Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20006.t1 | XP_013469353.1 | 99.4 | 526 | 3 | 0 | 1 | 526 | 1 | 526 | 3.20E-296 | 1026.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20006.t1 | B8BJ39 | 84.1 | 527 | 83 | 1 | 1 | 526 | 1 | 527 | 2.4e-255 | 882.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20006.t1 | A0A072VP40 | 99.4 | 526 | 3 | 0 | 1 | 526 | 1 | 526 | 2.3e-296 | 1026.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050225 | MS.gene20006 | 0.983949 | 3.67E-159 | -1.69E-46 |
| MS.gene053108 | MS.gene20006 | 0.827059 | 1.93E-54 | -1.69E-46 |
| MS.gene056618 | MS.gene20006 | 0.844427 | 7.61E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20006.t1 | MTR_1g091040 | 99.430 | 526 | 3 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1080 |
| MS.gene20006.t1 | MTR_7g103420 | 81.594 | 527 | 96 | 1 | 1 | 526 | 1 | 527 | 0.0 | 920 |
| MS.gene20006.t1 | MTR_1g061630 | 82.042 | 529 | 92 | 2 | 1 | 526 | 1 | 529 | 0.0 | 914 |
| MS.gene20006.t1 | MTR_7g103420 | 79.336 | 542 | 96 | 2 | 1 | 526 | 1 | 542 | 0.0 | 911 |
| MS.gene20006.t1 | MTR_1g061630 | 80.718 | 529 | 83 | 3 | 1 | 526 | 1 | 513 | 0.0 | 889 |
| MS.gene20006.t1 | MTR_7g103420 | 81.963 | 438 | 78 | 1 | 90 | 526 | 1 | 438 | 0.0 | 769 |
| MS.gene20006.t1 | MTR_1g091040 | 98.619 | 362 | 5 | 0 | 165 | 526 | 32 | 393 | 0.0 | 742 |
| MS.gene20006.t1 | MTR_6g004020 | 43.030 | 495 | 269 | 7 | 30 | 521 | 22 | 506 | 7.53e-132 | 393 |
| MS.gene20006.t1 | MTR_7g100760 | 41.942 | 515 | 281 | 9 | 14 | 525 | 1 | 500 | 7.41e-129 | 385 |
| MS.gene20006.t1 | MTR_4g083340 | 41.683 | 499 | 278 | 7 | 30 | 525 | 9 | 497 | 8.29e-128 | 382 |
| MS.gene20006.t1 | MTR_4g083330 | 40.856 | 514 | 261 | 9 | 14 | 525 | 1 | 473 | 8.58e-118 | 356 |
| MS.gene20006.t1 | MTR_5g014140 | 30.000 | 410 | 255 | 12 | 30 | 430 | 79 | 465 | 3.74e-47 | 172 |
| MS.gene20006.t1 | MTR_1g105965 | 26.761 | 497 | 319 | 12 | 30 | 513 | 92 | 556 | 3.41e-46 | 170 |
| MS.gene20006.t1 | MTR_6g034195 | 28.081 | 495 | 313 | 15 | 21 | 511 | 99 | 554 | 1.19e-45 | 169 |
| MS.gene20006.t1 | MTR_1g076540 | 26.547 | 501 | 310 | 12 | 30 | 508 | 91 | 555 | 1.61e-44 | 166 |
| MS.gene20006.t1 | MTR_1g099360 | 27.572 | 486 | 310 | 15 | 30 | 511 | 105 | 552 | 1.59e-43 | 163 |
| MS.gene20006.t1 | MTR_5g014140 | 31.325 | 332 | 208 | 10 | 30 | 355 | 79 | 396 | 6.81e-40 | 150 |
| MS.gene20006.t1 | MTR_1g105965 | 27.760 | 317 | 209 | 8 | 30 | 337 | 92 | 397 | 1.15e-32 | 129 |
| MS.gene20006.t1 | MTR_1g105965 | 25.339 | 221 | 147 | 6 | 30 | 242 | 92 | 302 | 6.67e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20006.t1 | AT3G52990 | 81.594 | 527 | 96 | 1 | 1 | 526 | 1 | 527 | 0.0 | 913 |
| MS.gene20006.t1 | AT2G36580 | 80.645 | 527 | 101 | 1 | 1 | 526 | 1 | 527 | 0.0 | 898 |
| MS.gene20006.t1 | AT3G52990 | 82.278 | 474 | 83 | 1 | 54 | 526 | 1 | 474 | 0.0 | 832 |
| MS.gene20006.t1 | AT5G63680 | 43.030 | 495 | 269 | 7 | 30 | 521 | 22 | 506 | 5.62e-128 | 383 |
| MS.gene20006.t1 | AT5G63680 | 43.030 | 495 | 269 | 7 | 30 | 521 | 22 | 506 | 5.62e-128 | 383 |
| MS.gene20006.t1 | AT5G63680 | 43.030 | 495 | 269 | 7 | 30 | 521 | 22 | 506 | 5.62e-128 | 383 |
| MS.gene20006.t1 | AT5G08570 | 43.232 | 495 | 268 | 9 | 30 | 521 | 22 | 506 | 4.88e-127 | 381 |
| MS.gene20006.t1 | AT5G08570 | 43.232 | 495 | 268 | 9 | 30 | 521 | 22 | 506 | 4.88e-127 | 381 |
| MS.gene20006.t1 | AT5G08570 | 43.232 | 495 | 268 | 9 | 30 | 521 | 22 | 506 | 4.88e-127 | 381 |
| MS.gene20006.t1 | AT5G56350 | 42.742 | 496 | 271 | 8 | 30 | 522 | 10 | 495 | 1.43e-126 | 379 |
| MS.gene20006.t1 | AT4G26390 | 41.129 | 496 | 279 | 7 | 30 | 522 | 9 | 494 | 6.28e-122 | 367 |
| MS.gene20006.t1 | AT3G04050 | 40.637 | 502 | 283 | 8 | 30 | 525 | 18 | 510 | 6.39e-120 | 362 |
| MS.gene20006.t1 | AT3G55650 | 41.036 | 502 | 281 | 7 | 30 | 525 | 18 | 510 | 2.87e-117 | 355 |
| MS.gene20006.t1 | AT3G25960 | 40.882 | 499 | 273 | 8 | 30 | 525 | 18 | 497 | 9.17e-116 | 351 |
| MS.gene20006.t1 | AT3G55810 | 38.247 | 502 | 277 | 8 | 30 | 525 | 18 | 492 | 3.32e-103 | 319 |
| MS.gene20006.t1 | AT1G32440 | 30.569 | 422 | 266 | 11 | 30 | 448 | 101 | 498 | 2.53e-48 | 176 |
| MS.gene20006.t1 | AT5G52920 | 29.227 | 414 | 272 | 12 | 21 | 431 | 104 | 499 | 5.36e-43 | 161 |
| MS.gene20006.t1 | AT3G22960 | 25.852 | 499 | 314 | 13 | 30 | 508 | 119 | 581 | 2.25e-40 | 154 |
Find 126 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGACATTGGAAAATTTA+AGG | 0.150763 | 1.4:-72513519 | MS.gene20006:CDS |
| CATTGTCTCTCGTGGAAATT+TGG | 0.157630 | 1.4:-72511460 | MS.gene20006:CDS |
| CTGCTTGAGGTCTTCAAATT+TGG | 0.167564 | 1.4:+72511697 | None:intergenic |
| GACATTCACCGGTGCATTTC+AGG | 0.196130 | 1.4:-72509994 | MS.gene20006:CDS |
| CTGACGAGTCACCAACTTTC+TGG | 0.209286 | 1.4:+72509637 | None:intergenic |
| CTTGGGGCAGAGACCCTTAC+TGG | 0.238060 | 1.4:-72510864 | MS.gene20006:CDS |
| AATGTCTCTTGGTGGTATTC+TGG | 0.238537 | 1.4:+72513532 | None:intergenic |
| ATCGGTAAATATCTGTTTAC+AGG | 0.257297 | 1.4:-72512990 | MS.gene20006:CDS |
| GAAAGGCCGCTAAAATTTAC+TGG | 0.264525 | 1.4:+72513167 | None:intergenic |
| TGCTTCTTGAGGAACCTATT+AGG | 0.292663 | 1.4:-72515044 | MS.gene20006:CDS |
| TTAGACCATGGCAAGGCTTT+TGG | 0.295423 | 1.4:-72509693 | MS.gene20006:CDS |
| TTATTCACGACTTGTAATTC+TGG | 0.303358 | 1.4:+72513275 | None:intergenic |
| GTAGCTTCTTTGTTCTGATC+TGG | 0.328901 | 1.4:+72513203 | None:intergenic |
| ATTGTCTCTCGTGGAAATTT+GGG | 0.332252 | 1.4:-72511459 | MS.gene20006:CDS |
| GTGTCTGCTTCAAGGGTAAT+TGG | 0.332260 | 1.4:+72513242 | None:intergenic |
| AGAGACATTGGAAAATTTAA+GGG | 0.372740 | 1.4:-72513518 | MS.gene20006:CDS |
| AGGATGGAAGCCATCCTAAT+AGG | 0.392259 | 1.4:+72515030 | None:intergenic |
| ATCATCTGCTTCACCTCATC+TGG | 0.394382 | 1.4:-72510313 | MS.gene20006:CDS |
