Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027331.t1 | XP_013448517.1 | 98.8 | 480 | 6 | 0 | 1 | 480 | 53 | 532 | 2.50E-271 | 944.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027331.t1 | Q42290 | 80.4 | 480 | 94 | 0 | 1 | 480 | 52 | 531 | 6.5e-228 | 791.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027331.t1 | A0A072TYG3 | 98.8 | 480 | 6 | 0 | 1 | 480 | 53 | 532 | 1.8e-271 | 944.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027331 | MS.gene90308 | PPI |
| MS.gene027331 | MS.gene36733 | PPI |
| MS.gene027331 | MS.gene91712 | PPI |
| MS.gene027331 | MS.gene049045 | PPI |
| MS.gene027331 | MS.gene64546 | PPI |
| MS.gene027331 | MS.gene015844 | PPI |
| MS.gene027331 | MS.gene049046 | PPI |
| MS.gene20140 | MS.gene027331 | PPI |
| MS.gene027331 | MS.gene011078 | PPI |
| MS.gene027331 | MS.gene06153 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027331.t1 | MTR_7g053330 | 98.750 | 480 | 6 | 0 | 1 | 480 | 53 | 532 | 0.0 | 991 |
| MS.gene027331.t1 | MTR_8g014660 | 31.944 | 432 | 275 | 11 | 45 | 468 | 77 | 497 | 4.96e-60 | 205 |
| MS.gene027331.t1 | MTR_8g102230 | 31.556 | 450 | 279 | 16 | 30 | 468 | 69 | 500 | 4.33e-56 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027331.t1 | AT3G02090 | 80.417 | 480 | 94 | 0 | 1 | 480 | 52 | 531 | 0.0 | 829 |
| MS.gene027331.t1 | AT3G02090 | 80.310 | 452 | 89 | 0 | 1 | 452 | 52 | 503 | 0.0 | 776 |
| MS.gene027331.t1 | AT3G16480 | 30.377 | 451 | 290 | 11 | 32 | 474 | 63 | 497 | 3.22e-52 | 184 |
| MS.gene027331.t1 | AT1G51980 | 30.536 | 429 | 281 | 12 | 47 | 469 | 79 | 496 | 3.60e-51 | 181 |
| MS.gene027331.t1 | AT1G51980 | 32.021 | 381 | 243 | 11 | 47 | 421 | 79 | 449 | 9.48e-47 | 168 |
Find 132 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCCTGGGCAGAACCATTT+TGG | 0.120950 | 7.4:+49827824 | MS.gene027331:CDS |
| GGAAGAGGAGATTGAGAATA+TGG | 0.156727 | 7.4:+49826278 | MS.gene027331:CDS |
| TTTGGAGCATATGATCTTTA+AGG | 0.160448 | 7.4:+49826227 | MS.gene027331:CDS |
| GCCTGTTGCGTTGGATATTT+TGG | 0.171866 | 7.4:+49826371 | MS.gene027331:CDS |
| AGAGTTGTGATGCGAGTTTC+AGG | 0.218151 | 7.4:-49826084 | None:intergenic |
| CGTGTGTGGTCACGGATTTC+GGG | 0.227157 | 7.4:-49826048 | None:intergenic |
| TCCTGATTCAATTGCTTTGA+TGG | 0.229373 | 7.4:+49828398 | MS.gene027331:CDS |
| GACAACCAAGTTGGCTTATC+AGG | 0.231981 | 7.4:+49829609 | MS.gene027331:CDS |
| TCGTGTGTGGTCACGGATTT+CGG | 0.234643 | 7.4:-49826049 | None:intergenic |
| GCGAAAGGGATGTTATTCTT+AGG | 0.245570 | 7.4:+49826439 | MS.gene027331:CDS |
| TCGCTTCTGCTTCACATTGA+TGG | 0.297186 | 7.4:+49830927 | MS.gene027331:CDS |
| GAGGAGGAATGCGAGGGATT+TGG | 0.298473 | 7.4:+49826257 | MS.gene027331:CDS |
| TGCAAGCAATGCTGGGTTCT+TGG | 0.313082 | 7.4:+49828424 | MS.gene027331:CDS |
| AAGACCTGTGTCCTTGTAAT+TGG | 0.332917 | 7.4:-49828635 | None:intergenic |
| CAAAGATCACTTCCTCTGTT+TGG | 0.333829 | 7.4:-49827770 | None:intergenic |
| TGGTCACGGATTTCGGGTTT+AGG | 0.334517 | 7.4:-49826042 | None:intergenic |
| GGACTGCTACCGTTGGGGTT+TGG | 0.368224 | 7.4:+49826151 | MS.gene027331:CDS |
| GGATGTTATTCTTAGGGAAA+TGG | 0.373559 | 7.4:+49826446 | MS.gene027331:CDS |
| GATCCACGTTTCCTCAAATT+CGG | 0.382243 | 7.4:+49826015 | MS.gene027331:CDS |
| GCTCAAGGACTGCTACCGTT+GGG | 0.383692 | 7.4:+49826145 | MS.gene027331:CDS |
| TTACCTTGTCATAAATAAAT+CGG | 0.386383 | 7.4:-49831325 | None:intergenic |
| TTGGAGCATATGATCTTTAA+GGG | 0.387117 | 7.4:+49826228 | MS.gene027331:CDS |
| TGCAACACGTTTAATTGTAC+TGG | 0.394685 | 7.4:-49831300 | None:intergenic |
| CTAGCAAACAATTCAGCAAA+TGG | 0.400249 | 7.4:-49831260 | None:intergenic |
| CGTCTGAACCAGTTGTAATC+AGG | 0.402332 | 7.4:-49831470 | None:intergenic |
| GATGGTCATGCAAGCAATGC+TGG | 0.404594 | 7.4:+49828416 | MS.gene027331:CDS |
| GTGGCGACACGGAGTCCGTT+AGG | 0.407403 | 7.4:-49826108 | None:intergenic |
| TTGTTTCAGCTACTCACATA+TGG | 0.411613 | 7.4:+49831227 | MS.gene027331:intron |
| ACCATCAAAGCAATTGAATC+AGG | 0.413135 | 7.4:-49828399 | None:intergenic |
| ATTCTAAGTTTGATGAGAAT+CGG | 0.421798 | 7.4:+49826409 | MS.gene027331:CDS |
| AATTTGAGGAAACGTGGATC+TGG | 0.422726 | 7.4:-49826012 | None:intergenic |
| AGCGTTTACCTGATTACAAC+TGG | 0.423477 | 7.4:+49831462 | MS.gene027331:CDS |
| AGCAACTCAGTTGGTTGAAA+AGG | 0.424795 | 7.4:+49828185 | MS.gene027331:CDS |
| TAATCAGGTAAACGCTGAAT+AGG | 0.429534 | 7.4:-49831455 | None:intergenic |
| TTCAAGGTGATAGCTGCATC+TGG | 0.431989 | 7.4:+49828090 | MS.gene027331:intron |
| CGAAAGGGATGTTATTCTTA+GGG | 0.434432 | 7.4:+49826440 | MS.gene027331:CDS |
| GCCAAAATATCCAACGCAAC+AGG | 0.437846 | 7.4:-49826372 | None:intergenic |
| GTGCTCTCAGCCGGACTGCT+TGG | 0.443674 | 7.4:+49829558 | MS.gene027331:intron |
| AGCTGAAGATATTGGTCGTC+AGG | 0.444449 | 7.4:+49830962 | MS.gene027331:CDS |
| CGACCAATATCTTCAGCTAC+AGG | 0.448715 | 7.4:-49830957 | None:intergenic |
| GTTCTGAGCAGGTCCCAAAA+TGG | 0.463542 | 7.4:-49827838 | None:intergenic |
| CGCTTTCCAGTACACTCCCC+TGG | 0.464474 | 7.4:+49827809 | MS.gene027331:CDS |
| GGTTCAGACGCAGAACCTAC+TGG | 0.465267 | 7.4:+49831483 | MS.gene027331:CDS |
| TATTCCTCTTGCACAATTTG+CGG | 0.470822 | 7.4:+49828347 | MS.gene027331:CDS |
| GTCCCAAAATGGTTCTGCCC+AGG | 0.470877 | 7.4:-49827827 | None:intergenic |
| TAGCAAACAATTCAGCAAAT+GGG | 0.475811 | 7.4:-49831259 | None:intergenic |
| TTCTGCCCAGGGGAGTGTAC+TGG | 0.482436 | 7.4:-49827815 | None:intergenic |
| GAAGAGGAGATTGAGAATAT+GGG | 0.483391 | 7.4:+49826279 | MS.gene027331:CDS |
| TGTTACGCGTGCTCGCAATC+AGG | 0.484599 | 7.4:+49829645 | MS.gene027331:CDS |
| AGCCCTGTAGCTGAAGATAT+TGG | 0.489455 | 7.4:+49830954 | MS.gene027331:CDS |
