Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20140.t1 | XP_003630686.1 | 97.3 | 510 | 14 | 0 | 1 | 510 | 1 | 510 | 1.70E-273 | 951.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20140.t1 | P29677 | 73.1 | 510 | 131 | 2 | 1 | 510 | 1 | 504 | 1.4e-207 | 723.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20140.t1 | G7L7C9 | 97.3 | 510 | 14 | 0 | 1 | 510 | 1 | 510 | 1.2e-273 | 951.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20140 | MS.gene35670 | PPI |
| MS.gene20140 | MS.gene023018 | PPI |
| MS.gene70673 | MS.gene20140 | PPI |
| MS.gene20140 | MS.gene56912 | PPI |
| MS.gene20140 | MS.gene48333 | PPI |
| MS.gene20140 | MS.gene033288 | PPI |
| MS.gene20140 | MS.gene24749 | PPI |
| MS.gene20140 | MS.gene027331 | PPI |
| MS.gene20140 | MS.gene022347 | PPI |
| MS.gene20140 | MS.gene011327 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20140.t1 | MTR_8g102230 | 98.627 | 510 | 7 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1030 |
| MS.gene20140.t1 | MTR_8g014660 | 71.176 | 510 | 144 | 1 | 1 | 510 | 1 | 507 | 0.0 | 724 |
| MS.gene20140.t1 | MTR_7g053330 | 32.071 | 449 | 278 | 16 | 69 | 500 | 82 | 520 | 8.32e-61 | 209 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20140.t1 | AT1G51980 | 65.551 | 508 | 170 | 4 | 1 | 508 | 1 | 503 | 0.0 | 645 |
| MS.gene20140.t1 | AT3G16480 | 68.874 | 453 | 139 | 2 | 56 | 508 | 49 | 499 | 0.0 | 620 |
| MS.gene20140.t1 | AT1G51980 | 65.275 | 455 | 153 | 4 | 1 | 455 | 1 | 450 | 0.0 | 568 |
| MS.gene20140.t1 | AT3G02090 | 31.377 | 443 | 279 | 14 | 80 | 510 | 96 | 525 | 7.17e-58 | 201 |
| MS.gene20140.t1 | AT3G02090 | 32.126 | 414 | 261 | 12 | 80 | 482 | 96 | 500 | 5.44e-56 | 196 |
Find 134 sgRNAs with CRISPR-Local
Find 471 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCTGTGTATACTGATTT+TGG | 0.186959 | 4.4:+3631940 | None:intergenic |
| TCTGCTTTAGGTGGTTTATT+TGG | 0.229094 | 4.4:-3634112 | MS.gene20140:CDS |
| CTTCACGCCTTAGAGCTTTC+AGG | 0.230620 | 4.4:-3634498 | MS.gene20140:CDS |
| CCTCTAGATTTCCCACTTCC+TGG | 0.252710 | 4.4:-3634055 | MS.gene20140:CDS |
| ATTCTCACAGTTGCCACTTC+TGG | 0.252866 | 4.4:-3628456 | MS.gene20140:CDS |
| TATGAGACCCCATTAACTTT+TGG | 0.282250 | 4.4:-3633739 | MS.gene20140:CDS |
| GCTCTGGCATTTGAACTTCC+TGG | 0.297177 | 4.4:-3631772 | MS.gene20140:CDS |
| ACAAGCAACTCCACCATTTC+AGG | 0.304283 | 4.4:+3633559 | None:intergenic |
| TTTAGGCTCGTTCGTGCAAT+AGG | 0.306233 | 4.4:-3634192 | MS.gene20140:intron |
| TCAGCAGTAAATAGACTAAA+TGG | 0.315220 | 4.4:-3632231 | MS.gene20140:CDS |
| CGAATAGTACTTGCAGCTTC+TGG | 0.330623 | 4.4:-3632039 | MS.gene20140:CDS |
| GGATTCCAAATTCATCAAAA+TGG | 0.331765 | 4.4:+3628283 | None:intergenic |
| AAACAATCCTCGTCTGCTTT+AGG | 0.338691 | 4.4:-3634124 | MS.gene20140:CDS |
| TTACATAATTCAGATGCTAT+TGG | 0.340743 | 4.4:-3631561 | MS.gene20140:intron |
| GTTCAAATGCCAGAGCAAAA+TGG | 0.340749 | 4.4:+3631779 | None:intergenic |
| TACATAATTCAGATGCTATT+GGG | 0.340761 | 4.4:-3631560 | MS.gene20140:intron |
| AGAACTTGAACTTGCAAATC+TGG | 0.344149 | 4.4:+3634156 | None:intergenic |
| GAGGCGACTTTAACTCCATT+TGG | 0.349938 | 4.4:+3633968 | None:intergenic |
| TATCGTTGTCAAAGTGAAAC+AGG | 0.356292 | 4.4:-3631913 | MS.gene20140:CDS |
| ATTTGGGAGCGTAGTAATAA+TGG | 0.364186 | 4.4:+3633985 | None:intergenic |
| GGAACCCTGCGTTTCTTGAT+TGG | 0.370363 | 4.4:-3633525 | MS.gene20140:CDS |
| CTCAGCTTCTAGAGAGCAAA+TGG | 0.370717 | 4.4:-3633614 | MS.gene20140:CDS |
| CTTTAGGTGGTTTATTTGGA+TGG | 0.371121 | 4.4:-3634108 | MS.gene20140:CDS |
| GTGTAGCCCCAAAAGTTAAT+GGG | 0.373375 | 4.4:+3633731 | None:intergenic |
| TACTAACCCTGAAAGCTCTA+AGG | 0.383892 | 4.4:+3634491 | None:intergenic |
| TGTGTAGCCCCAAAAGTTAA+TGG | 0.385100 | 4.4:+3633730 | None:intergenic |
| GGCAGATTTCGTAGCTTGTT+TGG | 0.386723 | 4.4:+3628304 | None:intergenic |
| CAGTCTCCTGCTGCTTCAAT+AGG | 0.390652 | 4.4:-3633787 | MS.gene20140:CDS |
| CAGCTGGTGGGCCTGGTAAA+GGG | 0.394120 | 4.4:-3631520 | MS.gene20140:CDS |
| GAACCCTGCGTTTCTTGATT+GGG | 0.398292 | 4.4:-3633524 | MS.gene20140:CDS |
| TTCCCAGGCGCTACATGATC+AGG | 0.400517 | 4.4:+3634010 | None:intergenic |
| AGGCGACTTTAACTCCATTT+GGG | 0.408007 | 4.4:+3633969 | None:intergenic |
| GTTCGGGAGGTGGAGGCAAT+TGG | 0.414574 | 4.4:-3633652 | MS.gene20140:CDS |
| TCAGCTGGTGGGCCTGGTAA+AGG | 0.414881 | 4.4:-3631521 | MS.gene20140:CDS |
| CCTGTTTACAGTGGTCTTGA+AGG | 0.419039 | 4.4:+3633690 | None:intergenic |
| AAACCCTCAAGACTTGCTAT+TGG | 0.423179 | 4.4:-3632313 | MS.gene20140:CDS |
| TTCACGCCTTAGAGCTTTCA+GGG | 0.423821 | 4.4:-3634497 | MS.gene20140:intron |
| TTCAAATGCCAGAGCAAAAT+GGG | 0.424354 | 4.4:+3631780 | None:intergenic |
| CTGCTCACTGATTCGTAGCT+TGG | 0.426370 | 4.4:+3627683 | None:intergenic |
| TTGGAGGCAATTCATTCTGC+TGG | 0.430435 | 4.4:-3632294 | MS.gene20140:CDS |
| TCATTCTCAGCTGGTGGGCC+TGG | 0.430849 | 4.4:-3631527 | MS.gene20140:CDS |
| AACAATATTTACAATAATAC+CGG | 0.433486 | 4.4:-3631148 | MS.gene20140:CDS |
| CATTTGAACTTCCTGGCGGC+TGG | 0.435621 | 4.4:-3631765 | MS.gene20140:CDS |
| GCTTTCGTTTGCAGTTGATC+AGG | 0.443499 | 4.4:-3628342 | MS.gene20140:intron |
| ACGTGGAACACTGGGTAAAT+CGG | 0.446147 | 4.4:+3631972 | None:intergenic |
| CCTTCAAGACCACTGTAAAC+AGG | 0.448500 | 4.4:-3633690 | MS.gene20140:CDS |
| TGGCGGCTGGCATAACTTGA+AGG | 0.449075 | 4.4:-3631752 | MS.gene20140:CDS |
| TCCACAAGTTCATTCGATAT+CGG | 0.450885 | 4.4:-3631176 | MS.gene20140:CDS |
| GAAGACCTATGTTCCTGAAA+TGG | 0.455623 | 4.4:-3633572 | MS.gene20140:CDS |
| TTGCCTGATCATGTAGCGCC+TGG | 0.456505 | 4.4:-3634013 | MS.gene20140:CDS |
| ATGGTTGTTTCAGAAGATAT+AGG | 0.461616 | 4.4:-3628061 | MS.gene20140:CDS |
| CCTCCAATAGCAAGTCTTGA+GGG | 0.463091 | 4.4:+3632310 | None:intergenic |
| CCTCTCACAATGGCATCATA+TGG | 0.464688 | 4.4:-3627805 | MS.gene20140:CDS |
| CTGAAAGTGAAGGCTGAGAT+TGG | 0.468579 | 4.4:-3632348 | MS.gene20140:CDS |
| GACAGAAGAAGTGGATGATC+CGG | 0.481212 | 4.4:+3634081 | None:intergenic |
| GGGCTACACATTTGCTCGAA+CGG | 0.481223 | 4.4:-3633717 | MS.gene20140:CDS |
| TCGTGTGGTTCGGGAGGTGG+AGG | 0.481573 | 4.4:-3633659 | MS.gene20140:CDS |
| CTCATTAGCTGCAATATCAA+TGG | 0.483463 | 4.4:+3628479 | None:intergenic |
| GGCAATTGGTGGCAATGTGC+AGG | 0.489712 | 4.4:-3633638 | MS.gene20140:CDS |
| CTCTTCAGGACGTGGAACAC+TGG | 0.491349 | 4.4:+3631963 | None:intergenic |
| CGCGAATACATCCCTTTACC+AGG | 0.496570 | 4.4:+3631509 | None:intergenic |
| CCCTCAAGACTTGCTATTGG+AGG | 0.497371 | 4.4:-3632310 | MS.gene20140:CDS |
| ATTATTACTACGCTCCCAAA+TGG | 0.498784 | 4.4:-3633983 | MS.gene20140:CDS |
| CCCTGCGTTTCTTGATTGGG+AGG | 0.507845 | 4.4:-3633521 | MS.gene20140:CDS |
| TTAGGCTCGTTCGTGCAATA+GGG | 0.512338 | 4.4:-3634191 | MS.gene20140:intron |
| GGTGGATCATTCTCAGCTGG+TGG | 0.512878 | 4.4:-3631533 | MS.gene20140:CDS |
| GGAAGTGTAACACCAGGAAG+TGG | 0.514628 | 4.4:+3634043 | None:intergenic |
| CGGGAGGTGGAGGCAATTGG+TGG | 0.515419 | 4.4:-3633649 | MS.gene20140:CDS |
| GGTTTATTTGGATGGCTCAC+CGG | 0.515600 | 4.4:-3634100 | MS.gene20140:CDS |
| GGCGGTGGATCATTCTCAGC+TGG | 0.517181 | 4.4:-3631536 | MS.gene20140:CDS |
| GCATAACTTGAAGGATGCTA+TGG | 0.518450 | 4.4:-3631743 | MS.gene20140:CDS |
| GAAGCTGCAAGTACTATTCG+AGG | 0.520541 | 4.4:+3632042 | None:intergenic |
