Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20991.t1 | XP_003591234.1 | 99.7 | 333 | 1 | 0 | 1 | 333 | 1 | 333 | 4.80E-189 | 670.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20991.t1 | Q9LZ98 | 82.9 | 333 | 51 | 2 | 1 | 332 | 1 | 328 | 4.6e-156 | 552.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20991.t1 | G7IAA4 | 99.7 | 333 | 1 | 0 | 1 | 333 | 1 | 333 | 3.5e-189 | 670.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055505 | MS.gene20991 | 0.818724 | 1.69E-52 | -1.69E-46 |
| MS.gene056849 | MS.gene20991 | 0.825531 | 4.46E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20991.t1 | MTR_1g084720 | 99.700 | 333 | 1 | 0 | 1 | 333 | 1 | 333 | 0.0 | 678 |
| MS.gene20991.t1 | MTR_1g069750 | 55.431 | 267 | 111 | 5 | 6 | 270 | 10 | 270 | 6.37e-101 | 299 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20991.t1 | AT5G02270 | 83.483 | 333 | 49 | 3 | 1 | 332 | 1 | 328 | 0.0 | 527 |
| MS.gene20991.t1 | AT5G02270 | 77.437 | 359 | 49 | 4 | 1 | 332 | 1 | 354 | 0.0 | 512 |
| MS.gene20991.t1 | AT5G44110 | 56.589 | 258 | 101 | 4 | 6 | 261 | 5 | 253 | 1.46e-99 | 295 |
| MS.gene20991.t1 | AT1G03905 | 63.793 | 232 | 77 | 4 | 36 | 263 | 28 | 256 | 1.88e-99 | 295 |
| MS.gene20991.t1 | AT1G03905 | 62.500 | 200 | 64 | 4 | 67 | 263 | 1 | 192 | 8.92e-82 | 248 |
| MS.gene20991.t1 | AT1G03905 | 62.500 | 200 | 64 | 4 | 67 | 263 | 1 | 192 | 8.92e-82 | 248 |
| MS.gene20991.t1 | AT1G03905 | 62.500 | 200 | 64 | 4 | 67 | 263 | 1 | 192 | 8.92e-82 | 248 |
| MS.gene20991.t1 | AT5G44110 | 57.075 | 212 | 81 | 3 | 6 | 216 | 5 | 207 | 9.14e-79 | 239 |
| MS.gene20991.t1 | AT5G44110 | 62.667 | 150 | 50 | 2 | 67 | 216 | 1 | 144 | 1.46e-60 | 191 |
| MS.gene20991.t1 | AT5G44110 | 56.725 | 171 | 64 | 3 | 6 | 175 | 5 | 166 | 3.46e-59 | 190 |
Find 93 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGAACACGAACCATTTC+AGG | 0.175968 | 1.3:-60096282 | None:intergenic |
| AATATATGTCATGCCTTAAA+TGG | 0.196234 | 1.3:-60100353 | None:intergenic |
| CCTGAAATGGTTCGTGTTCT+TGG | 0.211482 | 1.3:+60096282 | MS.gene20991:CDS |
| AGTTTCTTTGACTTTCTCTA+TGG | 0.218624 | 1.3:-60100775 | None:intergenic |
| GGGTCTCCTCAAACCATTTA+AGG | 0.220345 | 1.3:+60100340 | MS.gene20991:CDS |
| TCTTTGATCTCAACCGTAAT+TGG | 0.227019 | 1.3:-60095993 | None:intergenic |
| CCTTTCCTAGGTTCTTCTTC+TGG | 0.235704 | 1.3:+60100472 | MS.gene20991:intron |
| TCTGGTGATCTTTGTTATCT+TGG | 0.240796 | 1.3:+60096339 | MS.gene20991:CDS |
| TCTGCCGAGAAAATGATATT+TGG | 0.245834 | 1.3:+60099460 | MS.gene20991:CDS |
