCAT+GGG | 0.682029 | 1.4:-72239564 | MS.gene09986:CDS |
| TCAGGGTTATAAACTCAATG+AGG | 0.689279 | 1.4:-72237251 | MS.gene09986:CDS |
| CAAAGATAGATAGCATACCA+GGG | 0.698445 | 1.4:+72240720 | None:intergenic |
| TGATGATCCTGATCTCACGA+AGG | 0.730198 | 1.4:-72234518 | MS.gene09986:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGTAATTTTACATTAAA+CGG | + | chr1.4:72240499-72240518 | None:intergenic | 10.0% |
| !!! | ATAAGAAAAATATCAATTTT+AGG | + | chr1.4:72238122-72238141 | None:intergenic | 10.0% |
| !!! | ATTTATTCAAAACATTTTAT+AGG | - | chr1.4:72240191-72240210 | MS.gene09986:intron | 10.0% |
| !! | AAAAATTACTAATAAAAAGG+TGG | - | chr1.4:72234571-72234590 | MS.gene09986:CDS | 15.0% |
| !! | AAATGTTGTAAAATCAATTT+CGG | + | chr1.4:72238594-72238613 | None:intergenic | 15.0% |
| !! | AAGGAAAAAATAAAAAGTAA+AGG | + | chr1.4:72235098-72235117 | None:intergenic | 15.0% |
| !! | ATAATATCAAATAAGAATGA+GGG | + | chr1.4:72238792-72238811 | None:intergenic | 15.0% |
| !! | ATCAACAATACAATAAAATA+AGG | - | chr1.4:72240156-72240175 | MS.gene09986:intron | 15.0% |
| !! | CATAATAAACAAAATTGTTT+AGG | + | chr1.4:72236866-72236885 | None:intergenic | 15.0% |
| !! | CATTAACTTTCTAAATTAAA+AGG | + | chr1.4:72239687-72239706 | None:intergenic | 15.0% |
| !! | TATAATATCAAATAAGAATG+AGG | + | chr1.4:72238793-72238812 | None:intergenic | 15.0% |
| !! | TCAACAATACAATAAAATAA+GGG | - | chr1.4:72240157-72240176 | MS.gene09986:intron | 15.0% |
| !! | TGTAATTAGCAAATTATATA+AGG | - | chr1.4:72237485-72237504 | MS.gene09986:intron | 15.0% |
| !! | TTTAACATTAAAATAAAGCT+TGG | + | chr1.4:72236163-72236182 | None:intergenic | 15.0% |
| !! | TTTGTTTATATAGAAAGATA+GGG | - | chr1.4:72238083-72238102 | MS.gene09986:intron | 15.0% |
| !!! | ATTTATATATAACTTTGAAG+AGG | + | chr1.4:72235182-72235201 | None:intergenic | 15.0% |
| !!! | TTAATACTAGTTAGATATTT+TGG | - | chr1.4:72236950-72236969 | MS.gene09986:intron | 15.0% |
| !!! | TTTTGTTTATATAGAAAGAT+AGG | - | chr1.4:72238082-72238101 | MS.gene09986:intron | 15.0% |
| !! | AAACATGATAAATGTTGTAA+TGG | + | chr1.4:72239779-72239798 | None:intergenic | 20.0% |
| !! | AAAGGAAAACATTTGTTTAA+TGG | + | chr1.4:72239331-72239350 | None:intergenic | 20.0% |
| !! | AAGATAAAGTGATTTATGTT+TGG | - | chr1.4:72235287-72235306 | MS.gene09986:intron | 20.0% |
| !! | AATAAATAGACTCACAATAT+CGG | + | chr1.4:72239093-72239112 | None:intergenic | 20.0% |
| !! | ACTTAGTTATTTGTGAATTA+TGG | - | chr1.4:72238714-72238733 | MS.gene09986:intron | 20.0% |
| !! | ATAAAAATAAAAGAAGTCAG+AGG | + | chr1.4:72236749-72236768 | None:intergenic | 20.0% |
| !! | ATGCAAATATTATAAACACA+AGG | + | chr1.4:72236482-72236501 | None:intergenic | 20.0% |
| !! | CATTAACCATTATTTATCTT+TGG | - | chr1.4:72239511-72239530 | MS.gene09986:intron | 20.0% |
| !! | CTTAGTTTATTTCAATAAAC+CGG | - | chr1.4:72240655-72240674 | MS.gene09986:intron | 20.0% |
| !! | GATAAATATCACTTGAAATT+TGG | + | chr1.4:72238322-72238341 | None:intergenic | 20.0% |
| !! | TAAGTACCAAAGATAAATAA+TGG | + | chr1.4:72239520-72239539 | None:intergenic | 20.0% |
| !! | TATAAGGCAATTAATTCTAA+TGG | - | chr1.4:72237501-72237520 | MS.gene09986:intron | 20.0% |
| !! | TTAAAACACAAGAAAATTTC+TGG | - | chr1.4:72238026-72238045 | MS.gene09986:intron | 20.0% |
| !! | TTAACATTTCTATTTACTCA+TGG | - | chr1.4:72237329-72237348 | MS.gene09986:intron | 20.0% |
| !! | TTAATATGTTGTACAAAGAA+AGG | - | chr1.4:72237693-72237712 | MS.gene09986:intron | 20.0% |
| !! | TTTATATCAACTCGAATATT+TGG | - | chr1.4:72239449-72239468 | MS.gene09986:intron | 20.0% |
| !! | TTTCGGAAAGAAAAAAAAAA+TGG | + | chr1.4:72238577-72238596 | None:intergenic | 20.0% |
| !!! | AATCAAACATTCTTGTTTTT+GGG | + | chr1.4:72235936-72235955 | None:intergenic | 20.0% |
| !!! | ACATGGAGATATTTTTTAAA+TGG | - | chr1.4:72239714-72239733 | MS.gene09986:intron | 20.0% |
| !!! | AGAAATTTTCTTGTGTTTTA+AGG | + | chr1.4:72238027-72238046 | None:intergenic | 20.0% |
| !!! | AGAATTGATTTTATCATATC+TGG | + | chr1.4:72235513-72235532 | None:intergenic | 20.0% |
| !!! | ATATTCGAGTTGATATAAAA+AGG | + | chr1.4:72239448-72239467 | None:intergenic | 20.0% |
| !!! | ATTTGATGATTAATTCTTCT+TGG | - | chr1.4:72238944-72238963 | MS.gene09986:intron | 20.0% |
| !!! | ATTTTGAGTGAATTGATTTA+AGG | - | chr1.4:72235436-72235455 | MS.gene09986:intron | 20.0% |
| !!! | TAATCAAACATTCTTGTTTT+TGG | + | chr1.4:72235937-72235956 | None:intergenic | 20.0% |
| !!! | TATGTTTTTGAGTTAATTCT+TGG | - | chr1.4:72237645-72237664 | MS.gene09986:intron | 20.0% |