| GTTGGGGTTTGGATCGATGC+GGG | 0.489929 | 7.4:+49826162 | MS.gene027331:CDS |
| GAATGCGAGGGATTTGGAAG+AGG | 0.493011 | 7.4:+49826263 | MS.gene027331:CDS |
| AGCTCAAGGACTGCTACCGT+TGG | 0.495823 | 7.4:+49826144 | MS.gene027331:CDS |
| GGCTTTCAACACCAATTACA+AGG | 0.496777 | 7.4:+49828624 | MS.gene027331:CDS |
| GTTTAGGTGAACCGAATTTG+AGG | 0.498343 | 7.4:-49826026 | None:intergenic |
| ACAGACTACTTATTATGCTA+AGG | 0.499150 | 7.4:+49826332 | MS.gene027331:CDS |
| GGATGTTGCTATTGCTGCCA+TGG | 0.504114 | 7.4:+49831430 | MS.gene027331:intron |
| GACAAATCATCCAAGCAGTC+CGG | 0.513338 | 7.4:-49829568 | None:intergenic |
| GTAATCCTGTAGATGAGCTT+TGG | 0.516737 | 7.4:-49827874 | None:intergenic |
| AGAGGATTCGTGTGTGGTCA+CGG | 0.519419 | 7.4:-49826056 | None:intergenic |
| ATTGTCTTGATGTTCTGAGC+AGG | 0.521092 | 7.4:-49827849 | None:intergenic |
| TTCAACCAACTGAGTTGCTG+TGG | 0.525634 | 7.4:-49828181 | None:intergenic |
| TGGCGACACGGAGTCCGTTA+GGG | 0.529967 | 7.4:-49826107 | None:intergenic |
| ATTTGAATGCGTATACTTCG+AGG | 0.530212 | 7.4:+49826307 | MS.gene027331:CDS |
| GGTGGGATTTGTTGACAACT+TGG | 0.537207 | 7.4:-49828160 | None:intergenic |
| TATTCTTAGGGAAATGGAAG+AGG | 0.540857 | 7.4:+49826452 | MS.gene027331:CDS |
| AATCACCAAAGCTCATCTAC+AGG | 0.542257 | 7.4:+49827869 | MS.gene027331:CDS |
| TCCCAAAATGGTTCTGCCCA+GGG | 0.542944 | 7.4:-49827826 | None:intergenic |
| CTCAAGGACTGCTACCGTTG+GGG | 0.547160 | 7.4:+49826146 | MS.gene027331:CDS |
| AATGTATGAGACAACCAAGT+TGG | 0.550313 | 7.4:+49829600 | MS.gene027331:CDS |
| TGGTGTTTATGCTGTCGCTA+AGG | 0.550888 | 7.4:+49828660 | MS.gene027331:CDS |
| GAATCGGATTAGTCGCGAAA+GGG | 0.552226 | 7.4:+49826425 | MS.gene027331:CDS |
| TGAAACCTGATAAGCCAACT+TGG | 0.560316 | 7.4:-49829614 | None:intergenic |
| GCTACCGCAAATTGTGCAAG+AGG | 0.561891 | 7.4:-49828351 | None:intergenic |
| TGGAATAAGACAGCAGGAGG+GGG | 0.561986 | 7.4:+49828444 | MS.gene027331:CDS |
| GTTTATCTACATACCATCCT+AGG | 0.561990 | 7.4:-49827918 | None:intergenic |
| TGAAGTTGCAGAAAGCATGA+TGG | 0.563113 | 7.4:+49828603 | MS.gene027331:CDS |
| AGACACATTACACTGCTCCT+AGG | 0.563685 | 7.4:+49827901 | MS.gene027331:CDS |
| GGACGGAGAGGAGGAATGCG+AGG | 0.564393 | 7.4:+49826250 | MS.gene027331:CDS |
| CGGTAGCAGTCCTTGAGCTA+AGG | 0.566416 | 7.4:-49826140 | None:intergenic |
| GGCTAGACTCCGTGGCGACA+CGG | 0.568095 | 7.4:-49826119 | None:intergenic |
| TATTATGCTAAGGTTTCGCA+AGG | 0.570942 | 7.4:+49826342 | MS.gene027331:CDS |
| AGGGGATGTGCCTGTTGCGT+TGG | 0.572773 | 7.4:+49826362 | MS.gene027331:CDS |
| ACTGGAAAGCGGTTGCGTGT+AGG | 0.574119 | 7.4:-49827797 | None:intergenic |
| ATGGTCATGCAAGCAATGCT+GGG | 0.578859 | 7.4:+49828417 | MS.gene027331:CDS |
| TTCGAGACGGAGGAGAGTAA+TGG | 0.579054 | 7.4:+49826192 | MS.gene027331:CDS |
| TTATGCTAAGGTTTCGCAAG+GGG | 0.582967 | 7.4:+49826344 | MS.gene027331:CDS |
| GCATATGATCTTTAAGGGGA+CGG | 0.584800 | 7.4:+49826233 | MS.gene027331:CDS |
| GTTGGCTTATCAGGTTTCAG+AGG | 0.585578 | 7.4:+49829618 | MS.gene027331:CDS |
| GGTTCTTGGAATAAGACAGC+AGG | 0.587947 | 7.4:+49828438 | MS.gene027331:CDS |
| GGAAAGCGGTTGCGTGTAGG+TGG | 0.597858 | 7.4:-49827794 | None:intergenic |
| GAGGAGATTGAGAATATGGG+TGG | 0.598135 | 7.4:+49826282 | MS.gene027331:CDS |
| TAACGGACTCCGTGTCGCCA+CGG | 0.602370 | 7.4:+49826110 | MS.gene027331:CDS |
| GATGTTGCTATTGCTGCCAT+GGG | 0.603073 | 7.4:+49831431 | MS.gene027331:CDS |
| AACCAACTGAGTTGCTGTGG+TGG | 0.603366 | 7.4:-49828178 | None:intergenic |
| AGAATCGGATTAGTCGCGAA+AGG | 0.603687 | 7.4:+49826424 | MS.gene027331:CDS |
| TCTGAGCTAGCACAGCGAGT+TGG | 0.603978 | 7.4:+49828574 | MS.gene027331:CDS |
| TCTTTAAGGGGACGGAGAGG+AGG | 0.607119 | 7.4:+49826241 | MS.gene027331:CDS |
| ACCAACTGAGTTGCTGTGGT+GGG | 0.607905 | 7.4:-49828177 | None:intergenic |
| GAACTAATAGCGGTTCCAGT+AGG | 0.607907 | 7.4:-49831498 | None:intergenic |
| CGGAGTCTAGCCTTAGCTCA+AGG | 0.608477 | 7.4:+49826130 | MS.gene027331:CDS |
| ACATTACACTGCTCCTAGGA+TGG | 0.609322 | 7.4:+49827905 | MS.gene027331:CDS |
| TGGAGCATATGATCTTTAAG+GGG | 0.611078 | 7.4:+49826229 | MS.gene027331:CDS |
| AGGAGATTGAGAATATGGGT+GGG | 0.612564 | 7.4:+49826283 | MS.gene027331:CDS |
| CGCATCACAACTCTCCCTAA+CGG | 0.612727 | 7.4:+49826093 | MS.gene027331:CDS |
| ATTATGCTAAGGTTTCGCAA+GGG | 0.613708 | 7.4:+49826343 | MS.gene027331:CDS |
| TTTGAATGCGTATACTTCGA+GGG | 0.614315 | 7.4:+49826308 | MS.gene027331:CDS |
| CGTTGGGGTTTGGATCGATG+CGG | 0.614454 | 7.4:+49826161 | MS.gene027331:CDS |
| CCCAAAATGGTTCTGCCCAG+GGG | 0.616237 | 7.4:-49827825 | None:intergenic |
| AAACCGATTTATTTATGACA+AGG | 0.619571 | 7.4:+49831322 | MS.gene027331:CDS |
| TCCCACCACAGCAACTCAGT+TGG | 0.620192 | 7.4:+49828176 | MS.gene027331:CDS |
| TCTTGGAATAAGACAGCAGG+AGG | 0.621637 | 7.4:+49828441 | MS.gene027331:CDS |
| GACGGAGAGGAGGAATGCGA+GGG | 0.628316 | 7.4:+49826251 | MS.gene027331:CDS |
| AACACCAATTACAAGGACAC+AGG | 0.628318 | 7.4:+49828631 | MS.gene027331:CDS |
| GCTTTCCAGTACACTCCCCT+GGG | 0.629104 | 7.4:+49827810 | MS.gene027331:CDS |
| GACGGAGGAGAGTAATGGAA+CGG | 0.634644 | 7.4:+49826197 | MS.gene027331:CDS |
| TTGGAATAAGACAGCAGGAG+GGG | 0.635884 | 7.4:+49828443 | MS.gene027331:CDS |
| GACCAATATCTTCAGCTACA+GGG | 0.642469 | 7.4:-49830956 | None:intergenic |
| AAACTAAGATGAACTAATAG+CGG | 0.642849 | 7.4:-49831508 | None:intergenic |
| CTTGGAATAAGACAGCAGGA+GGG | 0.645316 | 7.4:+49828442 | MS.gene027331:CDS |
| TAAACGCTGAATAGGTCCCA+TGG | 0.648283 | 7.4:-49831447 | None:intergenic |
| CAGGGGAGTGTACTGGAAAG+CGG | 0.651785 | 7.4:-49827808 | None:intergenic |
| CGCATCGATCCAAACCCCAA+CGG | 0.656378 | 7.4:-49826160 | None:intergenic |