| ATTAGCTCTGCTCTTCTTGC+AGG | 0.255307 | 1.3:-60099499 | None:intergenic |
| TCAACTTGCTTATCAAATTC+AGG | 0.268450 | 1.3:-60101111 | None:intergenic |
| GATACTACTTTAACTTCTTC+TGG | 0.277616 | 1.3:+60096321 | MS.gene20991:CDS |
| ACTACAATTCTGAAGATATT+AGG | 0.310572 | 1.3:+60096240 | MS.gene20991:CDS |
| AATATACATACAATATTTGT+TGG | 0.342577 | 1.3:-60100623 | None:intergenic |
| AAGAAGAGTGCAAATTTGTA+TGG | 0.373325 | 1.3:+60100319 | MS.gene20991:CDS |
| GAATTTGATAAGCAAGTTGA+TGG | 0.381823 | 1.3:+60101114 | MS.gene20991:CDS |
| TTCAGATTCAAAGCCAATTA+CGG | 0.384221 | 1.3:+60095980 | MS.gene20991:CDS |
| AAGAAGAGCAGAGCTAATTA+AGG | 0.392285 | 1.3:+60099504 | MS.gene20991:CDS |
| TGCAGAGAACAGTAGAAGTT+TGG | 0.392482 | 1.3:+60101028 | MS.gene20991:intron |
| ACATATGGTGGAACCTGAAA+TGG | 0.405372 | 1.3:+60096269 | MS.gene20991:CDS |
| TATTAGACATCAATCTTTCA+TGG | 0.406448 | 1.3:+60100267 | MS.gene20991:CDS |
| ATAGAAGACAAAGGAAAGAA+AGG | 0.411481 | 1.3:+60101073 | MS.gene20991:CDS |
| TCAAAACTCGGTTTGAGCTT+AGG | 0.411975 | 1.3:-60101245 | None:intergenic |
| GGAGGATGACCGTCGATTCC+AGG | 0.422123 | 1.3:-60096032 | None:intergenic |
| GAGCTGAAATTCACTTATCC+TGG | 0.427324 | 1.3:+60096014 | MS.gene20991:CDS |
| CACTCTTCTTCTTTGACCAT+CGG | 0.430083 | 1.3:-60100306 | None:intergenic |
| CCTTCTGAAGTTTCTAAGAA+AGG | 0.430504 | 1.3:+60100535 | MS.gene20991:CDS |
| CGGTTACATTCCACCATTGC+CGG | 0.435159 | 1.3:+60101207 | MS.gene20991:CDS |
| CCGGTTCGAGTTACTAATAA+TGG | 0.435246 | 1.3:+60101171 | MS.gene20991:CDS |
| GGTGATCTTTGTTATCTTGG+TGG | 0.436365 | 1.3:+60096342 | MS.gene20991:CDS |
| GCAGAAATGTCCATCTGTAT+TGG | 0.437756 | 1.3:-60099442 | None:intergenic |
| TGCCTTCTCGTTGGATCCAA+TGG | 0.439598 | 1.3:+60096113 | MS.gene20991:CDS |
| TTCTCTCTCAATCTCTTCTC+CGG | 0.439832 | 1.3:+60096083 | MS.gene20991:CDS |
| GAAATGCTCAATTAGCGGTT+TGG | 0.442612 | 1.3:-60096063 | None:intergenic |
| TATGCAACACATATATTTGA+CGG | 0.455846 | 1.3:+60100587 | MS.gene20991:CDS |
| AACTAGCAAACTGTCACTAA+TGG | 0.457560 | 1.3:+60100794 | MS.gene20991:CDS |
| ACTAATAATGGCTGGGCCGC+AGG | 0.461635 | 1.3:+60101183 | MS.gene20991:CDS |
| GTTTCTTTGACTTTCTCTAT+GGG | 0.462744 | 1.3:-60100774 | None:intergenic |
| TTCGAGTTACTAATAATGGC+TGG | 0.463711 | 1.3:+60101175 | MS.gene20991:CDS |
| AAAATGATATTTGGTGTGGC+TGG | 0.465667 | 1.3:+60099469 | MS.gene20991:CDS |
| AGGGGATCCTGCACGAGCTC+CGG | 0.470810 | 1.3:+60101152 | MS.gene20991:CDS |
| TATTTGACGGTCTTGAGGAT+TGG | 0.475920 | 1.3:+60100600 | MS.gene20991:CDS |
| AGAGAAATTACCAGCGCCAT+TGG | 0.480559 | 1.3:-60096129 | None:intergenic |
