Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20793.t1 | XP_003591424.1 | 88.8 | 1352 | 144 | 5 | 1 | 1350 | 1 | 1346 | 0.00E+00 | 2317 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20793.t1 | O04251 | 34.5 | 1354 | 635 | 39 | 9 | 1149 | 10 | 1324 | 1.7e-156 | 555.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20793.t1 | G7IDS4 | 88.8 | 1352 | 144 | 5 | 1 | 1350 | 1 | 1346 | 0.0e+00 | 2317.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene20793.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04985 | MS.gene20793 | 0.83997 | 1.15E-57 | -1.69E-46 |
| MS.gene049989 | MS.gene20793 | 0.820438 | 6.86E-53 | -1.69E-46 |
| MS.gene050297 | MS.gene20793 | 0.833767 | 4.41E-56 | -1.69E-46 |
| MS.gene050648 | MS.gene20793 | 0.818786 | 1.63E-52 | -1.69E-46 |
| MS.gene051629 | MS.gene20793 | 0.805638 | 1.21E-49 | -1.69E-46 |
| MS.gene059300 | MS.gene20793 | 0.83541 | 1.71E-56 | -1.69E-46 |
| MS.gene059778 | MS.gene20793 | 0.817113 | 3.90E-52 | -1.69E-46 |
| MS.gene06057 | MS.gene20793 | 0.803548 | 3.31E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20793.t1 | MTR_1g087290 | 92.160 | 1352 | 98 | 5 | 1 | 1350 | 1 | 1346 | 0.0 | 2516 |
| MS.gene20793.t1 | MTR_1g087290 | 92.794 | 1249 | 82 | 5 | 1 | 1247 | 1 | 1243 | 0.0 | 2330 |
| MS.gene20793.t1 | MTR_1g087290 | 81.132 | 106 | 18 | 1 | 1247 | 1350 | 1138 | 1243 | 1.54e-48 | 190 |
| MS.gene20793.t1 | MTR_6g016895 | 36.458 | 96 | 58 | 3 | 111 | 205 | 4 | 97 | 1.05e-13 | 75.9 |
| MS.gene20793.t1 | MTR_6g016895 | 36.458 | 96 | 58 | 3 | 111 | 205 | 4 | 97 | 1.27e-13 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20793.t1 | AT4G02110 | 70.870 | 230 | 66 | 1 | 920 | 1149 | 967 | 1195 | 5.83e-114 | 387 |
| MS.gene20793.t1 | AT4G02110 | 67.290 | 107 | 30 | 1 | 129 | 235 | 1 | 102 | 1.16e-37 | 155 |
| MS.gene20793.t1 | AT4G02110 | 70.870 | 230 | 66 | 1 | 920 | 1149 | 1096 | 1324 | 2.00e-112 | 385 |
| MS.gene20793.t1 | AT4G02110 | 63.436 | 227 | 78 | 1 | 9 | 235 | 10 | 231 | 5.15e-89 | 317 |
| MS.gene20793.t1 | AT1G67180 | 36.792 | 106 | 57 | 4 | 109 | 206 | 2 | 105 | 1.17e-13 | 75.1 |
| MS.gene20793.t1 | AT1G67180 | 36.792 | 106 | 57 | 4 | 109 | 206 | 2 | 105 | 5.27e-13 | 73.6 |
| MS.gene20793.t1 | AT1G67180 | 36.792 | 106 | 57 | 4 | 109 | 206 | 2 | 105 | 5.27e-13 | 73.6 |
Find 307 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAGAGTCTTTACCCTTAT+TGG | 0.075467 | 1.2:+65571033 | None:intergenic |
| GTTTGGGTGCTACTGCATTT+TGG | 0.133192 | 1.2:+65567770 | None:intergenic |
| GATTTCCTGGTCTTGATAAT+TGG | 0.143495 | 1.2:-65570013 | MS.gene20793:CDS |
| CTTTGCAGCTGTGGTCTTCT+TGG | 0.147073 | 1.2:+65569419 | None:intergenic |
| ACTTGTGGACCAGTAGAATT+TGG | 0.162831 | 1.2:+65571067 | None:intergenic |
| TCCATCTATATCAGAATTTA+AGG | 0.164801 | 1.2:-65569109 | MS.gene20793:CDS |
| AATTTCTCTGTCCTCCTTAT+AGG | 0.170617 | 1.2:+65568934 | None:intergenic |
| AAAATAAAACATGTGGTTTC+AGG | 0.179171 | 1.2:+65569075 | None:intergenic |
| AAATCGGAAAAGGCAGTATT+TGG | 0.201132 | 1.2:-65569387 | MS.gene20793:CDS |
| TATACTCGCTTTCTTGATAC+TGG | 0.214753 | 1.2:-65568205 | MS.gene20793:CDS |
| ATTTGTTAACATCAAGGATT+TGG | 0.217175 | 1.2:+65569769 | None:intergenic |
| AAAAGTCAATAAAAGTAAAA+AGG | 0.225243 | 1.2:-65567262 | MS.gene20793:CDS |
| ACAGGTCATGGTGCCTTCTA+TGG | 0.228805 | 1.2:-65568628 | MS.gene20793:CDS |
| AAAACCCAATAAAAGGAAAA+AGG | 0.231177 | 1.2:-65567732 | MS.gene20793:CDS |
| TCTTGTGTAACTTAACTTCT+TGG | 0.243171 | 1.2:+65570757 | None:intergenic |