| GAGCGGAGAGGATTCGTGTG+TGG | 0.666040 | 7.4:-49826062 | None:intergenic |
| TGCGGGTTCGAGATTCGAGA+CGG | 0.666927 | 7.4:+49826179 | MS.gene027331:CDS |
| TGCGAGTTTCAGGAGCGGAG+AGG | 0.669751 | 7.4:-49826074 | None:intergenic |
| TGTGATGCGAGTTTCAGGAG+CGG | 0.673954 | 7.4:-49826079 | None:intergenic |
| TGAGCTAAGGCTAGACTCCG+TGG | 0.675517 | 7.4:-49826127 | None:intergenic |
| GAACCGAATTTGAGGAAACG+TGG | 0.678087 | 7.4:-49826018 | None:intergenic |
| GTAGGTTGAGGGCCAAACAG+AGG | 0.679038 | 7.4:+49827758 | MS.gene027331:intron |
| TGATCTTTAAGGGGACGGAG+AGG | 0.685902 | 7.4:+49826238 | MS.gene027331:CDS |
| GGGTTCGAGATTCGAGACGG+AGG | 0.712774 | 7.4:+49826182 | MS.gene027331:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGTATGAAATATTAAA+TGG | - | chr7.4:49831199-49831218 | None:intergenic | 10.0% |
| !! | TATAATATTTAACAAAACTA+AGG | - | chr7.4:49828954-49828973 | None:intergenic | 10.0% |
| !! | TGCAAATTAAATTAATTTAT+GGG | + | chr7.4:49830226-49830245 | MS.gene027331:intron | 10.0% |
| !! | TTAAATATTATAACCTATAA+TGG | + | chr7.4:49828962-49828981 | MS.gene027331:intron | 10.0% |
| !!! | GTAAAAAAAATTAGATTTTA+AGG | + | chr7.4:49827082-49827101 | MS.gene027331:intron | 10.0% |
| !!! | TAATTTTTATCATTCAAAAT+TGG | - | chr7.4:49830118-49830137 | None:intergenic | 10.0% |
| !! | ATTATTACAACAACAAATAT+CGG | - | chr7.4:49827363-49827382 | None:intergenic | 15.0% |
| !! | CAAATTAAATTAATTTATGG+GGG | + | chr7.4:49830228-49830247 | MS.gene027331:intron | 15.0% |
| !! | GCAAATTAAATTAATTTATG+GGG | + | chr7.4:49830227-49830246 | MS.gene027331:intron | 15.0% |
| !! | GTGCAAATTAAATTAATTTA+TGG | + | chr7.4:49830225-49830244 | MS.gene027331:intron | 15.0% |
| !! | GTTGTTGTAATAATAATAAT+TGG | + | chr7.4:49827369-49827388 | MS.gene027331:intron | 15.0% |
| !! | TAATATATAAATATGGAAGT+TGG | + | chr7.4:49828036-49828055 | MS.gene027331:intron | 15.0% |
| !! | TTATCATTTATAATTCTAGA+AGG | + | chr7.4:49827612-49827631 | MS.gene027331:intron | 15.0% |
| !!! | ATTTTTTTTACTCATTGTAA+AGG | - | chr7.4:49827073-49827092 | None:intergenic | 15.0% |
| !!! | TTTGAAACTATAATAGTTAA+TGG | + | chr7.4:49829245-49829264 | MS.gene027331:intron | 15.0% |
| !! | AATAAATCAACTATATCAAC+AGG | - | chr7.4:49828276-49828295 | None:intergenic | 20.0% |
| !! | AATTATAGTCCAATAGATAA+AGG | + | chr7.4:49827507-49827526 | MS.gene027331:intron | 20.0% |
| !! | AGGAGAAAAGAAATTATATT+TGG | - | chr7.4:49829185-49829204 | None:intergenic | 20.0% |
| !! | ATGAAAAATCAAGACAAAAT+AGG | - | chr7.4:49827684-49827703 | None:intergenic | 20.0% |
| !! | TATGAAAAAACAACTTATGA+AGG | + | chr7.4:49826850-49826869 | MS.gene027331:intron | 20.0% |
| !! | TTACCTTGTCATAAATAAAT+CGG | - | chr7.4:49831328-49831347 | None:intergenic | 20.0% |
| !!! | AATTATTGCGATTTTTTTGT+GGG | + | chr7.4:49826774-49826793 | MS.gene027331:intron | 20.0% |
| !!! | ATTTTGAAGCCTTTTTTATT+TGG | + | chr7.4:49827266-49827285 | MS.gene027331:intron | 20.0% |
| !!! | CTATAGAGTTAATTTTGTTT+TGG | + | chr7.4:49829781-49829800 | MS.gene027331:intron | 20.0% |
| !!! | GATTTCTAAATCCTTTTTAA+AGG | - | chr7.4:49827553-49827572 | None:intergenic | 20.0% |
| !!! | TAAATGATATTGCTTTTTGT+AGG | + | chr7.4:49827740-49827759 | MS.gene027331:intron | 20.0% |
| !!! | TTATGAGCTATATTTTACAT+TGG | - | chr7.4:49827482-49827501 | None:intergenic | 20.0% |
| !!! | TTTTTATCATTCAAAATTGG+TGG | - | chr7.4:49830115-49830134 | None:intergenic | 20.0% |
| ! | AAAAAGGCTTCAAAATAGAA+TGG | - | chr7.4:49827262-49827281 | None:intergenic | 25.0% |
| ! | AAAATATACAAATCGAGTAC+AGG | - | chr7.4:49828012-49828031 | None:intergenic | 25.0% |
| ! | AGGTTATTTAACAAATTCAG+TGG | - | chr7.4:49829004-49829023 | None:intergenic | 25.0% |
| ! | AGTAACTAAGAATTAGATTG+AGG | - | chr7.4:49829900-49829919 | None:intergenic | 25.0% |
| ! | ATCCATAAGAAAAGCAAATT+AGG | - | chr7.4:49828691-49828710 | None:intergenic | 25.0% |
| ! | ATCTATGAAAAACTACAAGA+GGG | - | chr7.4:49828818-49828837 | None:intergenic | 25.0% |
| ! | ATTCTAAGTTTGATGAGAAT+CGG | + | chr7.4:49826409-49826428 | MS.gene027331:CDS | 25.0% |
| ! | CATTCAAACTAAATTTGTGA+TGG | + | chr7.4:49830625-49830644 | MS.gene027331:intron | 25.0% |
| ! | CTAATTTATTTGCCCAAAAT+AGG | - | chr7.4:49826821-49826840 | None:intergenic | 25.0% |
| ! | GGATTTAGAAATCAGAAAAA+AGG | + | chr7.4:49827560-49827579 | MS.gene027331:intron | 25.0% |
| ! | TAAAGAAAGACCACAAAATA+TGG | - | chr7.4:49830193-49830212 | None:intergenic | 25.0% |
| ! | TACTATTATACAAGGACTTT+AGG | + | chr7.4:49831046-49831065 | MS.gene027331:intron | 25.0% |
| ! | TATCTATGAAAAACTACAAG+AGG | - | chr7.4:49828819-49828838 | None:intergenic | 25.0% |
| ! | TATCTTCAATAGACCATTAT+AGG | - | chr7.4:49828978-49828997 | None:intergenic | 25.0% |
| ! | TCATTCTCTACTATTATACA+AGG | + | chr7.4:49831038-49831057 | MS.gene027331:intron | 25.0% |
| ! | TCTAAAAGTTGGATCATTAA+AGG | - | chr7.4:49829024-49829043 | None:intergenic | 25.0% |
| ! | TCTACACATCCAAATAAAAA+AGG | - | chr7.4:49827278-49827297 | None:intergenic | 25.0% |
| ! | TGCTTTATATTAAGAAGCTT+TGG | + | chr7.4:49829734-49829753 | MS.gene027331:intron | 25.0% |
| ! | TGTTAAACAAAGTAGTACAT+TGG | + | chr7.4:49828715-49828734 | MS.gene027331:intron | 25.0% |
| ! | TTGAATATGACAATGGAATT+TGG | + | chr7.4:49829707-49829726 | MS.gene027331:intron | 25.0% |
| ! | TTGCTAATTGAATATGACAA+TGG | + | chr7.4:49829700-49829719 | MS.gene027331:intron | 25.0% |
| ! | TTGTATTAGTAATGAGTTTC+AGG | + | chr7.4:49827584-49827603 | MS.gene027331:intron | 25.0% |
| !! | AAACCGATTTATTTATGACA+AGG | + | chr7.4:49831322-49831341 | MS.gene027331:CDS | 25.0% |
| !! | ACACATATACTTCTAAAAGT+TGG | - | chr7.4:49829035-49829054 | None:intergenic | 25.0% |
