Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20060.t1 | XP_003625622.1 | 98.5 | 267 | 4 | 0 | 26 | 292 | 86 | 352 | 4.70E-148 | 533.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20060.t1 | Q9S752 | 64.1 | 276 | 89 | 4 | 22 | 288 | 95 | 369 | 1.8e-95 | 350.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20060.t1 | Q2HV40 | 98.5 | 267 | 4 | 0 | 26 | 292 | 86 | 352 | 3.4e-148 | 533.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene20060 | -0.816423 | 5.57E-52 | -1.69E-46 |
| MS.gene050547 | MS.gene20060 | 0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene20060 | -0.806655 | 7.40E-50 | -1.69E-46 |
| MS.gene055370 | MS.gene20060 | -0.831204 | 1.91E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20060.t1 | MTR_7g101150 | 96.321 | 299 | 4 | 1 | 1 | 292 | 54 | 352 | 0.0 | 593 |
| MS.gene20060.t1 | MTR_7g101150 | 89.925 | 268 | 3 | 1 | 25 | 292 | 85 | 328 | 5.62e-174 | 484 |
| MS.gene20060.t1 | MTR_1g064680 | 75.618 | 283 | 58 | 5 | 15 | 291 | 68 | 345 | 5.43e-150 | 424 |
| MS.gene20060.t1 | MTR_2g022210 | 49.421 | 259 | 122 | 3 | 43 | 292 | 127 | 385 | 1.96e-86 | 264 |
| MS.gene20060.t1 | MTR_4g117250 | 45.364 | 302 | 146 | 8 | 5 | 292 | 61 | 357 | 1.33e-83 | 255 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20060.t1 | AT3G09770 | 65.169 | 267 | 87 | 3 | 27 | 288 | 104 | 369 | 1.74e-120 | 350 |
| MS.gene20060.t1 | AT3G53410 | 57.045 | 291 | 105 | 6 | 4 | 292 | 25 | 297 | 2.24e-107 | 314 |
| MS.gene20060.t1 | AT5G03200 | 54.545 | 297 | 112 | 5 | 4 | 287 | 48 | 334 | 3.71e-100 | 297 |
| MS.gene20060.t1 | AT3G09770 | 60.426 | 235 | 87 | 3 | 27 | 256 | 104 | 337 | 7.16e-94 | 281 |
| MS.gene20060.t1 | AT5G19080 | 47.651 | 298 | 140 | 6 | 6 | 292 | 83 | 375 | 2.09e-86 | 263 |
| MS.gene20060.t1 | AT3G06140 | 45.946 | 296 | 146 | 6 | 3 | 292 | 69 | 356 | 1.00e-76 | 238 |
Find 85 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTTGATGCTGCCGTATC+TGG | 0.118140 | 7.2:+11159669 | MS.gene20060:CDS |
| ACAACCAGTTGAAAGGCTTT+TGG | 0.292916 | 7.2:+11164264 | MS.gene20060:CDS |
| ATCTGATCCATCATGATTAC+CGG | 0.362191 | 7.2:-11163664 | None:intergenic |
| TCCTCATATGGATCCTGCTT+GGG | 0.365700 | 7.2:+11159488 | MS.gene20060:CDS |
| CAACTGGTTGTCTGCAAATC+GGG | 0.370008 | 7.2:-11164252 | None:intergenic |
| TCAACTGGTTGTCTGCAAAT+CGG | 0.372927 | 7.2:-11164253 | None:intergenic |
| TGGATCCTGCTTGGGTTTCT+CGG | 0.382151 | 7.2:+11159496 | MS.gene20060:CDS |
| ACTTCTGTCCAAGACCTTGC+TGG | 0.386692 | 7.2:-11163530 | None:intergenic |
| GCTTGAGTTATCTGAGAGTT+TGG | 0.387330 | 7.2:-11163708 | None:intergenic |
| TATGAGCTGCAGGAGATATA+TGG | 0.402009 | 7.2:+11163804 | MS.gene20060:CDS |
| CCTTTGATGCTGCCGTATCT+GGG | 0.410660 | 7.2:+11159670 | MS.gene20060:CDS |
| ATCTCCAAAAGCCTTTCAAC+TGG | 0.415200 | 7.2:-11164268 | None:intergenic |
| GCCTCATCATCATCCTCATA+TGG | 0.433411 | 7.2:+11159476 | MS.gene20060:CDS |
| GGAGTCAGATTTAGTAAAGG+TGG | 0.440813 | 7.2:+11163596 | MS.gene20060:CDS |
| TGTTCACCCCTGCCGACATA+TGG | 0.446468 | 7.2:+11163914 | MS.gene20060:CDS |
| TTTAGACAGCAAGCTGGAAC+TGG | 0.459183 | 7.2:+11163552 | MS.gene20060:CDS |
| TCACCTGATGAGGAAAATCC+TGG | 0.463626 | 7.2:+11159627 | MS.gene20060:CDS |
| ATCCTCATATGGATCCTGCT+TGG | 0.463662 | 7.2:+11159487 | MS.gene20060:CDS |
| GCGGTGTTTGAGAAGGAAAA+AGG | 0.465111 | 7.2:+11163729 | MS.gene20060:CDS |
| CTGCAGGAGATATATGGTAT+TGG | 0.477865 | 7.2:+11163810 | MS.gene20060:CDS |
| GTACAATTCCAGCAAGGTCT+TGG | 0.478019 | 7.2:+11163522 | MS.gene20060:CDS |
| TTCTTTGCAAAAGAAGATGA+AGG | 0.485414 | 7.2:+11163453 | MS.gene20060:CDS |
| AAATGATGTTAATATTAAGA+AGG | 0.487123 | 7.2:+11159590 | MS.gene20060:CDS |
| TGAATATACCATATGTCGGC+AGG | 0.487759 | 7.2:-11163922 | None:intergenic |
| GGAGATAAAGGTAGGGACTG+AGG | 0.488255 | 7.2:+11164285 | MS.gene20060:CDS |
| AAATCGGGCATCTATTTGTC+TGG | 0.489041 | 7.2:-11164237 | None:intergenic |
| CCCAGATACGGCAGCATCAA+AGG | 0.490547 | 7.2:-11159670 | None:intergenic |
| TACAGTCACAGGTGCAAGAT+GGG | 0.494387 | 7.2:-11163502 | None:intergenic |
| GCTTTCTGATGCTCAACAAA+AGG | 0.497062 | 7.2:-11159555 | None:intergenic |
| AAGCAGATCTTGTCGGTGAA+TGG | 0.499467 | 7.2:+11163774 | MS.gene20060:CDS |
| TGAGGAGTCAGATTTAGTAA+AGG | 0.513325 | 7.2:+11163593 | MS.gene20060:CDS |
| TGATGCTCAACAAAAGGTGC+AGG | 0.520299 | 7.2:-11159549 | None:intergenic |
| AGTTGTTAAGCAGATCTTGT+CGG | 0.530254 | 7.2:+11163767 | MS.gene20060:CDS |
| TAACCAGGGTAATGATATTG+AGG | 0.535672 | 7.2:-11159432 | None:intergenic |
| GCATCATCCGGTAATCATGA+TGG | 0.536466 | 7.2:+11163657 | MS.gene20060:CDS |
| ACCCAAGCAGGATCCATATG+AGG | 0.538916 | 7.2:-11159489 | None:intergenic |
| TGGAATGCGGTATGAGCTGC+AGG | 0.539501 | 7.2:+11163794 | MS.gene20060:CDS |
| TTTGCAGACAACCAGTTGAA+AGG | 0.542468 | 7.2:+11164257 | MS.gene20060:CDS |
| GAGTCAGATTTAGTAAAGGT+GGG | 0.543543 | 7.2:+11163597 | MS.gene20060:CDS |
| CATTGTAATTTCACCTGATG+AGG | 0.545895 | 7.2:+11159617 | MS.gene20060:CDS |
| GTTTCTCGGTACTACCCTTG+TGG | 0.547007 | 7.2:+11159510 | MS.gene20060:CDS |
| GAAAACTAACCTCCCAGATA+CGG | 0.551062 | 7.2:-11159682 | None:intergenic |