| GCCTCATCTCTTGTCTCATT+TGG | 0.250185 | 1.2:+65569354 | None:intergenic |
| TCATTCTTTGAATTCTTTCC+TGG | 0.251009 | 1.2:+65570038 | None:intergenic |
| TTCAACAGCCGCCACTTTCT+TGG | 0.251038 | 1.2:+65568658 | None:intergenic |
| GGTGTTCATTTCGCTCTCTT+TGG | 0.264409 | 1.2:-65575451 | MS.gene20793:CDS |
| AGTCCCCTAGGTTCAAAATT+TGG | 0.268181 | 1.2:-65571148 | MS.gene20793:CDS |
| TAAAGATTTGGATGGAATTC+CGG | 0.270747 | 1.2:-65573254 | MS.gene20793:CDS |
| TCCAAAGGCACCTGGCTTCC+AGG | 0.273647 | 1.2:-65570849 | MS.gene20793:CDS |
| CAGACAGTGACATTTCTTTC+AGG | 0.274545 | 1.2:+65569319 | None:intergenic |
| TCCTTAGACTTGATATTTGC+TGG | 0.278398 | 1.2:+65569144 | None:intergenic |
| ATTCGATTCAAGCTTGTTAA+TGG | 0.292549 | 1.2:-65575306 | MS.gene20793:CDS |
| TTCTGCCTTACTTTGATGTT+TGG | 0.298597 | 1.2:+65567515 | None:intergenic |
| TGCTATTTCTTTGCTTCTGC+TGG | 0.302908 | 1.2:+65569824 | None:intergenic |
| GTACAGACCGCTTAAAGATT+TGG | 0.314245 | 1.2:-65573266 | MS.gene20793:CDS |
| CCTTGATGTTAACAAATTGA+TGG | 0.316106 | 1.2:-65569763 | MS.gene20793:CDS |
| TATTCTAGGAAGAACCAAAA+AGG | 0.316958 | 1.2:-65570674 | MS.gene20793:CDS |
| TTTGTTAACATCAAGGATTT+GGG | 0.318611 | 1.2:+65569770 | None:intergenic |
| GATTCCAAGCTGGGGCAATC+AGG | 0.318812 | 1.2:-65571190 | MS.gene20793:CDS |
| CCAGGATCGGGATGACATTA+TGG | 0.318910 | 1.2:-65573191 | MS.gene20793:intron |
| AAAGATTTGGATGGAATTCC+GGG | 0.320376 | 1.2:-65573253 | MS.gene20793:CDS |
| TTCCAGGATATTGACATTAC+TGG | 0.328872 | 1.2:-65570833 | MS.gene20793:CDS |
| AGCATGACATCTCCTCTTTC+CGG | 0.334297 | 1.2:+65567896 | None:intergenic |
| TCTGTCCTCCTTATAGGATC+TGG | 0.341349 | 1.2:+65568940 | None:intergenic |
| TAATCTGCGTGATGACAATT+TGG | 0.341472 | 1.2:-65570783 | MS.gene20793:CDS |
| GTATCAAGAAAGCGAGTATA+AGG | 0.343349 | 1.2:+65568208 | None:intergenic |
| AAACCATGCTCTTCATCATT+TGG | 0.346087 | 1.2:+65569216 | None:intergenic |
| TCTTTACCCTTATTGGCATT+TGG | 0.346613 | 1.2:+65571040 | None:intergenic |
| GAGGATTGCAGCAATCGATA+TGG | 0.347128 | 1.2:+65567352 | None:intergenic |
| GCCAGCAAATATCAAGTCTA+AGG | 0.349651 | 1.2:-65569145 | MS.gene20793:CDS |
| TCCTGGAAGCCAGGTGCCTT+TGG | 0.349876 | 1.2:+65570848 | None:intergenic |
| GCCTTAAATTCTGATATAGA+TGG | 0.350253 | 1.2:+65569108 | None:intergenic |
| TCATAGCTCCAGATCCTATA+AGG | 0.358776 | 1.2:-65568948 | MS.gene20793:CDS |
| TCTGCATGTGTTGAAGGTTC+TGG | 0.362025 | 1.2:-65570551 | MS.gene20793:CDS |
| GATTCTGCATTTCCTGAGAT+AGG | 0.362624 | 1.2:+65570224 | None:intergenic |
| CAGCTGTTCCTGAGGAGGAT+TGG | 0.366522 | 1.2:-65567799 | MS.gene20793:CDS |
| ATTTCCTGGTCTTGATAATT+GGG | 0.369870 | 1.2:-65570012 | MS.gene20793:CDS |
| CGAGGACGGTGCCATCAATA+TGG | 0.373926 | 1.2:-65568686 | MS.gene20793:CDS |
| TCAAAGAATGAAGGATTTCC+TGG | 0.374952 | 1.2:-65570026 | MS.gene20793:CDS |
| TCTTGGAGCCTCCATATTGA+TGG | 0.375100 | 1.2:+65568675 | None:intergenic |
| TGCAAAGAAGTTAGCGAAAT+CGG | 0.379072 | 1.2:-65569403 | MS.gene20793:CDS |
| TTGCGCGGTGACTTTCTAAT+CGG | 0.381507 | 1.2:+65569963 | None:intergenic |
| GTTGAGTACGTCTGCAAGCC+GGG | 0.382287 | 1.2:-65568082 | MS.gene20793:CDS |
| GATTTGGTTGTCTGCTTGAC+TGG | 0.387720 | 1.2:-65573223 | MS.gene20793:CDS |
| GCATGACATCTCCTCTTTCC+GGG | 0.388741 | 1.2:+65567897 | None:intergenic |
| CTAATATGCTACAAATTTGA+AGG | 0.393357 | 1.2:-65573008 | MS.gene20793:intron |
| TGTTAATTTCTTCAGCTTGA+AGG | 0.393387 | 1.2:-65571962 | MS.gene20793:intron |
| TCAGCTGCCAAGAGAACTTT+GGG | 0.395676 | 1.2:-65569936 | MS.gene20793:CDS |