| !! | ATTTATGATGCCATATTTTG+TGG | + | chr7.4:49830180-49830199 | MS.gene027331:intron | 25.0% |
| !! | GTCTTGATTTTTCATTTGTT+TGG | + | chr7.4:49827689-49827708 | MS.gene027331:intron | 25.0% |
| !! | TGTTTTCATGCTCTTAATTT+TGG | + | chr7.4:49830503-49830522 | MS.gene027331:intron | 25.0% |
| !! | TTAACTCTATAGTCGTATTT+TGG | - | chr7.4:49829773-49829792 | None:intergenic | 25.0% |
| !!! | AATTTTACTTTGTTGATTGG+GGG | - | chr7.4:49828505-49828524 | None:intergenic | 25.0% |
| !!! | ATTGAGGAAGTATTGAATTT+AGG | - | chr7.4:49829884-49829903 | None:intergenic | 25.0% |
| !!! | GAAGTATTGAATTTAGGTTA+TGG | - | chr7.4:49829878-49829897 | None:intergenic | 25.0% |
| !!! | GAATTATTGCGATTTTTTTG+TGG | + | chr7.4:49826773-49826792 | MS.gene027331:intron | 25.0% |
| !!! | GAATTTTACTTTGTTGATTG+GGG | - | chr7.4:49828506-49828525 | None:intergenic | 25.0% |
| !!! | GGAATTTTACTTTGTTGATT+GGG | - | chr7.4:49828507-49828526 | None:intergenic | 25.0% |
| !!! | GGTAAGCATTTTAACTAAAT+TGG | - | chr7.4:49830547-49830566 | None:intergenic | 25.0% |
| !!! | GTTGTATTTAACTTGTCAAT+CGG | + | chr7.4:49828872-49828891 | MS.gene027331:intron | 25.0% |
| !!! | TGGCTTATTTTTTTAGCTTA+TGG | - | chr7.4:49826929-49826948 | None:intergenic | 25.0% |
| !!! | TTTTAGTTAGATTCAGTGAT+TGG | + | chr7.4:49829061-49829080 | MS.gene027331:intron | 25.0% |
| AAAAACAGCATAGATGTTTG+AGG | - | chr7.4:49830777-49830796 | None:intergenic | 30.0% | |
| AAAAATAAAGTAGAAGCCCT+TGG | - | chr7.4:49829213-49829232 | None:intergenic | 30.0% | |
| AAAACAAGCTTTCAGAACTA+TGG | - | chr7.4:49827981-49828000 | None:intergenic | 30.0% | |
| AAGAGGGATATATGTTCATT+TGG | - | chr7.4:49828802-49828821 | None:intergenic | 30.0% | |
| ACAGACTACTTATTATGCTA+AGG | + | chr7.4:49826332-49826351 | MS.gene027331:CDS | 30.0% | |
| AGAATCTCTTGTTGAATAGA+TGG | + | chr7.4:49827421-49827440 | MS.gene027331:intron | 30.0% | |
| AGATTATGTGCAGAATATGA+AGG | + | chr7.4:49830666-49830685 | MS.gene027331:intron | 30.0% | |
| ATGTCTTTCTATGCAATATG+TGG | + | chr7.4:49829398-49829417 | MS.gene027331:intron | 30.0% | |
| ATGTGTAGAAGTTGTAGTAT+TGG | + | chr7.4:49827289-49827308 | MS.gene027331:intron | 30.0% | |
| ATTACAACAACAAATATCGG+TGG | - | chr7.4:49827360-49827379 | None:intergenic | 30.0% | |
| CCATTAGCACTTAAAAAGAT+TGG | - | chr7.4:49831389-49831408 | None:intergenic | 30.0% | |
| CTTATGTCTTTCTATGCAAT+AGG | + | chr7.4:49829330-49829349 | MS.gene027331:intron | 30.0% | |
| GAATATATCCAACTAAGTCT+TGG | + | chr7.4:49830295-49830314 | MS.gene027331:intron | 30.0% | |
| TAAGCAAAGCATGTATCATT+GGG | - | chr7.4:49828530-49828549 | None:intergenic | 30.0% | |
| TAGCAAACAATTCAGCAAAT+GGG | - | chr7.4:49831262-49831281 | None:intergenic | 30.0% | |
| TCAACTGAGCTCAATATTAT+TGG | - | chr7.4:49828252-49828271 | None:intergenic | 30.0% | |
| TCATATTCAATTAGCAAGAC+AGG | - | chr7.4:49829697-49829716 | None:intergenic | 30.0% | |
| TCTACTCTACCTTTATCTAT+TGG | - | chr7.4:49827519-49827538 | None:intergenic | 30.0% | |
| TTACAACAACAAATATCGGT+GGG | - | chr7.4:49827359-49827378 | None:intergenic | 30.0% | |
| TTGAACGTGCTAATTCAATT+TGG | - | chr7.4:49830587-49830606 | None:intergenic | 30.0% | |
| TTGGAGCATATGATCTTTAA+GGG | + | chr7.4:49826228-49826247 | MS.gene027331:CDS | 30.0% | |
| ! | CCACAGAAAAACCTTTAAAA+AGG | + | chr7.4:49827539-49827558 | MS.gene027331:intron | 30.0% |
| ! | GGGAATTTTACTTTGTTGAT+TGG | - | chr7.4:49828508-49828527 | None:intergenic | 30.0% |
| ! | GTTACTAGTTTCTTGAAGAT+AGG | + | chr7.4:49829914-49829933 | MS.gene027331:intron | 30.0% |
| ! | TCTTTTCTCCTTTTATCCAA+GGG | + | chr7.4:49829194-49829213 | MS.gene027331:intron | 30.0% |
| ! | TTCTGCACATAATCTTTTGA+AGG | - | chr7.4:49830661-49830680 | None:intergenic | 30.0% |
| ! | TTCTTTTCTCCTTTTATCCA+AGG | + | chr7.4:49829193-49829212 | MS.gene027331:intron | 30.0% |
| ! | TTTGGAGCATATGATCTTTA+AGG | + | chr7.4:49826227-49826246 | MS.gene027331:CDS | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr7.4:49826606-49826625 | MS.gene027331:intron | 30.0% |
| !! | CCTTTTTAAAGGTTTTTCTG+TGG | - | chr7.4:49827542-49827561 | None:intergenic | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr7.4:49826607-49826626 | MS.gene027331:intron | 30.0% |
| !! | TGAGATTTTAGAGACAATGT+CGG | + | chr7.4:49827395-49827414 | MS.gene027331:intron | 30.0% |
| !! | TTTAACATGTTTGTTGTGAG+TGG | + | chr7.4:49826550-49826569 | MS.gene027331:intron | 30.0% |
| !!! | ATATTGCTTTTTGTAGGTTG+AGG | + | chr7.4:49827746-49827765 | MS.gene027331:intron | 30.0% |
| !!! | ATCAGCTGTTTTTAGCTTAT+GGG | + | chr7.4:49826649-49826668 | MS.gene027331:intron | 30.0% |
| !!! | CCAATCTTTTTAAGTGCTAA+TGG | + | chr7.4:49831386-49831405 | MS.gene027331:intron | 30.0% |
| !!! | CGATTTTTTTGTGGGATTTT+GGG | + | chr7.4:49826782-49826801 | MS.gene027331:intron | 30.0% |
| !!! | GACCTAATTTGCTTTTCTTA+TGG | + | chr7.4:49828686-49828705 | MS.gene027331:intron | 30.0% |
| !!! | TATCAGCTGTTTTTAGCTTA+TGG | + | chr7.4:49826648-49826667 | MS.gene027331:intron | 30.0% |
| !!! | TATTGCTTTTTGTAGGTTGA+GGG | + | chr7.4:49827747-49827766 | MS.gene027331:intron | 30.0% |
| AAGCAAAGCATGTATCATTG+GGG | - | chr7.4:49828529-49828548 | None:intergenic | 35.0% | |
| AATGTATGAGACAACCAAGT+TGG | + | chr7.4:49829600-49829619 | MS.gene027331:CDS | 35.0% | |
| ACAGCAATAAGCTATGAATC+AGG | - | chr7.4:49830411-49830430 | None:intergenic | 35.0% | |
| ACCATCAAAGCAATTGAATC+AGG | - | chr7.4:49828402-49828421 | None:intergenic | 35.0% | |
| ATCACTAACCAAGACTTAGT+TGG | - | chr7.4:49830306-49830325 | None:intergenic | 35.0% | |