| GCAAGATGGGTTACCTTGGT+CGG | 0.553514 | 7.2:-11163489 | None:intergenic |
| GTGAAGGCAGATGCATCATC+CGG | 0.554451 | 7.2:+11163645 | MS.gene20060:CDS |
| TTTAGTAAAGGTGGGTGACA+TGG | 0.558071 | 7.2:+11163605 | MS.gene20060:CDS |
| TGCTGGAATTGTACAGTCAC+AGG | 0.558091 | 7.2:-11163513 | None:intergenic |
| GCATCTGCCTTCACTGCTAG+AGG | 0.560301 | 7.2:-11163636 | None:intergenic |
| TGAGGATGATGATGAGGCAT+AGG | 0.565184 | 7.2:-11159471 | None:intergenic |
| AACTCAAGCGGTGTTTGAGA+AGG | 0.567507 | 7.2:+11163722 | MS.gene20060:CDS |
| TGATGATGAGGCATAGGTAT+TGG | 0.570267 | 7.2:-11159465 | None:intergenic |
| TGATTCACCACGGGTCCACA+AGG | 0.574272 | 7.2:-11159525 | None:intergenic |
| ATTGGTGGTGGATAATAACC+AGG | 0.584398 | 7.2:-11159447 | None:intergenic |
| TGTTTACCCTCTAGCAGTGA+AGG | 0.588610 | 7.2:+11163629 | MS.gene20060:CDS |
| TGATGAGGCATAGGTATTGG+TGG | 0.589183 | 7.2:-11159462 | None:intergenic |
| GAATATACCATATGTCGGCA+GGG | 0.589767 | 7.2:-11163921 | None:intergenic |
| GTACTACCCTTGTGGACCCG+TGG | 0.593118 | 7.2:+11159518 | MS.gene20060:CDS |
| CATCAAAGGTAAACGAAACA+AGG | 0.594203 | 7.2:-11159656 | None:intergenic |
| CTCATCAGGTGAAATTACAA+TGG | 0.602365 | 7.2:-11159616 | None:intergenic |
| TCCATATGAGGATGATGATG+AGG | 0.604041 | 7.2:-11159477 | None:intergenic |
| CTGCATCCTCACACCGACCA+AGG | 0.607910 | 7.2:+11163476 | MS.gene20060:CDS |
| TATCCTCAATATCATTACCC+TGG | 0.611148 | 7.2:+11159429 | MS.gene20060:CDS |
| CAGAAGTTTAGACAGCAAGC+TGG | 0.612738 | 7.2:+11163546 | MS.gene20060:CDS |
| GTACAGTCACAGGTGCAAGA+TGG | 0.616443 | 7.2:-11163503 | None:intergenic |
| AATATACCATATGTCGGCAG+GGG | 0.619940 | 7.2:-11163920 | None:intergenic |
| ATGCTGAATATACCATATGT+CGG | 0.621925 | 7.2:-11163926 | None:intergenic |
| ATATGGTATTGGAAATTCAG+TGG | 0.622521 | 7.2:+11163821 | MS.gene20060:CDS |
| GGTGCAGGTTGATTCACCAC+GGG | 0.630188 | 7.2:-11159534 | None:intergenic |
| CATCTGCCTTCACTGCTAGA+GGG | 0.633223 | 7.2:-11163635 | None:intergenic |
| AGGTGCAAGATGGGTTACCT+TGG | 0.637199 | 7.2:-11163493 | None:intergenic |
| TAGTACCGAGAAACCCAAGC+AGG | 0.641166 | 7.2:-11159501 | None:intergenic |
| TGATATTGAGGATAATGCAT+GGG | 0.642567 | 7.2:-11159420 | None:intergenic |
| AAACTCTCAGATAACTCAAG+CGG | 0.648497 | 7.2:+11163710 | MS.gene20060:CDS |
| TGAGGCATAGGTATTGGTGG+TGG | 0.650004 | 7.2:-11159459 | None:intergenic |
| ATGATATTGAGGATAATGCA+TGG | 0.652411 | 7.2:-11159421 | None:intergenic |
| GGGTGAACAATTGTGTCGCG+AGG | 0.663631 | 7.2:-11163900 | None:intergenic |
| GGGTTACCTTGGTCGGTGTG+AGG | 0.665482 | 7.2:-11163482 | None:intergenic |
| AGGTGCAGGTTGATTCACCA+CGG | 0.673012 | 7.2:-11159535 | None:intergenic |
| CATGTGTAGTGGATGTGCAA+AGG | 0.675895 | 7.2:+11164204 | MS.gene20060:CDS |
| TTGATGCTGCCGTATCTGGG+AGG | 0.677621 | 7.2:+11159673 | MS.gene20060:CDS |
| AAATTCAGTGGAGAGTGATG+TGG | 0.682565 | 7.2:+11163833 | MS.gene20060:CDS |
| GTGACTGTACAATTCCAGCA+AGG | 0.698948 | 7.2:+11163516 | MS.gene20060:CDS |
| TCTTGTCGGTGAATGGAATG+CGG | 0.716236 | 7.2:+11163781 | MS.gene20060:CDS |
| GATGTGGATGACAATGAACA+AGG | 0.723839 | 7.2:+11163849 | MS.gene20060:CDS |
| GATTCACCACGGGTCCACAA+GGG | 0.725292 | 7.2:-11159524 | None:intergenic |
| TTGGTGGTGGATAATAACCA+GGG | 0.728249 | 7.2:-11159446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATATAATGAACTT+CGG | - | chr7.2:11162028-11162047 | None:intergenic | 10.0% |
| !! | GTATATATACATAATATAAT+AGG | - | chr7.2:11161480-11161499 | None:intergenic | 10.0% |
| !! | AAATGATGTTAATATTAAGA+AGG | + | chr7.2:11159590-11159609 | MS.gene20060:CDS | 15.0% |
| !! | AAATTAGTAGTATTAATTAG+GGG | + | chr7.2:11162243-11162262 | MS.gene20060:intron | 15.0% |
| !! | AAGATACATATATATATGAA+AGG | - | chr7.2:11161263-11161282 | None:intergenic | 15.0% |
| !! | ACAAATTAGTAGTATTAATT+AGG | + | chr7.2:11162241-11162260 | MS.gene20060:intron | 15.0% |
| !! | CAAATTAGTAGTATTAATTA+GGG | + | chr7.2:11162242-11162261 | MS.gene20060:intron | 15.0% |
| !! | GCAAAGAATTAATAATAAAT+TGG | - | chr7.2:11161755-11161774 | None:intergenic | 15.0% |
| !! | TAAAATCATAATGATGATTA+TGG | + | chr7.2:11163357-11163376 | MS.gene20060:intron | 15.0% |
| !! | TAATTTCTATGAGATATTAA+GGG | - | chr7.2:11160197-11160216 | None:intergenic | 15.0% |
| !! | TTAATATCTCATAGAAATTA+GGG | + | chr7.2:11160197-11160216 | MS.gene20060:intron | 15.0% |
| !! | TTTCTTGAAGAATTTATTAA+TGG | + | chr7.2:11159964-11159983 | MS.gene20060:intron | 15.0% |
| !!! | AAATTGTACTTTTATAATGA+AGG | - | chr7.2:11161353-11161372 | None:intergenic | 15.0% |
| !!! | AATGTGTTATTTTAATGTTT+TGG | + | chr7.2:11159731-11159750 | MS.gene20060:intron | 15.0% |
| !!! | AGTTTATTTTTCTTGATTAA+AGG | + | chr7.2:11161177-11161196 | MS.gene20060:intron | 15.0% |
| !!! | ATGTGTTATTTTAATGTTTT+GGG | + | chr7.2:11159732-11159751 | MS.gene20060:intron | 15.0% |
| !!! | GGTCTTATAAAAAAATTAAT+TGG | + | chr7.2:11161729-11161748 | MS.gene20060:intron | 15.0% |
| !!! | GTTTATTTTTCTTGATTAAA+GGG | + | chr7.2:11161178-11161197 | MS.gene20060:intron | 15.0% |
| !!! | TGTTTTATAATAAAGTTTAC+AGG | + | chr7.2:11159865-11159884 | MS.gene20060:intron | 15.0% |