| AATTCCGGGTGCAAAAGATT+TGG | 0.397200 | 1.2:-65573239 | MS.gene20793:CDS |
| AAATCGACACGTGGCATGCC+AGG | 0.401546 | 1.2:+65568160 | None:intergenic |
| CTGATTTGTGGTGATGAAAC+TGG | 0.403537 | 1.2:-65567399 | MS.gene20793:CDS |
| AATCGGAAAAGGCAGTATTT+GGG | 0.404273 | 1.2:-65569386 | MS.gene20793:CDS |
| ATCACCGTTGGCTGGAAGAT+TGG | 0.404581 | 1.2:-65572107 | MS.gene20793:intron |
| TTCTCATCAGTGGTCATATC+AGG | 0.407810 | 1.2:-65568980 | MS.gene20793:CDS |
| ATTTCTTCAGCTTGAAGGAT+TGG | 0.411153 | 1.2:-65571957 | MS.gene20793:intron |
| ATTTGCAAAACTTCAAAGTA+AGG | 0.412007 | 1.2:-65568005 | MS.gene20793:CDS |
| CTTAAGCGTGCGGTCAAAGC+TGG | 0.412816 | 1.2:-65568259 | MS.gene20793:CDS |
| TTTCTTCAGCTTGAAGGATT+GGG | 0.414914 | 1.2:-65571956 | MS.gene20793:intron |
| GAGATTTACCATTTGTTAGT+GGG | 0.417900 | 1.2:+65570393 | None:intergenic |
| CTTGTGGACCAGTAGAATTT+GGG | 0.418686 | 1.2:+65571068 | None:intergenic |
| GGGATGCGCATTGTTGTATA+TGG | 0.419008 | 1.2:-65568607 | MS.gene20793:CDS |
| TGAGATTTACCATTTGTTAG+TGG | 0.420188 | 1.2:+65570392 | None:intergenic |
| CTTTATTGTGGCCAATCTCT+TGG | 0.421271 | 1.2:+65572137 | None:intergenic |
| AGCAAAGAAATAGCAACTTC+TGG | 0.422190 | 1.2:-65569816 | MS.gene20793:CDS |
| TCTACTTCACATTTGTCATC+TGG | 0.424117 | 1.2:+65569666 | None:intergenic |
| CACTCTTCGCGAGTCTTTCG+CGG | 0.424802 | 1.2:-65575472 | MS.gene20793:CDS |
| AACAATGCGCATCCCATAGA+AGG | 0.432187 | 1.2:+65568615 | None:intergenic |
| TGGCATGCCAGGGCTAACTA+TGG | 0.435261 | 1.2:+65568171 | None:intergenic |
| AATGGCTCCGGATGAAGAAT+TGG | 0.436222 | 1.2:-65569637 | MS.gene20793:CDS |
| ACTGGAAATACAAATTCATC+TGG | 0.437293 | 1.2:-65570815 | MS.gene20793:CDS |
| TTCAAGCTTGTTAATGGCGG+TGG | 0.438677 | 1.2:-65575300 | MS.gene20793:CDS |
| GTCAGCTGCCAAGAGAACTT+TGG | 0.438819 | 1.2:-65569937 | MS.gene20793:CDS |
| TAGAAAACTGTGCACCCATC+AGG | 0.438898 | 1.2:+65573060 | None:intergenic |
| TTTCTTTCTGTTGACAAAGA+TGG | 0.441291 | 1.2:-65570320 | MS.gene20793:CDS |
| TTTGAGGAGAGAAGAAATGT+TGG | 0.441816 | 1.2:-65569195 | MS.gene20793:CDS |
| TCAGACAATGGTTGGCCTGA+TGG | 0.442786 | 1.2:-65573075 | MS.gene20793:intron |
| CCCTTCCACCAAGGTAGAAA+AGG | 0.443209 | 1.2:-65570591 | MS.gene20793:CDS |
| CCATCAATTTGTTAACATCA+AGG | 0.444383 | 1.2:+65569763 | None:intergenic |
| TGCCACTCATAAGGCTCCTC+TGG | 0.446343 | 1.2:+65568724 | None:intergenic |
| CAGCTATTCCCGAGGAGGAT+TGG | 0.447918 | 1.2:-65567323 | MS.gene20793:CDS |
| TTCCCTCTTCAGACAATGGT+TGG | 0.449094 | 1.2:-65573083 | MS.gene20793:intron |
| ATCAGCATTCTTAGACTCAA+TGG | 0.450480 | 1.2:+65570874 | None:intergenic |
| ACTGTACGGCACTCATGCTT+TGG | 0.452603 | 1.2:-65568038 | MS.gene20793:CDS |
| ATACTCGCTTTCTTGATACT+GGG | 0.453049 | 1.2:-65568204 | MS.gene20793:CDS |
| GACAAATGTGAAGTAGAGTT+GGG | 0.453783 | 1.2:-65569660 | MS.gene20793:CDS |
| TTGAGGAGAGAAGAAATGTT+GGG | 0.457765 | 1.2:-65569194 | MS.gene20793:CDS |
| GCATGCCACGTGTCGATTTG+TGG | 0.463323 | 1.2:-65568156 | MS.gene20793:CDS |
| TCTTCTGCATACTCACTAAC+CGG | 0.463631 | 1.2:+65569732 | None:intergenic |
| CGCTAACTTCTTTGCAGCTG+TGG | 0.465086 | 1.2:+65569410 | None:intergenic |
| TCGGTGCTACGAGTTATTCT+AGG | 0.468156 | 1.2:-65570688 | MS.gene20793:CDS |
| GCATTTGATAAGCCTATCTC+AGG | 0.468199 | 1.2:-65570236 | MS.gene20793:CDS |
| CAGACAATGGTTGGCCTGAT+GGG | 0.468396 | 1.2:-65573074 | MS.gene20793:CDS |
| ATCAAATCTGCATGTGTTGA+AGG | 0.468581 | 1.2:-65570557 | MS.gene20793:CDS |
| ATTCCAAGCTGGGGCAATCA+GGG | 0.469861 | 1.2:-65571189 | MS.gene20793:CDS |
| TTGTGTTGTAGCGGACTACT+TGG | 0.476668 | 1.2:-65568104 | MS.gene20793:CDS |