| GTTGATGGAAGCCGTGTAGT+TGG | 0.483883 | 1.3:+60101129 | MS.gene20991:CDS |
| AACGAGAAGGCACCGATCAC+CGG | 0.485960 | 1.3:-60096102 | None:intergenic |
| TCAATCTCTTCTCCGGTGAT+CGG | 0.491607 | 1.3:+60096090 | MS.gene20991:CDS |
| ATGTGTTGCATATATAATAG+TGG | 0.491771 | 1.3:-60100576 | None:intergenic |
| AGAGAGAAATGCTCAATTAG+CGG | 0.499738 | 1.3:-60096068 | None:intergenic |
| GTCATGCCTTAAATGGTTTG+AGG | 0.502728 | 1.3:-60100346 | None:intergenic |
| TCAATTAGCGGTTTGGAACC+CGG | 0.503241 | 1.3:-60096056 | None:intergenic |
| CCATTATTAGTAACTCGAAC+CGG | 0.503384 | 1.3:-60101171 | None:intergenic |
| TATCAGGTTTATGTTGCTCA+TGG | 0.505115 | 1.3:+60100732 | MS.gene20991:intron |
| AGGTTTATGTTGCTCATGGA+AGG | 0.510815 | 1.3:+60100736 | MS.gene20991:intron |
| TTATGTTGCTCATGGAAGGC+TGG | 0.512155 | 1.3:+60100740 | MS.gene20991:CDS |
| CTCGTTGGATCCAATGGCGC+TGG | 0.512963 | 1.3:+60096119 | MS.gene20991:CDS |
| AGCGGTTTGGAACCCGGCGG+AGG | 0.521968 | 1.3:-60096050 | None:intergenic |
| AATCGACGGTCATCCTCCGC+CGG | 0.525327 | 1.3:+60096037 | MS.gene20991:CDS |
| ACTCGAACCGGAGCTCGTGC+AGG | 0.533231 | 1.3:-60101159 | None:intergenic |
| AAGAAAGGAATGTGATGAGA+GGG | 0.539356 | 1.3:+60100550 | MS.gene20991:CDS |
| GATATTAGGAGGGAAACATA+TGG | 0.550354 | 1.3:+60096254 | MS.gene20991:CDS |
| AGGAAAGAAAGGAAGGCTGC+TGG | 0.552158 | 1.3:+60101084 | MS.gene20991:CDS |
| AAATGATATTTGGTGTGGCT+GGG | 0.553247 | 1.3:+60099470 | MS.gene20991:CDS |
| GGTGATCGGTGCCTTCTCGT+TGG | 0.553650 | 1.3:+60096104 | MS.gene20991:CDS |
| ACATATATTTGACGGTCTTG+AGG | 0.557218 | 1.3:+60100595 | MS.gene20991:CDS |
| GATGGAAGCCGTGTAGTTGG+AGG | 0.557443 | 1.3:+60101132 | MS.gene20991:CDS |
| CTTTGAAGTTCCAATACAGA+TGG | 0.561595 | 1.3:+60099432 | MS.gene20991:CDS |
| AAGACAAAGGAAAGAAAGGA+AGG | 0.565520 | 1.3:+60101077 | MS.gene20991:CDS |
| GAACAGTAGAAGTTTGGCTA+CGG | 0.570397 | 1.3:+60101034 | MS.gene20991:CDS |
| ACAATTCTGAAGATATTAGG+AGG | 0.572545 | 1.3:+60096243 | MS.gene20991:CDS |
| ATGGAAGCCGTGTAGTTGGA+GGG | 0.572562 | 1.3:+60101133 | MS.gene20991:CDS |
| ATCGACGGTCATCCTCCGCC+GGG | 0.574996 | 1.3:+60096038 | MS.gene20991:CDS |
| TTCACTTATCCTGGAATCGA+CGG | 0.578787 | 1.3:+60096023 | MS.gene20991:CDS |
| AAACTCGGTTTGAGCTTAGG+AGG | 0.579078 | 1.3:-60101242 | None:intergenic |
| AGAAGAGTGCAAATTTGTAT+GGG | 0.581883 | 1.3:+60100320 | MS.gene20991:CDS |
| TCGAGTTACTAATAATGGCT+GGG | 0.593054 | 1.3:+60101176 | MS.gene20991:CDS |
| TCTTTGTTATCTTGGTGGTG+AGG | 0.593435 | 1.3:+60096347 | MS.gene20991:CDS |
| CAGCTCTTGCTAGAACATCA+AGG | 0.597648 | 1.3:-60100511 | None:intergenic |