| GTGCAGGCCGAATCGAATAC+TGG | 0.397044 | 1.4:-72509744 | MS.gene20006:intron |
| ACCACACGTGTGACAACAAC+GGG | 0.403478 | 1.4:+72511188 | None:intergenic |
| GAAGGAGATACTGACAGGTT+TGG | 0.405452 | 1.4:+72514999 | None:intergenic |
| TCGAGCAGCCGTCAAGGTTA+AGG | 0.409040 | 1.4:-72510344 | MS.gene20006:CDS |
| ATTGATTCCATGTGGCTCAT+AGG | 0.420729 | 1.4:+72510484 | None:intergenic |
| AAGTAGATACCGACCTTCTC+AGG | 0.423206 | 1.4:+72511423 | None:intergenic |
| GCAGTGATGCAATTCTCCTT+GGG | 0.424846 | 1.4:-72510881 | MS.gene20006:CDS |
| GTCCAGCCCTTTGCTTCTTG+AGG | 0.431172 | 1.4:-72515055 | MS.gene20006:CDS |
| TTGCACGGTTTGACTTCTCA+TGG | 0.446494 | 1.4:-72513561 | MS.gene20006:CDS |
| CAAGTGATGTGTCTGCTTCA+AGG | 0.449834 | 1.4:+72513234 | None:intergenic |
| GGCAGTGATGCAATTCTCCT+TGG | 0.450255 | 1.4:-72510882 | MS.gene20006:CDS |
| ACTGTAGAAATGGTTTCTAC+AGG | 0.450667 | 1.4:+72510834 | None:intergenic |
| AGTTGATTTGTCTTCAATTG+AGG | 0.452233 | 1.4:+72510023 | None:intergenic |
| TGCCTTGATGCAGGAATGTC+TGG | 0.452622 | 1.4:-72514097 | MS.gene20006:intron |
| TAAGAAGACTGTCAAATATG+TGG | 0.458797 | 1.4:-72510512 | MS.gene20006:CDS |
| GGCGAACATCTTCAGCGTGC+CGG | 0.459359 | 1.4:+72511915 | None:intergenic |
| AATAGTATCACCCTTCTTCA+CGG | 0.459621 | 1.4:+72513016 | None:intergenic |
| ATCAAATGAATCAATCTTGA+AGG | 0.460016 | 1.4:-72509721 | MS.gene20006:CDS |
| GATTATGCAGGCCGTGAAGA+AGG | 0.462451 | 1.4:-72513027 | MS.gene20006:intron |
| CGATGTTGCCAATGCAGTAT+TGG | 0.462920 | 1.4:-72511120 | MS.gene20006:CDS |
| GCGAACATCTTCAGCGTGCC+GGG | 0.463044 | 1.4:+72511916 | None:intergenic |
| GTAGAAACCATTTCTACAGT+TGG | 0.470386 | 1.4:-72510831 | MS.gene20006:CDS |
| TCTTCCTACTCTTACTGATA+AGG | 0.470694 | 1.4:-72512394 | MS.gene20006:CDS |
| TGTCTGCTTCAAGGGTAATT+GGG | 0.470997 | 1.4:+72513243 | None:intergenic |
| TGCACGGTTTGACTTCTCAT+GGG | 0.475448 | 1.4:-72513560 | MS.gene20006:CDS |
| ATTTGATCCAGTATTCGATT+CGG | 0.478935 | 1.4:+72509737 | None:intergenic |
| AACAGAAGCCTTAACCTTGA+CGG | 0.484642 | 1.4:+72510336 | None:intergenic |
| AAATTTGGAGATATATTCAC+GGG | 0.502345 | 1.4:+72511712 | None:intergenic |
| AAGTGATGTGTCTGCTTCAA+GGG | 0.505911 | 1.4:+72513235 | None:intergenic |
| TCACCGGTGCATTTCAGGCT+CGG | 0.507269 | 1.4:-72509989 | MS.gene20006:CDS |
| TGTCGAGGATCCGCCAGCAT+AGG | 0.508898 | 1.4:+72509939 | None:intergenic |
| GAAGTGAAACAACTTCTGTA+TGG | 0.510806 | 1.4:-72512968 | MS.gene20006:CDS |
| ACATTCCTGCATCAAGGCAT+CGG | 0.512212 | 1.4:+72514101 | None:intergenic |
| TTCCTCAAGAAGCAAAGGGC+TGG | 0.521311 | 1.4:+72515053 | None:intergenic |
| GTCGAGGATCCGCCAGCATA+GGG | 0.522821 | 1.4:+72509940 | None:intergenic |
| CATTCCTGCATCAAGGCATC+GGG | 0.523891 | 1.4:+72514102 | None:intergenic |
| ATTACCCGATGCCTTGATGC+AGG | 0.526566 | 1.4:-72514106 | MS.gene20006:CDS |
| TCTTACTGATAAGGATAAAG+AGG | 0.526803 | 1.4:-72512385 | MS.gene20006:intron |
| AAGAAGACTGTCAAATATGT+GGG | 0.528997 | 1.4:-72510511 | MS.gene20006:CDS |
| CTACAGGGTATAATCCAGTA+AGG | 0.529033 | 1.4:+72510850 | None:intergenic |
| CTGCTTCACCTCATCTGGAA+GGG | 0.535094 | 1.4:-72510308 | MS.gene20006:CDS |
| ATTTATAAGTGTAACATGGC+GGG | 0.535820 | 1.4:-72511215 | MS.gene20006:CDS |
| CAAATTTGGAGATATATTCA+CGG | 0.536091 | 1.4:+72511711 | None:intergenic |
| TAGGTTCCTCAAGAAGCAAA+GGG | 0.537810 | 1.4:+72515049 | None:intergenic |
| CCTCATCTGGAAGGGCTGCA+AGG | 0.541301 | 1.4:-72510300 | MS.gene20006:intron |
| ATTACCATCCAATACTGCAT+TGG | 0.545679 | 1.4:+72511112 | None:intergenic |
| TGACAGGTTTGGATGGCTCT+AGG | 0.546806 | 1.4:+72515010 | None:intergenic |
| TCTTGAGGAACCTATTAGGA+TGG | 0.548539 | 1.4:-72515040 | MS.gene20006:CDS |
| ATAGGTTCCTCAAGAAGCAA+AGG | 0.550497 | 1.4:+72515048 | None:intergenic |
| AGAATACCACCAAGAGACAT+TGG | 0.551827 | 1.4:-72513530 | MS.gene20006:CDS |
| TACCAGACATTCCTGCATCA+AGG | 0.552457 | 1.4:+72514095 | None:intergenic |
| AGGTTTGGATGGCTCTAGGA+TGG | 0.555270 | 1.4:+72515014 | None:intergenic |
| TTGAAGGTTGCTTTAGACCA+TGG | 0.555702 | 1.4:-72509705 | MS.gene20006:CDS |
| TGCAAAGATCGAAAATGTAG+AGG | 0.564673 | 1.4:-72511663 | MS.gene20006:intron |
| ATCATTCTTACAGGGTGTCG+AGG | 0.564881 | 1.4:+72509924 | None:intergenic |
| TCTGCTTCACCTCATCTGGA+AGG | 0.565181 | 1.4:-72510309 | MS.gene20006:CDS |
| ACAGATATCACAGGCATGGT+TGG | 0.565703 | 1.4:+72510053 | None:intergenic |
| GAGATACTGACAGGTTTGGA+TGG | 0.565861 | 1.4:+72515003 | None:intergenic |
| CTGTAGAAATGGTTTCTACA+GGG | 0.567154 | 1.4:+72510835 | None:intergenic |
| ATTATGCAGGCCGTGAAGAA+GGG | 0.567518 | 1.4:-72513026 | MS.gene20006:intron |
| ATACAGGTCAGCGAGGTGAA+TGG | 0.567535 | 1.4:-72512501 | MS.gene20006:intron |
| GATGGTATCATTGTCTCTCG+TGG | 0.568066 | 1.4:-72511468 | MS.gene20006:CDS |
| AACTTAGGTAATACGCACAT+GGG | 0.571273 | 1.4:-72511975 | MS.gene20006:intron |
| CAACTCCGATGGACATTCAC+CGG | 0.575309 | 1.4:-72510005 | MS.gene20006:CDS |
| GTTGTTGTTTGCCAGAAAGT+TGG | 0.576382 | 1.4:-72509648 | MS.gene20006:CDS |
| GATAGATCTCCCACCTGAGA+AGG | 0.576840 | 1.4:-72511436 | MS.gene20006:intron |
| TGAAGACAAATCAACTCCGA+TGG | 0.584693 | 1.4:-72510016 | MS.gene20006:CDS |
| CCTTGCAGCCCTTCCAGATG+AGG | 0.586363 | 1.4:+72510300 | None:intergenic |
| TTATCCTTATCAGTAAGAGT+AGG | 0.591542 | 1.4:+72512390 | None:intergenic |
| TGATGCCAAAAGCCTTGCCA+TGG | 0.594137 | 1.4:+72509688 | None:intergenic |
| CTTACCATATGCCAGTTGCA+CGG | 0.596871 | 1.4:-72513576 | MS.gene20006:intron |
| CAATACTGCATTGGCAACAT+CGG | 0.597566 | 1.4:+72511121 | None:intergenic |
| CGGCAGTCACTTATTGTGAG+AGG | 0.598163 | 1.4:-72509969 | MS.gene20006:CDS |
| ACAGGTTCGAGCAGCCGTCA+AGG | 0.598249 | 1.4:-72510350 | MS.gene20006:intron |
| CTTTCTGGCAAACAACAACT+CGG | 0.599279 | 1.4:+72509652 | None:intergenic |
| GCACGGTTTGACTTCTCATG+GGG | 0.608536 | 1.4:-72513559 | MS.gene20006:CDS |