| !!! | TTTATTTTTCTTGATTAAAG+GGG | + | chr7.2:11161179-11161198 | MS.gene20060:intron | 15.0% |
| !! | CGAAAAATTTCATTCAAAAA+AGG | - | chr7.2:11163952-11163971 | None:intergenic | 20.0% |
| !! | CTAATTTCTATGAGATATTA+AGG | - | chr7.2:11160198-11160217 | None:intergenic | 20.0% |
| !! | CTTAATATCTCATAGAAATT+AGG | + | chr7.2:11160196-11160215 | MS.gene20060:intron | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | + | chr7.2:11162325-11162344 | MS.gene20060:intron | 20.0% |
| !! | TAAATTCTTCAAGAAACATT+TGG | - | chr7.2:11159960-11159979 | None:intergenic | 20.0% |
| !! | TACACAAAAATAGCAAAATA+CGG | - | chr7.2:11162408-11162427 | None:intergenic | 20.0% |
| !! | TTTATTACACATACAAACAA+AGG | - | chr7.2:11162200-11162219 | None:intergenic | 20.0% |
| !!! | ATTTAAAATAGGGTTAATTC+AGG | - | chr7.2:11161692-11161711 | None:intergenic | 20.0% |
| !!! | TAATTTTCAGCAGTTAAATT+TGG | - | chr7.2:11164127-11164146 | None:intergenic | 20.0% |
| !!! | TATTAACTTTTCAATGTTTG+AGG | + | chr7.2:11163575-11163594 | MS.gene20060:CDS | 20.0% |
| !!! | TTATTTTTCTTGATTAAAGG+GGG | + | chr7.2:11161180-11161199 | MS.gene20060:intron | 20.0% |
| !!! | TTCTTTTGCAAAGAAAAATA+TGG | - | chr7.2:11163448-11163467 | None:intergenic | 20.0% |
| !!! | TTGTATGTTTTGTTTAAGAA+TGG | + | chr7.2:11160027-11160046 | MS.gene20060:intron | 20.0% |
| !!! | TTTAAAATAGGGTTAATTCA+GGG | - | chr7.2:11161691-11161710 | None:intergenic | 20.0% |
| !!! | TTTGAAACAATTTCAGTTTT+AGG | + | chr7.2:11164075-11164094 | MS.gene20060:intron | 20.0% |
| !!! | TTTTTTGAAGCACTTATATT+TGG | - | chr7.2:11162876-11162895 | None:intergenic | 20.0% |
| ! | AAACACAACAATATACAAAG+AGG | - | chr7.2:11159787-11159806 | None:intergenic | 25.0% |
| ! | AACACAACAATATACAAAGA+GGG | - | chr7.2:11159786-11159805 | None:intergenic | 25.0% |
| ! | AAGAAATGTGAAAAAAGCAA+AGG | - | chr7.2:11162118-11162137 | None:intergenic | 25.0% |
| ! | AATAAGATATTTGCCAAGAT+TGG | - | chr7.2:11164032-11164051 | None:intergenic | 25.0% |
| ! | ACATTGTGAGCATTTATAAT+TGG | + | chr7.2:11161292-11161311 | MS.gene20060:intron | 25.0% |
| ! | ACTCTGTTGAACTTATAATA+CGG | + | chr7.2:11160862-11160881 | MS.gene20060:intron | 25.0% |
| ! | ACTGAAATTGTTTCAAAAGA+AGG | - | chr7.2:11164072-11164091 | None:intergenic | 25.0% |
| ! | ACTGCTGAAAATTACTTATT+TGG | + | chr7.2:11164133-11164152 | MS.gene20060:intron | 25.0% |
| ! | AGAAATGTGAAAAAAGCAAA+GGG | - | chr7.2:11162117-11162136 | None:intergenic | 25.0% |
| ! | AGCAAAATACGGAAAATTAA+AGG | - | chr7.2:11162397-11162416 | None:intergenic | 25.0% |
| ! | ATATGAAAGGAAACAAAACA+AGG | - | chr7.2:11161250-11161269 | None:intergenic | 25.0% |
| ! | ATCAATATTATGACCAATCT+TGG | + | chr7.2:11164016-11164035 | MS.gene20060:intron | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | + | chr7.2:11162289-11162308 | MS.gene20060:intron | 25.0% |
| ! | ATGTTGTTAATCTCATATAG+CGG | - | chr7.2:11162538-11162557 | None:intergenic | 25.0% |
| ! | ATTATAGACAAAATATGACG+AGG | - | chr7.2:11162678-11162697 | None:intergenic | 25.0% |
| ! | CAAAATAGAGACTACAATTA+AGG | - | chr7.2:11160489-11160508 | None:intergenic | 25.0% |
| ! | CATCCTGATTACTAAAAATA+TGG | + | chr7.2:11160550-11160569 | MS.gene20060:intron | 25.0% |
| ! | CTTAATCGGTAATGTATATT+AGG | - | chr7.2:11163114-11163133 | None:intergenic | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | + | chr7.2:11162324-11162343 | MS.gene20060:intron | 25.0% |
| ! | TAAAAATATGGCTAAGTAGT+AGG | + | chr7.2:11160562-11160581 | MS.gene20060:intron | 25.0% |
| ! | TACATAATACTCCTTGATAT+GGG | - | chr7.2:11163238-11163257 | None:intergenic | 25.0% |
| ! | TCATTCAAATTGTCGTAATT+GGG | - | chr7.2:11160442-11160461 | None:intergenic | 25.0% |
| ! | TGAAAAGGAGTTTACATTTA+GGG | + | chr7.2:11162304-11162323 | MS.gene20060:intron | 25.0% |
| ! | TGAATGACAAAAGATATTGT+TGG | + | chr7.2:11160455-11160474 | MS.gene20060:intron | 25.0% |
| ! | TGCTCTTAAGTTTACTTAAT+CGG | - | chr7.2:11163128-11163147 | None:intergenic | 25.0% |
| ! | TTACATAATACTCCTTGATA+TGG | - | chr7.2:11163239-11163258 | None:intergenic | 25.0% |
| ! | TTATAAATGCTCACAATGTT+CGG | - | chr7.2:11161291-11161310 | None:intergenic | 25.0% |
| ! | TTGAAAAGGAGTTTACATTT+AGG | + | chr7.2:11162303-11162322 | MS.gene20060:intron | 25.0% |
| ! | TTTATAATGAAGGAGGATAT+TGG | - | chr7.2:11161343-11161362 | None:intergenic | 25.0% |
| !! | CTTAATTGTAGTCTCTATTT+TGG | + | chr7.2:11160487-11160506 | MS.gene20060:intron | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | + | chr7.2:11162253-11162272 | MS.gene20060:intron | 25.0% |
| !! | TTGTACTTTTATAATGAAGG+AGG | - | chr7.2:11161350-11161369 | None:intergenic | 25.0% |
| !!! | ACATTACGAACTGATTTTAT+AGG | - | chr7.2:11160239-11160258 | None:intergenic | 25.0% |
| !!! | AGTATAATGAACTTTTTGGT+GGG | - | chr7.2:11162071-11162090 | None:intergenic | 25.0% |
| !!! | ATGTTTTGTTTAAGAATGGA+TGG | + | chr7.2:11160031-11160050 | MS.gene20060:intron | 25.0% |
| !!! | CATTACGAACTGATTTTATA+GGG | - | chr7.2:11160238-11160257 | None:intergenic | 25.0% |
| !!! | TAGCCATATTTTTAGTAATC+AGG | - | chr7.2:11160556-11160575 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTAAGAATGGAT+GGG | + | chr7.2:11160032-11160051 | MS.gene20060:intron | 25.0% |