| CGCCATTGGATCCAACGAGA+AGG | 0.598957 | 1.3:-60096115 | None:intergenic |
| CCTTTCTTAGAAACTTCAGA+AGG | 0.599066 | 1.3:-60100535 | None:intergenic |
| TAAGAAAGGAATGTGATGAG+AGG | 0.615451 | 1.3:+60100549 | MS.gene20991:CDS |
| AGTAGAAGTTTGGCTACGGA+AGG | 0.617342 | 1.3:+60101038 | MS.gene20991:CDS |
| ATAATGGCTGGGCCGCAGGT+CGG | 0.623795 | 1.3:+60101187 | MS.gene20991:CDS |
| CTTGCTTATCAAATTCAGGA+AGG | 0.634035 | 1.3:-60101107 | None:intergenic |
| ATTAGGAGGGAAACATATGG+TGG | 0.662252 | 1.3:+60096257 | MS.gene20991:CDS |
| CAGGATCCCCTCCAACTACA+CGG | 0.662648 | 1.3:-60101140 | None:intergenic |
| CAATTCTGAAGATATTAGGA+GGG | 0.663049 | 1.3:+60096244 | MS.gene20991:CDS |
| TGGAAGCCGTGTAGTTGGAG+GGG | 0.669936 | 1.3:+60101134 | MS.gene20991:CDS |
| GGTGGAATGTAACCGACCTG+CGG | 0.673773 | 1.3:-60101199 | None:intergenic |
| AGATTGCATAAAGTATCCGA+TGG | 0.675760 | 1.3:+60100290 | MS.gene20991:CDS |
| CGAGAAAATGATATTTGGTG+TGG | 0.678669 | 1.3:+60099465 | MS.gene20991:CDS |
| AGAAAGGAATGTGATGAGAG+GGG | 0.702733 | 1.3:+60100551 | MS.gene20991:CDS |
| GAGATGAAGATAGAAGACAA+AGG | 0.719714 | 1.3:+60101064 | MS.gene20991:CDS |
| ATTAGCGGTTTGGAACCCGG+CGG | 0.782107 | 1.3:-60096053 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAAGAAAATCTTT+GGG | + | chr1.3:60099990-60100009 | MS.gene20991:intron | 10.0% |
| !! | TAAAATATAAAGAAAATCTT+TGG | + | chr1.3:60099989-60100008 | MS.gene20991:intron | 10.0% |
| !! | TTTATAATAATAAAGGATAA+AGG | + | chr1.3:60098691-60098710 | MS.gene20991:intron | 10.0% |
| !! | AAATATAAAGAAAATCTTTG+GGG | + | chr1.3:60099991-60100010 | MS.gene20991:intron | 15.0% |
| !! | AAGTTATATTATATAACCTA+TGG | + | chr1.3:60100908-60100927 | MS.gene20991:intron | 15.0% |
| !! | AATATACATACAATATTTGT+TGG | - | chr1.3:60100626-60100645 | None:intergenic | 15.0% |
| !! | AATGTAATTAATAAACTTGA+TGG | - | chr1.3:60096709-60096728 | None:intergenic | 15.0% |
| !! | CAAAAATAAATTAATCCAAA+CGG | - | chr1.3:60098909-60098928 | None:intergenic | 15.0% |
| !! | TTAGCAATAAATATATGTTT+AGG | + | chr1.3:60098293-60098312 | MS.gene20991:intron | 15.0% |
| !!! | GCTATCATTATTTTAAATTA+GGG | - | chr1.3:60096479-60096498 | None:intergenic | 15.0% |
| !!! | GGTTTGTTTTTTTTTTTTTT+GGG | + | chr1.3:60099372-60099391 | MS.gene20991:intron | 15.0% |
| !!! | TATAATATAACTTGTATTCA+AGG | - | chr1.3:60100901-60100920 | None:intergenic | 15.0% |
| !!! | TCTAGCTTTTATAATAATAA+AGG | + | chr1.3:60098684-60098703 | MS.gene20991:intron | 15.0% |
| !!! | TGCTATCATTATTTTAAATT+AGG | - | chr1.3:60096480-60096499 | None:intergenic | 15.0% |