| ATGTCTTTCTATGCAATAGG+TGG | + | chr7.4:49829333-49829352 | MS.gene027331:intron | 35.0% | |
| ATTATGCTAAGGTTTCGCAA+GGG | + | chr7.4:49826343-49826362 | MS.gene027331:CDS | 35.0% | |
| ATTTGAATGCGTATACTTCG+AGG | + | chr7.4:49826307-49826326 | MS.gene027331:CDS | 35.0% | |
| CAATAAGCTATGAATCAGGA+AGG | - | chr7.4:49830407-49830426 | None:intergenic | 35.0% | |
| CAGAACTATGGATACTATAC+AGG | - | chr7.4:49827969-49827988 | None:intergenic | 35.0% | |
| CATGGGTGAAATTTGAATCA+CGG | - | chr7.4:49829953-49829972 | None:intergenic | 35.0% | |
| CGAAAGGGATGTTATTCTTA+GGG | + | chr7.4:49826440-49826459 | MS.gene027331:CDS | 35.0% | |
| CTAGCAAACAATTCAGCAAA+TGG | - | chr7.4:49831263-49831282 | None:intergenic | 35.0% | |
| GAACAATCCAATGAACTACT+AGG | - | chr7.4:49830738-49830757 | None:intergenic | 35.0% | |
| GAAGAGGAGATTGAGAATAT+GGG | + | chr7.4:49826279-49826298 | MS.gene027331:CDS | 35.0% | |
| GGATGTTATTCTTAGGGAAA+TGG | + | chr7.4:49826446-49826465 | MS.gene027331:CDS | 35.0% | |
| GTAAGCAAAGCATGTATCAT+TGG | - | chr7.4:49828531-49828550 | None:intergenic | 35.0% | |
| GTGCTAATTCAATTTGGCAT+GGG | - | chr7.4:49830581-49830600 | None:intergenic | 35.0% | |
| GTTGAATAGATGGTAGAATG+TGG | + | chr7.4:49827431-49827450 | MS.gene027331:intron | 35.0% | |
| GTTTAGCATATTGCATCATC+TGG | + | chr7.4:49829813-49829832 | MS.gene027331:intron | 35.0% | |
| GTTTATCTACATACCATCCT+AGG | - | chr7.4:49827921-49827940 | None:intergenic | 35.0% | |
| TAATCAGGTAAACGCTGAAT+AGG | - | chr7.4:49831458-49831477 | None:intergenic | 35.0% | |
| TATTATGCTAAGGTTTCGCA+AGG | + | chr7.4:49826342-49826361 | MS.gene027331:CDS | 35.0% | |
| TATTCCTCTTGCACAATTTG+CGG | + | chr7.4:49828347-49828366 | MS.gene027331:CDS | 35.0% | |
| TATTCTTAGGGAAATGGAAG+AGG | + | chr7.4:49826452-49826471 | MS.gene027331:CDS | 35.0% | |
| TCAGAACCAGTAAAAATTGC+AGG | - | chr7.4:49828213-49828232 | None:intergenic | 35.0% | |
| TCCTGATTCAATTGCTTTGA+TGG | + | chr7.4:49828398-49828417 | MS.gene027331:CDS | 35.0% | |
| TCTTTCTATGCAATATGTGG+TGG | + | chr7.4:49829401-49829420 | MS.gene027331:intron | 35.0% | |
| TGCAACACGTTTAATTGTAC+TGG | - | chr7.4:49831303-49831322 | None:intergenic | 35.0% | |
| TGGAGCATATGATCTTTAAG+GGG | + | chr7.4:49826229-49826248 | MS.gene027331:CDS | 35.0% | |
| TTGGCATGGGTAGATAAATT+TGG | - | chr7.4:49830568-49830587 | None:intergenic | 35.0% | |
| TTGTTTCAGCTACTCACATA+TGG | + | chr7.4:49831227-49831246 | MS.gene027331:intron | 35.0% | |
| TTTGAATGCGTATACTTCGA+GGG | + | chr7.4:49826308-49826327 | MS.gene027331:CDS | 35.0% | |
| ! | AAATTGGTGGCATTATGTCA+TGG | - | chr7.4:49830102-49830121 | None:intergenic | 35.0% |
| ! | AAGGAACCTGCAATTTTTAC+TGG | + | chr7.4:49828204-49828223 | MS.gene027331:CDS | 35.0% |
| ! | AATCCTGTTTTGTGTGTTCA+AGG | + | chr7.4:49826987-49827006 | MS.gene027331:intron | 35.0% |
| ! | ACTCGTTTTGTAAACAGGTT+CGG | + | chr7.4:49828310-49828329 | MS.gene027331:intron | 35.0% |
| ! | ATGAATCCAGAGGTGTAAAA+TGG | + | chr7.4:49830435-49830454 | MS.gene027331:intron | 35.0% |
| ! | GTTCTCATTCTTTTGCTGAA+AGG | + | chr7.4:49827711-49827730 | MS.gene027331:intron | 35.0% |
| ! | TAGATGTTTGAGGAGTATGA+AGG | - | chr7.4:49830767-49830786 | None:intergenic | 35.0% |
| ! | TGAATCCAGAGGTGTAAAAT+GGG | + | chr7.4:49830436-49830455 | MS.gene027331:intron | 35.0% |
| !! | AAGTTGTAGTATTGGCAGTT+AGG | + | chr7.4:49827297-49827316 | MS.gene027331:intron | 35.0% |
| !! | AGATTTTAGAGACAATGTCG+GGG | + | chr7.4:49827397-49827416 | MS.gene027331:intron | 35.0% |
| !! | AGTTGTAGTATTGGCAGTTA+GGG | + | chr7.4:49827298-49827317 | MS.gene027331:intron | 35.0% |
| !! | CAACTGACATTTGTTGTCAT+TGG | + | chr7.4:49830152-49830171 | MS.gene027331:intron | 35.0% |
| !! | GAGATTTTAGAGACAATGTC+GGG | + | chr7.4:49827396-49827415 | MS.gene027331:intron | 35.0% |
| !!! | GAGTTTTTGTTTGACGGATT+CGG | - | chr7.4:49825977-49825996 | None:intergenic | 35.0% |
| !!! | GCGATTTTTTTGTGGGATTT+TGG | + | chr7.4:49826781-49826800 | MS.gene027331:intron | 35.0% |
| !!! | TGCAATTTTTACTGGTTCTG+AGG | + | chr7.4:49828212-49828231 | MS.gene027331:CDS | 35.0% |
| !!! | TGTTTGGATTGGCCTATTTT+GGG | + | chr7.4:49826806-49826825 | MS.gene027331:intron | 35.0% |
| AACACCAATTACAAGGACAC+AGG | + | chr7.4:49828631-49828650 | MS.gene027331:CDS | 40.0% | |
| AAGACCTGTGTCCTTGTAAT+TGG | - | chr7.4:49828638-49828657 | None:intergenic | 40.0% | |
| AATCACCAAAGCTCATCTAC+AGG | + | chr7.4:49827869-49827888 | MS.gene027331:CDS | 40.0% | |
| AATGCACTACGTGAGATGTA+AGG | - | chr7.4:49830997-49831016 | None:intergenic | 40.0% | |
| AATTTGAGGAAACGTGGATC+TGG | - | chr7.4:49826015-49826034 | None:intergenic | 40.0% | |
| AGATGGTAGAATGTGGAAAC+AGG | + | chr7.4:49827438-49827457 | MS.gene027331:intron | 40.0% | |
| AGCAAAGCATGTATCATTGG+GGG | - | chr7.4:49828528-49828547 | None:intergenic | 40.0% | |
| AGCAACTCAGTTGGTTGAAA+AGG | + | chr7.4:49828185-49828204 | MS.gene027331:CDS | 40.0% | |
| AGCGTTTACCTGATTACAAC+TGG | + | chr7.4:49831462-49831481 | MS.gene027331:CDS | 40.0% | |
| AGGAGATTGAGAATATGGGT+GGG | + | chr7.4:49826283-49826302 | MS.gene027331:CDS | 40.0% | |
| AGTAGAAGCCCTTGGATAAA+AGG | - | chr7.4:49829205-49829224 | None:intergenic | 40.0% | |
| ATGAACTACTAGGCATACCA+AGG | - | chr7.4:49830728-49830747 | None:intergenic | 40.0% | |
| CAAAGATCACTTCCTCTGTT+TGG | - | chr7.4:49827773-49827792 | None:intergenic | 40.0% | |
| CATCCTTGAACACACAAAAC+AGG | - | chr7.4:49826993-49827012 | None:intergenic | 40.0% | |
| CGTGCTAATTCAATTTGGCA+TGG | - | chr7.4:49830582-49830601 | None:intergenic | 40.0% | |
| CTGTTTACAAAACGAGTCGA+TGG | - | chr7.4:49828307-49828326 | None:intergenic | 40.0% | |