| AAAATCCCAAGATTCAACAA+TGG | + | chr7.2:11162892-11162911 | MS.gene20060:intron | 30.0% | |
| AAATGTGAAAAAAGCAAAGG+GGG | - | chr7.2:11162115-11162134 | None:intergenic | 30.0% | |
| AAGCTCTCTAACATAGAAAA+CGG | + | chr7.2:11161381-11161400 | MS.gene20060:intron | 30.0% | |
| AAGTAGCGTTTGTATTAAGT+TGG | + | chr7.2:11161081-11161100 | MS.gene20060:intron | 30.0% | |
| AATAGAGACTACAATTAAGG+AGG | - | chr7.2:11160486-11160505 | None:intergenic | 30.0% | |
| ACACTAAAAAGATCTATAGC+TGG | - | chr7.2:11161502-11161521 | None:intergenic | 30.0% | |
| AGTAAGCTAATTGAATGGAA+AGG | + | chr7.2:11160929-11160948 | MS.gene20060:intron | 30.0% | |
| AGTTGATTGAATGATACTGA+TGG | + | chr7.2:11163978-11163997 | MS.gene20060:intron | 30.0% | |
| ATCAAAGATTGTGCTAGTTA+TGG | - | chr7.2:11160152-11160171 | None:intergenic | 30.0% | |
| ATCAAATCGATGTTCAAATC+AGG | + | chr7.2:11163047-11163066 | MS.gene20060:intron | 30.0% | |
| ATCATTCCATTGTTGAATCT+TGG | - | chr7.2:11162901-11162920 | None:intergenic | 30.0% | |
| ATCTCATAGAAATTAGGGTT+AGG | + | chr7.2:11160202-11160221 | MS.gene20060:intron | 30.0% | |
| ATGCTGAATATACCATATGT+CGG | - | chr7.2:11163929-11163948 | None:intergenic | 30.0% | |
| ATTCAGAGTTTACATAGACA+TGG | - | chr7.2:11160684-11160703 | None:intergenic | 30.0% | |
| CAAATGGGTGTTTAGATATA+GGG | + | chr7.2:11162340-11162359 | MS.gene20060:intron | 30.0% | |
| CACTAAAAAGTCTAAGTGAA+AGG | + | chr7.2:11160972-11160991 | MS.gene20060:intron | 30.0% | |
| CATAATGATGATTATGGATG+TGG | + | chr7.2:11163363-11163382 | MS.gene20060:intron | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | - | chr7.2:11162191-11162210 | None:intergenic | 30.0% | |
| CGTGTTTATGTTTCAAAGTA+AGG | + | chr7.2:11160803-11160822 | MS.gene20060:intron | 30.0% | |
| CTTTACTTTAGTTGTTCTGA+AGG | + | chr7.2:11163390-11163409 | MS.gene20060:intron | 30.0% | |
| GAAATGTGAAAAAAGCAAAG+GGG | - | chr7.2:11162116-11162135 | None:intergenic | 30.0% | |
| GTCATTCAAATTGTCGTAAT+TGG | - | chr7.2:11160443-11160462 | None:intergenic | 30.0% | |
| TAAAATCAGTTCGTAATGTG+AGG | + | chr7.2:11160240-11160259 | MS.gene20060:intron | 30.0% | |
| TCAAATGGGTGTTTAGATAT+AGG | + | chr7.2:11162339-11162358 | MS.gene20060:intron | 30.0% | |
| TCATTCCATTGTTGAATCTT+GGG | - | chr7.2:11162900-11162919 | None:intergenic | 30.0% | |
| TCTCATAGAAATTAGGGTTA+GGG | + | chr7.2:11160203-11160222 | MS.gene20060:intron | 30.0% | |
| TGAGATATTAAGGGTAGAAA+AGG | - | chr7.2:11160188-11160207 | None:intergenic | 30.0% | |
| TTCTTTGCAAAAGAAGATGA+AGG | + | chr7.2:11163453-11163472 | MS.gene20060:CDS | 30.0% | |
| ! | AAAACAAGGTAGAACCTTTT+CGG | - | chr7.2:11161236-11161255 | None:intergenic | 30.0% |
| ! | AACATGTTTTCTGTCAAATG+TGG | + | chr7.2:11162647-11162666 | MS.gene20060:intron | 30.0% |
| ! | AAGACACAGTTTTTCTTGTA+TGG | + | chr7.2:11159821-11159840 | MS.gene20060:intron | 30.0% |
| ! | AATGGTGTCAAAATAAGAGT+TGG | + | chr7.2:11159982-11160001 | MS.gene20060:intron | 30.0% |
| ! | ACATGTTTTCTGTCAAATGT+GGG | + | chr7.2:11162648-11162667 | MS.gene20060:intron | 30.0% |
| ! | ATATGGTATTGGAAATTCAG+TGG | + | chr7.2:11163821-11163840 | MS.gene20060:CDS | 30.0% |
| ! | ATTCTTTGCAAACACGTTTT+AGG | + | chr7.2:11161766-11161785 | MS.gene20060:intron | 30.0% |
| ! | CTATACTCTATAGCAGTTTT+GGG | + | chr7.2:11162497-11162516 | MS.gene20060:intron | 30.0% |
| ! | CTGATTTTATAGGGTTTAGT+GGG | - | chr7.2:11160229-11160248 | None:intergenic | 30.0% |
| ! | GAGTATAATGAACTTTTTGG+TGG | - | chr7.2:11162072-11162091 | None:intergenic | 30.0% |
| ! | TATACTCTATAGCAGTTTTG+GGG | + | chr7.2:11162498-11162517 | MS.gene20060:intron | 30.0% |
| ! | TTCCATTCAATTAGCTTACT+TGG | - | chr7.2:11160929-11160948 | None:intergenic | 30.0% |
| !! | ACTGATTTTATAGGGTTTAG+TGG | - | chr7.2:11160230-11160249 | None:intergenic | 30.0% |
| !! | AGGGAGTATAATGAACTTTT+TGG | - | chr7.2:11162075-11162094 | None:intergenic | 30.0% |
| !! | ATTTTGGCAAATAGAACCAT+TGG | + | chr7.2:11160503-11160522 | MS.gene20060:intron | 30.0% |
| !! | TTTTGCTGCTTACTTTATCA+AGG | + | chr7.2:11161433-11161452 | MS.gene20060:intron | 30.0% |
| !!! | GTTTTGTTTAAGAATGGATG+GGG | + | chr7.2:11160033-11160052 | MS.gene20060:intron | 30.0% |
| AAACTCTCAGATAACTCAAG+CGG | + | chr7.2:11163710-11163729 | MS.gene20060:CDS | 35.0% | |
| AACGAAACAAGGAAAAAACC+AGG | - | chr7.2:11159648-11159667 | None:intergenic | 35.0% | |
| AATGTGAAAAAAGCAAAGGG+GGG | - | chr7.2:11162114-11162133 | None:intergenic | 35.0% | |
| AATTCAGCCAAAGTATGTCA+CGG | - | chr7.2:11164166-11164185 | None:intergenic | 35.0% | |
| ACACAAGTGAGTGTTTACTT+GGG | + | chr7.2:11163166-11163185 | MS.gene20060:intron | 35.0% | |
| AGAAGGAAAAAGGAGAATTC+CGG | + | chr7.2:11163739-11163758 | MS.gene20060:CDS | 35.0% | |
| AGTTGTTAAGCAGATCTTGT+CGG | + | chr7.2:11163767-11163786 | MS.gene20060:CDS | 35.0% | |
| ATCTGATCCATCATGATTAC+CGG | - | chr7.2:11163667-11163686 | None:intergenic | 35.0% | |
| ATGGAATGATAAGTCTGTGT+AGG | + | chr7.2:11162911-11162930 | MS.gene20060:intron | 35.0% | |
| CATCAAAGGTAAACGAAACA+AGG | - | chr7.2:11159659-11159678 | None:intergenic | 35.0% | |