| AAGGTAGACTGACCTTTGAA+AGG | 0.609390 | 1.4:+72513150 | None:intergenic |
| GAGATATTGAGAGAAGCAGA+TGG | 0.612258 | 1.4:-72511486 | MS.gene20006:CDS |
| TTGTCTCTCGTGGAAATTTG+GGG | 0.612945 | 1.4:-72511458 | MS.gene20006:CDS |
| ATGCACCGGTGAATGTCCAT+CGG | 0.620402 | 1.4:+72510000 | None:intergenic |
| CTGCCGAGCCTGAAATGCAC+CGG | 0.620410 | 1.4:+72509986 | None:intergenic |
| GGTTGCTTTAGACCATGGCA+AGG | 0.624133 | 1.4:-72509700 | MS.gene20006:CDS |
| TAGATACCGACCTTCTCAGG+TGG | 0.626269 | 1.4:+72511426 | None:intergenic |
| ACTTAGGTAATACGCACATG+GGG | 0.626722 | 1.4:-72511974 | MS.gene20006:intron |
| GCCCGTTGTTGTCACACGTG+TGG | 0.628308 | 1.4:-72511189 | MS.gene20006:CDS |
| TAACTTAGGTAATACGCACA+TGG | 0.628609 | 1.4:-72511976 | MS.gene20006:intron |
| GACGACAGATATCACAGGCA+TGG | 0.630625 | 1.4:+72510049 | None:intergenic |
| CAGGTTATGCTAGATACTGT+AGG | 0.633111 | 1.4:-72513299 | MS.gene20006:CDS |
| CAGTAAGGGTCTCTGCCCCA+AGG | 0.637264 | 1.4:+72510865 | None:intergenic |
| TACAGGGTATAATCCAGTAA+GGG | 0.637369 | 1.4:+72510851 | None:intergenic |
| GACCACACGTGTGACAACAA+CGG | 0.637756 | 1.4:+72511187 | None:intergenic |
| TCGGTTGCTTCAGCACGAGT+AGG | 0.643981 | 1.4:+72511140 | None:intergenic |
| AACAACTTCTGTATGGCTAG+AGG | 0.646199 | 1.4:-72512961 | MS.gene20006:intron |
| TAATGAGAAATGTACTGCAG+AGG | 0.647825 | 1.4:+72510456 | None:intergenic |
| AGATACCGACCTTCTCAGGT+GGG | 0.649922 | 1.4:+72511427 | None:intergenic |
| CAAACAACAACTCGGTCATG+TGG | 0.652383 | 1.4:+72509660 | None:intergenic |
| CAGTGATGCAATTCTCCTTG+GGG | 0.653565 | 1.4:-72510880 | MS.gene20006:CDS |
| ACTTCCTCTCATTATACACC+CGG | 0.654885 | 1.4:-72511934 | MS.gene20006:CDS |
| GGGAGAGCCTATGAGCCACA+TGG | 0.657231 | 1.4:-72510491 | MS.gene20006:CDS |
| TGCTATTTATAAGTGTAACA+TGG | 0.661564 | 1.4:-72511219 | MS.gene20006:CDS |
| CGTGCCGGGTGTATAATGAG+AGG | 0.669231 | 1.4:+72511930 | None:intergenic |
| GTTGCCAATGCAGTATTGGA+TGG | 0.678151 | 1.4:-72511116 | MS.gene20006:intron |
| TATTTATAAGTGTAACATGG+CGG | 0.681522 | 1.4:-72511216 | MS.gene20006:CDS |
| CTTAGGTAATACGCACATGG+GGG | 0.693230 | 1.4:-72511973 | MS.gene20006:intron |
| TTAGGTAATACGCACATGGG+GGG | 0.704480 | 1.4:-72511972 | MS.gene20006:intron |
| GGAATGACGACAGATATCAC+AGG | 0.710120 | 1.4:+72510044 | None:intergenic |
| AGGAAGCTATTGATTCCATG+TGG | 0.726968 | 1.4:+72510476 | None:intergenic |
| TTTCACAATACAGGTCAGCG+AGG | 0.765838 | 1.4:-72512508 | MS.gene20006:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATACAAATAAACAAAA+TGG | + | chr1.4:72513304-72513323 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTATGTTATGT+AGG | - | chr1.4:72514574-72514593 | MS.gene20006:intron | 10.0% |
| !! | AATTCAGTTATAACTTATAA+GGG | - | chr1.4:72511848-72511867 | MS.gene20006:intron | 15.0% |
| !! | AGTATGCAATAAAAATAAAA+TGG | + | chr1.4:72512634-72512653 | None:intergenic | 15.0% |
| !! | ATATTTGTAGTTAGATTTAT+AGG | - | chr1.4:72512042-72512061 | MS.gene20006:intron | 15.0% |
| !! | TAATTCAGTTATAACTTATA+AGG | - | chr1.4:72511847-72511866 | MS.gene20006:intron | 15.0% |
| !! | TATATTAATAAAGAAGTCTA+TGG | + | chr1.4:72511917-72511936 | None:intergenic | 15.0% |
| !!! | AATTTTTTGTCTTTTATATC+AGG | - | chr1.4:72513765-72513784 | MS.gene20006:intron | 15.0% |
| !!! | ATATATATAAGTTGAATAAG+AGG | - | chr1.4:72510812-72510831 | MS.gene20006:intron | 15.0% |
| !!! | ATGATTTTATCATTACATTA+TGG | - | chr1.4:72514045-72514064 | MS.gene20006:intron | 15.0% |
| !!! | GTTTGATGTTTTTTTTTTTT+TGG | - | chr1.4:72509735-72509754 | MS.gene20006:CDS | 15.0% |
| !!! | TTTTTCTTGATGTAAATAAT+TGG | - | chr1.4:72509773-72509792 | MS.gene20006:intron | 15.0% |
| !! | AAATACTGAAAAAAAGAAGA+AGG | + | chr1.4:72514467-72514486 | None:intergenic | 20.0% |
| !! | AAATTCATACATACATATTC+AGG | + | chr1.4:72513404-72513423 | None:intergenic | 20.0% |
| !! | AACTATTATTCTTTGTGTTA+TGG | - | chr1.4:72510335-72510354 | MS.gene20006:CDS | 20.0% |
| !! | ACAAATATAAGAAGGAAATT+TGG | + | chr1.4:72512030-72512049 | None:intergenic | 20.0% |
| !! | ATCTAACTACAAATATAAGA+AGG | + | chr1.4:72512038-72512057 | None:intergenic | 20.0% |
| !! | ATGTAAGTAATTTACTCTTT+AGG | - | chr1.4:72510271-72510290 | MS.gene20006:intron | 20.0% |
| !! | TAACAAATGTAAAACTGATT+TGG | - | chr1.4:72512573-72512592 | MS.gene20006:intron | 20.0% |
| !! | TACATTTAATCATTCTTACA+GGG | + | chr1.4:72514755-72514774 | None:intergenic | 20.0% |
| !! | TCACAAGTAACAAAATTTAT+TGG | - | chr1.4:72510877-72510896 | MS.gene20006:CDS | 20.0% |
| !! | TGTAAATAATTGGTATTATG+AGG | - | chr1.4:72509783-72509802 | MS.gene20006:intron | 20.0% |
| !! | TTACATTTAATCATTCTTAC+AGG | + | chr1.4:72514756-72514775 | None:intergenic | 20.0% |
| !!! | AATAAATTGAAATCAGCTTT+TGG | - | chr1.4:72510152-72510171 | MS.gene20006:intron | 20.0% |
| !!! | ATATAGTGTTGTTATATATG+GGG | - | chr1.4:72514780-72514799 | MS.gene20006:intron | 20.0% |
| !!! | ATGAGAAGTCTTTTTAATAA+AGG | + | chr1.4:72514409-72514428 | None:intergenic | 20.0% |
| !!! | ATTTGTATTTTTTAGTGTCA+CGG | - | chr1.4:72513312-72513331 | MS.gene20006:intron | 20.0% |
| !!! | ATTTTCTCCAAGTTATTTTT+TGG | - | chr1.4:72511990-72512009 | MS.gene20006:intron | 20.0% |
| !!! | CAATGAATGAAATGTTTTAA+TGG | + | chr1.4:72510604-72510623 | None:intergenic | 20.0% |
| !!! | CATATAGTGTTGTTATATAT+GGG | - | chr1.4:72514779-72514798 | MS.gene20006:intron | 20.0% |
| !!! | GATGTTTTTTTTTTTTTGGT+TGG | - | chr1.4:72509739-72509758 | MS.gene20006:CDS | 20.0% |
| !!! | GATTTAAGATACTAAAAGAA+AGG | - | chr1.4:72510372-72510391 | MS.gene20006:intron | 20.0% |
| !!! | GTAACAATATACATGTATTT+TGG | - | chr1.4:72511338-72511357 | MS.gene20006:intron | 20.0% |
| !!! | TATTTATTTAGTTCCACATT+CGG | - | chr1.4:72514482-72514501 | MS.gene20006:intron | 20.0% |
| !!! | TCATATAGTGTTGTTATATA+TGG | - | chr1.4:72514778-72514797 | MS.gene20006:intron | 20.0% |