| !!! | TATTCGAGTTGATATAAAAA+GGG | + | chr1.4:72239447-72239466 | None:intergenic | 20.0% |
| !!! | TTACAACATTTATCATGTTT+TGG | - | chr1.4:72239779-72239798 | MS.gene09986:intron | 20.0% |
| ! | AAACAGAATAATAGAGTTTC+TGG | - | chr1.4:72241170-72241189 | MS.gene09986:intron | 25.0% |
| ! | AAAGTTAATGCTACATTACA+TGG | - | chr1.4:72239697-72239716 | MS.gene09986:intron | 25.0% |
| ! | AAATTCCAACAGAAAAACAA+AGG | + | chr1.4:72239822-72239841 | None:intergenic | 25.0% |
| ! | AAGTCACTAAAGTTTAATTC+AGG | + | chr1.4:72238552-72238571 | None:intergenic | 25.0% |
| ! | AATTGATAGATGAAGTTGAA+AGG | + | chr1.4:72235117-72235136 | None:intergenic | 25.0% |
| ! | AGCTATATGACATAAAGAAA+GGG | + | chr1.4:72238912-72238931 | None:intergenic | 25.0% |
| ! | ATAATCATTGAAGAGCTTAT+CGG | - | chr1.4:72237100-72237119 | MS.gene09986:intron | 25.0% |
| ! | ATCATATCTGGATGATTTAA+AGG | + | chr1.4:72235501-72235520 | None:intergenic | 25.0% |
| ! | ATGCTATTGAGAAATCTAAA+AGG | + | chr1.4:72235585-72235604 | None:intergenic | 25.0% |
| ! | ATTGAAGCTATTATACCATT+TGG | + | chr1.4:72240470-72240489 | None:intergenic | 25.0% |
| ! | ATTTATCAGTTTATCTCCAT+TGG | - | chr1.4:72238335-72238354 | MS.gene09986:intron | 25.0% |
| ! | CAATTTCAATTTCAATTTCG+AGG | - | chr1.4:72235138-72235157 | MS.gene09986:intron | 25.0% |
| ! | CTATGCAGTTGTTAATTTAA+AGG | - | chr1.4:72240097-72240116 | MS.gene09986:intron | 25.0% |
| ! | CTCTCTTAATACATTAGTAA+TGG | - | chr1.4:72234972-72234991 | MS.gene09986:intron | 25.0% |
| ! | GACTGTATTTAATAACCAAA+TGG | - | chr1.4:72240452-72240471 | MS.gene09986:intron | 25.0% |
| ! | TAAAGTGATTTATGTTTGGA+TGG | - | chr1.4:72235291-72235310 | MS.gene09986:intron | 25.0% |
| ! | TAAAGTTTAATTCAGGCAAT+TGG | + | chr1.4:72238545-72238564 | None:intergenic | 25.0% |
| ! | TCAAATTAGAACTACAAAGT+AGG | + | chr1.4:72236296-72236315 | None:intergenic | 25.0% |
| ! | TCTCTCTATCTTATGTATAT+GGG | - | chr1.4:72240426-72240445 | MS.gene09986:intron | 25.0% |
| ! | TCTGTTAAGAATTTAGTTGT+CGG | - | chr1.4:72240608-72240627 | MS.gene09986:CDS | 25.0% |
| ! | TGTTTGTCATCGAAATTTAA+GGG | + | chr1.4:72240022-72240041 | None:intergenic | 25.0% |
| ! | TTAAATTTCGATGACAAACA+GGG | - | chr1.4:72240022-72240041 | MS.gene09986:intron | 25.0% |
| ! | TTATGTAGCAAATTTGTCAA+GGG | - | chr1.4:72239229-72239248 | MS.gene09986:intron | 25.0% |
| ! | TTATTTGTGAATTATGGAAC+AGG | - | chr1.4:72238720-72238739 | MS.gene09986:intron | 25.0% |
| ! | TTCTCTCTATCTTATGTATA+TGG | - | chr1.4:72240425-72240444 | MS.gene09986:intron | 25.0% |
| ! | TTCTGATTCTTTATATGCTA+AGG | - | chr1.4:72238851-72238870 | MS.gene09986:CDS | 25.0% |
| ! | TTTATGTAGCAAATTTGTCA+AGG | - | chr1.4:72239228-72239247 | MS.gene09986:intron | 25.0% |
| !! | ACAAATGTTTTCCTTTGAAT+AGG | - | chr1.4:72239335-72239354 | MS.gene09986:intron | 25.0% |
| !! | ACTCTATCTTCATAGTATTT+TGG | + | chr1.4:72238211-72238230 | None:intergenic | 25.0% |
| !! | ATCATTTAAAACAGGGAATT+CGG | + | chr1.4:72235662-72235681 | None:intergenic | 25.0% |
| !! | ATTATACATTAGGGCTTTTA+TGG | - | chr1.4:72237982-72238001 | MS.gene09986:intron | 25.0% |
| !! | CATCTAATAAAGTAGCTTTA+TGG | - | chr1.4:72240389-72240408 | MS.gene09986:intron | 25.0% |
| !! | GCTTTTATGGTTGTATTTTA+GGG | - | chr1.4:72237995-72238014 | MS.gene09986:intron | 25.0% |
| !!! | AAAAAACTCAGAAGCATTTT+GGG | - | chr1.4:72236327-72236346 | MS.gene09986:intron | 25.0% |
| !!! | ACATTTTAGTATGTCTATTG+AGG | - | chr1.4:72238481-72238500 | MS.gene09986:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | + | chr1.4:72235400-72235419 | None:intergenic | 25.0% |
| !!! | ATCTTCATAGTATTTTGGAT+TGG | + | chr1.4:72238206-72238225 | None:intergenic | 25.0% |
| !!! | ATTCTTTTTTGAGTCATTAG+AGG | - | chr1.4:72241009-72241028 | MS.gene09986:intron | 25.0% |
| !!! | ATTGTTTTACTCAAAAACTG+AGG | - | chr1.4:72238822-72238841 | MS.gene09986:CDS | 25.0% |
| !!! | CATATGTTGGTTTTCAATTT+TGG | + | chr1.4:72235554-72235573 | None:intergenic | 25.0% |
| !!! | GTTTCTTTTTGTTTCACTTA+TGG | - | chr1.4:72236686-72236705 | MS.gene09986:intron | 25.0% |
| !!! | GTTTTTGAGTAAAACAATTG+AGG | + | chr1.4:72238820-72238839 | None:intergenic | 25.0% |
| !!! | TATAATTTGCTAATTACAGC+CGG | + | chr1.4:72237483-72237502 | None:intergenic | 25.0% |
| AAGATGGAAGAAAGATATTG+TGG | + | chr1.4:72234897-72234916 | None:intergenic | 30.0% | |
| AAGCAGTTTACTAGTTAATG+GGG | + | chr1.4:72239749-72239768 | None:intergenic | 30.0% | |
| AAGGCAATTAATTCTAATGG+AGG | - | chr1.4:72237504-72237523 | MS.gene09986:intron | 30.0% | |
