Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050225.t1 | XP_013469353.1 | 99.4 | 470 | 3 | 0 | 1 | 470 | 57 | 526 | 1.70E-264 | 921.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050225.t1 | B8BJ39 | 84.3 | 471 | 73 | 1 | 1 | 470 | 57 | 527 | 4.4e-229 | 795.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050225.t1 | A0A072VP40 | 99.4 | 470 | 3 | 0 | 1 | 470 | 57 | 526 | 1.2e-264 | 921.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050225 | MS.gene053108 | 0.814517 | 1.48E-51 | -1.69E-46 |
| MS.gene050225 | MS.gene056618 | 0.833239 | 5.98E-56 | -1.69E-46 |
| MS.gene050225 | MS.gene070324 | 0.800125 | 1.67E-48 | -1.69E-46 |
| MS.gene050225 | MS.gene072777 | 0.813867 | 2.06E-51 | -1.69E-46 |
| MS.gene050225 | MS.gene20006 | 0.983949 | 3.67E-159 | -1.69E-46 |
| MS.gene050225 | MS.gene27771 | 0.829235 | 5.77E-55 | -1.69E-46 |
| MS.gene050225 | MS.gene40630 | 0.811667 | 6.24E-51 | -1.69E-46 |
| MS.gene050225 | MS.gene45445 | 0.810306 | 1.23E-50 | -1.69E-46 |
| MS.gene050225 | MS.gene57633 | 0.802852 | 4.61E-49 | -1.69E-46 |
| MS.gene050225 | MS.gene59297 | 0.853459 | 2.36E-61 | -1.69E-46 |
| MS.gene050225 | MS.gene65986 | 0.801453 | 8.94E-49 | -1.69E-46 |
| MS.gene050225 | MS.gene71182 | 0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene050225 | MS.gene72164 | 0.822925 | 1.82E-53 | -1.69E-46 |
| MS.gene050225 | MS.gene78325 | 0.805616 | 1.22E-49 | -1.69E-46 |
| MS.gene050225 | MS.gene81828 | 0.833614 | 4.82E-56 | -1.69E-46 |
| MS.gene050225 | MS.gene82422 | 0.814026 | 1.90E-51 | -1.69E-46 |
| MS.gene050225 | MS.gene82768 | 0.852363 | 4.85E-61 | -1.69E-46 |
| MS.gene050225 | MS.gene96101 | 0.816345 | 5.80E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 110 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGACATTGGAAAATTTA+AGG | 0.150763 | 1.1:+66867489 | MS.gene050225:CDS |
| CATTGTCTCTCGTGGAAATT+TGG | 0.157630 | 1.1:+66869544 | MS.gene050225:CDS |
| CTGCTTGAGGTCTTCAAATT+TGG | 0.167564 | 1.1:-66869307 | None:intergenic |
| GACATTCACCGGTGCATTTC+AGG | 0.196130 | 1.1:+66871009 | MS.gene050225:CDS |
| CTGACGAGTCACCAACTTTC+TGG | 0.209286 | 1.1:-66871366 | None:intergenic |
| CTTGGGGCAGAGACCCTTAC+TGG | 0.238060 | 1.1:+66870140 | MS.gene050225:CDS |
| AATGTCTCTTGGTGGTATTC+TGG | 0.238537 | 1.1:-66867476 | None:intergenic |
| ATCGGTAAATATCTGTTTAC+AGG | 0.257297 | 1.1:+66868018 | MS.gene050225:CDS |
| GAAAGGCCGCTAAAATTTAC+TGG | 0.264525 | 1.1:-66867841 | None:intergenic |
| TTAGACCATGGCAAGGCTTT+TGG | 0.295423 | 1.1:+66871310 | MS.gene050225:CDS |
| TTATTCACGACTTGTAATTC+TGG | 0.303358 | 1.1:-66867733 | None:intergenic |
| GTAGCTTCTTTGTTCTGATC+TGG | 0.328901 | 1.1:-66867805 | None:intergenic |
| ATTGTCTCTCGTGGAAATTT+GGG | 0.332252 | 1.1:+66869545 | MS.gene050225:CDS |
| GTGTCTGCTTCAAGGGTAAT+TGG | 0.332260 | 1.1:-66867766 | None:intergenic |
| AGAGACATTGGAAAATTTAA+GGG | 0.372740 | 1.1:+66867490 | MS.gene050225:CDS |
| ATCATCTGCTTCACCTCATC+TGG | 0.394382 | 1.1:+66870691 | MS.gene050225:CDS |
| GTGCAGGCCGAATCGAATAC+TGG | 0.397044 | 1.1:+66871259 | MS.gene050225:intron |
| ACCACACGTGTGACAACAAC+GGG | 0.403478 | 1.1:-66869816 | None:intergenic |
| TCGAGCAGCCGTCAAGGTTA+AGG | 0.409040 | 1.1:+66870660 | MS.gene050225:CDS |
| ATTGATTCCATGTGGCTCAT+AGG | 0.420729 | 1.1:-66870520 | None:intergenic |
| AAGTAGATACCGACCTTCTC+AGG | 0.423206 | 1.1:-66869581 | None:intergenic |
| GCAGTGATGCAATTCTCCTT+GGG | 0.424846 | 1.1:+66870123 | MS.gene050225:CDS |
| TTGCACGGTTTGACTTCTCA+TGG | 0.446494 | 1.1:+66867447 | MS.gene050225:CDS |
| CAAGTGATGTGTCTGCTTCA+AGG | 0.449834 | 1.1:-66867774 | None:intergenic |
| GGCAGTGATGCAATTCTCCT+TGG | 0.450255 | 1.1:+66870122 | MS.gene050225:intron |
| ACTGTAGAAATGGTTTCTAC+AGG | 0.450667 | 1.1:-66870170 | None:intergenic |
| AGTTGATTTGTCTTCAATTG+AGG | 0.452233 | 1.1:-66870980 | None:intergenic |
| TAAGAAGACTGTCAAATATG+TGG | 0.458797 | 1.1:+66870492 | MS.gene050225:CDS |
| GGCGAACATCTTCAGCGTGC+CGG | 0.459359 | 1.1:-66869089 | None:intergenic |
| AATAGTATCACCCTTCTTCA+CGG | 0.459621 | 1.1:-66867992 | None:intergenic |
| ATCAAATGAATCAATCTTGA+AGG | 0.460016 | 1.1:+66871282 | MS.gene050225:CDS |
| GATTATGCAGGCCGTGAAGA+AGG | 0.462451 | 1.1:+66867981 | MS.gene050225:intron |
| CGATGTTGCCAATGCAGTAT+TGG | 0.462920 | 1.1:+66869884 | MS.gene050225:CDS |
| GCGAACATCTTCAGCGTGCC+GGG | 0.463044 | 1.1:-66869088 | None:intergenic |
| GTAGAAACCATTTCTACAGT+TGG | 0.470386 | 1.1:+66870173 | MS.gene050225:CDS |