| !!! | TCTTCTCTAAAATTCATATA+GGG | - | chr1.4:72513143-72513162 | MS.gene20006:intron | 20.0% |
| !!! | TGAGAAGTCTTTTTAATAAA+GGG | + | chr1.4:72514408-72514427 | None:intergenic | 20.0% |
| !!! | TTCTTCTCTAAAATTCATAT+AGG | - | chr1.4:72513142-72513161 | MS.gene20006:intron | 20.0% |
| !!! | TTTGTTCATAAGTTGATTAT+AGG | - | chr1.4:72510633-72510652 | MS.gene20006:intron | 20.0% |
| ! | AAAATGACTTATCTTTCTGT+TGG | - | chr1.4:72512435-72512454 | MS.gene20006:CDS | 25.0% |
| ! | AAATTTGGAGATATATTCAC+GGG | + | chr1.4:72512959-72512978 | None:intergenic | 25.0% |
| ! | AACGATATTAAAACCTCAAT+CGG | - | chr1.4:72514817-72514836 | MS.gene20006:intron | 25.0% |
| ! | AAGAGACATTGGAAAATTTA+AGG | - | chr1.4:72511149-72511168 | MS.gene20006:CDS | 25.0% |
| ! | AAGTTGAATAAGAGGATAAA+TGG | - | chr1.4:72510820-72510839 | MS.gene20006:CDS | 25.0% |
| ! | ACAAAAAAGAACTTAGATGA+GGG | + | chr1.4:72513589-72513608 | None:intergenic | 25.0% |
| ! | AGAGACATTGGAAAATTTAA+GGG | - | chr1.4:72511150-72511169 | MS.gene20006:CDS | 25.0% |
| ! | ATAGGATCCAAAAAATAACT+TGG | + | chr1.4:72512000-72512019 | None:intergenic | 25.0% |
| ! | ATCAAATGAATCAATCTTGA+AGG | - | chr1.4:72514947-72514966 | MS.gene20006:intron | 25.0% |
| ! | CAAAACAAATGTGAAAAACA+AGG | + | chr1.4:72510303-72510322 | None:intergenic | 25.0% |
| ! | CAAATTTGGAGATATATTCA+CGG | + | chr1.4:72512960-72512979 | None:intergenic | 25.0% |
| ! | GAAAAATTTCTACAAAGAGA+CGG | + | chr1.4:72510705-72510724 | None:intergenic | 25.0% |
| ! | GACATACTATTAAATGATTG+TGG | - | chr1.4:72511247-72511266 | MS.gene20006:intron | 25.0% |
| ! | GTACACTTACATTTAATCTT+TGG | + | chr1.4:72512506-72512525 | None:intergenic | 25.0% |
| ! | GTCTATTTATGATTAGAGAT+GGG | - | chr1.4:72510244-72510263 | MS.gene20006:intron | 25.0% |
| ! | TATGTATGTATGAATTTGAC+AGG | - | chr1.4:72513407-72513426 | MS.gene20006:intron | 25.0% |
| ! | TATTTATAAGTGTAACATGG+CGG | - | chr1.4:72513452-72513471 | MS.gene20006:intron | 25.0% |
| ! | TCTTCTGTTATAATTTGGAT+TGG | - | chr1.4:72511016-72511035 | MS.gene20006:intron | 25.0% |
| ! | TGTAAATAACCTTAGCTAAA+TGG | - | chr1.4:72510920-72510939 | MS.gene20006:intron | 25.0% |
| ! | TGTGTTATGGAAATTAAGTA+TGG | - | chr1.4:72510348-72510367 | MS.gene20006:CDS | 25.0% |
| ! | TTAGTGAGTAAAATGTCAAA+AGG | + | chr1.4:72512675-72512694 | None:intergenic | 25.0% |
| ! | TTTATGATTGTGCTTAATTG+TGG | - | chr1.4:72513104-72513123 | MS.gene20006:intron | 25.0% |
| !! | AATAAACAAAATGGAAGCAT+AGG | + | chr1.4:72513295-72513314 | None:intergenic | 25.0% |
| !! | AATTTTTCCAACTGTAGAAA+TGG | + | chr1.4:72513847-72513866 | None:intergenic | 25.0% |
| !! | ACTTATAAATAGCAGCTTTT+TGG | + | chr1.4:72513443-72513462 | None:intergenic | 25.0% |
| !! | ATTCGATTTTGTTGCAATTT+TGG | - | chr1.4:72514518-72514537 | MS.gene20006:intron | 25.0% |
| !! | CTATTACCAGTAAATTTTAG+CGG | - | chr1.4:72511495-72511514 | MS.gene20006:CDS | 25.0% |
| !! | GCATTGTTTATGTTTTCTAA+TGG | + | chr1.4:72512916-72512935 | None:intergenic | 25.0% |
| !! | TGCTATTTATAAGTGTAACA+TGG | - | chr1.4:72513449-72513468 | MS.gene20006:intron | 25.0% |
| !! | TTAAATTTTCCAATGTCTCT+TGG | + | chr1.4:72511150-72511169 | None:intergenic | 25.0% |
| !!! | AAGGGTGATACTATTTTTAT+CGG | - | chr1.4:72511660-72511679 | MS.gene20006:intron | 25.0% |
| !!! | ATGTATTTTGGTTCAATTAC+AGG | - | chr1.4:72511350-72511369 | MS.gene20006:intron | 25.0% |
| !!! | CTTGTTTTTCACATTTGTTT+TGG | - | chr1.4:72510301-72510320 | MS.gene20006:CDS | 25.0% |
| !!! | TAATTTGTTCAGATATTCTG+TGG | - | chr1.4:72513999-72514018 | MS.gene20006:intron | 25.0% |
| !!! | TGATTGTGGTTTTAATACAT+TGG | - | chr1.4:72511261-72511280 | MS.gene20006:intron | 25.0% |
| !!! | TTTTAATTGCGAAAAGTAGT+AGG | + | chr1.4:72513911-72513930 | None:intergenic | 25.0% |
| AAAAAAGAACTTAGATGAGG+GGG | + | chr1.4:72513587-72513606 | None:intergenic | 30.0% | |
| AAAGAGACGGTTAAAAATGA+AGG | + | chr1.4:72510692-72510711 | None:intergenic | 30.0% | |
| AACTATTTACACAATTGACG+AGG | - | chr1.4:72512526-72512545 | MS.gene20006:intron | 30.0% | |
| AAGAAGACTGTCAAATATGT+GGG | - | chr1.4:72514157-72514176 | MS.gene20006:CDS | 30.0% | |
| AAGAGGATAAATGGTATTAC+AGG | - | chr1.4:72510829-72510848 | MS.gene20006:CDS | 30.0% | |
| AAGCAGAAAGTCTATTGTTT+AGG | + | chr1.4:72513048-72513067 | None:intergenic | 30.0% | |
| ACAAAAATTATAGGCACACT+TGG | - | chr1.4:72510514-72510533 | MS.gene20006:CDS | 30.0% | |
| ACGATATTAAAACCTCAATC+GGG | - | chr1.4:72514818-72514837 | MS.gene20006:intron | 30.0% | |
| AGAATGACAATGCTTATGTT+TGG | + | chr1.4:72510098-72510117 | None:intergenic | 30.0% | |
| AGCAGAAAGTCTATTGTTTA+GGG | + | chr1.4:72513047-72513066 | None:intergenic | 30.0% | |
| AGGAAATTTGGTAGACTTAT+AGG | + | chr1.4:72512018-72512037 | None:intergenic | 30.0% | |
| ATAACCTTAGCTAAATGGAA+TGG | - | chr1.4:72510925-72510944 | MS.gene20006:intron | 30.0% | |
| ATCATGGATACCTTAGTTAA+AGG | + | chr1.4:72511624-72511643 | None:intergenic | 30.0% | |
| ATCGGTAAATATCTGTTTAC+AGG | - | chr1.4:72511678-72511697 | MS.gene20006:CDS | 30.0% | |
| ATTCTATTCACTTGCTCAAA+GGG | - | chr1.4:72514240-72514259 | MS.gene20006:intron | 30.0% | |
| ATTTATAAGTGTAACATGGC+GGG | - | chr1.4:72513453-72513472 | MS.gene20006:intron | 30.0% | |
| ATTTGATCCAGTATTCGATT+CGG | + | chr1.4:72514934-72514953 | None:intergenic | 30.0% | |
| CAAAAAAGAACTTAGATGAG+GGG | + | chr1.4:72513588-72513607 | None:intergenic | 30.0% | |
| CAGACATAGTTCAATCTTTA+AGG | - | chr1.4:72511735-72511754 | MS.gene20006:intron | 30.0% | |
| CATTGTAGTACACATTATCA+TGG | + | chr1.4:72511592-72511611 | None:intergenic | 30.0% | |
| CCAAATAATAATGCAACAAC+TGG | + | chr1.4:72510182-72510201 | None:intergenic | 30.0% | |
| CCAGCTATGACAAAAATTAT+AGG | - | chr1.4:72510505-72510524 | MS.gene20006:CDS | 30.0% | |