| TGAAGAAACGTTCCTGTACA+TGG | 0.522192 | 4.4:+3634516 | None:intergenic |
| GCTGATTCTGAAGCTAAAAG+AGG | 0.522365 | 4.4:+3632249 | None:intergenic |
| ACATGATCAGGCAATGGAGC+GGG | 0.525018 | 4.4:+3634022 | None:intergenic |
| TTCAAGTTATGCCAGCCGCC+AGG | 0.525656 | 4.4:+3631754 | None:intergenic |
| TAAATCGGACAAAAGAGGTT+CGG | 0.527264 | 4.4:+3631987 | None:intergenic |
| TGATTGGGAGGTCAATGAGC+AGG | 0.535046 | 4.4:-3633509 | MS.gene20140:intron |
| GCCGATATCGAATGAACTTG+TGG | 0.536829 | 4.4:+3631175 | None:intergenic |
| TCGATTCATTCACCATGTAC+AGG | 0.537766 | 4.4:-3634528 | None:intergenic |
| AGGGACTTACTGTTGTGACT+TGG | 0.538586 | 4.4:+3631113 | None:intergenic |
| TATAGACCTATTGAAGCAGC+AGG | 0.539149 | 4.4:+3633781 | None:intergenic |
| AGCAGACGAGGATTGTTTCG+AGG | 0.541779 | 4.4:+3634129 | None:intergenic |
| TACACATTTGCTCGAACGGA+TGG | 0.542154 | 4.4:-3633713 | MS.gene20140:CDS |
| CTGGTAAAGGGATGTATTCG+CGG | 0.542817 | 4.4:-3631508 | MS.gene20140:CDS |
| CAATGTACCTTGTCCAGAAG+TGG | 0.546813 | 4.4:+3628443 | None:intergenic |
| GTGGATCATTCTCAGCTGGT+GGG | 0.548891 | 4.4:-3631532 | MS.gene20140:CDS |
| CAATCCTCGTCTGCTTTAGG+TGG | 0.549840 | 4.4:-3634121 | MS.gene20140:CDS |
| AGTGGACGAAGTAACTTTGA+AGG | 0.562537 | 4.4:-3627863 | MS.gene20140:CDS |
| CTTGCAAATCTGGTAGTGGC+AGG | 0.563200 | 4.4:+3634166 | None:intergenic |
| TCTTCAGGACGTGGAACACT+GGG | 0.569641 | 4.4:+3631964 | None:intergenic |
| TGAACTTGCAAATCTGGTAG+TGG | 0.570423 | 4.4:+3634162 | None:intergenic |
| TATGTAGCTTCTGAAAGTGA+AGG | 0.570547 | 4.4:-3632358 | MS.gene20140:intron |
| GCCTCCAATAGCAAGTCTTG+AGG | 0.576645 | 4.4:+3632309 | None:intergenic |
| CATTTCGTCACCTCTCACAA+TGG | 0.577598 | 4.4:-3627815 | MS.gene20140:CDS |
| CTCCACCATTTCAGGAACAT+AGG | 0.580519 | 4.4:+3633567 | None:intergenic |
| ACCTCCCAATCAAGAAACGC+AGG | 0.581477 | 4.4:+3633520 | None:intergenic |
| CTGGGTAAATCGGACAAAAG+AGG | 0.582618 | 4.4:+3631982 | None:intergenic |
| CAGATGCTATTGGGAGGCGG+TGG | 0.582698 | 4.4:-3631551 | MS.gene20140:CDS |
| AGCTTCTGGTGTTGAGCATG+AGG | 0.584438 | 4.4:-3632025 | MS.gene20140:CDS |
| TAGAGGTGGGACAGAAGAAG+TGG | 0.588518 | 4.4:+3634072 | None:intergenic |
| GGCGCTACATGATCAGGCAA+TGG | 0.589582 | 4.4:+3634016 | None:intergenic |
| TGCCTGATCATGTAGCGCCT+GGG | 0.591064 | 4.4:-3634012 | MS.gene20140:CDS |
| GGACAAAAGAGGTTCGGCAA+TGG | 0.592591 | 4.4:+3631993 | None:intergenic |
| ACAATGGCATCATATGGAGA+TGG | 0.608918 | 4.4:-3627799 | MS.gene20140:intron |
| TCATACCGGTGATGTTTCAG+AGG | 0.611414 | 4.4:+3633949 | None:intergenic |
| ACAGTTGCCACTTCTGGACA+AGG | 0.624060 | 4.4:-3628450 | MS.gene20140:intron |
| GATAATCAAGACCTGAAGAA+CGG | 0.625024 | 4.4:+3631714 | None:intergenic |
| TCAGCTTCTAGAGAGCAAAT+GGG | 0.627001 | 4.4:-3633613 | MS.gene20140:CDS |
| GGAAGTGGGAAATCTAGAGG+TGG | 0.628061 | 4.4:+3634058 | None:intergenic |
| CATTTGCTCTCTAGAAGCTG+AGG | 0.630139 | 4.4:+3633615 | None:intergenic |
| CCAGGAAGTGGGAAATCTAG+AGG | 0.630653 | 4.4:+3634055 | None:intergenic |
| ATTCAGATGCTATTGGGAGG+CGG | 0.630948 | 4.4:-3631554 | MS.gene20140:intron |
| GACCTATGTTCCTGAAATGG+TGG | 0.631367 | 4.4:-3633569 | MS.gene20140:CDS |
| AGTCGCCTCTGAAACATCAC+CGG | 0.632879 | 4.4:-3633954 | MS.gene20140:intron |
| GAAGTGGGAAATCTAGAGGT+GGG | 0.637022 | 4.4:+3634059 | None:intergenic |
| AGTTGCTTGTTGATATTGTG+AGG | 0.637501 | 4.4:-3633546 | MS.gene20140:CDS |
| ATCGTTGTCAAAGTGAAACA+GGG | 0.638854 | 4.4:-3631912 | MS.gene20140:CDS |
| TACATGATCAGGCAATGGAG+CGG | 0.640929 | 4.4:+3634021 | None:intergenic |
| CCATATGATGCCATTGTGAG+AGG | 0.648207 | 4.4:+3627805 | None:intergenic |
| AGCTAAAAGAGGATTAGCCA+AGG | 0.651532 | 4.4:+3632260 | None:intergenic |
| TGTAGCCCCAAAAGTTAATG+GGG | 0.658605 | 4.4:+3633732 | None:intergenic |
| GAAGTGTAACACCAGGAAGT+GGG | 0.664342 | 4.4:+3634044 | None:intergenic |
| GGAGCGGGAAGTGTAACACC+AGG | 0.669770 | 4.4:+3634037 | None:intergenic |
| GAGCCAAAATCAGTATACAC+AGG | 0.672733 | 4.4:-3631943 | MS.gene20140:CDS |
| GTCCTTACTCAGGAAACCTG+TGG | 0.672973 | 4.4:-3627902 | MS.gene20140:intron |
| CCTCCCAATCAAGAAACGCA+GGG | 0.677811 | 4.4:+3633521 | None:intergenic |
| ATAATTCAGATGCTATTGGG+AGG | 0.684827 | 4.4:-3631557 | MS.gene20140:intron |
| TAAACCACCTAAAGCAGACG+AGG | 0.687764 | 4.4:+3634117 | None:intergenic |
| CCAAAATCAGTATACACAGG+TGG | 0.699521 | 4.4:-3631940 | MS.gene20140:CDS |
| ATAGGTCTATATGTAGACTG+TGG | 0.700595 | 4.4:-3633769 | MS.gene20140:CDS |
| AAAATGACTCCTGTTTACAG+TGG | 0.720128 | 4.4:+3633681 | None:intergenic |
| TCGTTGTCAAAGTGAAACAG+GGG | 0.731053 | 4.4:-3631911 | MS.gene20140:intron |
| CTGGCATTTGAACTTCCTGG+CGG | 0.735748 | 4.4:-3631769 | MS.gene20140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATATAAAATATTT+GGG | + | chr4.4:3627746-3627765 | None:intergenic | 0.0% |
| !! | TAAAAAAAATATAAAATATT+TGG | + | chr4.4:3627747-3627766 | None:intergenic | 0.0% |
| !!! | TTAATTTTTTTTTTTAAAAA+TGG | + | chr4.4:3630775-3630794 | None:intergenic | 0.0% |
| !! | AATGATAATTAAGAAATAAA+AGG | - | chr4.4:3631865-3631884 | MS.gene20140:intron | 10.0% |
| !! | ATGATAATTAAGAAATAAAA+GGG | - | chr4.4:3631866-3631885 | MS.gene20140:intron | 10.0% |
| !! | TTATTCTCATTTATATATTA+GGG | - | chr4.4:3633656-3633675 | MS.gene20140:CDS | 10.0% |
| !! | TTGATAAAAAAAAAAAAAGT+GGG | - | chr4.4:3633177-3633196 | MS.gene20140:intron | 10.0% |
| !!! | ATACATATTTTATATTTCTT+AGG | + | chr4.4:3630911-3630930 | None:intergenic | 10.0% |
| !!! | TACATATTTTATATTTCTTA+GGG | + | chr4.4:3630910-3630929 | None:intergenic | 10.0% |
| !!! | TAGATTTAAAATTTATCATA+AGG | - | chr4.4:3627895-3627914 | MS.gene20140:intron | 10.0% |
| !! | AAATGATAATTAAGAAATAC+AGG | - | chr4.4:3631989-3632008 | MS.gene20140:CDS | 15.0% |
| !! | AACAATATTTACAATAATAC+CGG | - | chr4.4:3631030-3631049 | MS.gene20140:intron | 15.0% |
| !! | AATTTAATCAATCAAATTTG+TGG | - | chr4.4:3632472-3632491 | MS.gene20140:intron | 15.0% |
| !! | CTAATATATAAATGAGAATA+AGG | + | chr4.4:3633657-3633676 | None:intergenic | 15.0% |
| !! | CTTATTCTCATTTATATATT+AGG | - | chr4.4:3633655-3633674 | MS.gene20140:CDS | 15.0% |
| !! | CTTGATAAAAAAAAAAAAAG+TGG | - | chr4.4:3633176-3633195 | MS.gene20140:intron | 15.0% |
| !! | GAAATATTTATAATGAAGTA+TGG | - | chr4.4:3631616-3631635 | MS.gene20140:intron | 15.0% |
| !! | GATAAAACTTGAAAAAAATT+AGG | - | chr4.4:3632389-3632408 | MS.gene20140:intron | 15.0% |
| !! | TAACATGACAAAAAATATAA+TGG | - | chr4.4:3632142-3632161 | MS.gene20140:intron | 15.0% |
| !! | TGTAACAATTAAAAATTTGA+GGG | - | chr4.4:3632869-3632888 | MS.gene20140:intron | 15.0% |
| !! | TTGTAACAATTAAAAATTTG+AGG | - | chr4.4:3632868-3632887 | MS.gene20140:intron | 15.0% |
| !!! | AAACATCAATTTTTATTGAA+AGG | + | chr4.4:3632087-3632106 | None:intergenic | 15.0% |
| !!! | ACATATTTTATATTTCTTAG+GGG | + | chr4.4:3630909-3630928 | None:intergenic | 15.0% |
| !!! | ATCTAATTTTGTAAAATATC+AGG | - | chr4.4:3630099-3630118 | MS.gene20140:intron | 15.0% |
| !!! | ATGATTGTTTTTTTATTTCA+TGG | - | chr4.4:3633513-3633532 | MS.gene20140:CDS | 15.0% |
| !!! | ATGTTTTTATACTTCTAAAT+CGG | - | chr4.4:3632101-3632120 | MS.gene20140:intron | 15.0% |