| CATTGTAATTTCACCTGATG+AGG | + | chr7.2:11159617-11159636 | MS.gene20060:CDS | 35.0% | |
| CTAATTTCTAAACCGTGAGT+CGG | + | chr7.2:11163081-11163100 | MS.gene20060:intron | 35.0% | |
| CTCATCAGGTGAAATTACAA+TGG | - | chr7.2:11159619-11159638 | None:intergenic | 35.0% | |
| GAGTCAGATTTAGTAAAGGT+GGG | + | chr7.2:11163597-11163616 | MS.gene20060:CDS | 35.0% | |
| GAGTTTACATAGACATGGTT+TGG | - | chr7.2:11160679-11160698 | None:intergenic | 35.0% | |
| GCACTTATATTTGGCATGTA+TGG | - | chr7.2:11162867-11162886 | None:intergenic | 35.0% | |
| GCTTACTTTATCAAGGTAGT+TGG | + | chr7.2:11161440-11161459 | MS.gene20060:intron | 35.0% | |
| GTATGGTAGGACAGAATAAT+CGG | + | chr7.2:11159906-11159925 | MS.gene20060:intron | 35.0% | |
| GTTAATTCAGGGATTTCAGT+TGG | - | chr7.2:11161680-11161699 | None:intergenic | 35.0% | |
| TAACCAGGGTAATGATATTG+AGG | - | chr7.2:11159435-11159454 | None:intergenic | 35.0% | |
| TACACAAGTGAGTGTTTACT+TGG | + | chr7.2:11163165-11163184 | MS.gene20060:intron | 35.0% | |
| TAGATTTGCACAGAATCACA+TGG | + | chr7.2:11160717-11160736 | MS.gene20060:intron | 35.0% | |
| TAGCTAGAGTTTACGACTTT+AGG | + | chr7.2:11160629-11160648 | MS.gene20060:intron | 35.0% | |
| TATCCTCAATATCATTACCC+TGG | + | chr7.2:11159429-11159448 | MS.gene20060:CDS | 35.0% | |
| TATGTTAGAGAGCTTCAAAG+TGG | - | chr7.2:11161376-11161395 | None:intergenic | 35.0% | |
| TCTTGTAGACTTATTCTACC+AGG | - | chr7.2:11162829-11162848 | None:intergenic | 35.0% | |
| TGAACTTGATGAACTTGGTA+TGG | + | chr7.2:11159889-11159908 | MS.gene20060:intron | 35.0% | |
| TGAGAGTCTACATAATTGCA+CGG | - | chr7.2:11162795-11162814 | None:intergenic | 35.0% | |
| TGAGGAGTCAGATTTAGTAA+AGG | + | chr7.2:11163593-11163612 | MS.gene20060:CDS | 35.0% | |
| TGATGTTGTATTGAGTCTTG+TGG | + | chr7.2:11163022-11163041 | MS.gene20060:intron | 35.0% | |
| TGATTCTGTGCAAATCTATG+AGG | - | chr7.2:11160715-11160734 | None:intergenic | 35.0% | |
| TGGAATGATAAGTCTGTGTA+GGG | + | chr7.2:11162912-11162931 | MS.gene20060:intron | 35.0% | |
| TGGTTACCTCCAAAATAGTT+TGG | + | chr7.2:11160077-11160096 | MS.gene20060:intron | 35.0% | |
| TTAAAGAGTTGTGGCTATCA+TGG | + | chr7.2:11161595-11161614 | MS.gene20060:intron | 35.0% | |
| TTATGACAATCACTCACACA+TGG | - | chr7.2:11163340-11163359 | None:intergenic | 35.0% | |
| TTGAGGATGATTTGAATGCA+TGG | + | chr7.2:11160740-11160759 | MS.gene20060:intron | 35.0% | |
| TTTATGTTGTTCGCGGTATT+CGG | + | chr7.2:11160116-11160135 | MS.gene20060:intron | 35.0% | |
| ! | AACAGACTGCCAAACTATTT+TGG | - | chr7.2:11160089-11160108 | None:intergenic | 35.0% |
| ! | AAGTGACAGCTTTAGTTACA+AGG | + | chr7.2:11163193-11163212 | MS.gene20060:intron | 35.0% |
| ! | ACTCTCAAGTTTTACAATCC+TGG | + | chr7.2:11162808-11162827 | MS.gene20060:intron | 35.0% |
| ! | ATAGTTTGGCAGTCTGTTTT+AGG | + | chr7.2:11160091-11160110 | MS.gene20060:intron | 35.0% |
| ! | CCCAGACAGCATTTAAAATA+GGG | - | chr7.2:11161702-11161721 | None:intergenic | 35.0% |
| ! | GCTATACTCTATAGCAGTTT+TGG | + | chr7.2:11162496-11162515 | MS.gene20060:intron | 35.0% |
| ! | TAGTTTGGCAGTCTGTTTTA+GGG | + | chr7.2:11160092-11160111 | MS.gene20060:intron | 35.0% |
| ! | TCTGCTTAACAACTTTTACC+CGG | - | chr7.2:11163761-11163780 | None:intergenic | 35.0% |
| !! | ACCCTATTTTAAATGCTGTC+TGG | + | chr7.2:11161698-11161717 | MS.gene20060:intron | 35.0% |
| !! | AGCGTTTGTATTAAGTTGGT+TGG | + | chr7.2:11161085-11161104 | MS.gene20060:intron | 35.0% |
| !! | CCCTATTTTAAATGCTGTCT+GGG | + | chr7.2:11161699-11161718 | MS.gene20060:intron | 35.0% |
| !! | CCTATTTTAAATGCTGTCTG+GGG | + | chr7.2:11161700-11161719 | MS.gene20060:intron | 35.0% |
| !! | TCAAGGAGTATTATGTAAGC+TGG | + | chr7.2:11163241-11163260 | MS.gene20060:intron | 35.0% |
| !! | TGAAAGGCTTTTGGAGATAA+AGG | + | chr7.2:11164273-11164292 | MS.gene20060:CDS | 35.0% |
| !! | TTAGGGTTTTATGTTGTTCG+CGG | + | chr7.2:11160109-11160128 | MS.gene20060:intron | 35.0% |
| !!! | CGACGTTCATTTTTTTCCTT+TGG | + | chr7.2:11161872-11161891 | MS.gene20060:intron | 35.0% |
| AAATCGGGCATCTATTTGTC+TGG | - | chr7.2:11164240-11164259 | None:intergenic | 40.0% | |
| AAATTCAGTGGAGAGTGATG+TGG | + | chr7.2:11163833-11163852 | MS.gene20060:CDS | 40.0% | |
| AACTCTTTAATGTGCATCGC+TGG | - | chr7.2:11161585-11161604 | None:intergenic | 40.0% | |
| AATATACCATATGTCGGCAG+GGG | - | chr7.2:11163923-11163942 | None:intergenic | 40.0% | |
| AGTGAAAGGCGAATTAGGAA+GGG | + | chr7.2:11161116-11161135 | MS.gene20060:intron | 40.0% | |
| ATCTCCAAAAGCCTTTCAAC+TGG | - | chr7.2:11164271-11164290 | None:intergenic | 40.0% | |
| CACAAGTGAGTGTTTACTTG+GGG | + | chr7.2:11163167-11163186 | MS.gene20060:intron | 40.0% | |
| CATTATCCTCCTTCGCATAT+AGG | - | chr7.2:11163004-11163023 | None:intergenic | 40.0% | |
| CGACTCACGGTTTAGAAATT+AGG | - | chr7.2:11163083-11163102 | None:intergenic | 40.0% | |
| CGATGCACATTAAAGAGTTG+TGG | + | chr7.2:11161586-11161605 | MS.gene20060:intron | 40.0% | |
| CTGCAGGAGATATATGGTAT+TGG | + | chr7.2:11163810-11163829 | MS.gene20060:CDS | 40.0% | |
| CTTGATGAACTTGGTATGGT+AGG | + | chr7.2:11159893-11159912 | MS.gene20060:intron | 40.0% | |