| TCTTCCTACTCTTACTGATA+AGG | 0.470694 | 1.1:+66868615 | MS.gene050225:CDS |
| TGTCTGCTTCAAGGGTAATT+GGG | 0.470997 | 1.1:-66867765 | None:intergenic |
| TGCACGGTTTGACTTCTCAT+GGG | 0.475448 | 1.1:+66867448 | MS.gene050225:CDS |
| ATTTGATCCAGTATTCGATT+CGG | 0.478935 | 1.1:-66871266 | None:intergenic |
| AACAGAAGCCTTAACCTTGA+CGG | 0.484642 | 1.1:-66870668 | None:intergenic |
| AAATTTGGAGATATATTCAC+GGG | 0.502345 | 1.1:-66869292 | None:intergenic |
| AAGTGATGTGTCTGCTTCAA+GGG | 0.505911 | 1.1:-66867773 | None:intergenic |
| TCACCGGTGCATTTCAGGCT+CGG | 0.507269 | 1.1:+66871014 | MS.gene050225:CDS |
| TGTCGAGGATCCGCCAGCAT+AGG | 0.508898 | 1.1:-66871064 | None:intergenic |
| GAAGTGAAACAACTTCTGTA+TGG | 0.510806 | 1.1:+66868040 | MS.gene050225:CDS |
| GTCGAGGATCCGCCAGCATA+GGG | 0.522821 | 1.1:-66871063 | None:intergenic |
| TCTTACTGATAAGGATAAAG+AGG | 0.526803 | 1.1:+66868624 | MS.gene050225:CDS |
| AAGAAGACTGTCAAATATGT+GGG | 0.528997 | 1.1:+66870493 | MS.gene050225:CDS |
| CTACAGGGTATAATCCAGTA+AGG | 0.529033 | 1.1:-66870154 | None:intergenic |
| CTGCTTCACCTCATCTGGAA+GGG | 0.535094 | 1.1:+66870696 | MS.gene050225:CDS |
| ATTTATAAGTGTAACATGGC+GGG | 0.535820 | 1.1:+66869789 | MS.gene050225:CDS |
| CAAATTTGGAGATATATTCA+CGG | 0.536091 | 1.1:-66869293 | None:intergenic |
| CCTCATCTGGAAGGGCTGCA+AGG | 0.541301 | 1.1:+66870704 | MS.gene050225:CDS |
| ATTACCATCCAATACTGCAT+TGG | 0.545679 | 1.1:-66869892 | None:intergenic |
| AGAATACCACCAAGAGACAT+TGG | 0.551827 | 1.1:+66867478 | MS.gene050225:CDS |
| TTGAAGGTTGCTTTAGACCA+TGG | 0.555702 | 1.1:+66871298 | MS.gene050225:CDS |
| TGCAAAGATCGAAAATGTAG+AGG | 0.564673 | 1.1:+66869341 | MS.gene050225:CDS |
| ATCATTCTTACAGGGTGTCG+AGG | 0.564881 | 1.1:-66871079 | None:intergenic |
| TCTGCTTCACCTCATCTGGA+AGG | 0.565181 | 1.1:+66870695 | MS.gene050225:CDS |
| ACAGATATCACAGGCATGGT+TGG | 0.565703 | 1.1:-66870950 | None:intergenic |
| CTGTAGAAATGGTTTCTACA+GGG | 0.567154 | 1.1:-66870169 | None:intergenic |
| ATTATGCAGGCCGTGAAGAA+GGG | 0.567518 | 1.1:+66867982 | MS.gene050225:intron |
| ATACAGGTCAGCGAGGTGAA+TGG | 0.567535 | 1.1:+66868508 | MS.gene050225:intron |
| GATGGTATCATTGTCTCTCG+TGG | 0.568066 | 1.1:+66869536 | MS.gene050225:CDS |
| AACTTAGGTAATACGCACAT+GGG | 0.571273 | 1.1:+66869029 | MS.gene050225:intron |
| CAACTCCGATGGACATTCAC+CGG | 0.575309 | 1.1:+66870998 | MS.gene050225:CDS |
| GTTGTTGTTTGCCAGAAAGT+TGG | 0.576382 | 1.1:+66871355 | MS.gene050225:CDS |
| GATAGATCTCCCACCTGAGA+AGG | 0.576840 | 1.1:+66869568 | MS.gene050225:CDS |
| TGAAGACAAATCAACTCCGA+TGG | 0.584693 | 1.1:+66870987 | MS.gene050225:CDS |
| CCTTGCAGCCCTTCCAGATG+AGG | 0.586363 | 1.1:-66870704 | None:intergenic |
| TTATCCTTATCAGTAAGAGT+AGG | 0.591542 | 1.1:-66868619 | None:intergenic |
| TGATGCCAAAAGCCTTGCCA+TGG | 0.594137 | 1.1:-66871315 | None:intergenic |
| CTTACCATATGCCAGTTGCA+CGG | 0.596871 | 1.1:+66867432 | None:intergenic |
| CAATACTGCATTGGCAACAT+CGG | 0.597566 | 1.1:-66869883 | None:intergenic |
| CGGCAGTCACTTATTGTGAG+AGG | 0.598163 | 1.1:+66871034 | MS.gene050225:CDS |
| ACAGGTTCGAGCAGCCGTCA+AGG | 0.598249 | 1.1:+66870654 | MS.gene050225:intron |
| CTTTCTGGCAAACAACAACT+CGG | 0.599279 | 1.1:-66871351 | None:intergenic |
| GCACGGTTTGACTTCTCATG+GGG | 0.608536 | 1.1:+66867449 | MS.gene050225:CDS |
| AAGGTAGACTGACCTTTGAA+AGG | 0.609390 | 1.1:-66867858 | None:intergenic |
| GAGATATTGAGAGAAGCAGA+TGG | 0.612258 | 1.1:+66869518 | MS.gene050225:CDS |
| TTGTCTCTCGTGGAAATTTG+GGG | 0.612945 | 1.1:+66869546 | MS.gene050225:CDS |
| ATGCACCGGTGAATGTCCAT+CGG | 0.620402 | 1.1:-66871003 | None:intergenic |
| CTGCCGAGCCTGAAATGCAC+CGG | 0.620410 | 1.1:-66871017 | None:intergenic |
| GGTTGCTTTAGACCATGGCA+AGG | 0.624133 | 1.1:+66871303 | MS.gene050225:CDS |
| TAGATACCGACCTTCTCAGG+TGG | 0.626269 | 1.1:-66869578 | None:intergenic |
| ACTTAGGTAATACGCACATG+GGG | 0.626722 | 1.1:+66869030 | MS.gene050225:intron |
| GCCCGTTGTTGTCACACGTG+TGG | 0.628308 | 1.1:+66869815 | MS.gene050225:CDS |
| TAACTTAGGTAATACGCACA+TGG | 0.628609 | 1.1:+66869028 | MS.gene050225:intron |
| GACGACAGATATCACAGGCA+TGG | 0.630625 | 1.1:-66870954 | None:intergenic |
| CAGGTTATGCTAGATACTGT+AGG | 0.633111 | 1.1:+66867709 | MS.gene050225:intron |
| CAGTAAGGGTCTCTGCCCCA+AGG | 0.637264 | 1.1:-66870139 | None:intergenic |
| TACAGGGTATAATCCAGTAA+GGG | 0.637369 | 1.1:-66870153 | None:intergenic |
| GACCACACGTGTGACAACAA+CGG | 0.637756 | 1.1:-66869817 | None:intergenic |