| AAGTTTCAACTACGTAGTTT+AGG | - | chr1.4:72240829-72240848 | MS.gene09986:intron | 30.0% | |
| AGAGATAGAAAAACAAATCC+AGG | + | chr1.4:72240301-72240320 | None:intergenic | 30.0% | |
| AGATAACCTATGTGTATTGA+AGG | - | chr1.4:72235634-72235653 | MS.gene09986:CDS | 30.0% | |
| ATTCATTTGATCTACGAAAG+CGG | - | chr1.4:72237454-72237473 | MS.gene09986:intron | 30.0% | |
| ATTGAGTGATGTAATTCTGT+AGG | - | chr1.4:72235784-72235803 | MS.gene09986:intron | 30.0% | |
| ATTTGCATTCGACTCAAATT+TGG | - | chr1.4:72236494-72236513 | MS.gene09986:intron | 30.0% | |
| ATTTGCATTTCAGACTGTTA+TGG | - | chr1.4:72240540-72240559 | MS.gene09986:intron | 30.0% | |
| CACATGAAGTAGAAGTTATT+AGG | + | chr1.4:72235960-72235979 | None:intergenic | 30.0% | |
| CCCTAATGTATAATTAACGA+CGG | + | chr1.4:72237976-72237995 | None:intergenic | 30.0% | |
| CCGTCGTTAATTATACATTA+GGG | - | chr1.4:72237973-72237992 | MS.gene09986:intron | 30.0% | |
| CTGTTTGTCATCGAAATTTA+AGG | + | chr1.4:72240023-72240042 | None:intergenic | 30.0% | |
| CTTAAATTTCGATGACAAAC+AGG | - | chr1.4:72240021-72240040 | MS.gene09986:intron | 30.0% | |
| CTTCGATAAAATTGTTGACA+TGG | + | chr1.4:72240801-72240820 | None:intergenic | 30.0% | |
| GAAATTTCAGGACTTGATAT+TGG | - | chr1.4:72239606-72239625 | MS.gene09986:CDS | 30.0% | |
| GAAGCAGTTTACTAGTTAAT+GGG | + | chr1.4:72239750-72239769 | None:intergenic | 30.0% | |
| GACTGTCCAATCTAAATAAA+TGG | + | chr1.4:72235754-72235773 | None:intergenic | 30.0% | |
| GACTGTTATGGAATAATTAC+AGG | - | chr1.4:72240552-72240571 | MS.gene09986:intron | 30.0% | |
| GAGAAAGAGTCTAATTTAAG+AGG | + | chr1.4:72236256-72236275 | None:intergenic | 30.0% | |
| GAGATAGAAAAACAAATCCA+GGG | + | chr1.4:72240300-72240319 | None:intergenic | 30.0% | |
| GAGCTATATGACATAAAGAA+AGG | + | chr1.4:72238913-72238932 | None:intergenic | 30.0% | |
| GTATCAGAATATTACGATGA+AGG | + | chr1.4:72239863-72239882 | None:intergenic | 30.0% | |
| GTTAATTCTTGGTATACTGA+AGG | - | chr1.4:72237656-72237675 | MS.gene09986:intron | 30.0% | |
| GTTATGGAATAATTACAGGA+TGG | - | chr1.4:72240556-72240575 | MS.gene09986:intron | 30.0% | |
| GTTTAGCACATTGTTAGAAA+GGG | + | chr1.4:72236587-72236606 | None:intergenic | 30.0% | |
| TAATATTAGCGAACATGTGA+AGG | + | chr1.4:72236449-72236468 | None:intergenic | 30.0% | |
| TAATCATTGAAGAGCTTATC+GGG | - | chr1.4:72237101-72237120 | MS.gene09986:intron | 30.0% | |
| TAGTTGCATCACTATCAAAT+TGG | - | chr1.4:72238666-72238685 | MS.gene09986:CDS | 30.0% | |
| TCACTATCAAATTGGAAATC+TGG | - | chr1.4:72238674-72238693 | MS.gene09986:CDS | 30.0% | |
| TCCAATATTTCTTGTAATGC+TGG | - | chr1.4:72235007-72235026 | MS.gene09986:intron | 30.0% | |
| TCCAGCATTACAAGAAATAT+TGG | + | chr1.4:72235011-72235030 | None:intergenic | 30.0% | |
| TGAAGCAGTTTACTAGTTAA+TGG | + | chr1.4:72239751-72239770 | None:intergenic | 30.0% | |
| TGTTTAGCACATTGTTAGAA+AGG | + | chr1.4:72236588-72236607 | None:intergenic | 30.0% | |
| TTAGCAATCAATGATGTTGA+TGG | - | chr1.4:72235809-72235828 | MS.gene09986:intron | 30.0% | |
| TTCTTCATATTCAATGTACC+AGG | - | chr1.4:72240690-72240709 | MS.gene09986:intron | 30.0% | |
| TTGACTTATAGGCATGAATT+AGG | - | chr1.4:72236611-72236630 | MS.gene09986:CDS | 30.0% | |
| TTTCCTTTGAATAGGAATCA+TGG | - | chr1.4:72239343-72239362 | MS.gene09986:intron | 30.0% | |
| TTTGCTCTGCAAGAATAAAA+AGG | + | chr1.4:72239027-72239046 | None:intergenic | 30.0% | |
| ! | AAAAAGTGCATGACATACAA+TGG | + | chr1.4:72237402-72237421 | None:intergenic | 30.0% |
| ! | AACATCTGGACATCTTTTTA+TGG | + | chr1.4:72239165-72239184 | None:intergenic | 30.0% |
| ! | AGCTGAGATCATTTAAAACA+GGG | + | chr1.4:72235669-72235688 | None:intergenic | 30.0% |
| ! | ATAAAAAGGTGGTAGTGAAA+AGG | - | chr1.4:72234582-72234601 | MS.gene09986:intron | 30.0% |
| ! | ATGATCTCAGCTGTTAATTT+TGG | - | chr1.4:72235677-72235696 | MS.gene09986:intron | 30.0% |
| ! | ATTTTACTTCTCACAGCTTA+TGG | - | chr1.4:72237194-72237213 | MS.gene09986:intron | 30.0% |
| ! | CAAAGTAATAGATTTTTGCG+CGG | + | chr1.4:72237157-72237176 | None:intergenic | 30.0% |
| ! | GGCTTTTATGGTTGTATTTT+AGG | - | chr1.4:72237994-72238013 | MS.gene09986:intron | 30.0% |
| ! | GTTGATAAACTGCGTAAAAT+CGG | - | chr1.4:72236794-72236813 | MS.gene09986:intron | 30.0% |
| ! | TAAAAAGGTGGTAGTGAAAA+GGG | - | chr1.4:72234583-72234602 | MS.gene09986:intron | 30.0% |
| ! | TATAATTAACGACGGCTTTT+TGG | + | chr1.4:72237968-72237987 | None:intergenic | 30.0% |
| ! | TCAGTTGGCATATATGTTTT+GGG | - | chr1.4:72238383-72238402 | MS.gene09986:intron | 30.0% |
| ! | TCTCTGCCATTTATTTAGAT+TGG | - | chr1.4:72235745-72235764 | MS.gene09986:intron | 30.0% |