| CGATCATCTCACAGAAAACA+AGG | 0.477136 | 1.2:-65575425 | MS.gene20793:intron |
| CCATAATGTCATCCCGATCC+TGG | 0.479361 | 1.2:+65573191 | None:intergenic |
| TTTCCGGGGATCCACATACT+TGG | 0.479829 | 1.2:+65567912 | None:intergenic |
| CATGCCACGTGTCGATTTGT+GGG | 0.481317 | 1.2:-65568155 | MS.gene20793:CDS |
| AGCTACATGAATCATATGTT+AGG | 0.482525 | 1.2:-65570898 | MS.gene20793:CDS |
| CTGCATGTGTTGAAGGTTCT+GGG | 0.482604 | 1.2:-65570550 | MS.gene20793:CDS |
| TGACAAATGTGAAGTAGAGT+TGG | 0.483171 | 1.2:-65569661 | MS.gene20793:CDS |
| GGGCAAAACCAATCCTCCTC+GGG | 0.485220 | 1.2:+65567315 | None:intergenic |
| TTGATCTACTACCCTGGAAA+AGG | 0.486609 | 1.2:+65570646 | None:intergenic |
| GATGTTGGTGACTGCATTGT+GGG | 0.486729 | 1.2:-65575092 | MS.gene20793:CDS |
| TTCCAGTAATGTCAATATCC+TGG | 0.487192 | 1.2:+65570831 | None:intergenic |
| TGGCTATCTACGCCAGGATC+GGG | 0.488311 | 1.2:-65573203 | MS.gene20793:CDS |
| GAACCTGACAGCTTACCTTC+AGG | 0.489934 | 1.2:+65570951 | None:intergenic |
| ACTAGAGATGATGGCGGAAG+AGG | 0.490099 | 1.2:-65571239 | MS.gene20793:CDS |
| GGGACAGACTCACTTTGCCT+TGG | 0.490392 | 1.2:+65567694 | None:intergenic |
| GCTAGTTAATCACCGTTGGC+TGG | 0.491106 | 1.2:-65572115 | MS.gene20793:CDS |
| AGATGAACCAATTCTTCATC+CGG | 0.491955 | 1.2:+65569630 | None:intergenic |
| TTTCCCGCGATCCACATACT+TGG | 0.492525 | 1.2:+65567436 | None:intergenic |
| GTACGAGCTTGCCAAGAGAT+TGG | 0.493559 | 1.2:-65572148 | MS.gene20793:CDS |
| TCTAGAACCCAAAGTTCTCT+TGG | 0.493789 | 1.2:+65569929 | None:intergenic |
| AAATAACTTAAATACCTGCT+TGG | 0.501492 | 1.2:-65570294 | MS.gene20793:CDS |
| GGTTGAGTACGTCTGCAAGC+CGG | 0.501698 | 1.2:-65568083 | MS.gene20793:CDS |
| CAACCTGAAGGTAAGCTGTC+AGG | 0.502452 | 1.2:-65570954 | MS.gene20793:CDS |
| TTTCTTAAGTGCCAGTAGCC+AGG | 0.503878 | 1.2:-65568761 | MS.gene20793:CDS |
| AATGGCGGTGGAGTTGATGC+GGG | 0.504030 | 1.2:-65575288 | MS.gene20793:CDS |
| GAAGGTTCTGGGAAAGAAAC+TGG | 0.504396 | 1.2:-65570539 | MS.gene20793:CDS |
| CAAACCGAGGTAGCATCAAC+AGG | 0.505536 | 1.2:+65575043 | None:intergenic |
| TGGCCATCGCCTACAGAGAA+AGG | 0.506713 | 1.2:-65569049 | MS.gene20793:CDS |
| GCACTCATGCTTTGGCAGAT+AGG | 0.508633 | 1.2:-65568030 | MS.gene20793:CDS |
| GAGGCGGAAGATTCCAAGCT+GGG | 0.509729 | 1.2:-65571199 | MS.gene20793:CDS |
| ATTTACCAAACATCAAAGTA+AGG | 0.510575 | 1.2:-65567520 | MS.gene20793:CDS |
| GGGCAAAACCAATCCTCCTC+AGG | 0.510620 | 1.2:+65567791 | None:intergenic |
| AAAACTACTCAGCGAGATGA+AGG | 0.510675 | 1.2:-65569858 | MS.gene20793:CDS |
| GATGAGCCACCTGTGTCTGA+TGG | 0.510751 | 1.2:-65570344 | MS.gene20793:CDS |
| CAGGTCATGGTGCCTTCTAT+GGG | 0.513908 | 1.2:-65568627 | MS.gene20793:CDS |
| TGATCAAGCGTTTGAAAGGA+AGG | 0.513959 | 1.2:-65569014 | MS.gene20793:CDS |
| GTTCTTATCACAGGACGATC+CGG | 0.515315 | 1.2:-65575143 | MS.gene20793:intron |
| ATAATTCATTGCCTCAAAAG+AGG | 0.515513 | 1.2:-65570493 | MS.gene20793:CDS |
| GGAGATTTGATGCTGATTTG+TGG | 0.515683 | 1.2:-65567411 | MS.gene20793:CDS |
| GAAGTTAGCGAAATCGGAAA+AGG | 0.517733 | 1.2:-65569397 | MS.gene20793:CDS |
| GTTGATGCGGGGAAGAACAC+TGG | 0.518035 | 1.2:-65575276 | MS.gene20793:CDS |
| TTAATCAAGTCTAAAGATAG+TGG | 0.518083 | 1.2:-65570149 | MS.gene20793:CDS |
| GGCAGAAGAGATTATTGAGG+AGG | 0.521403 | 1.2:-65567984 | MS.gene20793:CDS |
| AGGATTGCAGCAATCGATAT+GGG | 0.522430 | 1.2:+65567353 | None:intergenic |
| GGAAAGAATTCAAAGAATGA+AGG | 0.523294 | 1.2:-65570035 | MS.gene20793:CDS |
| TCAACTTCTACAAGTGCTGA+TGG | 0.523391 | 1.2:-65570734 | MS.gene20793:CDS |