| TCGGTTGCTTCAGCACGAGT+AGG | 0.643981 | 1.1:-66869864 | None:intergenic |
| AACAACTTCTGTATGGCTAG+AGG | 0.646199 | 1.1:+66868047 | MS.gene050225:CDS |
| TAATGAGAAATGTACTGCAG+AGG | 0.647825 | 1.1:-66870548 | None:intergenic |
| AGATACCGACCTTCTCAGGT+GGG | 0.649922 | 1.1:-66869577 | None:intergenic |
| CAAACAACAACTCGGTCATG+TGG | 0.652383 | 1.1:-66871343 | None:intergenic |
| CAGTGATGCAATTCTCCTTG+GGG | 0.653565 | 1.1:+66870124 | MS.gene050225:CDS |
| ACTTCCTCTCATTATACACC+CGG | 0.654885 | 1.1:+66869070 | MS.gene050225:CDS |
| GGGAGAGCCTATGAGCCACA+TGG | 0.657231 | 1.1:+66870513 | MS.gene050225:CDS |
| TGCTATTTATAAGTGTAACA+TGG | 0.661564 | 1.1:+66869785 | MS.gene050225:CDS |
| CGTGCCGGGTGTATAATGAG+AGG | 0.669231 | 1.1:-66869074 | None:intergenic |
| GTTGCCAATGCAGTATTGGA+TGG | 0.678151 | 1.1:+66869888 | MS.gene050225:CDS |
| TATTTATAAGTGTAACATGG+CGG | 0.681522 | 1.1:+66869788 | MS.gene050225:CDS |
| CTTAGGTAATACGCACATGG+GGG | 0.693230 | 1.1:+66869031 | MS.gene050225:intron |
| TTAGGTAATACGCACATGGG+GGG | 0.704480 | 1.1:+66869032 | MS.gene050225:intron |
| GGAATGACGACAGATATCAC+AGG | 0.710120 | 1.1:-66870959 | None:intergenic |
| AGGAAGCTATTGATTCCATG+TGG | 0.726968 | 1.1:-66870528 | None:intergenic |
| TTTCACAATACAGGTCAGCG+AGG | 0.765838 | 1.1:+66868501 | MS.gene050225:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATACAAATAAACAAAA+TGG | - | chr1.1:66869640-66869659 | None:intergenic | 10.0% |
| !!! | GAAAATAGATTTTTTTTTTT+TGG | + | chr1.1:66868811-66868830 | MS.gene050225:intron | 10.0% |
| !!! | TTTATTTTTTTATGTTATGT+AGG | + | chr1.1:66870909-66870928 | MS.gene050225:intron | 10.0% |
| !! | AATTCAGTTATAACTTATAA+GGG | + | chr1.1:66868188-66868207 | MS.gene050225:intron | 15.0% |
| !! | AGTATGCAATAATAATAAAA+TGG | - | chr1.1:66868970-66868989 | None:intergenic | 15.0% |
| !! | ATATTAATAAAGAAGTCTAA+TGG | - | chr1.1:66868257-66868276 | None:intergenic | 15.0% |
| !! | ATATTTGTAGTTAGATTTAT+AGG | + | chr1.1:66868383-66868402 | MS.gene050225:intron | 15.0% |
| !! | TAATTCAGTTATAACTTATA+AGG | + | chr1.1:66868187-66868206 | MS.gene050225:intron | 15.0% |
| !!! | AATTTTTTGTCTTTTATATC+AGG | + | chr1.1:66870101-66870120 | MS.gene050225:intron | 15.0% |
| !!! | ATGATTTTATCATTACATTA+TGG | + | chr1.1:66870381-66870400 | MS.gene050225:intron | 15.0% |
| !! | AAATACTGAAAAAAAGAAGA+AGG | - | chr1.1:66870802-66870821 | None:intergenic | 20.0% |
| !! | AAATTCATACATACATATTC+AGG | - | chr1.1:66869740-66869759 | None:intergenic | 20.0% |
| !! | ACAAATATAAGAAGGAAATT+TGG | - | chr1.1:66868371-66868390 | None:intergenic | 20.0% |
| !! | ATCTAACTACAAATATAAGA+AGG | - | chr1.1:66868379-66868398 | None:intergenic | 20.0% |
| !! | TAACAAATGTAAAACTGATT+TGG | + | chr1.1:66868909-66868928 | MS.gene050225:intron | 20.0% |
| !! | TACATTTAATCATTCTTACA+GGG | - | chr1.1:66871090-66871109 | None:intergenic | 20.0% |
| !! | TTACATTTAATCATTCTTAC+AGG | - | chr1.1:66871091-66871110 | None:intergenic | 20.0% |
| !!! | ATATAGTGTTGTTATATATG+GGG | + | chr1.1:66871115-66871134 | MS.gene050225:intron | 20.0% |
| !!! | ATGAGAAGTCTTTTTAATAA+AGG | - | chr1.1:66870745-66870764 | None:intergenic | 20.0% |
| !!! | ATTTGTATTTTTTAGTGTCA+CGG | + | chr1.1:66869648-66869667 | MS.gene050225:intron | 20.0% |
| !!! | ATTTTCTCCAAGTTATTTTT+TGG | + | chr1.1:66868331-66868350 | MS.gene050225:intron | 20.0% |
| !!! | CATATAGTGTTGTTATATAT+GGG | + | chr1.1:66871114-66871133 | MS.gene050225:intron | 20.0% |
| !!! | TATTTATTTAGTTCCACATT+CGG | + | chr1.1:66870817-66870836 | MS.gene050225:intron | 20.0% |
| !!! | TCATATAGTGTTGTTATATA+TGG | + | chr1.1:66871113-66871132 | MS.gene050225:intron | 20.0% |
| !!! | TCTTCTCTAAAATTCATATA+GGG | + | chr1.1:66869479-66869498 | MS.gene050225:intron | 20.0% |
| !!! | TGAGAAGTCTTTTTAATAAA+GGG | - | chr1.1:66870744-66870763 | None:intergenic | 20.0% |
| !!! | TTCTTCTCTAAAATTCATAT+AGG | + | chr1.1:66869478-66869497 | MS.gene050225:intron | 20.0% |
| ! | AAAATGACTTATCTTTCTGT+TGG | + | chr1.1:66868776-66868795 | MS.gene050225:intron | 25.0% |
| ! | AAATTTGGAGATATATTCAC+GGG | - | chr1.1:66869295-66869314 | None:intergenic | 25.0% |
| ! | AACGATATTAAAACCTCAAT+CGG | + | chr1.1:66871152-66871171 | MS.gene050225:intron | 25.0% |
| ! | AAGAGACATTGGAAAATTTA+AGG | + | chr1.1:66867489-66867508 | MS.gene050225:CDS | 25.0% |
| ! | ACAAAAAAGAACTTAGATGA+GGG | - | chr1.1:66869925-66869944 | None:intergenic | 25.0% |
| ! | AGAGACATTGGAAAATTTAA+GGG | + | chr1.1:66867490-66867509 | MS.gene050225:CDS | 25.0% |