| CCAGTTGTTGCATTATTATT+TGG | - | chr1.4:72510179-72510198 | MS.gene20006:intron | 30.0% | |
| CGTCTATTTATGATTAGAGA+TGG | - | chr1.4:72510243-72510262 | MS.gene20006:intron | 30.0% | |
| CTTGTTAAGTAGAAAGACTA+AGG | + | chr1.4:72511946-72511965 | None:intergenic | 30.0% | |
| GACAAAAAAGAACTTAGATG+AGG | + | chr1.4:72513590-72513609 | None:intergenic | 30.0% | |
| GCTGTTCTTCTGTTATAATT+TGG | - | chr1.4:72511011-72511030 | MS.gene20006:intron | 30.0% | |
| GTAGTGAAATTGACATAATG+TGG | - | chr1.4:72512332-72512351 | MS.gene20006:intron | 30.0% | |
| GTATGACAAGAATACAAAAG+AGG | + | chr1.4:72513979-72513998 | None:intergenic | 30.0% | |
| GTGATTATCTCCTTTAACTA+AGG | - | chr1.4:72511611-72511630 | MS.gene20006:intron | 30.0% | |
| GTTATAACTGAATTACCCTA+AGG | + | chr1.4:72511842-72511861 | None:intergenic | 30.0% | |
| TAAACATGTGATCCAACAAA+TGG | + | chr1.4:72511547-72511566 | None:intergenic | 30.0% | |
| TAAGAAGACTGTCAAATATG+TGG | - | chr1.4:72514156-72514175 | MS.gene20006:CDS | 30.0% | |
| TACCATTCGTGATTGTATAA+TGG | + | chr1.4:72512603-72512622 | None:intergenic | 30.0% | |
| TATTCTATTCACTTGCTCAA+AGG | - | chr1.4:72514239-72514258 | MS.gene20006:intron | 30.0% | |
| TCTTACTGATAAGGATAAAG+AGG | - | chr1.4:72512283-72512302 | MS.gene20006:intron | 30.0% | |
| TGCACGTATGGAAAATAAAT+TGG | + | chr1.4:72511294-72511313 | None:intergenic | 30.0% | |
| TTATCCTTATCAGTAAGAGT+AGG | + | chr1.4:72512281-72512300 | None:intergenic | 30.0% | |
| TTATTCACGACTTGTAATTC+TGG | + | chr1.4:72511396-72511415 | None:intergenic | 30.0% | |
| TTTGTCGTATTTGAATAGTC+CGG | - | chr1.4:72513604-72513623 | MS.gene20006:intron | 30.0% | |
| ! | CATGGCTAATATGAAAGTAT+TGG | + | chr1.4:72511574-72511593 | None:intergenic | 30.0% |
| ! | CCTATAATTTTTGTCATAGC+TGG | + | chr1.4:72510508-72510527 | None:intergenic | 30.0% |
| ! | GACATTTTACTCACTAACTT+AGG | - | chr1.4:72512678-72512697 | MS.gene20006:intron | 30.0% |
| ! | TAACATCAGATTTTTCTGAC+CGG | + | chr1.4:72513271-72513290 | None:intergenic | 30.0% |
| ! | TTCTTTTTCCTGAAACATAC+AGG | - | chr1.4:72514300-72514319 | MS.gene20006:intron | 30.0% |
| ! | TTTCTGTTGGTCTGTAAATA+TGG | - | chr1.4:72512448-72512467 | MS.gene20006:CDS | 30.0% |
| ! | TTTTGTACTCTAAGTGTAAG+TGG | - | chr1.4:72512131-72512150 | MS.gene20006:intron | 30.0% |
| !! | AGTTGATTTGTCTTCAATTG+AGG | + | chr1.4:72514648-72514667 | None:intergenic | 30.0% |
| !! | TAGGAAGCATTATATGAAAC+AGG | - | chr1.4:72512061-72512080 | MS.gene20006:intron | 30.0% |
| !!! | AAATGCTAGTGTAGTTTTGT+TGG | - | chr1.4:72509869-72509888 | MS.gene20006:intron | 30.0% |
| AAATGAAGGAGTGAAAAGTG+CGG | + | chr1.4:72510678-72510697 | None:intergenic | 35.0% | |
| AACTTAGGTAATACGCACAT+GGG | - | chr1.4:72512693-72512712 | MS.gene20006:intron | 35.0% | |
| AAGTGCGGTAAATCTGATAA+AGG | + | chr1.4:72510663-72510682 | None:intergenic | 35.0% | |
| AATAGTATCACCCTTCTTCA+CGG | + | chr1.4:72511655-72511674 | None:intergenic | 35.0% | |
| ACTGTAGAAATGGTTTCTAC+AGG | + | chr1.4:72513837-72513856 | None:intergenic | 35.0% | |
| ATAACTGAATTACCCTAAGG+AGG | + | chr1.4:72511839-72511858 | None:intergenic | 35.0% | |
| ATTACCATCCAATACTGCAT+TGG | + | chr1.4:72513559-72513578 | None:intergenic | 35.0% | |
| ATTGTCTCTCGTGGAAATTT+GGG | - | chr1.4:72513209-72513228 | MS.gene20006:CDS | 35.0% | |
| ATTTGATCCAGTATTCGACT+CGG | + | chr1.4:72514859-72514878 | None:intergenic | 35.0% | |
| CAAAAATATGTGTCTGCTTG+AGG | + | chr1.4:72512987-72513006 | None:intergenic | 35.0% | |
| CTGTAGAAATGGTTTCTACA+GGG | + | chr1.4:72513836-72513855 | None:intergenic | 35.0% | |
| GAAGTGAAACAACTTCTGTA+TGG | - | chr1.4:72511700-72511719 | MS.gene20006:CDS | 35.0% | |
| GACCATTATACAATCACGAA+TGG | - | chr1.4:72512598-72512617 | MS.gene20006:intron | 35.0% | |
| GTAGAAACCATTTCTACAGT+TGG | - | chr1.4:72513837-72513856 | MS.gene20006:intron | 35.0% | |
| GTGATCCAACAAATGGAAAA+AGG | + | chr1.4:72511540-72511559 | None:intergenic | 35.0% | |
| TAAATAAAGAGGGAGAGAGA+AGG | + | chr1.4:72509690-72509709 | None:intergenic | 35.0% | |
| TAACTTAGGTAATACGCACA+TGG | - | chr1.4:72512692-72512711 | MS.gene20006:intron | 35.0% | |
| TAATGAGAAATGTACTGCAG+AGG | + | chr1.4:72514215-72514234 | None:intergenic | 35.0% | |
| TACACTAATTACCCTTCAGA+AGG | + | chr1.4:72511321-72511340 | None:intergenic | 35.0% | |
| TACAGGGTATAATCCAGTAA+GGG | + | chr1.4:72513820-72513839 | None:intergenic | 35.0% | |
| TCAAACGTATACTAGAGAGA+CGG | + | chr1.4:72513374-72513393 | None:intergenic | 35.0% | |
| TCCGGTATGATCTAAGTTAT+GGG | - | chr1.4:72513622-72513641 | MS.gene20006:intron | 35.0% | |
| TCTTCCTACTCTTACTGATA+AGG | - | chr1.4:72512274-72512293 | MS.gene20006:intron | 35.0% | |
| TGCAAAGATCGAAAATGTAG+AGG | - | chr1.4:72513005-72513024 | MS.gene20006:CDS | 35.0% | |
| TGGTATCTGTTTCACAATAC+AGG | - | chr1.4:72512151-72512170 | MS.gene20006:intron | 35.0% | |
| TTCAACTTGATCTACCATAC+TGG | + | chr1.4:72509849-72509868 | None:intergenic | 35.0% | |
| ! | AATTTTCCAATGTCTCTTGG+TGG | + | chr1.4:72511147-72511166 | None:intergenic | 35.0% |
| ! | ACTTTTCTTTGACCTCCTTA+GGG | - | chr1.4:72511824-72511843 | MS.gene20006:intron | 35.0% |
| ! | AGTGTTGTTATATATGGGGA+AGG | - | chr1.4:72514784-72514803 | MS.gene20006:intron | 35.0% |
| ! | GTCTACCTTTTTCCATTTGT+TGG | - | chr1.4:72511532-72511551 | MS.gene20006:intron | 35.0% |
| ! | GTGTTGTTATATATGGGGAA+GGG | - | chr1.4:72514785-72514804 | MS.gene20006:intron | 35.0% |
| ! | GTTTATGTTTTCTAATGGCG+AGG | + | chr1.4:72512911-72512930 | None:intergenic | 35.0% |
| ! | TAAGGTATCCATGATTATGC+AGG | - | chr1.4:72511629-72511648 | MS.gene20006:intron | 35.0% |
| ! | TACTTTTCTTTGACCTCCTT+AGG | - | chr1.4:72511823-72511842 | MS.gene20006:intron | 35.0% |
| ! | TGTCACTTGTTAGTTATCTG+CGG | - | chr1.4:72513947-72513966 | MS.gene20006:intron | 35.0% |