| GATGATGGCGGAAGAGGCTA+AGG | 0.523468 | 1.2:-65571233 | MS.gene20793:CDS |
| CTGGCTATCTACGCCAGGAT+CGG | 0.524351 | 1.2:-65573204 | MS.gene20793:CDS |
| TTTGGCACAGCTGTGACTCA+TGG | 0.524555 | 1.2:-65571130 | MS.gene20793:CDS |
| CGTGCGGTCAAAGCTGGAGA+TGG | 0.526398 | 1.2:-65568253 | MS.gene20793:CDS |
| ATCAAATGCCAATGTGTTGG+AGG | 0.526782 | 1.2:+65570250 | None:intergenic |
| GTGATTAACTAGCTTTATTG+TGG | 0.528417 | 1.2:+65572125 | None:intergenic |
| TTAAGTGCCAGTAGCCAGGC+AGG | 0.529869 | 1.2:-65568757 | MS.gene20793:CDS |
| GGCTAAGGATTCTGAGGATG+AGG | 0.530245 | 1.2:-65571218 | MS.gene20793:CDS |
| AATGAGACAAGAGATGAGGC+AGG | 0.530559 | 1.2:-65569351 | MS.gene20793:CDS |
| AAAGCCATCCCAAATTCTAC+TGG | 0.533698 | 1.2:-65571076 | MS.gene20793:CDS |
| AGATTTACCATTTGTTAGTG+GGG | 0.534103 | 1.2:+65570394 | None:intergenic |
| CGTACAGTACGTGTCTCTCA+AGG | 0.534451 | 1.2:+65568053 | None:intergenic |
| GTATGTGGATCGCGGGAAAG+AGG | 0.535687 | 1.2:-65567432 | MS.gene20793:CDS |
| AAAGACTCTTCGATTACTAC+AGG | 0.536651 | 1.2:-65571022 | MS.gene20793:CDS |
| GTAGAATGCAAAGAAACGTC+AGG | 0.538051 | 1.2:+65570929 | None:intergenic |
| CTTGACTGGCTATCTACGCC+AGG | 0.538587 | 1.2:-65573209 | MS.gene20793:CDS |
| GGTTCCATTGGCTGTGGAGT+GGG | 0.539135 | 1.2:-65567378 | MS.gene20793:CDS |
| TCCGCTGGCAGCTGTTCCTG+AGG | 0.539542 | 1.2:-65567807 | MS.gene20793:CDS |
| GGTGATGAAACTGGTTCCAT+TGG | 0.539624 | 1.2:-65567390 | MS.gene20793:CDS |
| TGGGCAAAACCAATCCTCCT+CGG | 0.539703 | 1.2:+65567314 | None:intergenic |
| GAAGTTAGAAGCAGTTGACC+AGG | 0.539770 | 1.2:-65569577 | MS.gene20793:CDS |
| CAGGTGATCAAGCGTTTGAA+AGG | 0.545429 | 1.2:-65569018 | MS.gene20793:CDS |
| AGTAGAGTTGGGAATGGCTC+CGG | 0.546272 | 1.2:-65569649 | MS.gene20793:CDS |
| TTCACATTGATCTACTACCC+TGG | 0.547336 | 1.2:+65570640 | None:intergenic |
| GAAAGTGGTTCCGTTGGCTG+TGG | 0.549655 | 1.2:-65567860 | MS.gene20793:CDS |
| TTCTAACTTCTCTTCTGCTG+AGG | 0.549668 | 1.2:+65569590 | None:intergenic |
| TAAGGCAGAAGAGATTATCA+AGG | 0.551599 | 1.2:-65567502 | MS.gene20793:CDS |
| TGTGTTGCTGCGAGAGAGGA+TGG | 0.552898 | 1.2:-65575118 | MS.gene20793:CDS |
| TAAGGCAGAAGAGATTATTG+AGG | 0.553441 | 1.2:-65567987 | MS.gene20793:CDS |
| ACAGAGAAAGGAGTTTCAGC+AGG | 0.553933 | 1.2:-65569037 | MS.gene20793:CDS |
| CTTATCAAATGCCAATGTGT+TGG | 0.554180 | 1.2:+65570247 | None:intergenic |
| TTGGGTTCTAGACCCAGAAA+AGG | 0.554581 | 1.2:-65569918 | MS.gene20793:CDS |
| GGAGATGTCATGCTGATTTG+TGG | 0.554732 | 1.2:-65567887 | MS.gene20793:CDS |
| CGACTGCTGCGATCCTCCGC+TGG | 0.556838 | 1.2:-65567822 | MS.gene20793:CDS |
| ATGTCAATATCCTGGAAGCC+AGG | 0.557352 | 1.2:+65570839 | None:intergenic |
| TAAGCCGTTGGTCGCAAACA+AGG | 0.557591 | 1.2:-65573039 | MS.gene20793:CDS |
| GTATGTGGATCCCCGGAAAG+AGG | 0.557935 | 1.2:-65567908 | MS.gene20793:CDS |
| GACTATGCCATAGTTAGCCC+TGG | 0.558059 | 1.2:-65568178 | MS.gene20793:CDS |
| AAATTGTCATCACGCAGATT+AGG | 0.560313 | 1.2:+65570785 | None:intergenic |
| GGTACCCACTCCACAGCCAA+TGG | 0.560665 | 1.2:+65567374 | None:intergenic |
| GGGTGCATTGTCTTCATCAA+AGG | 0.560961 | 1.2:-65567241 | MS.gene20793:CDS |
| TTGCCAAGTATGTGGATCGC+GGG | 0.563072 | 1.2:-65567439 | MS.gene20793:CDS |
| TCCTCAGGAACAGCTGCCAG+CGG | 0.564075 | 1.2:+65567806 | None:intergenic |
| GCTGAAACTCCTTTCTCTGT+AGG | 0.564808 | 1.2:+65569040 | None:intergenic |
| TAATGGCGGTGGAGTTGATG+CGG | 0.564836 | 1.2:-65575289 | MS.gene20793:CDS |
| AGAAACTGGTGTTATTCAAG+AGG | 0.565350 | 1.2:-65570525 | MS.gene20793:CDS |