| ! | ATAGGATCCAAAAAATAACT+TGG | - | chr1.1:66868341-66868360 | None:intergenic | 25.0% |
| ! | ATCAAATGAATCAATCTTGA+AGG | + | chr1.1:66871282-66871301 | MS.gene050225:CDS | 25.0% |
| ! | CAAATTTGGAGATATATTCA+CGG | - | chr1.1:66869296-66869315 | None:intergenic | 25.0% |
| ! | GACATACTATTAAATGATTG+TGG | + | chr1.1:66867587-66867606 | MS.gene050225:intron | 25.0% |
| ! | GTACACTTACATTTAATCTT+TGG | - | chr1.1:66868842-66868861 | None:intergenic | 25.0% |
| ! | TATGTATGTATGAATTTGAC+AGG | + | chr1.1:66869743-66869762 | MS.gene050225:intron | 25.0% |
| ! | TATTTATAAGTGTAACATGG+CGG | + | chr1.1:66869788-66869807 | MS.gene050225:CDS | 25.0% |
| ! | TTAGTGAGTAAAATGTCAAA+AGG | - | chr1.1:66869011-66869030 | None:intergenic | 25.0% |
| ! | TTTATGATTGTGCTTAATTG+TGG | + | chr1.1:66869440-66869459 | MS.gene050225:intron | 25.0% |
| !! | AATAAACAAAATGGAAGCAT+AGG | - | chr1.1:66869631-66869650 | None:intergenic | 25.0% |
| !! | AATTTTTCCAACTGTAGAAA+TGG | - | chr1.1:66870183-66870202 | None:intergenic | 25.0% |
| !! | ACTTATAAATAGCAGCTTTT+TGG | - | chr1.1:66869779-66869798 | None:intergenic | 25.0% |
| !! | ATTCGATTTTGTTGCAATTT+TGG | + | chr1.1:66870853-66870872 | MS.gene050225:intron | 25.0% |
| !! | CTATTACCAGTAAATTTTAG+CGG | + | chr1.1:66867835-66867854 | MS.gene050225:CDS | 25.0% |
| !! | GCATTGTTTATGTTTTCTAA+TGG | - | chr1.1:66869252-66869271 | None:intergenic | 25.0% |
| !! | GTAACAATATACATGCATTT+TGG | + | chr1.1:66867678-66867697 | MS.gene050225:intron | 25.0% |
| !! | TGCTATTTATAAGTGTAACA+TGG | + | chr1.1:66869785-66869804 | MS.gene050225:CDS | 25.0% |
| !! | TTAAATTTTCCAATGTCTCT+TGG | - | chr1.1:66867490-66867509 | None:intergenic | 25.0% |
| !!! | AAGGGTGATACTATTTTTAT+CGG | + | chr1.1:66868000-66868019 | MS.gene050225:CDS | 25.0% |
| !!! | TAATTTGTTCAGATATTCTG+TGG | + | chr1.1:66870335-66870354 | MS.gene050225:intron | 25.0% |
| !!! | TGATTGTGGTTTTAATACAT+TGG | + | chr1.1:66867601-66867620 | MS.gene050225:intron | 25.0% |
| !!! | TTTTAATTGCGAAAAGTAGT+AGG | - | chr1.1:66870247-66870266 | None:intergenic | 25.0% |
| AAAAAAGAACTTAGATGAGG+GGG | - | chr1.1:66869923-66869942 | None:intergenic | 30.0% | |
| AACTATTTACACAATTGACG+AGG | + | chr1.1:66868862-66868881 | MS.gene050225:intron | 30.0% | |
| AAGAAGACTGTCAAATATGT+GGG | + | chr1.1:66870493-66870512 | MS.gene050225:CDS | 30.0% | |
| AAGCAGAAAGTCTATTGTTT+AGG | - | chr1.1:66869384-66869403 | None:intergenic | 30.0% | |
| ACGATATTAAAACCTCAATC+GGG | + | chr1.1:66871153-66871172 | MS.gene050225:intron | 30.0% | |
| AGCAGAAAGTCTATTGTTTA+GGG | - | chr1.1:66869383-66869402 | None:intergenic | 30.0% | |
| AGGAAATTTGGTAGACTTAT+AGG | - | chr1.1:66868359-66868378 | None:intergenic | 30.0% | |
| ATCATGGATACCTTAGTTAA+AGG | - | chr1.1:66867964-66867983 | None:intergenic | 30.0% | |
| ATCGGTAAATATCTGTTTAC+AGG | + | chr1.1:66868018-66868037 | MS.gene050225:CDS | 30.0% | |
| ATTCTATTCACTTGCTCAAA+GGG | + | chr1.1:66870576-66870595 | MS.gene050225:intron | 30.0% | |
| ATTTATAAGTGTAACATGGC+GGG | + | chr1.1:66869789-66869808 | MS.gene050225:CDS | 30.0% | |
| ATTTGATCCAGTATTCGATT+CGG | - | chr1.1:66871269-66871288 | None:intergenic | 30.0% | |
| CAAAAAAGAACTTAGATGAG+GGG | - | chr1.1:66869924-66869943 | None:intergenic | 30.0% | |
| CAGACATAGTTCAATCTTTA+AGG | + | chr1.1:66868075-66868094 | MS.gene050225:intron | 30.0% | |
| CATTGTAGTACACATTATCA+TGG | - | chr1.1:66867932-66867951 | None:intergenic | 30.0% | |
| CTTGTTAAGTAGAAAGACTA+AGG | - | chr1.1:66868287-66868306 | None:intergenic | 30.0% | |
| GACAAAAAAGAACTTAGATG+AGG | - | chr1.1:66869926-66869945 | None:intergenic | 30.0% | |
| GTAGTGAAATTGACATAATG+TGG | + | chr1.1:66868673-66868692 | MS.gene050225:intron | 30.0% | |
| GTATGACAAGAATACAAAAG+AGG | - | chr1.1:66870315-66870334 | None:intergenic | 30.0% | |
| GTGATTATCTCCTTTAACTA+AGG | + | chr1.1:66867951-66867970 | MS.gene050225:intron | 30.0% | |
| GTTATAACTGAATTACCCTA+AGG | - | chr1.1:66868182-66868201 | None:intergenic | 30.0% | |
| TAAACATGTGATCCAACAAA+TGG | - | chr1.1:66867887-66867906 | None:intergenic | 30.0% | |
| TAAGAAGACTGTCAAATATG+TGG | + | chr1.1:66870492-66870511 | MS.gene050225:CDS | 30.0% | |
| TACCATTCGTGATTGTATAA+TGG | - | chr1.1:66868939-66868958 | None:intergenic | 30.0% | |
| TATTCTATTCACTTGCTCAA+AGG | + | chr1.1:66870575-66870594 | MS.gene050225:intron | 30.0% | |
| TCTTACTGATAAGGATAAAG+AGG | + | chr1.1:66868624-66868643 | MS.gene050225:CDS | 30.0% | |