| !!! | CATAGTTTCTATTATATTTT+TGG | + | chr4.4:3632918-3632937 | None:intergenic | 15.0% |
| !!! | TATTTTTCATTTAAACATCT+GGG | - | chr4.4:3632296-3632315 | MS.gene20140:CDS | 15.0% |
| !!! | TTAAAGAAATTTTAATTGGT+GGG | - | chr4.4:3632427-3632446 | MS.gene20140:intron | 15.0% |
| !!! | TTATTTTTCATTTAAACATC+TGG | - | chr4.4:3632295-3632314 | MS.gene20140:CDS | 15.0% |
| !!! | TTTAAAGAAATTTTAATTGG+TGG | - | chr4.4:3632426-3632445 | MS.gene20140:intron | 15.0% |
| !! | AAAATATAAAATATTTGGGG+AGG | + | chr4.4:3627742-3627761 | None:intergenic | 20.0% |
| !! | AAATAAAATAATTCCAACCA+AGG | + | chr4.4:3631817-3631836 | None:intergenic | 20.0% |
| !! | AAATAATATGGAGTCATATA+CGG | + | chr4.4:3630836-3630855 | None:intergenic | 20.0% |
| !! | AAGAAAAACAAGAAAAATCA+AGG | + | chr4.4:3632263-3632282 | None:intergenic | 20.0% |
| !! | AATCTATTGTCTAATATGTT+CGG | + | chr4.4:3633380-3633399 | None:intergenic | 20.0% |
| !! | CATGTATCACTAATATTTAA+AGG | - | chr4.4:3631840-3631859 | MS.gene20140:intron | 20.0% |
| !! | GATTCATGAATTTGTATATA+GGG | + | chr4.4:3627780-3627799 | None:intergenic | 20.0% |
| !! | GTTACAATTATATAGTGTAT+AGG | - | chr4.4:3631447-3631466 | MS.gene20140:intron | 20.0% |
| !! | TAAAAAAAAAAAAAGTGGGA+AGG | - | chr4.4:3633181-3633200 | MS.gene20140:intron | 20.0% |
| !! | TAATAAAAACAAGGATGTTA+AGG | + | chr4.4:3630953-3630972 | None:intergenic | 20.0% |
| !! | TAATATATCTCTTAGAATCA+TGG | + | chr4.4:3628948-3628967 | None:intergenic | 20.0% |
| !! | TAATCTAAATAAATGAACCA+CGG | + | chr4.4:3631377-3631396 | None:intergenic | 20.0% |
| !! | TAGATACTCTATAACTTTAT+CGG | - | chr4.4:3629590-3629609 | MS.gene20140:intron | 20.0% |
| !! | TGATTCATGAATTTGTATAT+AGG | + | chr4.4:3627781-3627800 | None:intergenic | 20.0% |
| !! | TTAATTGCTTTATATAACGA+TGG | - | chr4.4:3629629-3629648 | MS.gene20140:intron | 20.0% |
| !! | TTTGCCTAAAAAAGTAAATA+GGG | - | chr4.4:3631556-3631575 | MS.gene20140:intron | 20.0% |
| !!! | AAATAGTGTTAATTTTCACA+TGG | + | chr4.4:3633280-3633299 | None:intergenic | 20.0% |
| !!! | AGATATTGGAATTTTTATGT+TGG | - | chr4.4:3631108-3631127 | MS.gene20140:intron | 20.0% |
| !!! | ATATCTCTATTTTTTCAGTT+AGG | - | chr4.4:3630330-3630349 | MS.gene20140:intron | 20.0% |
| !!! | ATTTTGATTATGTGTGATTT+TGG | - | chr4.4:3632193-3632212 | MS.gene20140:intron | 20.0% |
| !!! | CATATTTTATATTTCTTAGG+GGG | + | chr4.4:3630908-3630927 | None:intergenic | 20.0% |
| !!! | GGGTTTAAAGAAATTTTAAT+TGG | - | chr4.4:3632423-3632442 | MS.gene20140:intron | 20.0% |
| !!! | TATCTCTATTTTTTCAGTTA+GGG | - | chr4.4:3630331-3630350 | MS.gene20140:intron | 20.0% |
| !!! | TGTCTAATAGTTTTTTATTG+TGG | - | chr4.4:3627951-3627970 | MS.gene20140:intron | 20.0% |
| !!! | TTCAACTAATATTCTTTTAG+TGG | - | chr4.4:3633399-3633418 | MS.gene20140:intron | 20.0% |
| !!! | TTTTGCCTAAAAAAGTAAAT+AGG | - | chr4.4:3631555-3631574 | MS.gene20140:intron | 20.0% |
| ! | AAAAATTAGGATGTGAGATT+AGG | - | chr4.4:3632402-3632421 | MS.gene20140:intron | 25.0% |
| ! | AAAATTAGGATGTGAGATTA+GGG | - | chr4.4:3632403-3632422 | MS.gene20140:intron | 25.0% |
| ! | AAATGGTGATAGTTATTCTT+TGG | - | chr4.4:3629434-3629453 | MS.gene20140:intron | 25.0% |
| ! | AAATTCCAATATCTCCAATA+TGG | + | chr4.4:3631102-3631121 | None:intergenic | 25.0% |
| ! | AAGTAAACATTCATTTGAGA+TGG | + | chr4.4:3633934-3633953 | None:intergenic | 25.0% |
| ! | AATAATATGGAGTCATATAC+GGG | + | chr4.4:3630835-3630854 | None:intergenic | 25.0% |
| ! | AATTCCAATATCTCCAATAT+GGG | + | chr4.4:3631101-3631120 | None:intergenic | 25.0% |
| ! | ACAGGCAAATAAATCAAAAT+TGG | - | chr4.4:3632007-3632026 | MS.gene20140:CDS | 25.0% |
| ! | ATAACAGCAGAAAAATCAAA+AGG | + | chr4.4:3629786-3629805 | None:intergenic | 25.0% |
| ! | ATAATGAAGTATGGAAGAAA+TGG | - | chr4.4:3631625-3631644 | MS.gene20140:intron | 25.0% |
| ! | ATCTCAAATGAATGTTTACT+TGG | - | chr4.4:3633933-3633952 | MS.gene20140:intron | 25.0% |
| ! | ATCTGCAAGTAATAAAAACA+AGG | + | chr4.4:3630962-3630981 | None:intergenic | 25.0% |
| ! | CACACATAATCAAAATCAAA+GGG | + | chr4.4:3632189-3632208 | None:intergenic | 25.0% |
| ! | CTTGATTATCACGTTTAAAT+TGG | - | chr4.4:3633785-3633804 | MS.gene20140:CDS | 25.0% |
| ! | GAATTTGAGAGATGAATAAA+TGG | - | chr4.4:3632513-3632532 | MS.gene20140:intron | 25.0% |
| ! | GTTACATTACCTATAAACAT+TGG | + | chr4.4:3631134-3631153 | None:intergenic | 25.0% |
| ! | GTTTATAGGTAATGTAACTA+AGG | - | chr4.4:3631136-3631155 | MS.gene20140:CDS | 25.0% |
| ! | TACATAATTCAGATGCTATT+GGG | - | chr4.4:3630618-3630637 | MS.gene20140:intron | 25.0% |
| ! | TCACACATAATCAAAATCAA+AGG | + | chr4.4:3632190-3632209 | None:intergenic | 25.0% |
| ! | TTACATAATTCAGATGCTAT+TGG | - | chr4.4:3630617-3630636 | MS.gene20140:intron | 25.0% |
| ! | TTATATGTAACTGACTAACT+AGG | + | chr4.4:3630808-3630827 | None:intergenic | 25.0% |
| ! | TTTACCTCTTGTGTAAAATA+GGG | + | chr4.4:3631971-3631990 | None:intergenic | 25.0% |
| ! | TTTGTTAGTTACAGATATGA+TGG | + | chr4.4:3633432-3633451 | None:intergenic | 25.0% |
| !! | ACAATTTTTCCTTAAAGCAA+TGG | + | chr4.4:3628839-3628858 | None:intergenic | 25.0% |
| !! | ACCATTTAAAGTTTAAACCA+CGG | + | chr4.4:3629421-3629440 | None:intergenic | 25.0% |
| !! | ATACAGAAAGGATCAAATTT+TGG | + | chr4.4:3633349-3633368 | None:intergenic | 25.0% |
| !! | ATTGAAAAGTGTAGCATTTA+AGG | - | chr4.4:3632038-3632057 | MS.gene20140:CDS | 25.0% |
| !! | CAATTTTTCCTTAAAGCAAT+GGG | + | chr4.4:3628838-3628857 | None:intergenic | 25.0% |
| !! | TTAATGTATTCAGTCTTTTC+TGG | - | chr4.4:3630707-3630726 | MS.gene20140:intron | 25.0% |
| !! | TTATTACTATCTGATTCGTA+CGG | - | chr4.4:3634076-3634095 | MS.gene20140:CDS | 25.0% |
| !! | TTTTACCTCTTGTGTAAAAT+AGG | + | chr4.4:3631972-3631991 | None:intergenic | 25.0% |
| !! | TTTTGGACAAGAAAAAACTT+CGG | + | chr4.4:3633332-3633351 | None:intergenic | 25.0% |
| !!! | ATGTCATTTCAAAAAGTACT+TGG | - | chr4.4:3634180-3634199 | MS.gene20140:CDS | 25.0% |
| !!! | ATGTCCCTATTTACTTTTTT+AGG | + | chr4.4:3631563-3631582 | None:intergenic | 25.0% |
| !!! | GCACACTATATTTTTTCAAT+TGG | + | chr4.4:3633001-3633020 | None:intergenic | 25.0% |
| !!! | TGGCTTATTTTTTACTCTTT+TGG | - | chr4.4:3632162-3632181 | MS.gene20140:intron | 25.0% |
| !!! | TTTTTTAGTAGGTAAAACGT+GGG | - | chr4.4:3633026-3633045 | MS.gene20140:intron | 25.0% |
| !!! | TTTTTTATCAAGTAGCTTAG+TGG | + | chr4.4:3633168-3633187 | None:intergenic | 25.0% |
| !!! | TTTTTTCAATTGGTCATATC+AGG | + | chr4.4:3632991-3633010 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGTAGGTAAAACG+TGG | - | chr4.4:3633025-3633044 | MS.gene20140:intron | 25.0% |
| AATATGTTAGTAAGCAAGCA+TGG | - | chr4.4:3629680-3629699 | MS.gene20140:intron | 30.0% | |
| AATCCCTTCTGTTGAAATTT+GGG | + | chr4.4:3632847-3632866 | None:intergenic | 30.0% | |
| ACCGTGGTTTAAACTTTAAA+TGG | - | chr4.4:3629417-3629436 | MS.gene20140:intron | 30.0% | |
| ACCTCTTAAAGGTGAATAAA+TGG | + | chr4.4:3633135-3633154 | None:intergenic | 30.0% | |
| ACCTTTCATGAATCTTTATG+AGG | - | chr4.4:3628693-3628712 | MS.gene20140:intron | 30.0% | |
| ACTAACTGCTATGTTTAGTT+AGG | - | chr4.4:3633451-3633470 | MS.gene20140:intron | 30.0% | |
| AGCGATTGATGAATTATCTA+AGG | + | chr4.4:3631227-3631246 | None:intergenic | 30.0% | |