| GAAAACTAACCTCCCAGATA+CGG | - | chr7.2:11159685-11159704 | None:intergenic | 40.0% | |
| GAAGGAAAAAGGAGAATTCC+GGG | + | chr7.2:11163740-11163759 | MS.gene20060:CDS | 40.0% | |
| GAATATACCATATGTCGGCA+GGG | - | chr7.2:11163924-11163943 | None:intergenic | 40.0% | |
| GATGTGGATGACAATGAACA+AGG | + | chr7.2:11163849-11163868 | MS.gene20060:CDS | 40.0% | |
| GCTTGAGTTATCTGAGAGTT+TGG | - | chr7.2:11163711-11163730 | None:intergenic | 40.0% | |
| GCTTTCTGATGCTCAACAAA+AGG | - | chr7.2:11159558-11159577 | None:intergenic | 40.0% | |
| GGAGTCAGATTTAGTAAAGG+TGG | + | chr7.2:11163596-11163615 | MS.gene20060:CDS | 40.0% | |
| GGCATGTTAAAAGGAGAAAG+TGG | + | chr7.2:11160057-11160076 | MS.gene20060:intron | 40.0% | |
| GGCCAAGTAAGCTAATTGAA+TGG | + | chr7.2:11160924-11160943 | MS.gene20060:intron | 40.0% | |
| GTAGCTAAAGGGAGAGAAAA+AGG | + | chr7.2:11161038-11161057 | MS.gene20060:intron | 40.0% | |
| GTGAAAGGTGACTACTAAAG+AGG | + | chr7.2:11160987-11161006 | MS.gene20060:intron | 40.0% | |
| TAGCACGATAGTCTTTCCAA+TGG | - | chr7.2:11160522-11160541 | None:intergenic | 40.0% | |
| TATGAGCTGCAGGAGATATA+TGG | + | chr7.2:11163804-11163823 | MS.gene20060:CDS | 40.0% | |
| TCAACTGGTTGTCTGCAAAT+CGG | - | chr7.2:11164256-11164275 | None:intergenic | 40.0% | |
| TCCTTCGTGCATAGAAAGAA+AGG | - | chr7.2:11161929-11161948 | None:intergenic | 40.0% | |
| TCCTTTCTTTCTATGCACGA+AGG | + | chr7.2:11161925-11161944 | MS.gene20060:intron | 40.0% | |
| TGAAAGTCATCCACAAGTTC+TGG | + | chr7.2:11162604-11162623 | MS.gene20060:intron | 40.0% | |
| TGAATATACCATATGTCGGC+AGG | - | chr7.2:11163925-11163944 | None:intergenic | 40.0% | |
| TGGGTGTTTAGATATAGGGA+CGG | + | chr7.2:11162344-11162363 | MS.gene20060:intron | 40.0% | |
| TGTTTAGATATAGGGACGGA+GGG | + | chr7.2:11162348-11162367 | MS.gene20060:intron | 40.0% | |
| TTAGGATAAGATCCGACTCA+CGG | - | chr7.2:11163096-11163115 | None:intergenic | 40.0% | |
| TTGTTTAAGAATGGATGGGG+AGG | + | chr7.2:11160036-11160055 | MS.gene20060:intron | 40.0% | |
| TTTAGTAAAGGTGGGTGACA+TGG | + | chr7.2:11163605-11163624 | MS.gene20060:CDS | 40.0% | |
| TTTGCAGACAACCAGTTGAA+AGG | + | chr7.2:11164257-11164276 | MS.gene20060:CDS | 40.0% | |
| ! | AAACCAGGATTTTCCTCATC+AGG | - | chr7.2:11159633-11159652 | None:intergenic | 40.0% |
| ! | AAATGCTGTCTGGGGTATAT+TGG | + | chr7.2:11161708-11161727 | MS.gene20060:intron | 40.0% |
| ! | ACAACCAGTTGAAAGGCTTT+TGG | + | chr7.2:11164264-11164283 | MS.gene20060:CDS | 40.0% |
| ! | CAGGTTGAACTTGATGAACT+TGG | + | chr7.2:11159884-11159903 | MS.gene20060:intron | 40.0% |
| ! | CCCCAGACAGCATTTAAAAT+AGG | - | chr7.2:11161703-11161722 | None:intergenic | 40.0% |
| ! | GGACTGTCTAAGCAAGTTTT+TGG | + | chr7.2:11160261-11160280 | MS.gene20060:intron | 40.0% |
| ! | TCCATATGAGGATGATGATG+AGG | - | chr7.2:11159480-11159499 | None:intergenic | 40.0% |
| ! | TGATGATGAGGCATAGGTAT+TGG | - | chr7.2:11159468-11159487 | None:intergenic | 40.0% |
| ! | TTTTTGCAGTGCATGTGTAG+TGG | + | chr7.2:11164193-11164212 | MS.gene20060:intron | 40.0% |
| !! | AGACTGCCAAACTATTTTGG+AGG | - | chr7.2:11160086-11160105 | None:intergenic | 40.0% |
| !! | AGGCTTTTGGAGATAAAGGT+AGG | + | chr7.2:11164277-11164296 | MS.gene20060:CDS | 40.0% |
| !! | ATTGGTGGTGGATAATAACC+AGG | - | chr7.2:11159450-11159469 | None:intergenic | 40.0% |
| !! | CACAAATGCTTCTAAAGTCC+CGG | + | chr7.2:11162972-11162991 | MS.gene20060:intron | 40.0% |
| !! | CTTTGCAAACACGTTTTAGG+AGG | + | chr7.2:11161769-11161788 | MS.gene20060:intron | 40.0% |
| !! | GGCTTTTGGAGATAAAGGTA+GGG | + | chr7.2:11164278-11164297 | MS.gene20060:CDS | 40.0% |
| !! | TTGGTGGTGGATAATAACCA+GGG | - | chr7.2:11159449-11159468 | None:intergenic | 40.0% |
| AAAGGCGAATTAGGAAGGGA+TGG | + | chr7.2:11161120-11161139 | MS.gene20060:intron | 45.0% | |
| AACTCAAGCGGTGTTTGAGA+AGG | + | chr7.2:11163722-11163741 | MS.gene20060:CDS | 45.0% | |
| AAGAGGTGGAGAGTAAGAAG+TGG | + | chr7.2:11161010-11161029 | MS.gene20060:intron | 45.0% | |
| AAGCAGATCTTGTCGGTGAA+TGG | + | chr7.2:11163774-11163793 | MS.gene20060:CDS | 45.0% | |
| AAGGCGAATTAGGAAGGGAT+GGG | + | chr7.2:11161121-11161140 | MS.gene20060:intron | 45.0% | |
| AAGTGGAGAGGGTAGCTAAA+GGG | + | chr7.2:11161027-11161046 | MS.gene20060:intron | 45.0% | |
| AGCAAAGGGGGGTTACATTA+AGG | - | chr7.2:11162103-11162122 | None:intergenic | 45.0% | |
| AGTGAGATTGCGTGTGAGTT+GGG | + | chr7.2:11161210-11161229 | MS.gene20060:intron | 45.0% | |
| ATAGTTTCGCAGGCGCTATT+AGG | + | chr7.2:11161650-11161669 | MS.gene20060:intron | 45.0% | |
| ATCCTCATATGGATCCTGCT+TGG | + | chr7.2:11159487-11159506 | MS.gene20060:CDS | 45.0% | |
| ATTCAAGTGCTACAACTGCG+AGG | - | chr7.2:11162951-11162970 | None:intergenic | 45.0% | |
| ATTCAGCCAACCAGAACTTG+TGG | - | chr7.2:11162617-11162636 | None:intergenic | 45.0% | |
| CAACTGGTTGTCTGCAAATC+GGG | - | chr7.2:11164255-11164274 | None:intergenic | 45.0% | |
| CAGAAGTTTAGACAGCAAGC+TGG | + | chr7.2:11163546-11163565 | MS.gene20060:CDS | 45.0% | |
| CAGTGAAAGGCGAATTAGGA+AGG | + | chr7.2:11161115-11161134 | MS.gene20060:intron | 45.0% | |