| TGCACGTATGGAAAATAAAT+AGG | - | chr1.1:66867634-66867653 | None:intergenic | 30.0% | |
| TTATCCTTATCAGTAAGAGT+AGG | - | chr1.1:66868622-66868641 | None:intergenic | 30.0% | |
| TTATTCACGACTTGTAATTC+TGG | - | chr1.1:66867736-66867755 | None:intergenic | 30.0% | |
| TTTGTCGTATTTGAATAGTC+CGG | + | chr1.1:66869940-66869959 | MS.gene050225:intron | 30.0% | |
| ! | CATGGCTAATATGAAAGTAT+TGG | - | chr1.1:66867914-66867933 | None:intergenic | 30.0% |
| ! | GACATTTTACTCACTAACTT+AGG | + | chr1.1:66869014-66869033 | MS.gene050225:intron | 30.0% |
| ! | TAACATCAGATTTTTCTGAC+CGG | - | chr1.1:66869607-66869626 | None:intergenic | 30.0% |
| ! | TTCTTTTTCCTGAAACATAC+AGG | + | chr1.1:66870636-66870655 | MS.gene050225:intron | 30.0% |
| ! | TTTCTGTTGGTCTGTAAATA+TGG | + | chr1.1:66868789-66868808 | MS.gene050225:intron | 30.0% |
| ! | TTTTGTACTCTAAGTGTAAG+TGG | + | chr1.1:66868472-66868491 | MS.gene050225:intron | 30.0% |
| !! | AGTTGATTTGTCTTCAATTG+AGG | - | chr1.1:66870983-66871002 | None:intergenic | 30.0% |
| !! | TAGGAAGCATTATATGAAAC+AGG | + | chr1.1:66868402-66868421 | MS.gene050225:intron | 30.0% |
| !! | TAGTAGGAAGTGTTGTTTAA+AGG | - | chr1.1:66870231-66870250 | None:intergenic | 30.0% |
| !!! | ATGCATTTTGGTTCAATTAC+AGG | + | chr1.1:66867690-66867709 | MS.gene050225:intron | 30.0% |
| AACTTAGGTAATACGCACAT+GGG | + | chr1.1:66869029-66869048 | MS.gene050225:intron | 35.0% | |
| AATAGTATCACCCTTCTTCA+CGG | - | chr1.1:66867995-66868014 | None:intergenic | 35.0% | |
| ACTGTAGAAATGGTTTCTAC+AGG | - | chr1.1:66870173-66870192 | None:intergenic | 35.0% | |
| ATAACTGAATTACCCTAAGG+AGG | - | chr1.1:66868179-66868198 | None:intergenic | 35.0% | |
| ATTACCATCCAATACTGCAT+TGG | - | chr1.1:66869895-66869914 | None:intergenic | 35.0% | |
| ATTGTCTCTCGTGGAAATTT+GGG | + | chr1.1:66869545-66869564 | MS.gene050225:CDS | 35.0% | |
| ATTTGATCCAGTATTCGACT+CGG | - | chr1.1:66871194-66871213 | None:intergenic | 35.0% | |
| CAAAAATATGTGTCTGCTTG+AGG | - | chr1.1:66869323-66869342 | None:intergenic | 35.0% | |
| CTGTAGAAATGGTTTCTACA+GGG | - | chr1.1:66870172-66870191 | None:intergenic | 35.0% | |
| GAAGTGAAACAACTTCTGTA+TGG | + | chr1.1:66868040-66868059 | MS.gene050225:CDS | 35.0% | |
| GACCATTATACAATCACGAA+TGG | + | chr1.1:66868934-66868953 | MS.gene050225:intron | 35.0% | |
| GTAGAAACCATTTCTACAGT+TGG | + | chr1.1:66870173-66870192 | MS.gene050225:CDS | 35.0% | |
| GTGATCCAACAAATGGAAAA+AGG | - | chr1.1:66867880-66867899 | None:intergenic | 35.0% | |
| TAACTTAGGTAATACGCACA+TGG | + | chr1.1:66869028-66869047 | MS.gene050225:intron | 35.0% | |
| TAATGAGAAATGTACTGCAG+AGG | - | chr1.1:66870551-66870570 | None:intergenic | 35.0% | |
| TACACTAATTACCCTTCAGA+AGG | - | chr1.1:66867661-66867680 | None:intergenic | 35.0% | |
| TACAGGGTATAATCCAGTAA+GGG | - | chr1.1:66870156-66870175 | None:intergenic | 35.0% | |
| TCAAACGTATACTAGAGAGA+CGG | - | chr1.1:66869710-66869729 | None:intergenic | 35.0% | |
| TCCGGTATGATCTAAGTTAT+GGG | + | chr1.1:66869958-66869977 | MS.gene050225:intron | 35.0% | |
| TCTTCCTACTCTTACTGATA+AGG | + | chr1.1:66868615-66868634 | MS.gene050225:CDS | 35.0% | |
| TGCAAAGATCGAAAATGTAG+AGG | + | chr1.1:66869341-66869360 | MS.gene050225:CDS | 35.0% | |
| TGGTATCTGTTTCACAATAC+AGG | + | chr1.1:66868492-66868511 | MS.gene050225:intron | 35.0% | |
| ! | AATTTTCCAATGTCTCTTGG+TGG | - | chr1.1:66867487-66867506 | None:intergenic | 35.0% |
| ! | ACTTTTCTTTGACCTCCTTA+GGG | + | chr1.1:66868164-66868183 | MS.gene050225:intron | 35.0% |
| ! | AGTGTTGTTATATATGGGGA+AGG | + | chr1.1:66871119-66871138 | MS.gene050225:intron | 35.0% |
| ! | GTCTACCTTTTTCCATTTGT+TGG | + | chr1.1:66867872-66867891 | MS.gene050225:intron | 35.0% |
| ! | GTGTTGTTATATATGGGGAA+GGG | + | chr1.1:66871120-66871139 | MS.gene050225:intron | 35.0% |
| ! | GTTTATGTTTTCTAATGGCG+AGG | - | chr1.1:66869247-66869266 | None:intergenic | 35.0% |
| ! | TAAGGTATCCATGATTATGC+AGG | + | chr1.1:66867969-66867988 | MS.gene050225:intron | 35.0% |
| ! | TACTTTTCTTTGACCTCCTT+AGG | + | chr1.1:66868163-66868182 | MS.gene050225:intron | 35.0% |
| ! | TGTCACTTGTTAGTTATCTG+CGG | + | chr1.1:66870283-66870302 | MS.gene050225:intron | 35.0% |
| !! | AAATTTTAGCGGCCTTTCAA+AGG | + | chr1.1:66867846-66867865 | MS.gene050225:CDS | 35.0% |
| !! | ATTTTGGTATCTTGCTGACA+TGG | + | chr1.1:66870869-66870888 | MS.gene050225:intron | 35.0% |
| !! | GAGGTTTTAATATCGTTCCT+TGG | - | chr1.1:66871149-66871168 | None:intergenic | 35.0% |