| ! | TGAAGAAACTTATTTCTCAC+CGG | + | chr1.4:72240677-72240696 | None:intergenic | 30.0% |
| ! | TTCAGTTGGCATATATGTTT+TGG | - | chr1.4:72238382-72238401 | MS.gene09986:intron | 30.0% |
| ! | TTTTACTTCTCACAGCTTAT+GGG | - | chr1.4:72237195-72237214 | MS.gene09986:intron | 30.0% |
| ! | TTTTATTCTTGCAGAGCAAA+AGG | - | chr1.4:72239027-72239046 | MS.gene09986:CDS | 30.0% |
| !! | AGAATACTGAAGAAAGTGTT+AGG | + | chr1.4:72236229-72236248 | None:intergenic | 30.0% |
| !! | TCTGAAATGCAAATTTTGTC+TGG | + | chr1.4:72240534-72240553 | None:intergenic | 30.0% |
| !! | TTCTAGAGTAGAATTCATTC+TGG | + | chr1.4:72235374-72235393 | None:intergenic | 30.0% |
| !!! | AAAAACTCAGAAGCATTTTG+GGG | - | chr1.4:72236328-72236347 | MS.gene09986:intron | 30.0% |
| !!! | ACAGTTTGTTTTGTTTCAGT+TGG | - | chr1.4:72238368-72238387 | MS.gene09986:intron | 30.0% |
| !!! | ATGTTGGTTTTCAATTTTGG+AGG | + | chr1.4:72235551-72235570 | None:intergenic | 30.0% |
| !!! | CAAAAAACTCAGAAGCATTT+TGG | - | chr1.4:72236326-72236345 | MS.gene09986:intron | 30.0% |
| !!! | CACATGTTTTTTTTACCATC+TGG | - | chr1.4:72240972-72240991 | MS.gene09986:intron | 30.0% |
| !!! | CACTTTTTCACATTATATCG+TGG | - | chr1.4:72237414-72237433 | MS.gene09986:intron | 30.0% |
| !!! | GCTAAACAGTTTTGACTTAT+AGG | - | chr1.4:72236600-72236619 | MS.gene09986:CDS | 30.0% |
| !!! | GCTTCTGAGTTTTTTGTTTT+TGG | + | chr1.4:72236322-72236341 | None:intergenic | 30.0% |
| !!! | GTTTGGTTTTAGTGTATGTT+CGG | - | chr1.4:72235207-72235226 | MS.gene09986:intron | 30.0% |
| !!! | TGTTGGTTTTCAATTTTGGA+GGG | + | chr1.4:72235550-72235569 | None:intergenic | 30.0% |
| !!! | TTTTGAAACGTTGCACATTT+TGG | - | chr1.4:72235833-72235852 | MS.gene09986:intron | 30.0% |
| AAAGAAAGCTAGCTAGAAGT+AGG | - | chr1.4:72235884-72235903 | MS.gene09986:intron | 35.0% | |
| AAAGGCTACTAAGCATATGT+TGG | + | chr1.4:72235567-72235586 | None:intergenic | 35.0% | |
| AACTCAAAGTTTGAGCTTTG+TGG | - | chr1.4:72238162-72238181 | MS.gene09986:CDS | 35.0% | |
| AATAACATGACAGAAGCCAT+GGG | - | chr1.4:72236094-72236113 | MS.gene09986:CDS | 35.0% | |
| AATCAGAAACTGTCTATGCA+AGG | + | chr1.4:72237250-72237269 | None:intergenic | 35.0% | |
| AATGTGAGCAATATATGCTG+TGG | + | chr1.4:72240897-72240916 | None:intergenic | 35.0% | |
| ACAAAGATAGATAGCATACC+AGG | + | chr1.4:72234942-72234961 | None:intergenic | 35.0% | |
| ACATATATACATTGCACTGC+TGG | - | chr1.4:72237531-72237550 | MS.gene09986:intron | 35.0% | |
| AGTTTCTGATTTCGTAGTAC+CGG | - | chr1.4:72237259-72237278 | MS.gene09986:CDS | 35.0% | |
| ATAGAAAAACAAATCCAGGG+AGG | + | chr1.4:72240297-72240316 | None:intergenic | 35.0% | |
| ATATCTCATGCTCTTTGAAC+AGG | - | chr1.4:72241065-72241084 | MS.gene09986:intron | 35.0% | |
| ATATGCTGTGGTACATTGTA+TGG | + | chr1.4:72240885-72240904 | None:intergenic | 35.0% | |
| ATGATAGAGAATAACGAACC+TGG | + | chr1.4:72234756-72234775 | None:intergenic | 35.0% | |
| ATGGAAGAAAGATATTGTGG+TGG | + | chr1.4:72234894-72234913 | None:intergenic | 35.0% | |
| ATTATAGCACACAATAGCAG+TGG | - | chr1.4:72237874-72237893 | MS.gene09986:intron | 35.0% | |
| ATTATATCGTGGATGTTGCA+GGG | - | chr1.4:72237425-72237444 | MS.gene09986:intron | 35.0% | |
| CAAAACAAACTGTTAGACAG+TGG | + | chr1.4:72238361-72238380 | None:intergenic | 35.0% | |
| CAAAGATAGATAGCATACCA+GGG | + | chr1.4:72234941-72234960 | None:intergenic | 35.0% | |
| CATATTCAATGTACCAGGAA+GGG | - | chr1.4:72240695-72240714 | MS.gene09986:intron | 35.0% | |
| CTCAAATTTGGACTAACTGA+TGG | - | chr1.4:72236506-72236525 | MS.gene09986:intron | 35.0% | |
| CTTGCACAGTAGGAAATTTA+GGG | - | chr1.4:72234466-72234485 | MS.gene09986:CDS | 35.0% | |
| CTTTGGTACTTAAAGCTTAC+AGG | - | chr1.4:72239528-72239547 | MS.gene09986:intron | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+TGG | + | chr1.4:72234913-72234932 | None:intergenic | 35.0% | |
| GAGTACAAGTACATTGTTGA+TGG | - | chr1.4:72240724-72240743 | MS.gene09986:CDS | 35.0% | |
| GCCGTCGTTAATTATACATT+AGG | - | chr1.4:72237972-72237991 | MS.gene09986:intron | 35.0% | |
| GGTGAACTGAAACTGAAATT+TGG | - | chr1.4:72234663-72234682 | MS.gene09986:intron | 35.0% | |
| GTAATAAAAATCCCTCCCTA+TGG | + | chr1.4:72240951-72240970 | None:intergenic | 35.0% | |
| TAAATGCCATGCAATATCTC+AGG | + | chr1.4:72239369-72239388 | None:intergenic | 35.0% | |
| TAATAACATGACAGAAGCCA+TGG | - | chr1.4:72236093-72236112 | MS.gene09986:CDS | 35.0% | |
| TAGAAAAACAAATCCAGGGA+GGG | + | chr1.4:72240296-72240315 | None:intergenic | 35.0% | |