| CATGAACCTATATGCGAAGG+AGG | + | chr7.2:11162995-11163014 | MS.gene20060:intron | 45.0% | |
| CATGATTTCGCTGCTATGTG+CGG | - | chr7.2:11161621-11161640 | None:intergenic | 45.0% | |
| CTCTTTGCTCTCCCATATCA+AGG | + | chr7.2:11163224-11163243 | MS.gene20060:intron | 45.0% | |
| CTTCGCATATAGGTTCATGC+CGG | - | chr7.2:11162994-11163013 | None:intergenic | 45.0% | |
| GACTACTAAAGAGGAAGAGG+TGG | + | chr7.2:11160996-11161015 | MS.gene20060:intron | 45.0% | |
| GCAAAGGGGGGTTACATTAA+GGG | - | chr7.2:11162102-11162121 | None:intergenic | 45.0% | |
| GCATCATCCGGTAATCATGA+TGG | + | chr7.2:11163657-11163676 | MS.gene20060:CDS | 45.0% | |
| GCCTCATCATCATCCTCATA+TGG | + | chr7.2:11159476-11159495 | MS.gene20060:CDS | 45.0% | |
| GCGGTGTTTGAGAAGGAAAA+AGG | + | chr7.2:11163729-11163748 | MS.gene20060:CDS | 45.0% | |
| GGAAAGCAACAGAACAGAGA+AGG | - | chr7.2:11161908-11161927 | None:intergenic | 45.0% | |
| GGTGACTACTAAAGAGGAAG+AGG | + | chr7.2:11160993-11161012 | MS.gene20060:intron | 45.0% | |
| GTACAATTCCAGCAAGGTCT+TGG | + | chr7.2:11163522-11163541 | MS.gene20060:CDS | 45.0% | |
| GTGACTGTACAATTCCAGCA+AGG | + | chr7.2:11163516-11163535 | MS.gene20060:CDS | 45.0% | |
| GTGTTTAGATATAGGGACGG+AGG | + | chr7.2:11162347-11162366 | MS.gene20060:intron | 45.0% | |
| GTTAATCTCATATAGCGGCG+TGG | - | chr7.2:11162533-11162552 | None:intergenic | 45.0% | |
| GTTGCAGTGAAAGGCGAATT+AGG | + | chr7.2:11161111-11161130 | MS.gene20060:intron | 45.0% | |
| TACAGTCACAGGTGCAAGAT+GGG | - | chr7.2:11163505-11163524 | None:intergenic | 45.0% | |
| TAGTGAGATTGCGTGTGAGT+TGG | + | chr7.2:11161209-11161228 | MS.gene20060:intron | 45.0% | |
| TAGTTTCGCAGGCGCTATTA+GGG | + | chr7.2:11161651-11161670 | MS.gene20060:intron | 45.0% | |
| TCACCTGATGAGGAAAATCC+TGG | + | chr7.2:11159627-11159646 | MS.gene20060:CDS | 45.0% | |
| TCCTCATATGGATCCTGCTT+GGG | + | chr7.2:11159488-11159507 | MS.gene20060:CDS | 45.0% | |
| TCCTTGACATGTGTCAACGA+CGG | - | chr7.2:11160294-11160313 | None:intergenic | 45.0% | |
| TCGTAGCAACAAACAGCAGA+AGG | - | chr7.2:11161855-11161874 | None:intergenic | 45.0% | |
| TCTTGTCGGTGAATGGAATG+CGG | + | chr7.2:11163781-11163800 | MS.gene20060:CDS | 45.0% | |
| TGCACAGAATCACATGGTTG+AGG | + | chr7.2:11160723-11160742 | MS.gene20060:intron | 45.0% | |
| TGCTGGAATTGTACAGTCAC+AGG | - | chr7.2:11163516-11163535 | None:intergenic | 45.0% | |
| TGGAGAGTAAGAAGTGGAGA+GGG | + | chr7.2:11161016-11161035 | MS.gene20060:intron | 45.0% | |
| TGTTTACCCTCTAGCAGTGA+AGG | + | chr7.2:11163629-11163648 | MS.gene20060:CDS | 45.0% | |
| TTCGCATATAGGTTCATGCC+GGG | - | chr7.2:11162993-11163012 | None:intergenic | 45.0% | |
| TTTAGACAGCAAGCTGGAAC+TGG | + | chr7.2:11163552-11163571 | MS.gene20060:CDS | 45.0% | |
| ! | AGGATGCTGCTCTGTTTTGT+TGG | + | chr7.2:11161945-11161964 | MS.gene20060:intron | 45.0% |
| ! | AGTCATCCACAAGTTCTGGT+TGG | + | chr7.2:11162608-11162627 | MS.gene20060:intron | 45.0% |
| ! | TGAGGATGATGATGAGGCAT+AGG | - | chr7.2:11159474-11159493 | None:intergenic | 45.0% |
| ! | TGATGCTCAACAAAAGGTGC+AGG | - | chr7.2:11159552-11159571 | None:intergenic | 45.0% |
| !! | CATGTGTAGTGGATGTGCAA+AGG | + | chr7.2:11164204-11164223 | MS.gene20060:CDS | 45.0% |
| !! | CGGGACTTTAGAAGCATTTG+TGG | - | chr7.2:11162974-11162993 | None:intergenic | 45.0% |
| !! | TGATGAGGCATAGGTATTGG+TGG | - | chr7.2:11159465-11159484 | None:intergenic | 45.0% |
| ACCCAAGCAGGATCCATATG+AGG | - | chr7.2:11159492-11159511 | None:intergenic | 50.0% | |
| ACCGTCGTTGACACATGTCA+AGG | + | chr7.2:11160290-11160309 | MS.gene20060:intron | 50.0% | |
| ACCTTTGATGCTGCCGTATC+TGG | + | chr7.2:11159669-11159688 | MS.gene20060:CDS | 50.0% | |
| ACTTCTGTCCAAGACCTTGC+TGG | - | chr7.2:11163533-11163552 | None:intergenic | 50.0% | |
| AGAAGGACACTTCACGCCAA+AGG | - | chr7.2:11161891-11161910 | None:intergenic | 50.0% | |
| AGGCGAATTAGGAAGGGATG+GGG | + | chr7.2:11161122-11161141 | MS.gene20060:intron | 50.0% | |
| AGGGGGGTTACATTAAGGGA+CGG | - | chr7.2:11162098-11162117 | None:intergenic | 50.0% | |
| ATGTTGTTCGCGGTATTCGG+AGG | + | chr7.2:11160119-11160138 | MS.gene20060:intron | 50.0% | |
| CATCTGCCTTCACTGCTAGA+GGG | - | chr7.2:11163638-11163657 | None:intergenic | 50.0% | |
| CCTTTGATGCTGCCGTATCT+GGG | + | chr7.2:11159670-11159689 | MS.gene20060:CDS | 50.0% | |
| CGCTCATACTGACGTGCATA+TGG | + | chr7.2:11160903-11160922 | MS.gene20060:intron | 50.0% | |
| CGGCATGAACCTATATGCGA+AGG | + | chr7.2:11162992-11163011 | MS.gene20060:intron | 50.0% | |
| CGGCTGATTGGAGAAAGAAG+GGG | + | chr7.2:11161152-11161171 | MS.gene20060:intron | 50.0% | |
| GAAGTGGAGAGGGTAGCTAA+AGG | + | chr7.2:11161026-11161045 | MS.gene20060:intron | 50.0% | |
| GCCAAAGTATGTCACGGACT+CGG | - | chr7.2:11164160-11164179 | None:intergenic | 50.0% | |
| GCCTGCGAAACTATCGAACA+GGG | - | chr7.2:11161644-11161663 | None:intergenic | 50.0% | |
| GCGGCTGATTGGAGAAAGAA+GGG | + | chr7.2:11161151-11161170 | MS.gene20060:intron | 50.0% | |
| GGAGATAAAGGTAGGGACTG+AGG | + | chr7.2:11164285-11164304 | MS.gene20060:CDS | 50.0% | |
| GGCCACTTCGTCTAGAGATA+CGG | - | chr7.2:11160421-11160440 | None:intergenic | 50.0% | |