| AAAAACGATGCGACACTTTC+TGG | + | chr1.1:66868553-66868572 | MS.gene050225:CDS | 40.0% | |
| AACAACTTCTGTATGGCTAG+AGG | + | chr1.1:66868047-66868066 | MS.gene050225:CDS | 40.0% | |
| AACAGAAGCCTTAACCTTGA+CGG | - | chr1.1:66870671-66870690 | None:intergenic | 40.0% | |
| AAGCACAAAAAAACTCTGCG+CGG | + | chr1.1:66867523-66867542 | MS.gene050225:CDS | 40.0% | |
| AAGGTAGACTGACCTTTGAA+AGG | - | chr1.1:66867861-66867880 | None:intergenic | 40.0% | |
| AAGTGATGTGTCTGCTTCAA+GGG | - | chr1.1:66867776-66867795 | None:intergenic | 40.0% | |
| ACGTGCAAATACCTTCTGAA+GGG | + | chr1.1:66867647-66867666 | MS.gene050225:intron | 40.0% | |
| ACTTAGGTAATACGCACATG+GGG | + | chr1.1:66869030-66869049 | MS.gene050225:intron | 40.0% | |
| ACTTCCTCTCATTATACACC+CGG | + | chr1.1:66869070-66869089 | MS.gene050225:CDS | 40.0% | |
| AGAATACCACCAAGAGACAT+TGG | + | chr1.1:66867478-66867497 | MS.gene050225:CDS | 40.0% | |
| ATGACTGTCATATCCGAATG+TGG | - | chr1.1:66870833-66870852 | None:intergenic | 40.0% | |
| ATTATTCTACTGCACTGTCC+AGG | + | chr1.1:66870438-66870457 | MS.gene050225:intron | 40.0% | |
| CAGGTTATGCTAGATACTGT+AGG | + | chr1.1:66867709-66867728 | MS.gene050225:intron | 40.0% | |
| CATTGATGTAATCAAGCTGC+AGG | - | chr1.1:66868731-66868750 | None:intergenic | 40.0% | |
| CATTGTCTCTCGTGGAAATT+TGG | + | chr1.1:66869544-66869563 | MS.gene050225:CDS | 40.0% | |
| CCCCATAACTTAGATCATAC+CGG | - | chr1.1:66869962-66869981 | None:intergenic | 40.0% | |
| CCGGTATGATCTAAGTTATG+GGG | + | chr1.1:66869959-66869978 | MS.gene050225:intron | 40.0% | |
| CTACAGGGTATAATCCAGTA+AGG | - | chr1.1:66870157-66870176 | None:intergenic | 40.0% | |
| CTGCTTGAGGTCTTCAAATT+TGG | - | chr1.1:66869310-66869329 | None:intergenic | 40.0% | |
| GAAAGGCCGCTAAAATTTAC+TGG | - | chr1.1:66867844-66867863 | None:intergenic | 40.0% | |
| GAGAGAACATAAAACGTAGC+AGG | - | chr1.1:66869129-66869148 | None:intergenic | 40.0% | |
| GAGATATTGAGAGAAGCAGA+TGG | + | chr1.1:66869518-66869537 | MS.gene050225:CDS | 40.0% | |
| GATTGTAAACTTTCTCTGCC+TGG | - | chr1.1:66870459-66870478 | None:intergenic | 40.0% | |
| GCAGATAACTAACAAGTGAC+AGG | - | chr1.1:66870284-66870303 | None:intergenic | 40.0% | |
| GTAGCTTCTTTGTTCTGATC+TGG | - | chr1.1:66867808-66867827 | None:intergenic | 40.0% | |
| GTCCGGTATGATCTAAGTTA+TGG | + | chr1.1:66869957-66869976 | MS.gene050225:intron | 40.0% | |
| TACGTGCAAATACCTTCTGA+AGG | + | chr1.1:66867646-66867665 | MS.gene050225:intron | 40.0% | |
| TAGCAGGTATATCCCTTACA+TGG | - | chr1.1:66869113-66869132 | None:intergenic | 40.0% | |
| TGAAGACAAATCAACTCCGA+TGG | + | chr1.1:66870987-66871006 | MS.gene050225:CDS | 40.0% | |
| TGAAGATGTTCGCCATGTAA+GGG | + | chr1.1:66869098-66869117 | MS.gene050225:intron | 40.0% | |
| TGTCTGCTTCAAGGGTAATT+GGG | - | chr1.1:66867768-66867787 | None:intergenic | 40.0% | |
| TGTGAACTACAGCATTTGTC+TGG | - | chr1.1:66869416-66869435 | None:intergenic | 40.0% | |
| TTGTCTCTCGTGGAAATTTG+GGG | + | chr1.1:66869546-66869565 | MS.gene050225:CDS | 40.0% | |
| ! | AATGTCTCTTGGTGGTATTC+TGG | - | chr1.1:66867479-66867498 | None:intergenic | 40.0% |
| ! | ATTGATTCCATGTGGCTCAT+AGG | - | chr1.1:66870523-66870542 | None:intergenic | 40.0% |
| ! | CAATACTGCATTGGCAACAT+CGG | - | chr1.1:66869886-66869905 | None:intergenic | 40.0% |
| ! | CTTTCTGGCAAACAACAACT+CGG | - | chr1.1:66871354-66871373 | None:intergenic | 40.0% |
| ! | TTGAAGGTTGCTTTAGACCA+TGG | + | chr1.1:66871298-66871317 | MS.gene050225:CDS | 40.0% |
| !! | AGGAAGCTATTGATTCCATG+TGG | - | chr1.1:66870531-66870550 | None:intergenic | 40.0% |
| !! | GTTGTTGTTTGCCAGAAAGT+TGG | + | chr1.1:66871355-66871374 | MS.gene050225:CDS | 40.0% |
| !! | TCAGAAGGTATTTGCACGTA+TGG | - | chr1.1:66867646-66867665 | None:intergenic | 40.0% |
| !!! | GAATTTGCCTTTTTTCGTGC+AGG | + | chr1.1:66871243-66871262 | MS.gene050225:intron | 40.0% |
| AACGTATACTAGAGAGACGG+AGG | - | chr1.1:66869707-66869726 | None:intergenic | 45.0% | |
| AAGTAGATACCGACCTTCTC+AGG | - | chr1.1:66869584-66869603 | None:intergenic | 45.0% | |
| ACAGATATCACAGGCATGGT+TGG | - | chr1.1:66870953-66870972 | None:intergenic | 45.0% | |
| ACGGGCCTGCAAATGAAAAT+CGG | - | chr1.1:66869277-66869296 | None:intergenic | 45.0% | |
| AGAAGGTCGGTATCTACTTC+CGG | + | chr1.1:66869585-66869604 | MS.gene050225:intron | 45.0% | |
| AGACGGAGGAATGCTGTAAA+AGG | - | chr1.1:66869693-66869712 | None:intergenic | 45.0% | |
| ATCATCTGCTTCACCTCATC+TGG | + | chr1.1:66870691-66870710 | MS.gene050225:CDS | 45.0% | |