| ATAAGAGTTGAATGCAACAT+TGG | - | chr4.4:3628881-3628900 | MS.gene20140:intron | 30.0% | |
| ATGTTTAGTTAGGGCAATTA+AGG | - | chr4.4:3633461-3633480 | MS.gene20140:intron | 30.0% | |
| ATTATATAGTGTATAGGAGC+TGG | - | chr4.4:3631453-3631472 | MS.gene20140:intron | 30.0% | |
| CAATATGGGTAAGATTCAAA+GGG | + | chr4.4:3631087-3631106 | None:intergenic | 30.0% | |
| CATAAATGAAACGTAGCTAT+AGG | - | chr4.4:3629005-3629024 | MS.gene20140:intron | 30.0% | |
| CATCAATACTTGTGATTTGA+GGG | + | chr4.4:3631263-3631282 | None:intergenic | 30.0% | |
| CATCACATAAACACACAAAT+AGG | + | chr4.4:3629306-3629325 | None:intergenic | 30.0% | |
| CTAACTGCTATGTTTAGTTA+GGG | - | chr4.4:3633452-3633471 | MS.gene20140:intron | 30.0% | |
| CTATTTGTGTGTTTATGTGA+TGG | - | chr4.4:3629304-3629323 | MS.gene20140:intron | 30.0% | |
| CTGATACCATGTTGAAATTT+GGG | + | chr4.4:3632662-3632681 | None:intergenic | 30.0% | |
| CTTGAGAAGAGAATATAAAG+AGG | - | chr4.4:3632775-3632794 | MS.gene20140:intron | 30.0% | |
| GAATAAATGGAGAATGATGA+AGG | - | chr4.4:3632526-3632545 | MS.gene20140:intron | 30.0% | |
| GGATTCCAAATTCATCAAAA+TGG | + | chr4.4:3633898-3633917 | None:intergenic | 30.0% | |
| GGTAATGTAACTAAGGAATA+AGG | - | chr4.4:3631143-3631162 | MS.gene20140:CDS | 30.0% | |
| GGTGACAGGATAAAAATATA+AGG | + | chr4.4:3633311-3633330 | None:intergenic | 30.0% | |
| GTGTGATAGTAAAACCTAAT+GGG | - | chr4.4:3629057-3629076 | MS.gene20140:intron | 30.0% | |
| TACCAATTGAGATAAACTCA+CGG | + | chr4.4:3633062-3633081 | None:intergenic | 30.0% | |
| TATGGGGTAATCAAACTAAA+GGG | + | chr4.4:3629381-3629400 | None:intergenic | 30.0% | |
| TCAGAAGCTACATAAAATTG+TGG | + | chr4.4:3629814-3629833 | None:intergenic | 30.0% | |
| TCAGCAGTAAATAGACTAAA+TGG | - | chr4.4:3629947-3629966 | MS.gene20140:intron | 30.0% | |
| TCATCAATACTTGTGATTTG+AGG | + | chr4.4:3631264-3631283 | None:intergenic | 30.0% | |
| TCCATTTATTCACCTTTAAG+AGG | - | chr4.4:3633131-3633150 | MS.gene20140:intron | 30.0% | |
| TCCTCATAAAGATTCATGAA+AGG | + | chr4.4:3628697-3628716 | None:intergenic | 30.0% | |
| TCGATATCATTTGATTAGCA+TGG | - | chr4.4:3627850-3627869 | MS.gene20140:CDS | 30.0% | |
| TCGGTTTAATACATACAGAA+AGG | + | chr4.4:3633361-3633380 | None:intergenic | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | + | chr4.4:3632663-3632682 | None:intergenic | 30.0% | |
| TGACTCCATATTATTTGTGA+CGG | - | chr4.4:3630840-3630859 | MS.gene20140:intron | 30.0% | |
| TGAGTTTATCTCAATTGGTA+GGG | - | chr4.4:3633062-3633081 | MS.gene20140:intron | 30.0% | |
| TGATACCATGTTGAAATTTG+GGG | + | chr4.4:3632661-3632680 | None:intergenic | 30.0% | |
| TGTGATAGTAAAACCTAATG+GGG | - | chr4.4:3629058-3629077 | MS.gene20140:intron | 30.0% | |
| TGTGGTTAATCAATGAGTTT+AGG | - | chr4.4:3627969-3627988 | MS.gene20140:intron | 30.0% | |
| TGTGTGATAGTAAAACCTAA+TGG | - | chr4.4:3629056-3629075 | MS.gene20140:intron | 30.0% | |
| TGTTTAGTTAGGGCAATTAA+GGG | - | chr4.4:3633462-3633481 | MS.gene20140:intron | 30.0% | |
| TTATGTTGGCCAATGTTTAT+AGG | - | chr4.4:3631122-3631141 | MS.gene20140:intron | 30.0% | |
| TTTGTGACAGTATTCATAGA+AGG | + | chr4.4:3631729-3631748 | None:intergenic | 30.0% | |
| ! | ATGGTTGTTTCAGAAGATAT+AGG | - | chr4.4:3634117-3634136 | MS.gene20140:CDS | 30.0% |
| ! | ATGTTTGTTACACTGATCAA+AGG | + | chr4.4:3633495-3633514 | None:intergenic | 30.0% |
| ! | CATTCATGTAGATTCTTTTG+GGG | + | chr4.4:3629034-3629053 | None:intergenic | 30.0% |
| ! | CTAAAAGTGACAATCTGTTT+TGG | + | chr4.4:3628326-3628345 | None:intergenic | 30.0% |
| ! | CTTGAGAAGAGTATATAAAG+AGG | - | chr4.4:3632590-3632609 | MS.gene20140:intron | 30.0% |
| ! | GCATTCATGTAGATTCTTTT+GGG | + | chr4.4:3629035-3629054 | None:intergenic | 30.0% |
| ! | GTCTTCTTTTCCATTTTGTA+TGG | - | chr4.4:3630495-3630514 | MS.gene20140:intron | 30.0% |
| ! | TACAATAATACCGGCATTTT+TGG | - | chr4.4:3631039-3631058 | MS.gene20140:intron | 30.0% |
| ! | TGCATTCATGTAGATTCTTT+TGG | + | chr4.4:3629036-3629055 | None:intergenic | 30.0% |
| ! | TGTTTGTTACACTGATCAAA+GGG | + | chr4.4:3633494-3633513 | None:intergenic | 30.0% |
| ! | TTAGTTACAGATATGATGGA+AGG | + | chr4.4:3633428-3633447 | None:intergenic | 30.0% |
| ! | TTCTTTTCCATTTTGTATGG+TGG | - | chr4.4:3630498-3630517 | MS.gene20140:intron | 30.0% |
| ! | TTTGCTGATTACTGCTATAT+AGG | - | chr4.4:3627803-3627822 | MS.gene20140:CDS | 30.0% |
| !! | AAGTTTTGACATATGGTGAA+AGG | - | chr4.4:3634145-3634164 | MS.gene20140:CDS | 30.0% |
| !!! | ATCTGCCATTTTGATGAATT+TGG | - | chr4.4:3633890-3633909 | MS.gene20140:intron | 30.0% |
| AAAATGACTCCTGTTTACAG+TGG | + | chr4.4:3628500-3628519 | None:intergenic | 35.0% | |
| AAAGACTTAATGTGACTGGA+AGG | + | chr4.4:3633814-3633833 | None:intergenic | 35.0% | |
| AAATGAAACGTAGCTATAGG+AGG | - | chr4.4:3629008-3629027 | MS.gene20140:intron | 35.0% | |
| AACATTCCTTTAATTGCCAG+AGG | - | chr4.4:3630374-3630393 | MS.gene20140:intron | 35.0% | |
| ACAAATGTTAAGCATCAGGA+AGG | + | chr4.4:3629758-3629777 | None:intergenic | 35.0% | |
| ACCAAAAATTGTCCTTACTC+AGG | - | chr4.4:3634266-3634285 | MS.gene20140:intron | 35.0% | |
| ACCAATTGAGATAAACTCAC+GGG | + | chr4.4:3633061-3633080 | None:intergenic | 35.0% | |
| AGAACTTGAACTTGCAAATC+TGG | + | chr4.4:3628025-3628044 | None:intergenic | 35.0% | |
| AGATGGATATACAAGCTCAA+TGG | + | chr4.4:3633554-3633573 | None:intergenic | 35.0% | |
| AGGTGAATAAATGGAGTGTA+CGG | + | chr4.4:3633126-3633145 | None:intergenic | 35.0% | |
| AGTTTGATTACCCCATAGAT+GGG | - | chr4.4:3629384-3629403 | MS.gene20140:intron | 35.0% | |
| ATAATTCAGATGCTATTGGG+AGG | - | chr4.4:3630621-3630640 | MS.gene20140:intron | 35.0% | |
| ATAGGTCTATATGTAGACTG+TGG | - | chr4.4:3628409-3628428 | MS.gene20140:intron | 35.0% | |
| ATCCCTTCTGTTGAAATTTG+GGG | + | chr4.4:3632846-3632865 | None:intergenic | 35.0% | |
| ATCGTTGTCAAAGTGAAACA+GGG | - | chr4.4:3630266-3630285 | MS.gene20140:intron | 35.0% | |
| ATGTTAGACTTGACAAATGC+TGG | + | chr4.4:3630359-3630378 | None:intergenic | 35.0% | |
| ATTATTACTACGCTCCCAAA+TGG | - | chr4.4:3628195-3628214 | MS.gene20140:intron | 35.0% | |
| CAATCCCTTCTGTTGAAATT+TGG | + | chr4.4:3632848-3632867 | None:intergenic | 35.0% | |
| CAATTAAGCAAGAAAACACC+GGG | + | chr4.4:3629224-3629243 | None:intergenic | 35.0% | |
| CCAAACCGTCACAAATAATA+TGG | + | chr4.4:3630848-3630867 | None:intergenic | 35.0% | |
| CCAATATGGGTAAGATTCAA+AGG | + | chr4.4:3631088-3631107 | None:intergenic | 35.0% | |
| CCAATTAAGCAAGAAAACAC+CGG | + | chr4.4:3629225-3629244 | None:intergenic | 35.0% | |
| CCATATTATTTGTGACGGTT+TGG | - | chr4.4:3630845-3630864 | MS.gene20140:intron | 35.0% | |
| CCTTTGAATCTTACCCATAT+TGG | - | chr4.4:3631085-3631104 | MS.gene20140:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr4.4:3632637-3632656 | None:intergenic | 35.0% | |
| CTAATAAAAGACTCTGCAGA+CGG | + | chr4.4:3633607-3633626 | None:intergenic | 35.0% | |
| CTATGGGGTAATCAAACTAA+AGG | + | chr4.4:3629382-3629401 | None:intergenic | 35.0% | |
| CTCATTAGCTGCAATATCAA+TGG | + | chr4.4:3633702-3633721 | None:intergenic | 35.0% | |
| CTTACCCATATTGGAGATAT+TGG | - | chr4.4:3631094-3631113 | MS.gene20140:intron | 35.0% | |
| CTTTAGGTGGTTTATTTGGA+TGG | - | chr4.4:3628070-3628089 | MS.gene20140:intron | 35.0% | |