| !!! | TGGTTTGTTTTTTTTTTTTT+TGG | + | chr1.3:60099371-60099390 | MS.gene20991:intron | 15.0% |
| !! | ATCTGTATCGTATAATTATA+AGG | - | chr1.3:60097096-60097115 | None:intergenic | 20.0% |
| !! | ATGATAGAAGTAATTATTCA+TGG | - | chr1.3:60099665-60099684 | None:intergenic | 20.0% |
| !! | ATTATTATAAAAGCTAGACT+TGG | - | chr1.3:60098682-60098701 | None:intergenic | 20.0% |
| !! | ATTGCATAAATGTATATCAA+AGG | + | chr1.3:60097862-60097881 | MS.gene20991:intron | 20.0% |
| !! | CAATAAATATATGTTTAGGA+GGG | + | chr1.3:60098297-60098316 | MS.gene20991:intron | 20.0% |
| !! | GATTGATAAAATACTTAGTT+TGG | + | chr1.3:60097328-60097347 | MS.gene20991:intron | 20.0% |
| !! | GTAATAAATGCTAATCAAAT+CGG | - | chr1.3:60098486-60098505 | None:intergenic | 20.0% |
| !! | TACCAAACTAACTTATAATA+CGG | + | chr1.3:60097216-60097235 | MS.gene20991:intron | 20.0% |
| !! | TATATGCTTGAATTTGATAT+TGG | + | chr1.3:60100058-60100077 | MS.gene20991:intron | 20.0% |
| !! | TCTGTATCGTATAATTATAA+GGG | - | chr1.3:60097095-60097114 | None:intergenic | 20.0% |
| !! | TGTAATATCTAAACATGAAA+AGG | - | chr1.3:60100404-60100423 | None:intergenic | 20.0% |
| !!! | AAATTGAAATTTGTAGGTTT+TGG | - | chr1.3:60099254-60099273 | None:intergenic | 20.0% |
| !!! | AACTTGATACAATACTTTTA+AGG | - | chr1.3:60097068-60097087 | None:intergenic | 20.0% |
| !!! | ATTATAAGTTAGTTTGGTAA+GGG | - | chr1.3:60097215-60097234 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTTTTTGGGAT+GGG | + | chr1.3:60099377-60099396 | MS.gene20991:intron | 20.0% |
| !!! | TATAATCGATTTACAATTGT+TGG | - | chr1.3:60097289-60097308 | None:intergenic | 20.0% |
| !!! | TATTATAAGTTAGTTTGGTA+AGG | - | chr1.3:60097216-60097235 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTTTTTTTGGGA+TGG | + | chr1.3:60099376-60099395 | MS.gene20991:intron | 20.0% |
| !!! | TTTGATTTTTTGTTGTTACT+AGG | + | chr1.3:60096213-60096232 | MS.gene20991:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTGGGATG+GGG | + | chr1.3:60099378-60099397 | MS.gene20991:intron | 20.0% |
| ! | AAAATAGAGTTTCAATCAAC+GGG | + | chr1.3:60098260-60098279 | MS.gene20991:intron | 25.0% |
| ! | AAAATAGAGTTTGAATCAAC+GGG | + | chr1.3:60098223-60098242 | MS.gene20991:intron | 25.0% |
| ! | AATAGATTGCTAACATTTCA+AGG | + | chr1.3:60097646-60097665 | MS.gene20991:intron | 25.0% |
| ! | AATATATGTCATGCCTTAAA+TGG | - | chr1.3:60100356-60100375 | None:intergenic | 25.0% |
| ! | AATTAATTATTAGCAAGTGC+AGG | - | chr1.3:60098735-60098754 | None:intergenic | 25.0% |
| ! | ACACATATAATTGATTGAGA+AGG | - | chr1.3:60100832-60100851 | None:intergenic | 25.0% |