| ATTATGCAGGCCGTGAAGAA+GGG | + | chr1.1:66867982-66868001 | MS.gene050225:intron | 45.0% | |
| CAAACAACAACTCGGTCATG+TGG | - | chr1.1:66871346-66871365 | None:intergenic | 45.0% | |
| CAAGTGATGTGTCTGCTTCA+AGG | - | chr1.1:66867777-66867796 | None:intergenic | 45.0% | |
| CAGTGATGCAATTCTCCTTG+GGG | + | chr1.1:66870124-66870143 | MS.gene050225:CDS | 45.0% | |
| CGATGTTGCCAATGCAGTAT+TGG | + | chr1.1:66869884-66869903 | MS.gene050225:CDS | 45.0% | |
| CTAACAAGTGACAGGATCAC+AGG | - | chr1.1:66870276-66870295 | None:intergenic | 45.0% | |
| CTGAAGATGTTCGCCATGTA+AGG | + | chr1.1:66869097-66869116 | MS.gene050225:intron | 45.0% | |
| CTTAGGTAATACGCACATGG+GGG | + | chr1.1:66869031-66869050 | MS.gene050225:intron | 45.0% | |
| GATGGTATCATTGTCTCTCG+TGG | + | chr1.1:66869536-66869555 | MS.gene050225:CDS | 45.0% | |
| GCAGTGATGCAATTCTCCTT+GGG | + | chr1.1:66870123-66870142 | MS.gene050225:CDS | 45.0% | |
| GGAATGACGACAGATATCAC+AGG | - | chr1.1:66870962-66870981 | None:intergenic | 45.0% | |
| GTGTCTGCTTCAAGGGTAAT+TGG | - | chr1.1:66867769-66867788 | None:intergenic | 45.0% | |
| TATATGGGGAAGGGTAACCA+AGG | + | chr1.1:66871129-66871148 | MS.gene050225:intron | 45.0% | |
| TGCTCGAACCTGTATGTTTC+AGG | - | chr1.1:66870647-66870666 | None:intergenic | 45.0% | |
| TTAGGTAATACGCACATGGG+GGG | + | chr1.1:66869032-66869051 | MS.gene050225:intron | 45.0% | |
| TTTCACAATACAGGTCAGCG+AGG | + | chr1.1:66868501-66868520 | MS.gene050225:intron | 45.0% | |
| ! | GTTGCCAATGCAGTATTGGA+TGG | + | chr1.1:66869888-66869907 | MS.gene050225:CDS | 45.0% |
| ! | TGCACGGTTTGACTTCTCAT+GGG | + | chr1.1:66867448-66867467 | MS.gene050225:CDS | 45.0% |
| ! | TGCGTCCGATTTTCATTTGC+AGG | + | chr1.1:66869269-66869288 | MS.gene050225:intron | 45.0% |
| ! | TTAGACCATGGCAAGGCTTT+TGG | + | chr1.1:66871310-66871329 | MS.gene050225:CDS | 45.0% |
| ! | TTGCACGGTTTGACTTCTCA+TGG | + | chr1.1:66867447-66867466 | MS.gene050225:CDS | 45.0% |
| !! | ATCATTCTTACAGGGTGTCG+AGG | - | chr1.1:66871082-66871101 | None:intergenic | 45.0% |
| ACCACACGTGTGACAACAAC+GGG | - | chr1.1:66869819-66869838 | None:intergenic | 50.0% | |
| AGATACCGACCTTCTCAGGT+GGG | - | chr1.1:66869580-66869599 | None:intergenic | 50.0% | |
| ATACAGGTCAGCGAGGTGAA+TGG | + | chr1.1:66868508-66868527 | MS.gene050225:intron | 50.0% | |
| CAACTCCGATGGACATTCAC+CGG | + | chr1.1:66870998-66871017 | MS.gene050225:CDS | 50.0% | |
| CAATCGGGAAAATGCTGTGC+AGG | + | chr1.1:66871168-66871187 | MS.gene050225:intron | 50.0% | |
| CGGCAGTCACTTATTGTGAG+AGG | + | chr1.1:66871034-66871053 | MS.gene050225:CDS | 50.0% | |
| CTGACGAGTCACCAACTTTC+TGG | - | chr1.1:66871369-66871388 | None:intergenic | 50.0% | |
| CTGCTTCACCTCATCTGGAA+GGG | + | chr1.1:66870696-66870715 | MS.gene050225:CDS | 50.0% | |
| CTTCACGGCCTGCATAATCA+TGG | - | chr1.1:66867980-66867999 | None:intergenic | 50.0% | |
| GACATTCACCGGTGCATTTC+AGG | + | chr1.1:66871009-66871028 | MS.gene050225:CDS | 50.0% | |
| GACCACACGTGTGACAACAA+CGG | - | chr1.1:66869820-66869839 | None:intergenic | 50.0% | |
| GACGACAGATATCACAGGCA+TGG | - | chr1.1:66870957-66870976 | None:intergenic | 50.0% | |
| GATAGATCTCCCACCTGAGA+AGG | + | chr1.1:66869568-66869587 | MS.gene050225:CDS | 50.0% | |
| GATTATGCAGGCCGTGAAGA+AGG | + | chr1.1:66867981-66868000 | MS.gene050225:intron | 50.0% | |
| GATTCGGCCTGCACGAAAAA+AGG | - | chr1.1:66871253-66871272 | None:intergenic | 50.0% | |
| GGCAGTGATGCAATTCTCCT+TGG | + | chr1.1:66870122-66870141 | MS.gene050225:intron | 50.0% | |
| TAGATACCGACCTTCTCAGG+TGG | - | chr1.1:66869581-66869600 | None:intergenic | 50.0% | |
| TCTGCTTCACCTCATCTGGA+AGG | + | chr1.1:66870695-66870714 | MS.gene050225:CDS | 50.0% | |
| TGATGCCAAAAGCCTTGCCA+TGG | - | chr1.1:66871318-66871337 | None:intergenic | 50.0% | |
| ! | AGGTCTTTTCCCTATGCTGG+CGG | + | chr1.1:66871054-66871073 | MS.gene050225:CDS | 50.0% |
| ! | ATGCACCGGTGAATGTCCAT+CGG | - | chr1.1:66871006-66871025 | None:intergenic | 50.0% |
| ! | GAGAGGTCTTTTCCCTATGC+TGG | + | chr1.1:66871051-66871070 | MS.gene050225:CDS | 50.0% |
| ! | GCACAGCATTTTCCCGATTG+AGG | - | chr1.1:66871168-66871187 | None:intergenic | 50.0% |
| ! | GCACGGTTTGACTTCTCATG+GGG | + | chr1.1:66867449-66867468 | MS.gene050225:CDS | 50.0% |
| ! | GGTTGCTTTAGACCATGGCA+AGG | + | chr1.1:66871303-66871322 | MS.gene050225:CDS | 50.0% |
| CGTGCCGGGTGTATAATGAG+AGG | - | chr1.1:66869077-66869096 | None:intergenic | 55.0% | |