| GACCAACAGTTAATTCATAC+CGG | + | chr4.4:3628246-3628265 | None:intergenic | 35.0% | |
| GAGAAGAGAATATAAAGAGG+AGG | - | chr4.4:3632778-3632797 | MS.gene20140:intron | 35.0% | |
| GATAATCAAGACCTGAAGAA+CGG | + | chr4.4:3630467-3630486 | None:intergenic | 35.0% | |
| GCTAGAAATTCACCTCTTAA+AGG | + | chr4.4:3633146-3633165 | None:intergenic | 35.0% | |
| GCTTGAAATAGGTTCAAGAA+TGG | - | chr4.4:3630520-3630539 | MS.gene20140:intron | 35.0% | |
| GCTTTCAAAAAATCTTCCAC+AGG | + | chr4.4:3634295-3634314 | None:intergenic | 35.0% | |
| GTGAGTTTATCTCAATTGGT+AGG | - | chr4.4:3633061-3633080 | MS.gene20140:intron | 35.0% | |
| TAAATCGGACAAAAGAGGTT+CGG | + | chr4.4:3630194-3630213 | None:intergenic | 35.0% | |
| TAAGAAATAAAAGGGCAACC+CGG | - | chr4.4:3631874-3631893 | MS.gene20140:intron | 35.0% | |
| TAAGCAAGCATGGTTCATAT+GGG | - | chr4.4:3629690-3629709 | MS.gene20140:intron | 35.0% | |
| TAGTTTGATTACCCCATAGA+TGG | - | chr4.4:3629383-3629402 | MS.gene20140:intron | 35.0% | |
| TATCGTTGTCAAAGTGAAAC+AGG | - | chr4.4:3630265-3630284 | MS.gene20140:intron | 35.0% | |
| TCATTTAAACATCTGGGTCT+TGG | - | chr4.4:3632302-3632321 | MS.gene20140:CDS | 35.0% | |
| TCCACAAGTTCATTCGATAT+CGG | - | chr4.4:3631002-3631021 | MS.gene20140:intron | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | + | chr4.4:3631940-3631959 | None:intergenic | 35.0% | |
| TTCAAATGCCAGAGCAAAAT+GGG | + | chr4.4:3630401-3630420 | None:intergenic | 35.0% | |
| TTCTCGTTCATGTACAGAAA+AGG | + | chr4.4:3633235-3633254 | None:intergenic | 35.0% | |
| TTTCAAGCCACCATACAAAA+TGG | + | chr4.4:3630508-3630527 | None:intergenic | 35.0% | |
| TTTGTATGGTGGCTTGAAAT+AGG | - | chr4.4:3630509-3630528 | MS.gene20140:intron | 35.0% | |
| ! | ACTAAAGGGTAATTTGAGAC+AGG | + | chr4.4:3629367-3629386 | None:intergenic | 35.0% |
| ! | AGTTGCTTGTTGATATTGTG+AGG | - | chr4.4:3628632-3628651 | MS.gene20140:intron | 35.0% |
| ! | ATGAGACCCCATTAACTTTT+GGG | - | chr4.4:3628440-3628459 | MS.gene20140:intron | 35.0% |
| ! | ATGGAGAATGATGAAGGTAT+TGG | - | chr4.4:3632532-3632551 | MS.gene20140:intron | 35.0% |
| ! | ATTTGGGAGCGTAGTAATAA+TGG | + | chr4.4:3628196-3628215 | None:intergenic | 35.0% |
| ! | CTACTGTCTTTTGGCATTTT+GGG | + | chr4.4:3628809-3628828 | None:intergenic | 35.0% |
| ! | CTTACCCTATTTTACACAAG+AGG | - | chr4.4:3631964-3631983 | MS.gene20140:CDS | 35.0% |
| ! | GAGAAGAGTATATAAAGAGG+AGG | - | chr4.4:3632593-3632612 | MS.gene20140:intron | 35.0% |
| ! | GTACTTGATGTGTTTTCAGA+TGG | - | chr4.4:3634098-3634117 | MS.gene20140:CDS | 35.0% |
| ! | GTAGTAATAATGGTTTTCCC+AGG | + | chr4.4:3628186-3628205 | None:intergenic | 35.0% |
| ! | TACTGTCTTTTGGCATTTTG+GGG | + | chr4.4:3628808-3628827 | None:intergenic | 35.0% |
| ! | TATGAGACCCCATTAACTTT+TGG | - | chr4.4:3628439-3628458 | MS.gene20140:intron | 35.0% |
| ! | TATGTAGCTTCTGAAAGTGA+AGG | - | chr4.4:3629820-3629839 | MS.gene20140:intron | 35.0% |
| ! | TCCAGTCACATTAAGTCTTT+TGG | - | chr4.4:3633814-3633833 | MS.gene20140:intron | 35.0% |
| ! | TCCTGAGTAAGGACAATTTT+TGG | + | chr4.4:3634270-3634289 | None:intergenic | 35.0% |
| ! | TCTGCTTTAGGTGGTTTATT+TGG | - | chr4.4:3628066-3628085 | MS.gene20140:intron | 35.0% |
| ! | TGAGATGGATTTACATACTC+TGG | + | chr4.4:3633919-3633938 | None:intergenic | 35.0% |
| ! | TTTCCTTAAAGCAATGGGTT+TGG | + | chr4.4:3628833-3628852 | None:intergenic | 35.0% |
| !! | GGAAGACAAGTTTTGACATA+TGG | - | chr4.4:3634138-3634157 | MS.gene20140:CDS | 35.0% |
| !! | GTTTATGTGATGGTGTTGTT+GGG | - | chr4.4:3629314-3629333 | MS.gene20140:intron | 35.0% |
| !! | TATGGGTGGTGTTGTATAAA+AGG | - | chr4.4:3629707-3629726 | MS.gene20140:intron | 35.0% |
| !! | TATGTGTGATTTTGGCACTT+TGG | - | chr4.4:3632201-3632220 | MS.gene20140:intron | 35.0% |
| !! | TGATTTTGGCACTTTGGTTT+TGG | - | chr4.4:3632207-3632226 | MS.gene20140:CDS | 35.0% |
| !! | TGGAGAATGATGAAGGTATT+GGG | - | chr4.4:3632533-3632552 | MS.gene20140:intron | 35.0% |
| !! | TGTTTATGTGATGGTGTTGT+TGG | - | chr4.4:3629313-3629332 | MS.gene20140:intron | 35.0% |
| !!! | ATTCATTCTGCTGGTTTTTC+TGG | - | chr4.4:3629893-3629912 | MS.gene20140:intron | 35.0% |
| !!! | GGAAGATTTTTTGAAAGCAG+TGG | - | chr4.4:3634297-3634316 | MS.gene20140:intron | 35.0% |
| !!! | TATACTGATTTTGGCTCTTC+AGG | + | chr4.4:3630232-3630251 | None:intergenic | 35.0% |
| !!! | TGGTGTTGTTGGGTTTTATT+TGG | - | chr4.4:3629324-3629343 | MS.gene20140:intron | 35.0% |
| AAACAATCCTCGTCTGCTTT+AGG | - | chr4.4:3628054-3628073 | MS.gene20140:CDS | 40.0% | |
| AAAGGTCCCTCAAATTCCAA+CGG | + | chr4.4:3633217-3633236 | None:intergenic | 40.0% | |
| AAAGTCTCCGTTGGAATTTG+AGG | - | chr4.4:3633207-3633226 | MS.gene20140:intron | 40.0% | |
| AAGTCTCCGTTGGAATTTGA+GGG | - | chr4.4:3633208-3633227 | MS.gene20140:intron | 40.0% | |
| AATAGATCGCAGACATCAGA+TGG | + | chr4.4:3633571-3633590 | None:intergenic | 40.0% | |
| ACAATGGCATCATATGGAGA+TGG | - | chr4.4:3634379-3634398 | MS.gene20140:intron | 40.0% | |
| ACACATTGAAGTCAGGGTTA+TGG | + | chr4.4:3631196-3631215 | None:intergenic | 40.0% | |
| AGGAGGCTATATAAAACAGC+TGG | + | chr4.4:3629249-3629268 | None:intergenic | 40.0% | |
| AGGCGACTTTAACTCCATTT+GGG | + | chr4.4:3628212-3628231 | None:intergenic | 40.0% | |
| AGGGTTATGGTCTGCTTTAA+GGG | + | chr4.4:3631183-3631202 | None:intergenic | 40.0% | |
| AGTGGACGAAGTAACTTTGA+AGG | - | chr4.4:3634315-3634334 | MS.gene20140:intron | 40.0% | |
| AGTTTAAACCACGGTACATG+AGG | + | chr4.4:3629412-3629431 | None:intergenic | 40.0% | |
| ATTGTAATATGCATGTGCCG+GGG | - | chr4.4:3633092-3633111 | MS.gene20140:intron | 40.0% | |
| CAAAGCCAACATACACACTA+AGG | + | chr4.4:3631303-3631322 | None:intergenic | 40.0% | |
| CAAGAAAAAACTTCGGTGAC+AGG | + | chr4.4:3633325-3633344 | None:intergenic | 40.0% | |
| CACCGGTATGAATTAACTGT+TGG | - | chr4.4:3628241-3628260 | MS.gene20140:intron | 40.0% | |
| CATTGTAATATGCATGTGCC+GGG | - | chr4.4:3633091-3633110 | MS.gene20140:intron | 40.0% | |
| CCAAAATCAGTATACACAGG+TGG | - | chr4.4:3630238-3630257 | MS.gene20140:intron | 40.0% | |
| CCAAAATGCCAAAAGACAGT+AGG | - | chr4.4:3628807-3628826 | MS.gene20140:intron | 40.0% | |
| CCAATTGAGATAAACTCACG+GGG | + | chr4.4:3633060-3633079 | None:intergenic | 40.0% | |
| CCTCAAGTTTCATATGAGAG+CGG | + | chr4.4:3631499-3631518 | None:intergenic | 40.0% | |
| CGCTCTCATATGAAACTTGA+GGG | - | chr4.4:3631497-3631516 | MS.gene20140:intron | 40.0% | |
| CGTGACAAATGTTAAGCATC+AGG | + | chr4.4:3629762-3629781 | None:intergenic | 40.0% | |
| GAAAACACCGGGACAAAATA+TGG | + | chr4.4:3629213-3629232 | None:intergenic | 40.0% | |
| GAAGACCTATGTTCCTGAAA+TGG | - | chr4.4:3628606-3628625 | MS.gene20140:intron | 40.0% | |
| GACTTGGATACCAAAAATGC+CGG | + | chr4.4:3631052-3631071 | None:intergenic | 40.0% | |
| GAGCCAAAATCAGTATACAC+AGG | - | chr4.4:3630235-3630254 | MS.gene20140:intron | 40.0% | |
| GATGTAGTATGACAGTAGTC+AGG | + | chr4.4:3629269-3629288 | None:intergenic | 40.0% | |
| GCATAACTTGAAGGATGCTA+TGG | - | chr4.4:3630435-3630454 | MS.gene20140:intron | 40.0% | |
| GCATTGTAATATGCATGTGC+CGG | - | chr4.4:3633090-3633109 | MS.gene20140:intron | 40.0% | |
| GCCAAAAGACTTAATGTGAC+TGG | + | chr4.4:3633818-3633837 | None:intergenic | 40.0% | |