| GGGTTACATTAAGGGACGGA+GGG | - | chr7.2:11162094-11162113 | None:intergenic | 50.0% | |
| GTACAGTCACAGGTGCAAGA+TGG | - | chr7.2:11163506-11163525 | None:intergenic | 50.0% | |
| GTGAAGGCAGATGCATCATC+CGG | + | chr7.2:11163645-11163664 | MS.gene20060:CDS | 50.0% | |
| GTGGAGAGTAAGAAGTGGAG+AGG | + | chr7.2:11161015-11161034 | MS.gene20060:intron | 50.0% | |
| GTTTCTCGGTACTACCCTTG+TGG | + | chr7.2:11159510-11159529 | MS.gene20060:CDS | 50.0% | |
| TCCGAGTCCGTGACATACTT+TGG | + | chr7.2:11164156-11164175 | MS.gene20060:intron | 50.0% | |
| TGCCGTATCTCTAGACGAAG+TGG | + | chr7.2:11160416-11160435 | MS.gene20060:intron | 50.0% | |
| TGGATCCTGCTTGGGTTTCT+CGG | + | chr7.2:11159496-11159515 | MS.gene20060:CDS | 50.0% | |
| TGTCAATCGCGCTGCTATAG+CGG | + | chr7.2:11161536-11161555 | MS.gene20060:intron | 50.0% | |
| ! | GGATGGGGAGGCATGTTAAA+AGG | + | chr7.2:11160048-11160067 | MS.gene20060:intron | 50.0% |
| ! | TAGTACCGAGAAACCCAAGC+AGG | - | chr7.2:11159504-11159523 | None:intergenic | 50.0% |
| !! | AGGTGCAAGATGGGTTACCT+TGG | - | chr7.2:11163496-11163515 | None:intergenic | 50.0% |
| !! | AGGTGCAGGTTGATTCACCA+CGG | - | chr7.2:11159538-11159557 | None:intergenic | 50.0% |
| !! | GCAAGATGGGTTACCTTGGT+CGG | - | chr7.2:11163492-11163511 | None:intergenic | 50.0% |
| !! | GGTTGGTGAGTTGCAGTGAA+AGG | + | chr7.2:11161102-11161121 | MS.gene20060:intron | 50.0% |
| !! | TGAGGCATAGGTATTGGTGG+TGG | - | chr7.2:11159462-11159481 | None:intergenic | 50.0% |
| ACTGAGCTAGCTACTTGGCG+CGG | + | chr7.2:11160349-11160368 | MS.gene20060:intron | 55.0% | |
| AGAAGGATGTGTCGCGGTCA+AGG | - | chr7.2:11161814-11161833 | None:intergenic | 55.0% | |
| AGCGTCTCACAGGACCAAGA+AGG | - | chr7.2:11161831-11161850 | None:intergenic | 55.0% | |
| CCCAGATACGGCAGCATCAA+AGG | - | chr7.2:11159673-11159692 | None:intergenic | 55.0% | |
| CGCACACTGAGCTAGCTACT+TGG | + | chr7.2:11160344-11160363 | MS.gene20060:intron | 55.0% | |
| CGCCTGCGAAACTATCGAAC+AGG | - | chr7.2:11161645-11161664 | None:intergenic | 55.0% | |
| GATTCACCACGGGTCCACAA+GGG | - | chr7.2:11159527-11159546 | None:intergenic | 55.0% | |
| GCATCTGCCTTCACTGCTAG+AGG | - | chr7.2:11163639-11163658 | None:intergenic | 55.0% | |
| GCCCTGTTCGATAGTTTCGC+AGG | + | chr7.2:11161640-11161659 | MS.gene20060:intron | 55.0% | |
| GGACCAAGAAGGATGTGTCG+CGG | - | chr7.2:11161820-11161839 | None:intergenic | 55.0% | |
| GGCGAATTAGGAAGGGATGG+GGG | + | chr7.2:11161123-11161142 | MS.gene20060:intron | 55.0% | |
| GGCGGCTGATTGGAGAAAGA+AGG | + | chr7.2:11161150-11161169 | MS.gene20060:intron | 55.0% | |
| GGGGTTACATTAAGGGACGG+AGG | - | chr7.2:11162095-11162114 | None:intergenic | 55.0% | |
| GGGTGAACAATTGTGTCGCG+AGG | - | chr7.2:11163903-11163922 | None:intergenic | 55.0% | |
| TGACCGCGACACATCCTTCT+TGG | + | chr7.2:11161814-11161833 | MS.gene20060:intron | 55.0% | |
| TGATTCACCACGGGTCCACA+AGG | - | chr7.2:11159528-11159547 | None:intergenic | 55.0% | |
| TGGAATGCGGTATGAGCTGC+AGG | + | chr7.2:11163794-11163813 | MS.gene20060:CDS | 55.0% | |
| TGTTCACCCCTGCCGACATA+TGG | + | chr7.2:11163914-11163933 | MS.gene20060:CDS | 55.0% | |
| TTAGGAAGGGATGGGGGAGA+TGG | + | chr7.2:11161129-11161148 | MS.gene20060:intron | 55.0% | |
| TTGATGCTGCCGTATCTGGG+AGG | + | chr7.2:11159673-11159692 | MS.gene20060:CDS | 55.0% | |
| TTGTTCGCGGTATTCGGAGG+TGG | + | chr7.2:11160122-11160141 | MS.gene20060:intron | 55.0% | |
| !! | AGCAGAAGGAAGCGTCTCAC+AGG | - | chr7.2:11161841-11161860 | None:intergenic | 55.0% |
| !! | CTGCTATAGCGGACAATCGC+GGG | + | chr7.2:11161547-11161566 | MS.gene20060:intron | 55.0% |
| !! | GCTGCTATAGCGGACAATCG+CGG | + | chr7.2:11161546-11161565 | MS.gene20060:intron | 55.0% |
| !! | GGTGCAGGTTGATTCACCAC+GGG | - | chr7.2:11159537-11159556 | None:intergenic | 55.0% |
| CTGCATCCTCACACCGACCA+AGG | + | chr7.2:11163476-11163495 | MS.gene20060:CDS | 60.0% | |
| GGGTTACCTTGGTCGGTGTG+AGG | - | chr7.2:11163485-11163504 | None:intergenic | 60.0% | |
| GTACTACCCTTGTGGACCCG+TGG | + | chr7.2:11159518-11159537 | MS.gene20060:CDS | 60.0% | |
| ! | GCGTGTGAGTTGGGCCGAAA+AGG | + | chr7.2:11161219-11161238 | MS.gene20060:intron | 60.0% |
| GGAAGGGATGGGGGAGATGG+CGG | + | chr7.2:11161132-11161151 | MS.gene20060:intron | 65.0% | |
| ! | TGGGGGAGATGGCGGCTGAT+TGG | + | chr7.2:11161140-11161159 | MS.gene20060:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 11159423 | 11164312 | 11159423 | ID=MS.gene20060 |
| chr7.2 | mRNA | 11159423 | 11164312 | 11159423 | ID=MS.gene20060.t1;Parent=MS.gene20060 |
| chr7.2 | exon | 11159423 | 11159694 | 11159423 | ID=MS.gene20060.t1.exon1;Parent=MS.gene20060.t1 |
| chr7.2 | CDS | 11159423 | 11159694 | 11159423 | ID=cds.MS.gene20060.t1;Parent=MS.gene20060.t1 |
| chr7.2 | exon | 11163440 | 11163935 | 11163440 | ID=MS.gene20060.t1.exon2;Parent=MS.gene20060.t1 |
| chr7.2 | CDS | 11163440 | 11163935 | 11163440 | ID=cds.MS.gene20060.t1;Parent=MS.gene20060.t1 |
| chr7.2 | exon | 11164202 | 11164312 | 11164202 | ID=MS.gene20060.t1.exon3;Parent=MS.gene20060.t1 |
| chr7.2 | CDS | 11164202 | 11164312 | 11164202 | ID=cds.MS.gene20060.t1;Parent=MS.gene20060.t1 |
| Gene Sequence |
| Protein sequence |