| GATCTCCCACCTGAGAAGGT+CGG | + | chr1.1:66869572-66869591 | MS.gene050225:intron | 55.0% | |
| GTGCAGGCCGAATCGAATAC+TGG | + | chr1.1:66871259-66871278 | MS.gene050225:intron | 55.0% | |
| TCACCGGTGCATTTCAGGCT+CGG | + | chr1.1:66871014-66871033 | MS.gene050225:CDS | 55.0% | |
| TCGAGCAGCCGTCAAGGTTA+AGG | + | chr1.1:66870660-66870679 | MS.gene050225:CDS | 55.0% | |
| TCGGTTGCTTCAGCACGAGT+AGG | - | chr1.1:66869867-66869886 | None:intergenic | 55.0% | |
| ACAGGTTCGAGCAGCCGTCA+AGG | + | chr1.1:66870654-66870673 | MS.gene050225:intron | 60.0% | |
| CAGTAAGGGTCTCTGCCCCA+AGG | - | chr1.1:66870142-66870161 | None:intergenic | 60.0% | |
| CCTCATCTGGAAGGGCTGCA+AGG | + | chr1.1:66870704-66870723 | MS.gene050225:CDS | 60.0% | |
| CCTTGCAGCCCTTCCAGATG+AGG | - | chr1.1:66870707-66870726 | None:intergenic | 60.0% | |
| CTGCCGAGCCTGAAATGCAC+CGG | - | chr1.1:66871020-66871039 | None:intergenic | 60.0% | |
| CTTGGGGCAGAGACCCTTAC+TGG | + | chr1.1:66870140-66870159 | MS.gene050225:CDS | 60.0% | |
| GCCCGTTGTTGTCACACGTG+TGG | + | chr1.1:66869815-66869834 | MS.gene050225:CDS | 60.0% | |
| GCGAACATCTTCAGCGTGCC+GGG | - | chr1.1:66869091-66869110 | None:intergenic | 60.0% | |
| GGCGAACATCTTCAGCGTGC+CGG | - | chr1.1:66869092-66869111 | None:intergenic | 60.0% | |
| GGGAGAGCCTATGAGCCACA+TGG | + | chr1.1:66870513-66870532 | MS.gene050225:CDS | 60.0% | |
| GTCGAGGATCCGCCAGCATA+GGG | - | chr1.1:66871066-66871085 | None:intergenic | 60.0% | |
| GTGCAGGCCGAGTCGAATAC+TGG | + | chr1.1:66871184-66871203 | MS.gene050225:intron | 60.0% | |
| TGTCGAGGATCCGCCAGCAT+AGG | - | chr1.1:66871067-66871086 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 66867447 | 66871417 | 66867447 | ID=MS.gene050225 |
| chr1.1 | mRNA | 66867447 | 66871417 | 66867447 | ID=MS.gene050225.t1;Parent=MS.gene050225 |
| chr1.1 | exon | 66867447 | 66867544 | 66867447 | ID=MS.gene050225.t1.exon1;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66867447 | 66867544 | 66867447 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66867712 | 66867867 | 66867712 | ID=MS.gene050225.t1.exon2;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66867712 | 66867867 | 66867712 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66867991 | 66868068 | 66867991 | ID=MS.gene050225.t1.exon3;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66867991 | 66868068 | 66867991 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66868514 | 66868645 | 66868514 | ID=MS.gene050225.t1.exon4;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66868514 | 66868645 | 66868514 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66869036 | 66869113 | 66869036 | ID=MS.gene050225.t1.exon5;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66869036 | 66869113 | 66869036 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66869291 | 66869362 | 66869291 | ID=MS.gene050225.t1.exon6;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66869291 | 66869362 | 66869291 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66869500 | 66869589 | 66869500 | ID=MS.gene050225.t1.exon7;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66869500 | 66869589 | 66869500 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66869765 | 66869909 | 66869765 | ID=MS.gene050225.t1.exon8;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66869765 | 66869909 | 66869765 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66870123 | 66870211 | 66870123 | ID=MS.gene050225.t1.exon9;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66870123 | 66870211 | 66870123 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66870460 | 66870555 | 66870460 | ID=MS.gene050225.t1.exon10;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66870460 | 66870555 | 66870460 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66870658 | 66870725 | 66870658 | ID=MS.gene050225.t1.exon11;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66870658 | 66870725 | 66870658 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66870931 | 66871090 | 66870931 | ID=MS.gene050225.t1.exon12;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66870931 | 66871090 | 66870931 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| chr1.1 | exon | 66871265 | 66871417 | 66871265 | ID=MS.gene050225.t1.exon13;Parent=MS.gene050225.t1 |
| chr1.1 | CDS | 66871265 | 66871417 | 66871265 | ID=cds.MS.gene050225.t1;Parent=MS.gene050225.t1 |
| Gene Sequence |
| Protein sequence |