| GCTGTGTACAATACACCAAA+TGG | + | chr4.4:3631944-3631963 | None:intergenic | 40.0% | |
| GGACAAAATATGGCTGACAA+AGG | + | chr4.4:3629203-3629222 | None:intergenic | 40.0% | |
| GGTGAATAAATGGAGTGTAC+GGG | + | chr4.4:3633125-3633144 | None:intergenic | 40.0% | |
| GTAAATAGGGACATCTGTTC+TGG | - | chr4.4:3631569-3631588 | MS.gene20140:intron | 40.0% | |
| GTAAGCAAGCATGGTTCATA+TGG | - | chr4.4:3629689-3629708 | MS.gene20140:intron | 40.0% | |
| GTCATGTTAACAAGTGCTCT+AGG | + | chr4.4:3632131-3632150 | None:intergenic | 40.0% | |
| GTGAATAAATGGAGTGTACG+GGG | + | chr4.4:3633124-3633143 | None:intergenic | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | + | chr4.4:3631941-3631960 | None:intergenic | 40.0% | |
| GTGTAGCCCCAAAAGTTAAT+GGG | + | chr4.4:3628450-3628469 | None:intergenic | 40.0% | |
| GTTCAAATGCCAGAGCAAAA+TGG | + | chr4.4:3630402-3630421 | None:intergenic | 40.0% | |
| TACTAACCCTGAAAGCTCTA+AGG | + | chr4.4:3627690-3627709 | None:intergenic | 40.0% | |
| TAGTAAAACCTAATGGGGAC+TGG | - | chr4.4:3629063-3629082 | MS.gene20140:intron | 40.0% | |
| TATAGACCTATTGAAGCAGC+AGG | + | chr4.4:3628400-3628419 | None:intergenic | 40.0% | |
| TCCTAGACACATTGAAGTCA+GGG | + | chr4.4:3631202-3631221 | None:intergenic | 40.0% | |
| TCGTTGTCAAAGTGAAACAG+GGG | - | chr4.4:3630267-3630286 | MS.gene20140:intron | 40.0% | |
| TGAACTTGCAAATCTGGTAG+TGG | + | chr4.4:3628019-3628038 | None:intergenic | 40.0% | |
| TGATGCCTTAGTGTGTATGT+TGG | - | chr4.4:3631295-3631314 | MS.gene20140:intron | 40.0% | |
| TGTAGCCCCAAAAGTTAATG+GGG | + | chr4.4:3628449-3628468 | None:intergenic | 40.0% | |
| TGTCTTCAGCTTATTATCCG+TGG | - | chr4.4:3631357-3631376 | MS.gene20140:intron | 40.0% | |
| TGTGTAGCCCCAAAAGTTAA+TGG | + | chr4.4:3628451-3628470 | None:intergenic | 40.0% | |
| TTAGGCCCCAAATTTCAACA+TGG | - | chr4.4:3632653-3632672 | MS.gene20140:intron | 40.0% | |
| TTAGTAGGTAAAACGTGGGA+AGG | - | chr4.4:3633030-3633049 | MS.gene20140:intron | 40.0% | |
| TTTCAGTCAGTAGTGCTCTT+GGG | + | chr4.4:3632234-3632253 | None:intergenic | 40.0% | |
| ! | AGAGTCTTATCTATCCGATG+TGG | + | chr4.4:3632572-3632591 | None:intergenic | 40.0% |
| ! | CCGGTGTTTTCTTGCTTAAT+TGG | - | chr4.4:3629222-3629241 | MS.gene20140:intron | 40.0% |
| ! | CCTACTGTCTTTTGGCATTT+TGG | + | chr4.4:3628810-3628829 | None:intergenic | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | + | chr4.4:3632571-3632590 | None:intergenic | 40.0% |
| ! | TAGCAAGTCTTGAGGGTTTT+TGG | + | chr4.4:3629864-3629883 | None:intergenic | 40.0% |
| ! | TCAGCTTCTAGAGAGCAAAT+GGG | - | chr4.4:3628565-3628584 | MS.gene20140:intron | 40.0% |
| ! | TGAGACCCCATTAACTTTTG+GGG | - | chr4.4:3628441-3628460 | MS.gene20140:intron | 40.0% |
| ! | TTGTCAGCCATATTTTGTCC+CGG | - | chr4.4:3629203-3629222 | MS.gene20140:intron | 40.0% |
| ! | TTTTCAGTCAGTAGTGCTCT+TGG | + | chr4.4:3632235-3632254 | None:intergenic | 40.0% |
| !! | AAACAGGAGTCATTTTCGTG+TGG | - | chr4.4:3628504-3628523 | MS.gene20140:CDS | 40.0% |
| !! | AAACCCTCAAGACTTGCTAT+TGG | - | chr4.4:3629865-3629884 | MS.gene20140:intron | 40.0% |
| !! | ACAACTCAGAGTATTGCTGT+TGG | - | chr4.4:3628749-3628768 | MS.gene20140:intron | 40.0% |
| !! | AGCTAAAAGAGGATTAGCCA+AGG | + | chr4.4:3629921-3629940 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr4.4:3632635-3632654 | MS.gene20140:intron | 40.0% |
| !! | CTTAGTGTGTATGTTGGCTT+TGG | - | chr4.4:3631301-3631320 | MS.gene20140:intron | 40.0% |
| !! | GCTGATTCTGAAGCTAAAAG+AGG | + | chr4.4:3629932-3629951 | None:intergenic | 40.0% |
| !! | TAATGCTGCTTTCTTTGCCT+TGG | - | chr4.4:3631797-3631816 | MS.gene20140:intron | 40.0% |
| !! | TGTTGGCTTTGGTAGGTTTA+TGG | - | chr4.4:3631312-3631331 | MS.gene20140:intron | 40.0% |
| !!! | CCACCTGTGTATACTGATTT+TGG | + | chr4.4:3630241-3630260 | None:intergenic | 40.0% |
| !!! | GTGTGCGCACTTTTTTTAGT+AGG | - | chr4.4:3633015-3633034 | MS.gene20140:intron | 40.0% |
| !!! | TATGGTTTTGACCGTTCTTC+AGG | - | chr4.4:3630453-3630472 | MS.gene20140:intron | 40.0% |
| AAACCAGTAGAACTAGCTCC+AGG | + | chr4.4:3629482-3629501 | None:intergenic | 45.0% | |
| ACAAGCAACTCCACCATTTC+AGG | + | chr4.4:3628622-3628641 | None:intergenic | 45.0% | |
| ACCCTGACTTCAATGTGTCT+AGG | - | chr4.4:3631198-3631217 | MS.gene20140:CDS | 45.0% | |
| ACGTGGAACACTGGGTAAAT+CGG | + | chr4.4:3630209-3630228 | None:intergenic | 45.0% | |
| AGGCCAAACCCATTGCTTTA+AGG | - | chr4.4:3628827-3628846 | MS.gene20140:intron | 45.0% | |
| AGGCCCCAAATTTCAACAGA+AGG | - | chr4.4:3632840-3632859 | MS.gene20140:intron | 45.0% | |
| AGGGACTTACTGTTGTGACT+TGG | + | chr4.4:3631068-3631087 | None:intergenic | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | + | chr4.4:3632564-3632583 | None:intergenic | 45.0% | |
| ATGGGTCCTCTGGCAATTAA+AGG | + | chr4.4:3630383-3630402 | None:intergenic | 45.0% | |
| ATTCAGATGCTATTGGGAGG+CGG | - | chr4.4:3630624-3630643 | MS.gene20140:intron | 45.0% | |
| CAATGTACCTTGTCCAGAAG+TGG | + | chr4.4:3633738-3633757 | None:intergenic | 45.0% | |
| CAGGGTTATGGTCTGCTTTA+AGG | + | chr4.4:3631184-3631203 | None:intergenic | 45.0% | |
| CATTTCGTCACCTCTCACAA+TGG | - | chr4.4:3634363-3634382 | MS.gene20140:intron | 45.0% | |
| CCATATGATGCCATTGTGAG+AGG | + | chr4.4:3634376-3634395 | None:intergenic | 45.0% | |
| CCCCGTGAGTTTATCTCAAT+TGG | - | chr4.4:3633057-3633076 | MS.gene20140:intron | 45.0% | |
| CCGCTCTCATATGAAACTTG+AGG | - | chr4.4:3631496-3631515 | MS.gene20140:intron | 45.0% | |
| CCTCCAATAGCAAGTCTTGA+GGG | + | chr4.4:3629871-3629890 | None:intergenic | 45.0% | |
| CCTCTCACAATGGCATCATA+TGG | - | chr4.4:3634373-3634392 | MS.gene20140:intron | 45.0% | |
| CCTTCAAGACCACTGTAAAC+AGG | - | chr4.4:3628488-3628507 | MS.gene20140:CDS | 45.0% | |
| CGAATAGTACTTGCAGCTTC+TGG | - | chr4.4:3630139-3630158 | MS.gene20140:intron | 45.0% | |
| CTCCACCATTTCAGGAACAT+AGG | + | chr4.4:3628614-3628633 | None:intergenic | 45.0% | |
| CTCCTAGACACATTGAAGTC+AGG | + | chr4.4:3631203-3631222 | None:intergenic | 45.0% | |
| CTGAAAGTGAAGGCTGAGAT+TGG | - | chr4.4:3629830-3629849 | MS.gene20140:intron | 45.0% | |
| CTGGGTAAATCGGACAAAAG+AGG | + | chr4.4:3630199-3630218 | None:intergenic | 45.0% | |
| CTGGTAAAGGGATGTATTCG+CGG | - | chr4.4:3630670-3630689 | MS.gene20140:intron | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | - | chr4.4:3632555-3632574 | MS.gene20140:intron | 45.0% | |
| GAACCCTGCGTTTCTTGATT+GGG | - | chr4.4:3628654-3628673 | MS.gene20140:intron | 45.0% | |
| GAAGCTGCAAGTACTATTCG+AGG | + | chr4.4:3630139-3630158 | None:intergenic | 45.0% | |
| GAAGTGGGAAATCTAGAGGT+GGG | + | chr4.4:3628122-3628141 | None:intergenic | 45.0% | |
| GAAGTGTAACACCAGGAAGT+GGG | + | chr4.4:3628137-3628156 | None:intergenic | 45.0% | |
| GACAAATGCGACAGTTATCG+TGG | + | chr4.4:3628291-3628310 | None:intergenic | 45.0% | |
| GACAGAAGAAGTGGATGATC+CGG | + | chr4.4:3628100-3628119 | None:intergenic | 45.0% | |
| GACCTATGTTCCTGAAATGG+TGG | - | chr4.4:3628609-3628628 | MS.gene20140:intron | 45.0% | |
| GAGGCGACTTTAACTCCATT+TGG | + | chr4.4:3628213-3628232 | None:intergenic | 45.0% | |
| GCCGATATCGAATGAACTTG+TGG | + | chr4.4:3631006-3631025 | None:intergenic | 45.0% | |
| GCTTTCGTTTGCAGTTGATC+AGG | - | chr4.4:3633836-3633855 | MS.gene20140:intron | 45.0% | |