| TATACTGTGACTTCTAATGC+TGG | - | chr1.4:72239136-72239155 | MS.gene09986:intron | 35.0% | |
| TCAGGGTTATAAACTCAATG+AGG | - | chr1.4:72238407-72238426 | MS.gene09986:intron | 35.0% | |
| TCATATTCAATGTACCAGGA+AGG | - | chr1.4:72240694-72240713 | MS.gene09986:intron | 35.0% | |
| TCTTGCACAGTAGGAAATTT+AGG | - | chr1.4:72234465-72234484 | MS.gene09986:CDS | 35.0% | |
| TGAAACAAAAAGAAACCTGC+AGG | + | chr1.4:72236682-72236701 | None:intergenic | 35.0% | |
| TGAAGTTACCTTAAGTAGCA+TGG | + | chr1.4:72235074-72235093 | None:intergenic | 35.0% | |
| TGATAGAGAATAACGAACCT+GGG | + | chr1.4:72234755-72234774 | None:intergenic | 35.0% | |
| TGCAACTATCAATGCTACAA+CGG | - | chr1.4:72238640-72238659 | MS.gene09986:CDS | 35.0% | |
| TGTGTGGAATTGTAAAACAG+AGG | + | chr1.4:72234845-72234864 | None:intergenic | 35.0% | |
| TTACTAGTTAATGGGGATGA+TGG | + | chr1.4:72239742-72239761 | None:intergenic | 35.0% | |
| TTATCGGGTTTAGATTGACT+AGG | - | chr1.4:72237116-72237135 | MS.gene09986:intron | 35.0% | |
| TTCAGGACTTGATATTGGAT+GGG | - | chr1.4:72239611-72239630 | MS.gene09986:CDS | 35.0% | |
| TTCTACTTCATGTGTTCTCT+GGG | - | chr1.4:72235966-72235985 | MS.gene09986:intron | 35.0% | |
| TTGAATGTCATTGCATGTGT+TGG | + | chr1.4:72237005-72237024 | None:intergenic | 35.0% | |
| TTGACATGGCCATCTTTATT+GGG | + | chr1.4:72240787-72240806 | None:intergenic | 35.0% | |
| TTTCAGGACTTGATATTGGA+TGG | - | chr1.4:72239610-72239629 | MS.gene09986:CDS | 35.0% | |
| ! | AGTACATTGTTGATGGAGAA+TGG | - | chr1.4:72240731-72240750 | MS.gene09986:CDS | 35.0% |
| ! | CAGCTGAGATCATTTAAAAC+AGG | + | chr1.4:72235670-72235689 | None:intergenic | 35.0% |
| ! | GGGTTCTAATTTCTCTTATG+AGG | + | chr1.4:72235916-72235935 | None:intergenic | 35.0% |
| ! | TGATTGACATTTTCTTGTGC+AGG | - | chr1.4:72235994-72236013 | MS.gene09986:intron | 35.0% |
| ! | TTCAAAGAGCATGAGATATG+TGG | + | chr1.4:72241064-72241083 | None:intergenic | 35.0% |
| !! | TTTTGGAAATGTCCACATGT+AGG | - | chr1.4:72239796-72239815 | MS.gene09986:intron | 35.0% |
| !!! | CAGTTTCTTTTGCTATTGGA+GGG | - | chr1.4:72238968-72238987 | MS.gene09986:intron | 35.0% |
| !!! | GCATATATGTTTTGGGTTCA+GGG | - | chr1.4:72238390-72238409 | MS.gene09986:intron | 35.0% |
| !!! | GGTTACAAAGTTTTCTAGCT+AGG | - | chr1.4:72238296-72238315 | MS.gene09986:intron | 35.0% |
| AAAGTGACAGGCTTCTTACT+AGG | + | chr1.4:72239555-72239574 | None:intergenic | 40.0% | |
| AAGAGATTGTCTGCAACATC+TGG | + | chr1.4:72239179-72239198 | None:intergenic | 40.0% | |
| AAGAGGTTACTTGAACGAAC+AGG | + | chr1.4:72235165-72235184 | None:intergenic | 40.0% | |
| AAGTGACAGGCTTCTTACTA+GGG | + | chr1.4:72239554-72239573 | None:intergenic | 40.0% | |
| ACAACACAAGACAGTTACAC+AGG | - | chr1.4:72234642-72234661 | MS.gene09986:intron | 40.0% | |
| AGCAGCAGAGGATACTTTAA+CGG | + | chr1.4:72237921-72237940 | None:intergenic | 40.0% | |
| AGGCCATGATTCCTATTCAA+AGG | + | chr1.4:72239349-72239368 | None:intergenic | 40.0% | |
| AGTATGTCTATTGAGGTTCG+TGG | - | chr1.4:72238488-72238507 | MS.gene09986:intron | 40.0% | |
| ATAGAGTTCCACGAGTTAGT+TGG | - | chr1.4:72238224-72238243 | MS.gene09986:intron | 40.0% | |
| ATCTACTAAAGCCTCACCAT+AGG | - | chr1.4:72240932-72240951 | MS.gene09986:CDS | 40.0% | |
| ATTAAACATACCAGCACCCA+TGG | + | chr1.4:72236113-72236132 | None:intergenic | 40.0% | |
| CAGTTCTGTCACATATAGTC+TGG | - | chr1.4:72236722-72236741 | MS.gene09986:intron | 40.0% | |
| CATGATCCAACAATCAAGTC+CGG | + | chr1.4:72236659-72236678 | None:intergenic | 40.0% | |
| CATTATATCGTGGATGTTGC+AGG | - | chr1.4:72237424-72237443 | MS.gene09986:intron | 40.0% | |
| CCTACGCAATAGATGATTCT+AGG | + | chr1.4:72239256-72239275 | None:intergenic | 40.0% | |
| CCTAGAATCATCTATTGCGT+AGG | - | chr1.4:72239253-72239272 | MS.gene09986:intron | 40.0% | |
| CCTCCAATAGCAAAAGAAAC+TGG | + | chr1.4:72238970-72238989 | None:intergenic | 40.0% | |
| CTTCTACTTCATGTGTTCTC+TGG | - | chr1.4:72235965-72235984 | MS.gene09986:intron | 40.0% | |
| GAAAAACAAAGGCCTACATG+TGG | + | chr1.4:72239811-72239830 | None:intergenic | 40.0% | |
| GAACTACAACTTCATCCTTC+CGG | - | chr1.4:72236637-72236656 | MS.gene09986:intron | 40.0% | |
| GTAACCTCTCCCAATAAAGA+TGG | - | chr1.4:72240775-72240794 | MS.gene09986:CDS | 40.0% | |
| GTAACTGTCTTGTGTTGTGT+GGG | + | chr1.4:72234640-72234659 | None:intergenic | 40.0% | |
| GTGGAATTGTAAAACAGAGG+AGG | + | chr1.4:72234842-72234861 | None:intergenic | 40.0% | |
| GTTACCTTAAGTAGCATGGT+TGG | + | chr1.4:72235070-72235089 | None:intergenic | 40.0% | |
| GTTGACATGGCCATCTTTAT+TGG | + | chr1.4:72240788-72240807 | None:intergenic | 40.0% | |