| !! | AAATTTTAGCGGCCTTTCAA+AGG | - | chr1.4:72511506-72511525 | MS.gene20006:CDS | 35.0% |
| !! | ATTTTGGTATCTTGCTGACA+TGG | - | chr1.4:72514534-72514553 | MS.gene20006:intron | 35.0% |
| !! | GAGGTTTTAATATCGTTCCT+TGG | + | chr1.4:72514814-72514833 | None:intergenic | 35.0% |
| !! | GTTTGGTTTCACTTTTGAAG+TGG | + | chr1.4:72510081-72510100 | None:intergenic | 35.0% |
| !!! | ACTTTTGAAGTGGTCCAAAT+TGG | + | chr1.4:72510071-72510090 | None:intergenic | 35.0% |
| AAAAACGATGCGACACTTTC+TGG | - | chr1.4:72512212-72512231 | MS.gene20006:intron | 40.0% | |
| AACAACTTCTGTATGGCTAG+AGG | - | chr1.4:72511707-72511726 | MS.gene20006:CDS | 40.0% | |
| AACAGAAGCCTTAACCTTGA+CGG | + | chr1.4:72514335-72514354 | None:intergenic | 40.0% | |
| AAGCACAAAAAAACTCTGCG+CGG | - | chr1.4:72511183-72511202 | MS.gene20006:CDS | 40.0% | |
| AAGGTAGACTGACCTTTGAA+AGG | + | chr1.4:72511521-72511540 | None:intergenic | 40.0% | |
| AAGTGATGTGTCTGCTTCAA+GGG | + | chr1.4:72511436-72511455 | None:intergenic | 40.0% | |
| ACCTTAGCTAAATGGAATGG+AGG | - | chr1.4:72510928-72510947 | MS.gene20006:intron | 40.0% | |
| ACGTGCAAATACCTTCTGAA+GGG | - | chr1.4:72511307-72511326 | MS.gene20006:intron | 40.0% | |
| ACTAAGACATGCAACTTGCA+AGG | + | chr1.4:72511043-72511062 | None:intergenic | 40.0% | |
| ACTTAGGTAATACGCACATG+GGG | - | chr1.4:72512694-72512713 | MS.gene20006:intron | 40.0% | |
| ACTTCCTCTCATTATACACC+CGG | - | chr1.4:72512734-72512753 | MS.gene20006:intron | 40.0% | |
| AGAATACCACCAAGAGACAT+TGG | - | chr1.4:72511138-72511157 | MS.gene20006:CDS | 40.0% | |
| ATAGGTTCCTCAAGAAGCAA+AGG | + | chr1.4:72509623-72509642 | None:intergenic | 40.0% | |
| ATGACTGTCATATCCGAATG+TGG | + | chr1.4:72514498-72514517 | None:intergenic | 40.0% | |
| ATTATTCTACTGCACTGTCC+AGG | - | chr1.4:72514102-72514121 | MS.gene20006:CDS | 40.0% | |
| CAACTGGCATATGGTAAGAA+AGG | + | chr1.4:72511090-72511109 | None:intergenic | 40.0% | |
| CAGGTTATGCTAGATACTGT+AGG | - | chr1.4:72511369-72511388 | MS.gene20006:intron | 40.0% | |
| CATTGATGTAATCAAGCTGC+AGG | + | chr1.4:72512390-72512409 | None:intergenic | 40.0% | |
| CATTGTCTCTCGTGGAAATT+TGG | - | chr1.4:72513208-72513227 | MS.gene20006:CDS | 40.0% | |
| CCCCATAACTTAGATCATAC+CGG | + | chr1.4:72513626-72513645 | None:intergenic | 40.0% | |
| CCGGTATGATCTAAGTTATG+GGG | - | chr1.4:72513623-72513642 | MS.gene20006:intron | 40.0% | |
| CCTTAGCTAAATGGAATGGA+GGG | - | chr1.4:72510929-72510948 | MS.gene20006:intron | 40.0% | |
| CTACAGGGTATAATCCAGTA+AGG | + | chr1.4:72513821-72513840 | None:intergenic | 40.0% | |
| CTGCTTGAGGTCTTCAAATT+TGG | + | chr1.4:72512974-72512993 | None:intergenic | 40.0% | |
| CTTGTCTTCTTCTGTGTGTT+TGG | - | chr1.4:72509931-72509950 | MS.gene20006:intron | 40.0% | |
| GAAAGGCCGCTAAAATTTAC+TGG | + | chr1.4:72511504-72511523 | None:intergenic | 40.0% | |
| GAGAGAACATAAAACGTAGC+AGG | + | chr1.4:72512793-72512812 | None:intergenic | 40.0% | |
| GAGATATTGAGAGAAGCAGA+TGG | - | chr1.4:72513182-72513201 | MS.gene20006:CDS | 40.0% | |
| GATTGTAAACTTTCTCTGCC+TGG | + | chr1.4:72514123-72514142 | None:intergenic | 40.0% | |
| GCAGATAACTAACAAGTGAC+AGG | + | chr1.4:72513948-72513967 | None:intergenic | 40.0% | |
| GTAGCTTCTTTGTTCTGATC+TGG | + | chr1.4:72511468-72511487 | None:intergenic | 40.0% | |
| GTCCGGTATGATCTAAGTTA+TGG | - | chr1.4:72513621-72513640 | MS.gene20006:intron | 40.0% | |
| TACGTGCAAATACCTTCTGA+AGG | - | chr1.4:72511306-72511325 | MS.gene20006:intron | 40.0% | |
| TAGCAGGTATATCCCTTACA+TGG | + | chr1.4:72512777-72512796 | None:intergenic | 40.0% | |
| TAGGTTCCTCAAGAAGCAAA+GGG | + | chr1.4:72509622-72509641 | None:intergenic | 40.0% | |
| TCTTGAGGAACCTATTAGGA+TGG | - | chr1.4:72509628-72509647 | MS.gene20006:CDS | 40.0% | |
| TGAAGACAAATCAACTCCGA+TGG | - | chr1.4:72514652-72514671 | MS.gene20006:intron | 40.0% | |
| TGAAGATGTTCGCCATGTAA+GGG | - | chr1.4:72512762-72512781 | MS.gene20006:intron | 40.0% | |
| TGCTTCTTGAGGAACCTATT+AGG | - | chr1.4:72509624-72509643 | MS.gene20006:CDS | 40.0% | |
| TGTCTGCTTCAAGGGTAATT+GGG | + | chr1.4:72511428-72511447 | None:intergenic | 40.0% | |
| TGTGAACTACAGCATTTGTC+TGG | + | chr1.4:72513080-72513099 | None:intergenic | 40.0% | |
| TTGTCTCTCGTGGAAATTTG+GGG | - | chr1.4:72513210-72513229 | MS.gene20006:CDS | 40.0% | |
| ! | AATGTCTCTTGGTGGTATTC+TGG | + | chr1.4:72511139-72511158 | None:intergenic | 40.0% |
| ! | ATTGATTCCATGTGGCTCAT+AGG | + | chr1.4:72514187-72514206 | None:intergenic | 40.0% |
| ! | CAATACTGCATTGGCAACAT+CGG | + | chr1.4:72513550-72513569 | None:intergenic | 40.0% |
| ! | CTTTCTGGCAAACAACAACT+CGG | + | chr1.4:72515019-72515038 | None:intergenic | 40.0% |
| ! | TGTGTTGTTGTTGTCCAGTA+TGG | - | chr1.4:72509832-72509851 | MS.gene20006:intron | 40.0% |
| ! | TTGAAGGTTGCTTTAGACCA+TGG | - | chr1.4:72514963-72514982 | MS.gene20006:intron | 40.0% |
| !! | AGGAAGCTATTGATTCCATG+TGG | + | chr1.4:72514195-72514214 | None:intergenic | 40.0% |
| !! | GTTGTTGTTTGCCAGAAAGT+TGG | - | chr1.4:72515020-72515039 | MS.gene20006:CDS | 40.0% |
| !! | TCAGAAGGTATTTGCACGTA+TGG | + | chr1.4:72511306-72511325 | None:intergenic | 40.0% |
| !!! | GAATTTGCCTTTTTTCGTGC+AGG | - | chr1.4:72514908-72514927 | MS.gene20006:intron | 40.0% |
| AACGTATACTAGAGAGACGG+AGG | + | chr1.4:72513371-72513390 | None:intergenic | 45.0% | |
| AAGTAGATACCGACCTTCTC+AGG | + | chr1.4:72513248-72513267 | None:intergenic | 45.0% | |
| ACAGATATCACAGGCATGGT+TGG | + | chr1.4:72514618-72514637 | None:intergenic | 45.0% | |
| ACATTCCTGCATCAAGGCAT+CGG | + | chr1.4:72510570-72510589 | None:intergenic | 45.0% | |
| ACGGGCCTGCAAATGAAAAT+CGG | + | chr1.4:72512941-72512960 | None:intergenic | 45.0% | |
| AGAAGGTCGGTATCTACTTC+CGG | - | chr1.4:72513249-72513268 | MS.gene20006:CDS | 45.0% | |