| GGCCCCAAATTTCAACAGAA+GGG | - | chr4.4:3632841-3632860 | MS.gene20140:intron | 45.0% | |
| GGTTTATTTGGATGGCTCAC+CGG | - | chr4.4:3628078-3628097 | MS.gene20140:intron | 45.0% | |
| GTAGTATGACAGTAGTCAGG+AGG | + | chr4.4:3629266-3629285 | None:intergenic | 45.0% | |
| TAAACCACCTAAAGCAGACG+AGG | + | chr4.4:3628064-3628083 | None:intergenic | 45.0% | |
| TACACATTTGCTCGAACGGA+TGG | - | chr4.4:3628465-3628484 | MS.gene20140:CDS | 45.0% | |
| TACATGATCAGGCAATGGAG+CGG | + | chr4.4:3628160-3628179 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | + | chr4.4:3632565-3632584 | None:intergenic | 45.0% | |
| TCAACTTTCCAGTCCCCATT+AGG | + | chr4.4:3629074-3629093 | None:intergenic | 45.0% | |
| TCATACCGGTGATGTTTCAG+AGG | + | chr4.4:3628232-3628251 | None:intergenic | 45.0% | |
| TTAGGCTCGTTCGTGCAATA+GGG | - | chr4.4:3627987-3628006 | MS.gene20140:intron | 45.0% | |
| TTCACGCCTTAGAGCTTTCA+GGG | - | chr4.4:3627681-3627700 | MS.gene20140:CDS | 45.0% | |
| TTCCACAGGTTTCCTGAGTA+AGG | + | chr4.4:3634281-3634300 | None:intergenic | 45.0% | |
| TTGGAGGCAATTCATTCTGC+TGG | - | chr4.4:3629884-3629903 | MS.gene20140:intron | 45.0% | |
| TTTAGGCTCGTTCGTGCAAT+AGG | - | chr4.4:3627986-3628005 | MS.gene20140:intron | 45.0% | |
| ! | ATTCTCACAGTTGCCACTTC+TGG | - | chr4.4:3633722-3633741 | MS.gene20140:CDS | 45.0% |
| ! | CATTTGCTCTCTAGAAGCTG+AGG | + | chr4.4:3628566-3628585 | None:intergenic | 45.0% |
| ! | CCTGTTTACAGTGGTCTTGA+AGG | + | chr4.4:3628491-3628510 | None:intergenic | 45.0% |
| ! | CTCAGCTTCTAGAGAGCAAA+TGG | - | chr4.4:3628564-3628583 | MS.gene20140:intron | 45.0% |
| ! | CTTGGTGCGTGAATAGGTTT+AGG | + | chr4.4:3632690-3632709 | None:intergenic | 45.0% |
| ! | GGAAAGTGTAAGTCGTCTTG+AGG | - | chr4.4:3628776-3628795 | MS.gene20140:intron | 45.0% |
| ! | TGGCTTGCCTTATTGAACCA+CGG | - | chr4.4:3629454-3629473 | MS.gene20140:intron | 45.0% |
| !! | CAGAGTATTGCTGTTGGAAC+TGG | - | chr4.4:3628755-3628774 | MS.gene20140:intron | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4.4:3632628-3632647 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4.4:3632625-3632644 | MS.gene20140:intron | 45.0% |
| !! | GAGTCATTTTCGTGTGGTTC+GGG | - | chr4.4:3628510-3628529 | MS.gene20140:intron | 45.0% |
| !! | GGAGTCATTTTCGTGTGGTT+CGG | - | chr4.4:3628509-3628528 | MS.gene20140:intron | 45.0% |
| !! | GGCAGATTTCGTAGCTTGTT+TGG | + | chr4.4:3633877-3633896 | None:intergenic | 45.0% |
| !! | GTGTGTATGTTGGCTTTGGT+AGG | - | chr4.4:3631305-3631324 | MS.gene20140:intron | 45.0% |
| !! | AAAAAAATATAAAATATTTG+GGG | + | chr4.4:3627745-3627764 | None:intergenic | 5.0% |
| !!! | AATAAATATAAACATATTTT+AGG | + | chr4.4:3630561-3630580 | None:intergenic | 5.0% |
| ACATGATCAGGCAATGGAGC+GGG | + | chr4.4:3628159-3628178 | None:intergenic | 50.0% | |
| ACCTCCCAATCAAGAAACGC+AGG | + | chr4.4:3628661-3628680 | None:intergenic | 50.0% | |
| ACTAGAGCTCCTGCATATGC+AGG | - | chr4.4:3631900-3631919 | MS.gene20140:intron | 50.0% | |
| AGCAGACGAGGATTGTTTCG+AGG | + | chr4.4:3628052-3628071 | None:intergenic | 50.0% | |
| AGCGGATAACCTGAACAGCT+TGG | + | chr4.4:3631481-3631500 | None:intergenic | 50.0% | |
| CCAGGAAGTGGGAAATCTAG+AGG | + | chr4.4:3628126-3628145 | None:intergenic | 50.0% | |
| CCTCCCAATCAAGAAACGCA+GGG | + | chr4.4:3628660-3628679 | None:intergenic | 50.0% | |
| CCTCTAGATTTCCCACTTCC+TGG | - | chr4.4:3628123-3628142 | MS.gene20140:intron | 50.0% | |
| CCTTATTGAACCACGGTACC+TGG | - | chr4.4:3629461-3629480 | MS.gene20140:intron | 50.0% | |
| CGCGAATACATCCCTTTACC+AGG | + | chr4.4:3630672-3630691 | None:intergenic | 50.0% | |
| CTAGAGCTCCTGCATATGCA+GGG | - | chr4.4:3631901-3631920 | MS.gene20140:intron | 50.0% | |
| CTGGCATTTGAACTTCCTGG+CGG | - | chr4.4:3630409-3630428 | MS.gene20140:intron | 50.0% | |
| CTTCACGCCTTAGAGCTTTC+AGG | - | chr4.4:3627680-3627699 | MS.gene20140:CDS | 50.0% | |
| GCAAGCATGGTTCATATGGG+TGG | - | chr4.4:3629693-3629712 | MS.gene20140:intron | 50.0% | |
| GCAATCCTCACCTTACAAGC+CGG | - | chr4.4:3632615-3632634 | MS.gene20140:intron | 50.0% | |
| GCCTCCAATAGCAAGTCTTG+AGG | + | chr4.4:3629872-3629891 | None:intergenic | 50.0% | |
| GCGGATAACCTGAACAGCTT+GGG | + | chr4.4:3631480-3631499 | None:intergenic | 50.0% | |
| GCTCTGGCATTTGAACTTCC+TGG | - | chr4.4:3630406-3630425 | MS.gene20140:intron | 50.0% | |
| GGAACCCTGCGTTTCTTGAT+TGG | - | chr4.4:3628653-3628672 | MS.gene20140:intron | 50.0% | |
| GGAAGGTAGAAAGTCTCCGT+TGG | - | chr4.4:3633198-3633217 | MS.gene20140:intron | 50.0% | |
| GGAAGTGGGAAATCTAGAGG+TGG | + | chr4.4:3628123-3628142 | None:intergenic | 50.0% | |
| GGACAAAAGAGGTTCGGCAA+TGG | + | chr4.4:3630188-3630207 | None:intergenic | 50.0% | |
| GGGCTACACATTTGCTCGAA+CGG | - | chr4.4:3628461-3628480 | MS.gene20140:CDS | 50.0% | |
| GTAGGTAAAACGTGGGAAGG+TGG | - | chr4.4:3633033-3633052 | MS.gene20140:intron | 50.0% | |
| GTCCTTACTCAGGAAACCTG+TGG | - | chr4.4:3634276-3634295 | MS.gene20140:intron | 50.0% | |
| GTGGATCATTCTCAGCTGGT+GGG | - | chr4.4:3630646-3630665 | MS.gene20140:intron | 50.0% | |
| TAGAGGTGGGACAGAAGAAG+TGG | + | chr4.4:3628109-3628128 | None:intergenic | 50.0% | |
| TCTTCAGGACGTGGAACACT+GGG | + | chr4.4:3630217-3630236 | None:intergenic | 50.0% | |
| TGATTGGGAGGTCAATGAGC+AGG | - | chr4.4:3628669-3628688 | MS.gene20140:intron | 50.0% | |
| ! | ACAGTTGCCACTTCTGGACA+AGG | - | chr4.4:3633728-3633747 | MS.gene20140:CDS | 50.0% |
| ! | AGCTTCTGGTGTTGAGCATG+AGG | - | chr4.4:3630153-3630172 | MS.gene20140:intron | 50.0% |
| ! | CAATCCTCGTCTGCTTTAGG+TGG | - | chr4.4:3628057-3628076 | MS.gene20140:CDS | 50.0% |
| ! | CAGTCTCCTGCTGCTTCAAT+AGG | - | chr4.4:3628391-3628410 | MS.gene20140:intron | 50.0% |
| ! | CCAGGTACCGTGGTTCAATA+AGG | + | chr4.4:3629464-3629483 | None:intergenic | 50.0% |
| ! | GCTGCTTTCTTTGCCTTGGT+TGG | - | chr4.4:3631801-3631820 | MS.gene20140:intron | 50.0% |
| ! | GGAAGTGTAACACCAGGAAG+TGG | + | chr4.4:3628138-3628157 | None:intergenic | 50.0% |
| ! | GGGTTTGGCCTACTGTCTTT+TGG | + | chr4.4:3628818-3628837 | None:intergenic | 50.0% |
| ! | TACATGAGGCGCCCATCTAT+GGG | + | chr4.4:3629398-3629417 | None:intergenic | 50.0% |
| !! | AGTCGCCTCTGAAACATCAC+CGG | - | chr4.4:3628224-3628243 | MS.gene20140:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4.4:3632623-3632642 | None:intergenic | 50.0% |
| !! | CCCTCAAGACTTGCTATTGG+AGG | - | chr4.4:3629868-3629887 | MS.gene20140:intron | 50.0% |
| !! | CTGCTCACTGATTCGTAGCT+TGG | + | chr4.4:3634498-3634517 | None:intergenic | 50.0% |
| !! | CTTGCAAATCTGGTAGTGGC+AGG | + | chr4.4:3628015-3628034 | None:intergenic | 50.0% |
| !! | GTACCTGGAGCTAGTTCTAC+TGG | - | chr4.4:3629476-3629495 | MS.gene20140:intron | 50.0% |
| !! | TCATTTTCGTGTGGTTCGGG+AGG | - | chr4.4:3628513-3628532 | MS.gene20140:intron | 50.0% |
| !! | TTTGGGCTTGGTGCGTGAAT+AGG | + | chr4.4:3632696-3632715 | None:intergenic | 50.0% |
| !!! | GATTTTGGCTCTTCAGGACG+TGG | + | chr4.4:3630226-3630245 | None:intergenic | 50.0% |
| !!! | TGCTGGTTTTTCTGGTGCCT+TGG | - | chr4.4:3629901-3629920 | MS.gene20140:intron | 50.0% |
| AGTGTACGGGGTTCAAACCC+CGG | + | chr4.4:3633112-3633131 | None:intergenic | 55.0% | |