| TAACAGACACAAACTCCAGA+TGG | + | chr1.4:72240990-72241009 | None:intergenic | 40.0% | |
| TAACTGTCTTGTGTTGTGTG+GGG | + | chr1.4:72234639-72234658 | None:intergenic | 40.0% | |
| TAGAGTTCCACGAGTTAGTT+GGG | - | chr1.4:72238225-72238244 | MS.gene09986:intron | 40.0% | |
| TCAGGACTTGATATTGGATG+GGG | - | chr1.4:72239612-72239631 | MS.gene09986:CDS | 40.0% | |
| TCGGATCCTTCAATACACAT+AGG | + | chr1.4:72235643-72235662 | None:intergenic | 40.0% | |
| TCTACTAAAGCCTCACCATA+GGG | - | chr1.4:72240933-72240952 | MS.gene09986:CDS | 40.0% | |
| TCTACTTCATGTGTTCTCTG+GGG | - | chr1.4:72235967-72235986 | MS.gene09986:intron | 40.0% | |
| TGAGGCTAATACACTACTTC+TGG | - | chr1.4:72238425-72238444 | MS.gene09986:intron | 40.0% | |
| TGCATGACATACAATGGCAT+CGG | + | chr1.4:72237396-72237415 | None:intergenic | 40.0% | |
| TGCTGAGATAAGGTTCGTAA+TGG | - | chr1.4:72237033-72237052 | MS.gene09986:intron | 40.0% | |
| TGTAACTGTCTTGTGTTGTG+TGG | + | chr1.4:72234641-72234660 | None:intergenic | 40.0% | |
| TGTAATGCTGGACATACACA+GGG | - | chr1.4:72235019-72235038 | MS.gene09986:intron | 40.0% | |
| TGTGACAGAACTGAATCATC+AGG | + | chr1.4:72236715-72236734 | None:intergenic | 40.0% | |
| TTCAGAATCTGAATCTTCCC+AGG | - | chr1.4:72234735-72234754 | MS.gene09986:intron | 40.0% | |
| TTCTTCTTCTTCTCTATCCC+TGG | - | chr1.4:72234921-72234940 | MS.gene09986:CDS | 40.0% | |
| TTGTAATGCTGGACATACAC+AGG | - | chr1.4:72235018-72235037 | MS.gene09986:intron | 40.0% | |
| ! | ATGTTTTCGGTGATCTCTCA+TGG | - | chr1.4:72237727-72237746 | MS.gene09986:intron | 40.0% |
| ! | CATTCCAACCATGCTACTTA+AGG | - | chr1.4:72235063-72235082 | MS.gene09986:intron | 40.0% |
| ! | CTCACAGCTTATGGGTTTTT+GGG | - | chr1.4:72237203-72237222 | MS.gene09986:intron | 40.0% |
| ! | CTTTTTATGGCATCCAGCTT+TGG | + | chr1.4:72239062-72239081 | None:intergenic | 40.0% |
| ! | GGACTGATGCTGAATGTTTT+CGG | - | chr1.4:72237714-72237733 | MS.gene09986:intron | 40.0% |
| ! | GGAGATTTAGAGCTTGTTTC+TGG | - | chr1.4:72238047-72238066 | MS.gene09986:intron | 40.0% |
| ! | TCTCACAGCTTATGGGTTTT+TGG | - | chr1.4:72237202-72237221 | MS.gene09986:intron | 40.0% |
| ! | TGACTGAAGTTTTACCCATC+CGG | + | chr1.4:72237281-72237300 | None:intergenic | 40.0% |
| ! | TGTGTTGGCATATTCTCGTA+TGG | + | chr1.4:72236990-72237009 | None:intergenic | 40.0% |
| !! | ATCGGCTGTTGCACTTTTTA+TGG | + | chr1.4:72239075-72239094 | None:intergenic | 40.0% |
| !! | CATTTTGGTGTATGCTAGAG+AGG | - | chr1.4:72235848-72235867 | MS.gene09986:intron | 40.0% |
| !! | CTTGTTTCTGGATCTTGTGT+TGG | - | chr1.4:72238059-72238078 | MS.gene09986:intron | 40.0% |
| !! | TGGCCAGTTTCTTTTGCTAT+TGG | - | chr1.4:72238964-72238983 | MS.gene09986:intron | 40.0% |
| !! | TTAAGGGCACTCTCTGAAAA+GGG | + | chr1.4:72240006-72240025 | None:intergenic | 40.0% |
| !! | TTTAAGGGCACTCTCTGAAA+AGG | + | chr1.4:72240007-72240026 | None:intergenic | 40.0% |
| !!! | CCAGTTTCTTTTGCTATTGG+AGG | - | chr1.4:72238967-72238986 | MS.gene09986:intron | 40.0% |
| !!! | GGCATATATGTTTTGGGTTC+AGG | - | chr1.4:72238389-72238408 | MS.gene09986:intron | 40.0% |
| !!! | GTAGGCCTTTGTTTTTCTGT+TGG | - | chr1.4:72239814-72239833 | MS.gene09986:intron | 40.0% |
| AAAAATCCCTCCCTATGGTG+AGG | + | chr1.4:72240946-72240965 | None:intergenic | 45.0% | |
| AACAAATCCAGGGAGGGAAA+AGG | + | chr1.4:72240290-72240309 | None:intergenic | 45.0% | |
| AACACTTGCGTGCTGAGATA+AGG | - | chr1.4:72237023-72237042 | MS.gene09986:intron | 45.0% | |
| AACTGTTAGACAGTGGCCAA+TGG | + | chr1.4:72238354-72238373 | None:intergenic | 45.0% | |
| ATACATTGCACTGCTGGACT+TGG | - | chr1.4:72237537-72237556 | MS.gene09986:intron | 45.0% | |
| ATCCAACAATCAAGTCCGGA+AGG | + | chr1.4:72236655-72236674 | None:intergenic | 45.0% | |
| ATCCTTCCGGACTTGATTGT+TGG | - | chr1.4:72236650-72236669 | MS.gene09986:intron | 45.0% | |
| ATGGCCATCTTTATTGGGAG+AGG | + | chr1.4:72240782-72240801 | None:intergenic | 45.0% | |
| ATTCCCGCTACACTGAAACA+CGG | + | chr1.4:72237944-72237963 | None:intergenic | 45.0% | |
| CAGGACTTGATATTGGATGG+GGG | - | chr1.4:72239613-72239632 | MS.gene09986:CDS | 45.0% | |
| CGCAGTTTATCAACGTCTTC+AGG | + | chr1.4:72236788-72236807 | None:intergenic | 45.0% | |
| GAATCAGCACTAAGCAGCAA+TGG | + | chr1.4:72234797-72234816 | None:intergenic | 45.0% | |
| GGGTTCATGGTTTCTCAAGA+AGG | - | chr1.4:72240042-72240061 | MS.gene09986:intron | 45.0% | |
| TATCAACGTCTTCAGGAGTC+TGG | + | chr1.4:72236781-72236800 | None:intergenic | 45.0% | |
| TCATGGCCTGAGATATTGCA+TGG | - | chr1.4:72239360-72239379 | MS.gene09986:intron | 45.0% | |