| AGACGGAGGAATGCTGTAAA+AGG | + | chr1.4:72513357-72513376 | None:intergenic | 45.0% | |
| AGAGAGAAGGAGATACTGAC+AGG | + | chr1.4:72509677-72509696 | None:intergenic | 45.0% | |
| AGGATGGAAGCCATCCTAAT+AGG | + | chr1.4:72509641-72509660 | None:intergenic | 45.0% | |
| ATCATCTGCTTCACCTCATC+TGG | - | chr1.4:72514355-72514374 | MS.gene20006:intron | 45.0% | |
| ATGGAGGGAGTAACACTTTG+TGG | - | chr1.4:72510944-72510963 | MS.gene20006:intron | 45.0% | |
| ATTATGCAGGCCGTGAAGAA+GGG | - | chr1.4:72511642-72511661 | MS.gene20006:intron | 45.0% | |
| CAAACAACAACTCGGTCATG+TGG | + | chr1.4:72515011-72515030 | None:intergenic | 45.0% | |
| CAAGTGATGTGTCTGCTTCA+AGG | + | chr1.4:72511437-72511456 | None:intergenic | 45.0% | |
| CAGTGATGCAATTCTCCTTG+GGG | - | chr1.4:72513788-72513807 | MS.gene20006:intron | 45.0% | |
| CCCTCCATTCCATTTAGCTA+AGG | + | chr1.4:72510932-72510951 | None:intergenic | 45.0% | |
| CGATGTTGCCAATGCAGTAT+TGG | - | chr1.4:72513548-72513567 | MS.gene20006:CDS | 45.0% | |
| CTAACAAGTGACAGGATCAC+AGG | + | chr1.4:72513940-72513959 | None:intergenic | 45.0% | |
| CTACACCTCCAGAACCAATT+TGG | - | chr1.4:72510054-72510073 | MS.gene20006:CDS | 45.0% | |
| CTGAAGATGTTCGCCATGTA+AGG | - | chr1.4:72512761-72512780 | MS.gene20006:intron | 45.0% | |
| CTTACCATATGCCAGTTGCA+CGG | - | chr1.4:72511092-72511111 | MS.gene20006:intron | 45.0% | |
| CTTAGGTAATACGCACATGG+GGG | - | chr1.4:72512695-72512714 | MS.gene20006:intron | 45.0% | |
| GAAGGAGATACTGACAGGTT+TGG | + | chr1.4:72509672-72509691 | None:intergenic | 45.0% | |
| GAGATACTGACAGGTTTGGA+TGG | + | chr1.4:72509668-72509687 | None:intergenic | 45.0% | |
| GATGGTATCATTGTCTCTCG+TGG | - | chr1.4:72513200-72513219 | MS.gene20006:CDS | 45.0% | |
| GCAGTGATGCAATTCTCCTT+GGG | - | chr1.4:72513787-72513806 | MS.gene20006:intron | 45.0% | |
| GGAATGACGACAGATATCAC+AGG | + | chr1.4:72514627-72514646 | None:intergenic | 45.0% | |
| GTGTCTGCTTCAAGGGTAAT+TGG | + | chr1.4:72511429-72511448 | None:intergenic | 45.0% | |
| TACCAGACATTCCTGCATCA+AGG | + | chr1.4:72510576-72510595 | None:intergenic | 45.0% | |
| TATATGGGGAAGGGTAACCA+AGG | - | chr1.4:72514794-72514813 | MS.gene20006:intron | 45.0% | |
| TGCTCGAACCTGTATGTTTC+AGG | + | chr1.4:72514311-72514330 | None:intergenic | 45.0% | |
| TTAGGTAATACGCACATGGG+GGG | - | chr1.4:72512696-72512715 | MS.gene20006:intron | 45.0% | |
| TTTCACAATACAGGTCAGCG+AGG | - | chr1.4:72512160-72512179 | MS.gene20006:intron | 45.0% | |
| ! | GAAGTGGTCCAAATTGGTTC+TGG | + | chr1.4:72510065-72510084 | None:intergenic | 45.0% |
| ! | GTTGCCAATGCAGTATTGGA+TGG | - | chr1.4:72513552-72513571 | MS.gene20006:CDS | 45.0% |
| ! | TGCACGGTTTGACTTCTCAT+GGG | - | chr1.4:72511108-72511127 | MS.gene20006:intron | 45.0% |
| ! | TGCGTCCGATTTTCATTTGC+AGG | - | chr1.4:72512933-72512952 | MS.gene20006:intron | 45.0% |
| ! | TTAGACCATGGCAAGGCTTT+TGG | - | chr1.4:72514975-72514994 | MS.gene20006:intron | 45.0% |
| ! | TTGCACGGTTTGACTTCTCA+TGG | - | chr1.4:72511107-72511126 | MS.gene20006:intron | 45.0% |
| !! | ATCATTCTTACAGGGTGTCG+AGG | + | chr1.4:72514747-72514766 | None:intergenic | 45.0% |
| !! | AAATAAATAAATAAATAAAG+AGG | + | chr1.4:72509701-72509720 | None:intergenic | 5.0% |
| !! | AATAAATAAATAAATAAAGA+GGG | + | chr1.4:72509700-72509719 | None:intergenic | 5.0% |
| !!! | TAGATTTTTTTTTTTTTTTT+TGG | - | chr1.4:72512475-72512494 | MS.gene20006:CDS | 5.0% |
| ACCACACGTGTGACAACAAC+GGG | + | chr1.4:72513483-72513502 | None:intergenic | 50.0% | |
| AGATACCGACCTTCTCAGGT+GGG | + | chr1.4:72513244-72513263 | None:intergenic | 50.0% | |
| ATACAGGTCAGCGAGGTGAA+TGG | - | chr1.4:72512167-72512186 | MS.gene20006:intron | 50.0% | |
| ATTACCCGATGCCTTGATGC+AGG | - | chr1.4:72510562-72510581 | MS.gene20006:intron | 50.0% | |
| CAAACCGTGCAACTGGCATA+TGG | + | chr1.4:72511099-72511118 | None:intergenic | 50.0% | |
| CAACTCCGATGGACATTCAC+CGG | - | chr1.4:72514663-72514682 | MS.gene20006:intron | 50.0% | |
| CAATCGGGAAAATGCTGTGC+AGG | - | chr1.4:72514833-72514852 | MS.gene20006:intron | 50.0% | |
| CGGCAGTCACTTATTGTGAG+AGG | - | chr1.4:72514699-72514718 | MS.gene20006:intron | 50.0% | |
| CTGACGAGTCACCAACTTTC+TGG | + | chr1.4:72515034-72515053 | None:intergenic | 50.0% | |
| CTGCTTCACCTCATCTGGAA+GGG | - | chr1.4:72514360-72514379 | MS.gene20006:intron | 50.0% | |
| CTTCACGGCCTGCATAATCA+TGG | + | chr1.4:72511640-72511659 | None:intergenic | 50.0% | |
| GACATTCACCGGTGCATTTC+AGG | - | chr1.4:72514674-72514693 | MS.gene20006:intron | 50.0% | |
| GACCACACGTGTGACAACAA+CGG | + | chr1.4:72513484-72513503 | None:intergenic | 50.0% | |
| GACGACAGATATCACAGGCA+TGG | + | chr1.4:72514622-72514641 | None:intergenic | 50.0% | |
| GAGAAGTCAAACCGTGCAAC+TGG | + | chr1.4:72511106-72511125 | None:intergenic | 50.0% | |
| GATAGATCTCCCACCTGAGA+AGG | - | chr1.4:72513232-72513251 | MS.gene20006:CDS | 50.0% | |
| GATTATGCAGGCCGTGAAGA+AGG | - | chr1.4:72511641-72511660 | MS.gene20006:intron | 50.0% | |
| GATTCGGCCTGCACGAAAAA+AGG | + | chr1.4:72514918-72514937 | None:intergenic | 50.0% | |
| GGCAGTGATGCAATTCTCCT+TGG | - | chr1.4:72513786-72513805 | MS.gene20006:intron | 50.0% | |
| TAGATACCGACCTTCTCAGG+TGG | + | chr1.4:72513245-72513264 | None:intergenic | 50.0% | |
| TCTGCTTCACCTCATCTGGA+AGG | - | chr1.4:72514359-72514378 | MS.gene20006:intron | 50.0% | |
| TGACAGGTTTGGATGGCTCT+AGG | + | chr1.4:72509661-72509680 | None:intergenic | 50.0% | |
| TGATGCCAAAAGCCTTGCCA+TGG | + | chr1.4:72514983-72515002 | None:intergenic | 50.0% | |
| TGCCTTGATGCAGGAATGTC+TGG | - | chr1.4:72510571-72510590 | MS.gene20006:intron | 50.0% | |
| TTCCTCAAGAAGCAAAGGGC+TGG | + | chr1.4:72509618-72509637 | None:intergenic | 50.0% | |
| ! | AGGTCTTTTCCCTATGCTGG+CGG | - | chr1.4:72514719-72514738 | MS.gene20006:intron | 50.0% |