| CATTTGAACTTCCTGGCGGC+TGG | - | chr4.4:3630413-3630432 | MS.gene20140:intron | 55.0% | |
| CCAGAGCAAAATGGGTCCTC+TGG | + | chr4.4:3630393-3630412 | None:intergenic | 55.0% | |
| CCCTGCGTTTCTTGATTGGG+AGG | - | chr4.4:3628657-3628676 | MS.gene20140:intron | 55.0% | |
| CTCTTCAGGACGTGGAACAC+TGG | + | chr4.4:3630218-3630237 | None:intergenic | 55.0% | |
| GGCGCTACATGATCAGGCAA+TGG | + | chr4.4:3628165-3628184 | None:intergenic | 55.0% | |
| GGTGGATCATTCTCAGCTGG+TGG | - | chr4.4:3630645-3630664 | MS.gene20140:intron | 55.0% | |
| TGCCTGATCATGTAGCGCCT+GGG | - | chr4.4:3628166-3628185 | MS.gene20140:intron | 55.0% | |
| TGGCGGCTGGCATAACTTGA+AGG | - | chr4.4:3630426-3630445 | MS.gene20140:intron | 55.0% | |
| TTCCCAGGCGCTACATGATC+AGG | + | chr4.4:3628171-3628190 | None:intergenic | 55.0% | |
| TTGCCTGATCATGTAGCGCC+TGG | - | chr4.4:3628165-3628184 | MS.gene20140:intron | 55.0% | |
| ! | ACATGAGGCGCCCATCTATG+GGG | + | chr4.4:3629397-3629416 | None:intergenic | 55.0% |
| ! | AGAACTAGCTCCAGGTACCG+TGG | + | chr4.4:3629474-3629493 | None:intergenic | 55.0% |
| ! | ATGCAGGAGCTCTAGTGCAC+CGG | + | chr4.4:3631896-3631915 | None:intergenic | 55.0% |
| ! | CCAGAGGACCCATTTTGCTC+TGG | - | chr4.4:3630390-3630409 | MS.gene20140:intron | 55.0% |
| ! | GGCAATTGGTGGCAATGTGC+AGG | - | chr4.4:3628540-3628559 | MS.gene20140:intron | 55.0% |
| ! | GTACATGAGGCGCCCATCTA+TGG | + | chr4.4:3629399-3629418 | None:intergenic | 55.0% |
| ! | TTCAAGTTATGCCAGCCGCC+AGG | + | chr4.4:3630427-3630446 | None:intergenic | 55.0% |
| !! | AAGCCCAAAGAGTGCTGAGG+GGG | - | chr4.4:3632707-3632726 | MS.gene20140:intron | 55.0% |
| !! | ACCAAGCCCAAAGAGTGCTG+AGG | - | chr4.4:3632704-3632723 | MS.gene20140:intron | 55.0% |
| !! | CAAGCCCAAAGAGTGCTGAG+GGG | - | chr4.4:3632706-3632725 | MS.gene20140:intron | 55.0% |
| !! | CCAAGCCCAAAGAGTGCTGA+GGG | - | chr4.4:3632705-3632724 | MS.gene20140:intron | 55.0% |
| !! | TTTTCGTGTGGTTCGGGAGG+TGG | - | chr4.4:3628516-3628535 | MS.gene20140:intron | 55.0% |
| ACCCCCCCTCAGCACTCTTT+GGG | + | chr4.4:3632713-3632732 | None:intergenic | 60.0% | |
| CAGATGCTATTGGGAGGCGG+TGG | - | chr4.4:3630627-3630646 | MS.gene20140:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr4.4:3631913-3631932 | MS.gene20140:CDS | 60.0% | |
| CCCTCAGCACTCTTTGGGCT+TGG | + | chr4.4:3632708-3632727 | None:intergenic | 60.0% | |
| CTCCTGCATATGCAGGGTCC+GGG | - | chr4.4:3631907-3631926 | MS.gene20140:intron | 60.0% | |
| GAGCTGGACCCAAGCTGTTC+AGG | - | chr4.4:3631469-3631488 | MS.gene20140:intron | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr4.4:3631912-3631931 | MS.gene20140:CDS | 60.0% | |
| GCTCCTGCATATGCAGGGTC+CGG | - | chr4.4:3631906-3631925 | MS.gene20140:intron | 60.0% | |
| GGCGGTGGATCATTCTCAGC+TGG | - | chr4.4:3630642-3630661 | MS.gene20140:intron | 60.0% | |
| GTTCGGGAGGTGGAGGCAAT+TGG | - | chr4.4:3628526-3628545 | MS.gene20140:intron | 60.0% | |
| TGCATATGCAGGGTCCGGGA+AGG | - | chr4.4:3631911-3631930 | MS.gene20140:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+AGG | + | chr4.4:3631912-3631931 | None:intergenic | 60.0% | |
| ! | AGTGCTGAGGGGGGGTGTAT+TGG | - | chr4.4:3632717-3632736 | MS.gene20140:intron | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4.4:3631928-3631947 | None:intergenic | 60.0% |
| ! | CAGCTGGTGGGCCTGGTAAA+GGG | - | chr4.4:3630658-3630677 | MS.gene20140:intron | 60.0% |
| ! | GGAGCGGGAAGTGTAACACC+AGG | + | chr4.4:3628144-3628163 | None:intergenic | 60.0% |
| ! | GTGCTGAGGGGGGGTGTATT+GGG | - | chr4.4:3632718-3632737 | MS.gene20140:intron | 60.0% |
| ! | TCAGCTGGTGGGCCTGGTAA+AGG | - | chr4.4:3630657-3630676 | MS.gene20140:intron | 60.0% |
| ! | TCATTCTCAGCTGGTGGGCC+TGG | - | chr4.4:3630651-3630670 | MS.gene20140:intron | 60.0% |
| ! | TGCAGGAGCTCTAGTGCACC+GGG | + | chr4.4:3631895-3631914 | None:intergenic | 60.0% |
| !! | AGCCCAAAGAGTGCTGAGGG+GGG | - | chr4.4:3632708-3632727 | MS.gene20140:intron | 60.0% |
| CACCCCCCCTCAGCACTCTT+TGG | + | chr4.4:3632714-3632733 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr4.4:3631926-3631945 | MS.gene20140:CDS | 65.0% | |
| CGGGAGGTGGAGGCAATTGG+TGG | - | chr4.4:3628529-3628548 | MS.gene20140:intron | 65.0% | |
| GATGGGCGCCTCATGTACCG+TGG | - | chr4.4:3629401-3629420 | MS.gene20140:intron | 65.0% | |
| ! | TCGTGTGGTTCGGGAGGTGG+AGG | - | chr4.4:3628519-3628538 | MS.gene20140:intron | 65.0% |
| !! | GCCCAAAGAGTGCTGAGGGG+GGG | - | chr4.4:3632709-3632728 | MS.gene20140:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 3627664 | 3634536 | 3627664 | ID=MS.gene20140 |
| chr4.4 | mRNA | 3627664 | 3634536 | 3627664 | ID=MS.gene20140.t1;Parent=MS.gene20140 |
| chr4.4 | exon | 3634498 | 3634536 | 3634498 | ID=MS.gene20140.t1.exon1;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3634498 | 3634536 | 3634498 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3633955 | 3634209 | 3633955 | ID=MS.gene20140.t1.exon2;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3633955 | 3634209 | 3633955 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3633510 | 3633806 | 3633510 | ID=MS.gene20140.t1.exon3;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3633510 | 3633806 | 3633510 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3632206 | 3632373 | 3632206 | ID=MS.gene20140.t1.exon4;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3632206 | 3632373 | 3632206 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3631912 | 3632079 | 3631912 | ID=MS.gene20140.t1.exon5;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3631912 | 3632079 | 3631912 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3631726 | 3631806 | 3631726 | ID=MS.gene20140.t1.exon6;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3631726 | 3631806 | 3631726 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3631504 | 3631570 | 3631504 | ID=MS.gene20140.t1.exon7;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3631504 | 3631570 | 3631504 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3631123 | 3631220 | 3631123 | ID=MS.gene20140.t1.exon8;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3631123 | 3631220 | 3631123 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3628451 | 3628523 | 3628451 | ID=MS.gene20140.t1.exon9;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3628451 | 3628523 | 3628451 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3628280 | 3628350 | 3628280 | ID=MS.gene20140.t1.exon10;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3628280 | 3628350 | 3628280 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3628034 | 3628083 | 3628034 | ID=MS.gene20140.t1.exon11;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3628034 | 3628083 | 3628034 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3627800 | 3627912 | 3627800 | ID=MS.gene20140.t1.exon12;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3627800 | 3627912 | 3627800 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| chr4.4 | exon | 3627664 | 3627716 | 3627664 | ID=MS.gene20140.t1.exon13;Parent=MS.gene20140.t1 |
| chr4.4 | CDS | 3627664 | 3627716 | 3627664 | ID=cds.MS.gene20140.t1;Parent=MS.gene20140.t1 |
| Gene Sequence |
| Protein sequence |