| TCGATGACAAACAGGGTTCA+TGG | - | chr1.4:72240029-72240048 | MS.gene09986:intron | 45.0% | |
| TGATGATCCTGATCTCACGA+AGG | - | chr1.4:72241140-72241159 | MS.gene09986:intron | 45.0% | |
| TGCTCTACGGTGGAAATTTC+AGG | - | chr1.4:72239594-72239613 | MS.gene09986:CDS | 45.0% | |
| TTTCCACCGTAGAGCAATTG+CGG | + | chr1.4:72239590-72239609 | None:intergenic | 45.0% | |
| ! | CTGATTTCGTAGTACCGGAT+GGG | - | chr1.4:72237264-72237283 | MS.gene09986:CDS | 45.0% |
| ! | TCTGATTTCGTAGTACCGGA+TGG | - | chr1.4:72237263-72237282 | MS.gene09986:CDS | 45.0% |
| !! | TGAACAGGTCCTTGATGATG+CGG | - | chr1.4:72241080-72241099 | MS.gene09986:intron | 45.0% |
| !! | AAAAAAAATTACTAATAAAA+AGG | - | chr1.4:72234568-72234587 | MS.gene09986:CDS | 5.0% |
| !! | TTATATATAAATAATATGTT+TGG | - | chr1.4:72235190-72235209 | MS.gene09986:intron | 5.0% |
| AACTTTGTAACCACGACGCG+TGG | + | chr1.4:72238288-72238307 | None:intergenic | 50.0% | |
| AAGAGACATACCGCAACAGC+TGG | + | chr1.4:72237570-72237589 | None:intergenic | 50.0% | |
| AAGGTCATGCTGTCCAAAGC+TGG | - | chr1.4:72239046-72239065 | MS.gene09986:CDS | 50.0% | |
| AATCCGACCCAACTAACTCG+TGG | + | chr1.4:72238235-72238254 | None:intergenic | 50.0% | |
| ACACAATAGCAGTGGAGAGG+AGG | - | chr1.4:72237882-72237901 | MS.gene09986:intron | 50.0% | |
| ACTAAAGCCTCACCATAGGG+AGG | - | chr1.4:72240936-72240955 | MS.gene09986:CDS | 50.0% | |
| ACTTGATATTGGATGGGGGC+AGG | - | chr1.4:72239617-72239636 | MS.gene09986:CDS | 50.0% | |
| AGCACACAATAGCAGTGGAG+AGG | - | chr1.4:72237879-72237898 | MS.gene09986:intron | 50.0% | |
| AGCTGTTGCGGTATGTCTCT+TGG | - | chr1.4:72237569-72237588 | MS.gene09986:intron | 50.0% | |
| CACAATAGCAGTGGAGAGGA+GGG | - | chr1.4:72237883-72237902 | MS.gene09986:intron | 50.0% | |
| CGGTGATCTCTCATGGTGAA+TGG | - | chr1.4:72237734-72237753 | MS.gene09986:intron | 50.0% | |
| CGTTCATCCTTCGTGAGATC+AGG | + | chr1.4:72241150-72241169 | None:intergenic | 50.0% | |
| CTAAAGCCTCACCATAGGGA+GGG | - | chr1.4:72240937-72240956 | MS.gene09986:CDS | 50.0% | |
| GAGCTACTTGTCTCTGCACT+CGG | + | chr1.4:72236037-72236056 | None:intergenic | 50.0% | |
| GATTGTTGGATCATGCCTGC+AGG | - | chr1.4:72236664-72236683 | MS.gene09986:intron | 50.0% | |
| GTTCCACGAGTTAGTTGGGT+CGG | - | chr1.4:72238229-72238248 | MS.gene09986:intron | 50.0% | |
| TCTGGAAGCTCTTCCCAATG+AGG | - | chr1.4:72241188-72241207 | MS.gene09986:intron | 50.0% | |
| TGATCTACGAAAGCGGCTTC+CGG | - | chr1.4:72237461-72237480 | MS.gene09986:intron | 50.0% | |
| TGCTCCGTGTTTCAGTGTAG+CGG | - | chr1.4:72237937-72237956 | MS.gene09986:intron | 50.0% | |
| TTTCTTGTGCAGGCTGCTTC+TGG | - | chr1.4:72236004-72236023 | MS.gene09986:intron | 50.0% | |
| ! | AAGATATTGTGGTGGCGAGC+AGG | + | chr1.4:72234886-72234905 | None:intergenic | 50.0% |
| !! | AAGCCTGTCACTTTGTCGTG+GGG | - | chr1.4:72239561-72239580 | MS.gene09986:CDS | 50.0% |
| !! | AAGTAGCTCTGATGTCGAGG+AGG | - | chr1.4:72236048-72236067 | MS.gene09986:CDS | 50.0% |
| !! | AGAAGCCTGTCACTTTGTCG+TGG | - | chr1.4:72239559-72239578 | MS.gene09986:CDS | 50.0% |
| !! | GAAGCCTGTCACTTTGTCGT+GGG | - | chr1.4:72239560-72239579 | MS.gene09986:CDS | 50.0% |
| !! | GACAAGTAGCTCTGATGTCG+AGG | - | chr1.4:72236045-72236064 | MS.gene09986:CDS | 50.0% |
| ACACCGCAATTGCTCTACGG+TGG | - | chr1.4:72239584-72239603 | MS.gene09986:CDS | 55.0% | |
| ACCAGTCACTCTCTCCCGAA+GGG | + | chr1.4:72241121-72241140 | None:intergenic | 55.0% | |
| ACTGAAACACGGAGCAGCAG+AGG | + | chr1.4:72237933-72237952 | None:intergenic | 55.0% | |
| ATGACAGAAGCCATGGGTGC+TGG | - | chr1.4:72236100-72236119 | MS.gene09986:CDS | 55.0% | |
| CAACGTCTTCAGGAGTCTGG+TGG | + | chr1.4:72236778-72236797 | None:intergenic | 55.0% | |
| GAGGAGGAGCAGATAGTGTG+TGG | + | chr1.4:72234861-72234880 | None:intergenic | 55.0% | |
| GCTCCGTGTTTCAGTGTAGC+GGG | - | chr1.4:72237938-72237957 | MS.gene09986:intron | 55.0% | |
| GGGACACCGCAATTGCTCTA+CGG | - | chr1.4:72239581-72239600 | MS.gene09986:CDS | 55.0% | |
| TCTTGTGTTGTGTGGGGCAG+CGG | + | chr1.4:72234633-72234652 | None:intergenic | 55.0% | |
| TGGAAGAGCTCCAGCTGTTG+CGG | - | chr1.4:72237557-72237576 | MS.gene09986:intron | 55.0% | |
| TGTCCCCACGACAAAGTGAC+AGG | + | chr1.4:72239567-72239586 | None:intergenic | 55.0% | |
| ! | TTCGCTTCCTTTTCCCTCCC+TGG | - | chr1.4:72240280-72240299 | MS.gene09986:intron | 55.0% |
| !! | GTCCTTGATGATGCGGACAG+TGG | - | chr1.4:72241087-72241106 | MS.gene09986:intron | 55.0% |
| !! | TAGCTCTGATGTCGAGGAGG+AGG | - | chr1.4:72236051-72236070 | MS.gene09986:CDS | 55.0% |