| AGACCGCTTAAAGATTTGGA+TGG | 0.566779 | 1.2:-65573262 | MS.gene20793:CDS |
| GGTTCCGTTGGCTGTGGAGT+GGG | 0.567218 | 1.2:-65567854 | MS.gene20793:CDS |
| TTGCCAAGTATGTGGATCCC+CGG | 0.569403 | 1.2:-65567915 | MS.gene20793:CDS |
| GTAACCTTGTTTGCGACCAA+CGG | 0.570120 | 1.2:+65573035 | None:intergenic |
| CAAGGAGGTCATTCCTCATG+AGG | 0.570635 | 1.2:-65567484 | MS.gene20793:CDS |
| TCAGGAACAGCTGCCAGCGG+AGG | 0.571501 | 1.2:+65567809 | None:intergenic |
| TGAGGCGGAAGATTCCAAGC+TGG | 0.572135 | 1.2:-65571200 | MS.gene20793:CDS |
| GGGTGCATTGTCTTCATCCA+AGG | 0.576286 | 1.2:-65567711 | MS.gene20793:CDS |
| ACTATAAGCAAAAGTCCCCT+AGG | 0.576594 | 1.2:-65571160 | MS.gene20793:CDS |
| AATAGCAACTTCTGGTGTGA+AGG | 0.576721 | 1.2:-65569808 | MS.gene20793:CDS |
| CATCTTGAGTGTTCATCACC+AGG | 0.578167 | 1.2:-65570056 | MS.gene20793:CDS |
| GCCACTTAAAATAAAACATG+TGG | 0.579555 | 1.2:+65569068 | None:intergenic |
| CTGAAAACAAATATAACAAG+AGG | 0.579867 | 1.2:-65571924 | MS.gene20793:intron |
| CTGATTTGTGGTGATGAAAG+TGG | 0.580324 | 1.2:-65567875 | MS.gene20793:CDS |
| TAAAGCTAGTTAATCACCGT+TGG | 0.584487 | 1.2:-65572119 | MS.gene20793:CDS |
| GAAACTGGTTCCATTGGCTG+TGG | 0.584504 | 1.2:-65567384 | MS.gene20793:CDS |
| CTTGAGAGACACGTACTGTA+CGG | 0.584559 | 1.2:-65568052 | MS.gene20793:CDS |
| CGGCTGTTGAAAGAAAGAAC+AGG | 0.584901 | 1.2:-65568646 | MS.gene20793:CDS |
| AGTGAGTATGCAGAAGATGC+TGG | 0.586456 | 1.2:-65569726 | MS.gene20793:CDS |
| AATGCCTGTTGATGCTACCT+CGG | 0.587295 | 1.2:-65575047 | MS.gene20793:intron |
| TTACCTTCCTGATGCAGTAG+CGG | 0.587895 | 1.2:+65568906 | None:intergenic |
| CTAACAAATGGTAAATCTCA+AGG | 0.589314 | 1.2:-65570389 | MS.gene20793:CDS |
| GATATAGCTTGCCAAGTATG+TGG | 0.590227 | 1.2:-65567923 | MS.gene20793:CDS |
| TCCAAGCTGGGGCAATCAGG+GGG | 0.590436 | 1.2:-65571187 | MS.gene20793:CDS |
| GAGTTCTCACTTATATCAGA+AGG | 0.591107 | 1.2:+65569294 | None:intergenic |
| CGATTCAAGCTTGTTAATGG+CGG | 0.592256 | 1.2:-65575303 | MS.gene20793:CDS |
| ACTCCTTTCTCTGTAGGCGA+TGG | 0.592552 | 1.2:+65569046 | None:intergenic |
| GCTCAAGGGACAGACTCACT+TGG | 0.593309 | 1.2:+65567218 | None:intergenic |
| TTGAAAGAAAGAACAGGTCA+TGG | 0.594190 | 1.2:-65568640 | MS.gene20793:CDS |
| TACTCGCTTTCTTGATACTG+GGG | 0.595273 | 1.2:-65568203 | MS.gene20793:CDS |
| ATATGGAGGCTCCAAGAAAG+TGG | 0.595831 | 1.2:-65568669 | MS.gene20793:CDS |
| AGCTTCTGCCTCCAACACAT+TGG | 0.597432 | 1.2:-65570258 | MS.gene20793:CDS |
| GATGTAGCTTGCCAAGTATG+TGG | 0.597538 | 1.2:-65567447 | MS.gene20793:CDS |
| CATGACATCTCCTCTTTCCG+GGG | 0.598439 | 1.2:+65567898 | None:intergenic |
| GAGGTTGAGTCTAACTCTGA+AGG | 0.599018 | 1.2:+65569489 | None:intergenic |
| TTCCAAGCTGGGGCAATCAG+GGG | 0.599814 | 1.2:-65571188 | MS.gene20793:CDS |
| AGATGTTGGTGACTGCATTG+TGG | 0.600644 | 1.2:-65575093 | MS.gene20793:CDS |
| GCTGGCAGCTGTTCCTGAGG+AGG | 0.600700 | 1.2:-65567804 | MS.gene20793:CDS |
| GTCAAAATCTCTAAGAGAGG+AGG | 0.602945 | 1.2:-65571104 | MS.gene20793:CDS |
| TGGACCAGTAGAATTTGGGA+TGG | 0.603738 | 1.2:+65571072 | None:intergenic |
| TAGTGGTGAGCCTGATGCAA+CGG | 0.604279 | 1.2:-65570132 | MS.gene20793:CDS |
| TGGTTCCGTTGGCTGTGGAG+TGG | 0.604568 | 1.2:-65567855 | MS.gene20793:CDS |
| CAAGGTAGAAAAGGCAAGTG+AGG | 0.606134 | 1.2:-65570582 | MS.gene20793:CDS |
| GATCAAGCGTTTGAAAGGAA+GGG | 0.612539 | 1.2:-65569013 | MS.gene20793:CDS |
| TGCGGATTTAGAAACCAAGC+AGG | 0.612594 | 1.2:+65570280 | None:intergenic |
| GTTGAACATAGTGCTGATGT+TGG | 0.612914 | 1.2:-65575070 | MS.gene20793:CDS |