| ! | ATGCACCGGTGAATGTCCAT+CGG | + | chr1.4:72514671-72514690 | None:intergenic | 50.0% |
| ! | CATTCCTGCATCAAGGCATC+GGG | + | chr1.4:72510569-72510588 | None:intergenic | 50.0% |
| ! | GAGAGGTCTTTTCCCTATGC+TGG | - | chr1.4:72514716-72514735 | MS.gene20006:intron | 50.0% |
| ! | GCACAGCATTTTCCCGATTG+AGG | + | chr1.4:72514833-72514852 | None:intergenic | 50.0% |
| ! | GCACGGTTTGACTTCTCATG+GGG | - | chr1.4:72511109-72511128 | MS.gene20006:intron | 50.0% |
| ! | GGTTGCTTTAGACCATGGCA+AGG | - | chr1.4:72514968-72514987 | MS.gene20006:intron | 50.0% |
| !! | AGGTTTGGATGGCTCTAGGA+TGG | + | chr1.4:72509657-72509676 | None:intergenic | 50.0% |
| !! | GTGGTCCAAATTGGTTCTGG+AGG | + | chr1.4:72510062-72510081 | None:intergenic | 50.0% |
| CGTGCCGGGTGTATAATGAG+AGG | + | chr1.4:72512741-72512760 | None:intergenic | 55.0% | |
| GATCTCCCACCTGAGAAGGT+CGG | - | chr1.4:72513236-72513255 | MS.gene20006:CDS | 55.0% | |
| GTCCAGCCCTTTGCTTCTTG+AGG | - | chr1.4:72509613-72509632 | MS.gene20006:CDS | 55.0% | |
| GTGCAGGCCGAATCGAATAC+TGG | - | chr1.4:72514924-72514943 | MS.gene20006:intron | 55.0% | |
| TCACCGGTGCATTTCAGGCT+CGG | - | chr1.4:72514679-72514698 | MS.gene20006:intron | 55.0% | |
| TCGAGCAGCCGTCAAGGTTA+AGG | - | chr1.4:72514324-72514343 | MS.gene20006:intron | 55.0% | |
| TCGGTTGCTTCAGCACGAGT+AGG | + | chr1.4:72513531-72513550 | None:intergenic | 55.0% | |
| ACAGGTTCGAGCAGCCGTCA+AGG | - | chr1.4:72514318-72514337 | MS.gene20006:intron | 60.0% | |
| CAGTAAGGGTCTCTGCCCCA+AGG | + | chr1.4:72513806-72513825 | None:intergenic | 60.0% | |
| CCTCATCTGGAAGGGCTGCA+AGG | - | chr1.4:72514368-72514387 | MS.gene20006:intron | 60.0% | |
| CCTTGCAGCCCTTCCAGATG+AGG | + | chr1.4:72514371-72514390 | None:intergenic | 60.0% | |
| CTGCCGAGCCTGAAATGCAC+CGG | + | chr1.4:72514685-72514704 | None:intergenic | 60.0% | |
| CTTGGGGCAGAGACCCTTAC+TGG | - | chr1.4:72513804-72513823 | MS.gene20006:intron | 60.0% | |
| GCCCGTTGTTGTCACACGTG+TGG | - | chr1.4:72513479-72513498 | MS.gene20006:intron | 60.0% | |
| GCGAACATCTTCAGCGTGCC+GGG | + | chr1.4:72512755-72512774 | None:intergenic | 60.0% | |
| GGCGAACATCTTCAGCGTGC+CGG | + | chr1.4:72512756-72512775 | None:intergenic | 60.0% | |
| GGGAGAGCCTATGAGCCACA+TGG | - | chr1.4:72514177-72514196 | MS.gene20006:intron | 60.0% | |
| GTCGAGGATCCGCCAGCATA+GGG | + | chr1.4:72514731-72514750 | None:intergenic | 60.0% | |
| GTGCAGGCCGAGTCGAATAC+TGG | - | chr1.4:72514849-72514868 | MS.gene20006:intron | 60.0% | |
| TGTCGAGGATCCGCCAGCAT+AGG | + | chr1.4:72514732-72514751 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 72509608 | 72515082 | 72509608 | ID=MS.gene20006 |
| chr1.4 | mRNA | 72509608 | 72515082 | 72509608 | ID=MS.gene20006.t1;Parent=MS.gene20006 |
| chr1.4 | exon | 72515014 | 72515082 | 72515014 | ID=MS.gene20006.t1.exon1;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72515014 | 72515082 | 72515014 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72514098 | 72514194 | 72514098 | ID=MS.gene20006.t1.exon2;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72514098 | 72514194 | 72514098 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72513486 | 72513583 | 72513486 | ID=MS.gene20006.t1.exon3;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72513486 | 72513583 | 72513486 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72513163 | 72513318 | 72513163 | ID=MS.gene20006.t1.exon4;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72513163 | 72513318 | 72513163 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72512962 | 72513039 | 72512962 | ID=MS.gene20006.t1.exon5;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72512962 | 72513039 | 72512962 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72512386 | 72512517 | 72512386 | ID=MS.gene20006.t1.exon6;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72512386 | 72512517 | 72512386 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72511913 | 72511990 | 72511913 | ID=MS.gene20006.t1.exon7;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72511913 | 72511990 | 72511913 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72511664 | 72511735 | 72511664 | ID=MS.gene20006.t1.exon8;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72511664 | 72511735 | 72511664 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72511437 | 72511526 | 72511437 | ID=MS.gene20006.t1.exon9;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72511437 | 72511526 | 72511437 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72511117 | 72511261 | 72511117 | ID=MS.gene20006.t1.exon10;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72511117 | 72511261 | 72511117 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72510815 | 72510903 | 72510815 | ID=MS.gene20006.t1.exon11;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72510815 | 72510903 | 72510815 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72510471 | 72510566 | 72510471 | ID=MS.gene20006.t1.exon12;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72510471 | 72510566 | 72510471 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72510301 | 72510368 | 72510301 | ID=MS.gene20006.t1.exon13;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72510301 | 72510368 | 72510301 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72509935 | 72510094 | 72509935 | ID=MS.gene20006.t1.exon14;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72509935 | 72510094 | 72509935 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| chr1.4 | exon | 72509608 | 72509760 | 72509608 | ID=MS.gene20006.t1.exon15;Parent=MS.gene20006.t1 |
| chr1.4 | CDS | 72509608 | 72509760 | 72509608 | ID=cds.MS.gene20006.t1;Parent=MS.gene20006.t1 |
| Gene Sequence |
| Protein sequence |