| AGTCACTCTCTCCCGAAGGG+AGG | + | chr1.4:72241118-72241137 | None:intergenic | 60.0% | |
| CACCAGTCACTCTCTCCCGA+AGG | + | chr1.4:72241122-72241141 | None:intergenic | 60.0% | |
| GGCCACTGTCCGCATCATCA+AGG | + | chr1.4:72241092-72241111 | None:intergenic | 60.0% | |
| TCCCTTCGGGAGAGAGTGAC+TGG | - | chr1.4:72241117-72241136 | MS.gene09986:intron | 60.0% | |
| TGTACTCGTAGCGCCCTTCC+TGG | + | chr1.4:72240711-72240730 | None:intergenic | 60.0% | |
| ! | TTGTGGTGGCGAGCAGGAAG+AGG | + | chr1.4:72234880-72234899 | None:intergenic | 60.0% |
| ACAGTGGCCGTGCCTCCCTT+CGG | - | chr1.4:72241103-72241122 | MS.gene09986:intron | 65.0% | |
| CAGTGGAGAGGAGGGAGCTG+AGG | - | chr1.4:72237891-72237910 | MS.gene09986:intron | 65.0% | |
| CTCTCTCCCGAAGGGAGGCA+CGG | + | chr1.4:72241113-72241132 | None:intergenic | 65.0% | |
| GGAGAGGAGGGAGCTGAGGA+TGG | - | chr1.4:72237895-72237914 | MS.gene09986:intron | 65.0% | |
| TGTGTGGGGCAGCGGTCACA+AGG | + | chr1.4:72234625-72234644 | None:intergenic | 65.0% | |
| ! | TGGTGGCGAGCAGGAAGAGG+AGG | + | chr1.4:72234877-72234896 | None:intergenic | 65.0% |
| CAGTGGCCGTGCCTCCCTTC+GGG | - | chr1.4:72241104-72241123 | MS.gene09986:intron | 70.0% | |
| CGCACGCATACCACGCGTCG+TGG | - | chr1.4:72238275-72238294 | MS.gene09986:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 72234462 | 72241218 | 72234462 | ID=MS.gene09986 |
| chr1.4 | mRNA | 72234462 | 72241218 | 72234462 | ID=MS.gene09986.t1;Parent=MS.gene09986 |
| chr1.4 | exon | 72241207 | 72241218 | 72241207 | ID=MS.gene09986.t1.exon1;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72241207 | 72241218 | 72241207 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72240924 | 72240986 | 72240924 | ID=MS.gene09986.t1.exon2;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72240924 | 72240986 | 72240924 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72240721 | 72240843 | 72240721 | ID=MS.gene09986.t1.exon3;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72240721 | 72240843 | 72240721 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72240596 | 72240640 | 72240596 | ID=MS.gene09986.t1.exon4;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72240596 | 72240640 | 72240596 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72239559 | 72239664 | 72239559 | ID=MS.gene09986.t1.exon5;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72239559 | 72239664 | 72239559 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72238995 | 72239071 | 72238995 | ID=MS.gene09986.t1.exon6;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72238995 | 72239071 | 72238995 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72238822 | 72238898 | 72238822 | ID=MS.gene09986.t1.exon7;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72238822 | 72238898 | 72238822 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72238636 | 72238716 | 72238636 | ID=MS.gene09986.t1.exon8;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72238636 | 72238716 | 72238636 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72238102 | 72238234 | 72238102 | ID=MS.gene09986.t1.exon9;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72238102 | 72238234 | 72238102 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72237234 | 72237293 | 72237234 | ID=MS.gene09986.t1.exon10;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72237234 | 72237293 | 72237234 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72236583 | 72236639 | 72236583 | ID=MS.gene09986.t1.exon11;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72236583 | 72236639 | 72236583 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72236042 | 72236137 | 72236042 | ID=MS.gene09986.t1.exon12;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72236042 | 72236137 | 72236042 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72235608 | 72235667 | 72235608 | ID=MS.gene09986.t1.exon13;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72235608 | 72235667 | 72235608 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72234861 | 72234968 | 72234861 | ID=MS.gene09986.t1.exon14;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72234861 | 72234968 | 72234861 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| chr1.4 | exon | 72234462 | 72234593 | 72234462 | ID=MS.gene09986.t1.exon15;Parent=MS.gene09986.t1 |
| chr1.4 | CDS | 72234462 | 72234593 | 72234462 | ID=cds.MS.gene09986.t1;Parent=MS.gene09986.t1 |
| Gene Sequence |
| Protein sequence |