| AAATCCCAATTATCAAGACC+AGG | 0.613763 | 1.2:+65570008 | None:intergenic |
| TTGGCAGCTGACTTCTTGCG+CGG | 0.614710 | 1.2:+65569948 | None:intergenic |
| AGTACCCACTCCACAGCCAA+CGG | 0.616922 | 1.2:+65567850 | None:intergenic |
| TCATCGTCGCGATCCTCATG+AGG | 0.617058 | 1.2:+65567953 | None:intergenic |
| ATGTGAAGTAGAGTTGGGAA+TGG | 0.617643 | 1.2:-65569655 | MS.gene20793:CDS |
| AATCGACACGTGGCATGCCA+GGG | 0.619056 | 1.2:+65568161 | None:intergenic |
| TGTGTTGGAGGCAGAAGCTG+CGG | 0.620092 | 1.2:+65570262 | None:intergenic |
| TTGAGTACGTCTGCAAGCCG+GGG | 0.621599 | 1.2:-65568081 | MS.gene20793:CDS |
| GTACAGTACGTGTCTCTCAA+GGG | 0.622673 | 1.2:+65568054 | None:intergenic |
| GGTGGCTCATCAACCACAGA+TGG | 0.622968 | 1.2:+65570356 | None:intergenic |
| GGTGATGAAAGTGGTTCCGT+TGG | 0.623291 | 1.2:-65567866 | MS.gene20793:CDS |
| GGTGTGTGTTGCTGCGAGAG+AGG | 0.626024 | 1.2:-65575122 | MS.gene20793:CDS |
| TCATCATTGCAACCCTCATG+AGG | 0.626300 | 1.2:+65567471 | None:intergenic |
| AAGGAGGTCATTCCTCATGA+GGG | 0.627795 | 1.2:-65567483 | MS.gene20793:CDS |
| AGACCAAATGATGAAGAGCA+TGG | 0.627980 | 1.2:-65569219 | MS.gene20793:CDS |
| TGGTTCCATTGGCTGTGGAG+TGG | 0.628638 | 1.2:-65567379 | MS.gene20793:CDS |
| GCATAATATTAGCAACCTGA+AGG | 0.628689 | 1.2:-65570966 | MS.gene20793:CDS |
| AAGTAGTCCGCTACAACACA+AGG | 0.628899 | 1.2:+65568106 | None:intergenic |
| TCAAGAAAGCGAGTATAAGG+AGG | 0.629991 | 1.2:+65568211 | None:intergenic |
| TCCAAATGAGACAAGAGATG+AGG | 0.630653 | 1.2:-65569355 | MS.gene20793:CDS |
| TTGCCGCTACTGCATCAGGA+AGG | 0.631958 | 1.2:-65568909 | MS.gene20793:intron |
| ATACAAATTCATCTGGTCTG+TGG | 0.632592 | 1.2:-65570808 | MS.gene20793:CDS |
| ATCGGAAAAGGCAGTATTTG+GGG | 0.632673 | 1.2:-65569385 | MS.gene20793:CDS |
| TTGTTAACATCAAGGATTTG+GGG | 0.635516 | 1.2:+65569771 | None:intergenic |
| GCACATTCAGATGAAAAGCT+CGG | 0.636983 | 1.2:-65570707 | MS.gene20793:CDS |
| ATCGTCAAAATCTCTAAGAG+AGG | 0.640134 | 1.2:-65571107 | MS.gene20793:CDS |
| GGAAGAGGCTAAGGATTCTG+AGG | 0.640663 | 1.2:-65571224 | MS.gene20793:CDS |
| TCCTCGGGAATAGCTGTCAG+CGG | 0.641403 | 1.2:+65567330 | None:intergenic |
| TTTGCCGTGATTCTCATCAG+TGG | 0.642588 | 1.2:-65568990 | MS.gene20793:CDS |
| CTTGCCAAGTATGTGGATCG+CGG | 0.642622 | 1.2:-65567440 | MS.gene20793:CDS |
| GGCAGGAAAATTATTGCCAG+AGG | 0.644253 | 1.2:-65568740 | MS.gene20793:CDS |
| ATGAGACAAGAGATGAGGCA+GGG | 0.645233 | 1.2:-65569350 | MS.gene20793:CDS |
| TCGTCGCGATCCTCATGAGG+AGG | 0.645323 | 1.2:+65567956 | None:intergenic |
| GAAAGAAAGCCATCAGACAC+AGG | 0.645551 | 1.2:+65570335 | None:intergenic |
| ACAGGATACTCTTAAGCGTG+CGG | 0.647401 | 1.2:-65568269 | MS.gene20793:intron |
| ATTCCATCCAAATCTTTAAG+CGG | 0.647811 | 1.2:+65573259 | None:intergenic |
| GAGAGAGGATGGAAAGATGT+TGG | 0.648494 | 1.2:-65575107 | MS.gene20793:CDS |
| GGAGGTTATTCCTCCTCATG+AGG | 0.650168 | 1.2:-65567966 | MS.gene20793:CDS |
| TGAGATACCTTGTGTTGTAG+CGG | 0.650742 | 1.2:-65568113 | MS.gene20793:CDS |
| TAAGGATTCTGAGGATGAGG+CGG | 0.653839 | 1.2:-65571215 | MS.gene20793:CDS |
| TCTCTCGCAGCAACACACAC+CGG | 0.655994 | 1.2:+65575124 | None:intergenic |
| TCCGCTGACAGCTATTCCCG+AGG | 0.660558 | 1.2:-65567331 | MS.gene20793:CDS |
| GATCAATGTGAAGACAGAGA+AGG | 0.661317 | 1.2:-65570629 | MS.gene20793:CDS |
| GGCAGAAGAGATTATCAAGG+AGG | 0.663325 | 1.2:-65567499 | MS.gene20793:CDS |
| TCGGGAATAGCTGTCAGCGG+AGG | 0.663496 | 1.2:+65567333 | None:intergenic |
| ATGACCACTGATGAGAATCA+CGG | 0.663566 | 1.2:+65568986 | None:intergenic |
| GGACGGTGCCATCAATATGG+AGG | 0.665513 | 1.2:-65568683 | MS.gene20793:CDS |