| GACCAATATCTTCAGCTACA+GGG | - | chr7.4:49830959-49830978 | None:intergenic | 40.0% | |
| GATCCACGTTTCCTCAAATT+CGG | + | chr7.4:49826015-49826034 | MS.gene027331:CDS | 40.0% | |
| GCGAAAGGGATGTTATTCTT+AGG | + | chr7.4:49826439-49826458 | MS.gene027331:CDS | 40.0% | |
| GGAAGAGGAGATTGAGAATA+TGG | + | chr7.4:49826278-49826297 | MS.gene027331:CDS | 40.0% | |
| GGCTTTCAACACCAATTACA+AGG | + | chr7.4:49828624-49828643 | MS.gene027331:CDS | 40.0% | |
| GTAATCCTGTAGATGAGCTT+TGG | - | chr7.4:49827877-49827896 | None:intergenic | 40.0% | |
| GTGTCTTTCTTCGCAATATG+CGG | + | chr7.4:49829267-49829286 | MS.gene027331:intron | 40.0% | |
| GTTCGTCAAAATAGAGTTGC+AGG | - | chr7.4:49829851-49829870 | None:intergenic | 40.0% | |
| GTTTAGGTGAACCGAATTTG+AGG | - | chr7.4:49826029-49826048 | None:intergenic | 40.0% | |
| TACGTGAGATGTAAGGTCTA+TGG | - | chr7.4:49830990-49831009 | None:intergenic | 40.0% | |
| TAGCACAAACATTTAGCCCT+TGG | + | chr7.4:49830708-49830727 | MS.gene027331:intron | 40.0% | |
| TAGTGATCACGTTTGTGACA+TGG | + | chr7.4:49830319-49830338 | MS.gene027331:intron | 40.0% | |
| TCATTTCATGTCTGTCTTGC+AGG | + | chr7.4:49831409-49831428 | MS.gene027331:intron | 40.0% | |
| TCTTTCTATGCAATAGGTGG+TGG | + | chr7.4:49829336-49829355 | MS.gene027331:intron | 40.0% | |
| TGAAACCTGATAAGCCAACT+TGG | - | chr7.4:49829617-49829636 | None:intergenic | 40.0% | |
| TGAACTACTAGGCATACCAA+GGG | - | chr7.4:49830727-49830746 | None:intergenic | 40.0% | |
| TGCTGTGTTAATGAATCCAG+AGG | + | chr7.4:49830425-49830444 | MS.gene027331:intron | 40.0% | |
| TGGTATGCCTAGTAGTTCAT+TGG | + | chr7.4:49830728-49830747 | MS.gene027331:intron | 40.0% | |
| TGTCAGCTATTCTCAGCAAA+GGG | - | chr7.4:49826963-49826982 | None:intergenic | 40.0% | |
| TTATGCTAAGGTTTCGCAAG+GGG | + | chr7.4:49826344-49826363 | MS.gene027331:CDS | 40.0% | |
| ! | ACATTCCCATTTTACACCTC+TGG | - | chr7.4:49830444-49830463 | None:intergenic | 40.0% |
| ! | ATTGTCTTGATGTTCTGAGC+AGG | - | chr7.4:49827852-49827871 | None:intergenic | 40.0% |
| ! | CAATTTGCGGTAGCTTTTGA+AGG | + | chr7.4:49828360-49828379 | MS.gene027331:CDS | 40.0% |
| ! | GATCTGGATTTTCTAAGCGT+TGG | - | chr7.4:49825999-49826018 | None:intergenic | 40.0% |
| ! | GCATATGATCTTTAAGGGGA+CGG | + | chr7.4:49826233-49826252 | MS.gene027331:CDS | 40.0% |
| ! | GTGTACTTCCATAGTGCTTT+TGG | - | chr7.4:49827029-49827048 | None:intergenic | 40.0% |
| ! | TACAAGGACACAGGTCTTTT+TGG | + | chr7.4:49828640-49828659 | MS.gene027331:CDS | 40.0% |
| ! | TGAAGTTGCAGAAAGCATGA+TGG | + | chr7.4:49828603-49828622 | MS.gene027331:CDS | 40.0% |
| ! | TTGTTGTGAGTGGTTTGGAT+TGG | + | chr7.4:49826560-49826579 | MS.gene027331:intron | 40.0% |
| ! | TTTACTTTGTTGATTGGGGG+AGG | - | chr7.4:49828502-49828521 | None:intergenic | 40.0% |
| !! | AGCAAAGGGTTAGTTTGGAT+TGG | - | chr7.4:49826949-49826968 | None:intergenic | 40.0% |
| !! | CATGTTTGTTGTGAGTGGTT+TGG | + | chr7.4:49826555-49826574 | MS.gene027331:intron | 40.0% |
| !! | GCGTTGGAGTTTTTGTTTGA+CGG | - | chr7.4:49825983-49826002 | None:intergenic | 40.0% |
| !! | GTGCAGATTTTAAGAACTGC+CGG | + | chr7.4:49827184-49827203 | MS.gene027331:intron | 40.0% |
| !! | GTTGTAGTATTGGCAGTTAG+GGG | + | chr7.4:49827299-49827318 | MS.gene027331:intron | 40.0% |
| !! | TAATTTGTTGTGCTCTCAGC+CGG | + | chr7.4:49829549-49829568 | MS.gene027331:intron | 40.0% |
| !! | TGCAGATTTTAAGAACTGCC+GGG | + | chr7.4:49827185-49827204 | MS.gene027331:intron | 40.0% |
| !! | TTCTCACTCCAAAAGCACTA+TGG | + | chr7.4:49827018-49827037 | MS.gene027331:intron | 40.0% |
| !! | TTCTCAGCAAAGGGTTAGTT+TGG | - | chr7.4:49826954-49826973 | None:intergenic | 40.0% |
| !!! | CATCGACTCGTTTTGTAAAC+AGG | + | chr7.4:49828305-49828324 | MS.gene027331:intron | 40.0% |
| !!! | CTGTTTGGATTGGCCTATTT+TGG | + | chr7.4:49826805-49826824 | MS.gene027331:intron | 40.0% |
| !!! | TAATGGAACGGCGCATTTTT+TGG | + | chr7.4:49826209-49826228 | MS.gene027331:CDS | 40.0% |
| !!! | TAGCTTTTGAAGGAGCATCT+TGG | + | chr7.4:49828370-49828389 | MS.gene027331:CDS | 40.0% |
| AACCTACTGGAACCGCTATT+AGG | + | chr7.4:49831496-49831515 | MS.gene027331:CDS | 45.0% | |
| ACATTACACTGCTCCTAGGA+TGG | + | chr7.4:49827905-49827924 | MS.gene027331:CDS | 45.0% | |
| AGACACATTACACTGCTCCT+AGG | + | chr7.4:49827901-49827920 | MS.gene027331:CDS | 45.0% | |
| AGAGTTGTGATGCGAGTTTC+AGG | - | chr7.4:49826087-49826106 | None:intergenic | 45.0% | |
| AGCCCTGTAGCTGAAGATAT+TGG | + | chr7.4:49830954-49830973 | MS.gene027331:CDS | 45.0% | |
| AGCTGAAGATATTGGTCGTC+AGG | + | chr7.4:49830962-49830981 | MS.gene027331:CDS | 45.0% | |
| ATCGGTGGGTCAGTTGTTAA+TGG | - | chr7.4:49827345-49827364 | None:intergenic | 45.0% | |
| ATGGCTCAGTCTGTTCATCA+TGG | - | chr7.4:49829971-49829990 | None:intergenic | 45.0% | |
| ATGGTCATGCAAGCAATGCT+GGG | + | chr7.4:49828417-49828436 | MS.gene027331:CDS | 45.0% | |
| CGACCAATATCTTCAGCTAC+AGG | - | chr7.4:49830960-49830979 | None:intergenic | 45.0% | |
| CGTCTGAACCAGTTGTAATC+AGG | - | chr7.4:49831473-49831492 | None:intergenic | 45.0% | |
| CTGTCAGCTATTCTCAGCAA+AGG | - | chr7.4:49826964-49826983 | None:intergenic | 45.0% | |
| CTTGGAATAAGACAGCAGGA+GGG | + | chr7.4:49828442-49828461 | MS.gene027331:CDS | 45.0% | |
| CTTTGCTGAGAATAGCTGAC+AGG | + | chr7.4:49826962-49826981 | MS.gene027331:intron | 45.0% | |
| GAACCGAATTTGAGGAAACG+TGG | - | chr7.4:49826021-49826040 | None:intergenic | 45.0% | |
| GACAAATCATCCAAGCAGTC+CGG | - | chr7.4:49829571-49829590 | None:intergenic | 45.0% | |
| GAGGAGATTGAGAATATGGG+TGG | + | chr7.4:49826282-49826301 | MS.gene027331:CDS | 45.0% | |
| GCAAACTCAAGAGGAAGACA+TGG | + | chr7.4:49828762-49828781 | MS.gene027331:intron | 45.0% | |
| GCCAAAATATCCAACGCAAC+AGG | - | chr7.4:49826375-49826394 | None:intergenic | 45.0% | |
| GGTTCTTGGAATAAGACAGC+AGG | + | chr7.4:49828438-49828457 | MS.gene027331:CDS | 45.0% | |
| TAAACGCTGAATAGGTCCCA+TGG | - | chr7.4:49831450-49831469 | None:intergenic | 45.0% | |
| TCGCTTCTGCTTCACATTGA+TGG | + | chr7.4:49830927-49830946 | MS.gene027331:CDS | 45.0% | |
| TCGGTGGGTCAGTTGTTAAT+GGG | - | chr7.4:49827344-49827363 | None:intergenic | 45.0% | |
| TCTTGGAATAAGACAGCAGG+AGG | + | chr7.4:49828441-49828460 | MS.gene027331:CDS | 45.0% | |
| TCTTTCTTCGCAATATGCGG+TGG | + | chr7.4:49829270-49829289 | MS.gene027331:intron | 45.0% | |
| TGGCTCAGTCTGTTCATCAT+GGG | - | chr7.4:49829970-49829989 | None:intergenic | 45.0% | |
| TGGTGTTTATGCTGTCGCTA+AGG | + | chr7.4:49828660-49828679 | MS.gene027331:CDS | 45.0% | |
| TTCAACCAACTGAGTTGCTG+TGG | - | chr7.4:49828184-49828203 | None:intergenic | 45.0% | |
| TTCAAGGTGATAGCTGCATC+TGG | + | chr7.4:49828090-49828109 | MS.gene027331:intron | 45.0% | |
| TTGGAATAAGACAGCAGGAG+GGG | + | chr7.4:49828443-49828462 | MS.gene027331:CDS | 45.0% | |
| ! | GACAACCAAGTTGGCTTATC+AGG | + | chr7.4:49829609-49829628 | MS.gene027331:CDS | 45.0% |
| ! | GATGTTGCTATTGCTGCCAT+GGG | + | chr7.4:49831431-49831450 | MS.gene027331:CDS | 45.0% |
| ! | GCCTGTTGCGTTGGATATTT+TGG | + | chr7.4:49826371-49826390 | MS.gene027331:CDS | 45.0% |
| ! | GGATTTTGGGCTGTTTGGAT+TGG | + | chr7.4:49826795-49826814 | MS.gene027331:intron | 45.0% |
| ! | GTTGGCTTATCAGGTTTCAG+AGG | + | chr7.4:49829618-49829637 | MS.gene027331:CDS | 45.0% |
| ! | TTGTGGGATTTTGGGCTGTT+TGG | + | chr7.4:49826790-49826809 | MS.gene027331:intron | 45.0% |
| !! | AGAATCGGATTAGTCGCGAA+AGG | + | chr7.4:49826424-49826443 | MS.gene027331:CDS | 45.0% |
| !! | CTGATGTCTGTTTGCTGTGT+GGG | + | chr7.4:49828060-49828079 | MS.gene027331:intron | 45.0% |
| !! | GAATCGGATTAGTCGCGAAA+GGG | + | chr7.4:49826425-49826444 | MS.gene027331:CDS | 45.0% |
| !! | GGTGGGATTTGTTGACAACT+TGG | - | chr7.4:49828163-49828182 | None:intergenic | 45.0% |
| !!! | TAAATTTTTATTTTTTTGTA+AGG | + | chr7.4:49827141-49827160 | MS.gene027331:intron | 5.0% |
| !!! | TTTCTTTTAATATATAAATA+TGG | + | chr7.4:49828029-49828048 | MS.gene027331:intron | 5.0% |
| AACCAACTGAGTTGCTGTGG+TGG | - | chr7.4:49828181-49828200 | None:intergenic | 50.0% | |
| ACCAACTGAGTTGCTGTGGT+GGG | - | chr7.4:49828180-49828199 | None:intergenic | 50.0% | |
| AGAGGATTCGTGTGTGGTCA+CGG | - | chr7.4:49826059-49826078 | None:intergenic | 50.0% | |
| AGCAGGAGGGGGAAAACATA+TGG | + | chr7.4:49828455-49828474 | MS.gene027331:CDS | 50.0% | |
| AGCTCGCATGCAAACTCAAG+AGG | + | chr7.4:49828753-49828772 | MS.gene027331:intron | 50.0% | |
| CAGGAGGGGGAAAACATATG+GGG | + | chr7.4:49828457-49828476 | MS.gene027331:CDS | 50.0% | |
| CCACACAGCAAACAGACATC+AGG | - | chr7.4:49828062-49828081 | None:intergenic | 50.0% | |
| CGCATCACAACTCTCCCTAA+CGG | + | chr7.4:49826093-49826112 | MS.gene027331:CDS | 50.0% | |
| CGGTGGGTCAGTTGTTAATG+GGG | - | chr7.4:49827343-49827362 | None:intergenic | 50.0% | |
| GAATGCGAGGGATTTGGAAG+AGG | + | chr7.4:49826263-49826282 | MS.gene027331:CDS | 50.0% | |
| GATCACGTTTGTGACATGGC+TGG | + | chr7.4:49830323-49830342 | MS.gene027331:intron | 50.0% | |
| GATGGTCATGCAAGCAATGC+TGG | + | chr7.4:49828416-49828435 | MS.gene027331:CDS | 50.0% | |
| GCAGGAGGGGGAAAACATAT+GGG | + | chr7.4:49828456-49828475 | MS.gene027331:CDS | 50.0% | |
| GCTACCGCAAATTGTGCAAG+AGG | - | chr7.4:49828354-49828373 | None:intergenic | 50.0% | |
| GGTGGGTCAGTTGTTAATGG+GGG | - | chr7.4:49827342-49827361 | None:intergenic | 50.0% | |
| GTAGAGTTGCTCTCACAGGT+CGG | + | chr7.4:49827211-49827230 | MS.gene027331:intron | 50.0% | |
| GTCAGTAGAGTTGCTCTCAC+AGG | + | chr7.4:49827207-49827226 | MS.gene027331:intron | 50.0% | |
| GTGGGTCAGTTGTTAATGGG+GGG | - | chr7.4:49827341-49827360 | None:intergenic | 50.0% | |
| TCGTGTGTGGTCACGGATTT+CGG | - | chr7.4:49826052-49826071 | None:intergenic | 50.0% | |
| TGAGAGCAACTCTACTGACC+CGG | - | chr7.4:49827206-49827225 | None:intergenic | 50.0% | |
| TGCAAGCAATGCTGGGTTCT+TGG | + | chr7.4:49828424-49828443 | MS.gene027331:CDS | 50.0% | |
| TGGAATAAGACAGCAGGAGG+GGG | + | chr7.4:49828444-49828463 | MS.gene027331:CDS | 50.0% | |
| TGGGTCAGTTGTTAATGGGG+GGG | - | chr7.4:49827340-49827359 | None:intergenic | 50.0% | |
| TGTGATGCGAGTTTCAGGAG+CGG | - | chr7.4:49826082-49826101 | None:intergenic | 50.0% | |
| TTCGAGACGGAGGAGAGTAA+TGG | + | chr7.4:49826192-49826211 | MS.gene027331:CDS | 50.0% | |
| ! | GACGGAGGAGAGTAATGGAA+CGG | + | chr7.4:49826197-49826216 | MS.gene027331:CDS | 50.0% |
| ! | GGATGTTGCTATTGCTGCCA+TGG | + | chr7.4:49831430-49831449 | MS.gene027331:intron | 50.0% |
| ! | GTTCTGAGCAGGTCCCAAAA+TGG | - | chr7.4:49827841-49827860 | None:intergenic | 50.0% |
| ! | TCCCAAAATGGTTCTGCCCA+GGG | - | chr7.4:49827829-49827848 | None:intergenic | 50.0% |
| ! | TGATCTTTAAGGGGACGGAG+AGG | + | chr7.4:49826238-49826257 | MS.gene027331:CDS | 50.0% |
| !! | CCTGATGTCTGTTTGCTGTG+TGG | + | chr7.4:49828059-49828078 | MS.gene027331:intron | 50.0% |
| !! | CTGTGTGGGTCTGCTTTTCA+AGG | + | chr7.4:49828074-49828093 | MS.gene027331:intron | 50.0% |
| !! | TGGTCACGGATTTCGGGTTT+AGG | - | chr7.4:49826045-49826064 | None:intergenic | 50.0% |
| ACTGGAAAGCGGTTGCGTGT+AGG | - | chr7.4:49827800-49827819 | None:intergenic | 55.0% | |
| AGCTCAAGGACTGCTACCGT+TGG | + | chr7.4:49826144-49826163 | MS.gene027331:CDS | 55.0% | |
| CGGTAGCAGTCCTTGAGCTA+AGG | - | chr7.4:49826143-49826162 | None:intergenic | 55.0% | |