| AGGCGGAAGATTCCAAGCTG+GGG | 0.675147 | 1.2:-65571198 | MS.gene20793:CDS |
| AGGATCGAAAGTGCCATCTG+TGG | 0.676967 | 1.2:-65570369 | MS.gene20793:CDS |
| ATGGCGGTGGAGTTGATGCG+GGG | 0.679578 | 1.2:-65575287 | MS.gene20793:CDS |
| TGGAGGCTCCAAGAAAGTGG+CGG | 0.683408 | 1.2:-65568666 | MS.gene20793:CDS |
| TGCCAGAGGAGCCTTATGAG+TGG | 0.683644 | 1.2:-65568726 | MS.gene20793:CDS |
| TAGCTCCAGATCCTATAAGG+AGG | 0.687705 | 1.2:-65568945 | MS.gene20793:CDS |
| CATACCAATCTTCCAGCCAA+CGG | 0.689524 | 1.2:+65572103 | None:intergenic |
| TCTTGAAACCCCTTCCACCA+AGG | 0.691814 | 1.2:-65570600 | MS.gene20793:CDS |
| AGAAAGCCATCAGACACAGG+TGG | 0.698252 | 1.2:+65570338 | None:intergenic |
| GCTGACAGCTATTCCCGAGG+AGG | 0.706393 | 1.2:-65567328 | MS.gene20793:CDS |
| TGGACCCACAAATCGACACG+TGG | 0.713655 | 1.2:+65568151 | None:intergenic |
| TGATGAACACTCAAGATGTG+TGG | 0.746588 | 1.2:+65570061 | None:intergenic |
| TGTCTCTCAAGGGAGAACCC+CGG | 0.757252 | 1.2:+65568064 | None:intergenic |
| GAGTATGCAGAAGATGCTGG+TGG | 0.768912 | 1.2:-65569723 | MS.gene20793:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 65567233 | 65575509 | 65567233 | ID=MS.gene20793 |
| chr1.2 | mRNA | 65567233 | 65575509 | 65567233 | ID=MS.gene20793.t1;Parent=MS.gene20793 |
| chr1.2 | exon | 65575426 | 65575509 | 65575426 | ID=MS.gene20793.t1.exon1;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65575426 | 65575509 | 65575426 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65575239 | 65575328 | 65575239 | ID=MS.gene20793.t1.exon2;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65575239 | 65575328 | 65575239 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65575048 | 65575152 | 65575048 | ID=MS.gene20793.t1.exon3;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65575048 | 65575152 | 65575048 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65573192 | 65573293 | 65573192 | ID=MS.gene20793.t1.exon4;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65573192 | 65573293 | 65573192 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65573009 | 65573093 | 65573009 | ID=MS.gene20793.t1.exon5;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65573009 | 65573093 | 65573009 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65572108 | 65572177 | 65572108 | ID=MS.gene20793.t1.exon6;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65572108 | 65572177 | 65572108 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65571925 | 65571969 | 65571925 | ID=MS.gene20793.t1.exon7;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65571925 | 65571969 | 65571925 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65568910 | 65571270 | 65568910 | ID=MS.gene20793.t1.exon8;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65568910 | 65571270 | 65568910 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65568585 | 65568801 | 65568585 | ID=MS.gene20793.t1.exon9;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65568585 | 65568801 | 65568585 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65567707 | 65568287 | 65567707 | ID=MS.gene20793.t1.exon10;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65567707 | 65568287 | 65567707 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| chr1.2 | exon | 65567233 | 65567545 | 65567233 | ID=MS.gene20793.t1.exon11;Parent=MS.gene20793.t1 |
| chr1.2 | CDS | 65567233 | 65567545 | 65567233 | ID=cds.MS.gene20793.t1;Parent=MS.gene20793.t1 |
| Gene Sequence |
| Protein sequence |