| CGTGTGTGGTCACGGATTTC+GGG | - | chr7.4:49826051-49826070 | None:intergenic | 55.0% | |
| CGTTGGGGTTTGGATCGATG+CGG | + | chr7.4:49826161-49826180 | MS.gene027331:CDS | 55.0% | |
| CTCAAGGACTGCTACCGTTG+GGG | + | chr7.4:49826146-49826165 | MS.gene027331:CDS | 55.0% | |
| GAGGAGGAATGCGAGGGATT+TGG | + | chr7.4:49826257-49826276 | MS.gene027331:CDS | 55.0% | |
| GCTCAAGGACTGCTACCGTT+GGG | + | chr7.4:49826145-49826164 | MS.gene027331:CDS | 55.0% | |
| GCTTTCCAGTACACTCCCCT+GGG | + | chr7.4:49827810-49827829 | MS.gene027331:CDS | 55.0% | |
| GGTTCAGACGCAGAACCTAC+TGG | + | chr7.4:49831483-49831502 | MS.gene027331:CDS | 55.0% | |
| GTCAGTTGTTAATGGGGGGG+TGG | - | chr7.4:49827337-49827356 | None:intergenic | 55.0% | |
| GTTGGGGTTTGGATCGATGC+GGG | + | chr7.4:49826162-49826181 | MS.gene027331:CDS | 55.0% | |
| TCCCACCACAGCAACTCAGT+TGG | + | chr7.4:49828176-49828195 | MS.gene027331:CDS | 55.0% | |
| TCTGAGCTAGCACAGCGAGT+TGG | + | chr7.4:49828574-49828593 | MS.gene027331:CDS | 55.0% | |
| TGAGCTAAGGCTAGACTCCG+TGG | - | chr7.4:49826130-49826149 | None:intergenic | 55.0% | |
| TGCGGGTTCGAGATTCGAGA+CGG | + | chr7.4:49826179-49826198 | MS.gene027331:CDS | 55.0% | |
| TGTTACGCGTGCTCGCAATC+AGG | + | chr7.4:49829645-49829664 | MS.gene027331:CDS | 55.0% | |
| ! | CAGGGGAGTGTACTGGAAAG+CGG | - | chr7.4:49827811-49827830 | None:intergenic | 55.0% |
| ! | CCCAAAATGGTTCTGCCCAG+GGG | - | chr7.4:49827828-49827847 | None:intergenic | 55.0% |
| ! | CCCCTGGGCAGAACCATTTT+GGG | + | chr7.4:49827825-49827844 | MS.gene027331:CDS | 55.0% |
| ! | CGCATCGATCCAAACCCCAA+CGG | - | chr7.4:49826163-49826182 | None:intergenic | 55.0% |
| ! | GTAGGTTGAGGGCCAAACAG+AGG | + | chr7.4:49827758-49827777 | MS.gene027331:intron | 55.0% |
| ! | GTCCCAAAATGGTTCTGCCC+AGG | - | chr7.4:49827830-49827849 | None:intergenic | 55.0% |
| ! | TCCCCTGGGCAGAACCATTT+TGG | + | chr7.4:49827824-49827843 | MS.gene027331:CDS | 55.0% |
| ! | TCTTTAAGGGGACGGAGAGG+AGG | + | chr7.4:49826241-49826260 | MS.gene027331:CDS | 55.0% |
| !! | CGGAGTCTAGCCTTAGCTCA+AGG | + | chr7.4:49826130-49826149 | MS.gene027331:CDS | 55.0% |
| ACGCGTGCTCGCAATCAGGT+AGG | + | chr7.4:49829649-49829668 | MS.gene027331:intron | 60.0% | |
| AGGGGATGTGCCTGTTGCGT+TGG | + | chr7.4:49826362-49826381 | MS.gene027331:CDS | 60.0% | |
| CGCTTTCCAGTACACTCCCC+TGG | + | chr7.4:49827809-49827828 | MS.gene027331:CDS | 60.0% | |
| GACGGAGAGGAGGAATGCGA+GGG | + | chr7.4:49826251-49826270 | MS.gene027331:CDS | 60.0% | |
| GAGCGGAGAGGATTCGTGTG+TGG | - | chr7.4:49826065-49826084 | None:intergenic | 60.0% | |
| GGAAAGCGGTTGCGTGTAGG+TGG | - | chr7.4:49827797-49827816 | None:intergenic | 60.0% | |
| GGACTGCTACCGTTGGGGTT+TGG | + | chr7.4:49826151-49826170 | MS.gene027331:CDS | 60.0% | |
| GGGTTCGAGATTCGAGACGG+AGG | + | chr7.4:49826182-49826201 | MS.gene027331:CDS | 60.0% | |
| TGCGAGTTTCAGGAGCGGAG+AGG | - | chr7.4:49826077-49826096 | None:intergenic | 60.0% | |
| TGGCGACACGGAGTCCGTTA+GGG | - | chr7.4:49826110-49826129 | None:intergenic | 60.0% | |
| ! | TTCTGCCCAGGGGAGTGTAC+TGG | - | chr7.4:49827818-49827837 | None:intergenic | 60.0% |
| !! | TAACGGACTCCGTGTCGCCA+CGG | + | chr7.4:49826110-49826129 | MS.gene027331:CDS | 60.0% |
| GGACGGAGAGGAGGAATGCG+AGG | + | chr7.4:49826250-49826269 | MS.gene027331:CDS | 65.0% | |
| GGCTAGACTCCGTGGCGACA+CGG | - | chr7.4:49826122-49826141 | None:intergenic | 65.0% | |
| GTGCTCTCAGCCGGACTGCT+TGG | + | chr7.4:49829558-49829577 | MS.gene027331:intron | 65.0% | |
| GTGGCGACACGGAGTCCGTT+AGG | - | chr7.4:49826111-49826130 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 49825955 | 49831517 | 49825955 | ID=MS.gene027331 |
| chr7.4 | mRNA | 49825955 | 49831517 | 49825955 | ID=MS.gene027331.t1;Parent=MS.gene027331 |
| chr7.4 | exon | 49825955 | 49826473 | 49825955 | ID=MS.gene027331.t1.exon1;Parent=MS.gene027331.t1 |
| chr7.4 | CDS | 49825955 | 49826473 | 49825955 | ID=cds.MS.gene027331.t1;Parent=MS.gene027331.t1 |
| chr7.4 | exon | 49827762 | 49827926 | 49827762 | ID=MS.gene027331.t1.exon2;Parent=MS.gene027331.t1 |
| chr7.4 | CDS | 49827762 | 49827926 | 49827762 | ID=cds.MS.gene027331.t1;Parent=MS.gene027331.t1 |
| chr7.4 | exon | 49828096 | 49828233 | 49828096 | ID=MS.gene027331.t1.exon3;Parent=MS.gene027331.t1 |
| chr7.4 | CDS | 49828096 | 49828233 | 49828096 | ID=cds.MS.gene027331.t1;Parent=MS.gene027331.t1 |
| chr7.4 | exon | 49828327 | 49828478 | 49828327 | ID=MS.gene027331.t1.exon4;Parent=MS.gene027331.t1 |
| chr7.4 | CDS | 49828327 | 49828478 | 49828327 | ID=cds.MS.gene027331.t1;Parent=MS.gene027331.t1 |
| chr7.4 | exon | 49828573 | 49828681 | 49828573 | ID=MS.gene027331.t1.exon5;Parent=MS.gene027331.t1 |
| chr7.4 | CDS | 49828573 | 49828681 | 49828573 | ID=cds.MS.gene027331.t1;Parent=MS.gene027331.t1 |
| chr7.4 | exon | 49829568 | 49829666 | 49829568 | ID=MS.gene027331.t1.exon6;Parent=MS.gene027331.t1 |
| chr7.4 | CDS | 49829568 | 49829666 | 49829568 | ID=cds.MS.gene027331.t1;Parent=MS.gene027331.t1 |
| chr7.4 | exon | 49830918 | 49830983 | 49830918 | ID=MS.gene027331.t1.exon7;Parent=MS.gene027331.t1 |
| chr7.4 | CDS | 49830918 | 49830983 | 49830918 | ID=cds.MS.gene027331.t1;Parent=MS.gene027331.t1 |
| chr7.4 | exon | 49831236 | 49831343 | 49831236 | ID=MS.gene027331.t1.exon8;Parent=MS.gene027331.t1 |
| chr7.4 | CDS | 49831236 | 49831343 | 49831236 | ID=cds.MS.gene027331.t1;Parent=MS.gene027331.t1 |
| chr7.4 | exon | 49831431 | 49831517 | 49831431 | ID=MS.gene027331.t1.exon9;Parent=MS.gene027331.t1 |
| chr7.4 | CDS | 49831431 | 49831517 | 49831431 | ID=cds.MS.gene027331.t1;Parent=MS.gene027331.t1 |
| Gene Sequence |
| Protein sequence |