| ! | AGATTAGATTAGCAATTAGT+AGG | + | chr1.3:60098448-60098467 | MS.gene20991:intron | 25.0% |
| ! | ATAATGATAGCAAATCGATA+AGG | + | chr1.3:60096488-60096507 | MS.gene20991:intron | 25.0% |
| ! | ATACGTTACGAAATATTTCA+TGG | + | chr1.3:60096550-60096569 | MS.gene20991:intron | 25.0% |
| ! | ATAGTTATATGTGTACATAG+AGG | + | chr1.3:60097808-60097827 | MS.gene20991:intron | 25.0% |
| ! | ATGTGTTGCATATATAATAG+TGG | - | chr1.3:60100579-60100598 | None:intergenic | 25.0% |
| ! | ATTAATTATTAGCAAGTGCA+GGG | - | chr1.3:60098734-60098753 | None:intergenic | 25.0% |
| ! | CTCTGTTTAGTAAAAAATAG+CGG | - | chr1.3:60099294-60099313 | None:intergenic | 25.0% |
| ! | GAAAATAGAGTTTCAATCAA+CGG | + | chr1.3:60098259-60098278 | MS.gene20991:intron | 25.0% |
| ! | GAAAATAGAGTTTGAATCAA+CGG | + | chr1.3:60098222-60098241 | MS.gene20991:intron | 25.0% |
| ! | GATAGCAAATTGAAATTTGT+AGG | - | chr1.3:60099260-60099279 | None:intergenic | 25.0% |
| ! | GATTAGATTAGCAATTAGTA+GGG | + | chr1.3:60098600-60098619 | MS.gene20991:intron | 25.0% |
| ! | GCAATAAATATATGTTTAGG+AGG | + | chr1.3:60098296-60098315 | MS.gene20991:intron | 25.0% |
| ! | GGATAAAGGATTATACTAAT+TGG | + | chr1.3:60098705-60098724 | MS.gene20991:intron | 25.0% |
| ! | GTGTATTTGATGAAATCTAA+AGG | + | chr1.3:60097165-60097184 | MS.gene20991:intron | 25.0% |
| ! | GTTAGAAATTATCTTGCAAA+TGG | + | chr1.3:60096890-60096909 | MS.gene20991:intron | 25.0% |
| ! | TACCGTATTATAAGTTAGTT+TGG | - | chr1.3:60097221-60097240 | None:intergenic | 25.0% |
| ! | TATCGTATAATTATAAGGGT+TGG | - | chr1.3:60097091-60097110 | None:intergenic | 25.0% |
| ! | TATGCAACACATATATTTGA+CGG | + | chr1.3:60100587-60100606 | MS.gene20991:CDS | 25.0% |
| ! | TATTAGACATCAATCTTTCA+TGG | + | chr1.3:60100267-60100286 | MS.gene20991:CDS | 25.0% |
| ! | TATTATATAACCTATGGTTG+TGG | + | chr1.3:60100914-60100933 | MS.gene20991:intron | 25.0% |
| ! | TCGCTTATATATGATATCTA+CGG | + | chr1.3:60098369-60098388 | MS.gene20991:intron | 25.0% |
| ! | TGCATATATATAGTTGTCTT+TGG | + | chr1.3:60100202-60100221 | MS.gene20991:intron | 25.0% |
| ! | TTACAAAACCATCAACATAA+AGG | + | chr1.3:60097352-60097371 | MS.gene20991:intron | 25.0% |
| ! | TTAGTCAAATACTCTTATTG+TGG | - | chr1.3:60099855-60099874 | None:intergenic | 25.0% |
| ! | TTCTATCAAATTGCTAATGT+GGG | + | chr1.3:60099344-60099363 | MS.gene20991:intron | 25.0% |
| ! | TTGAATTAATTGTGCCTAAT+TGG | + | chr1.3:60100996-60101015 | MS.gene20991:intron | 25.0% |
| ! | TTTCTATCAAATTGCTAATG+TGG | + | chr1.3:60099343-60099362 | MS.gene20991:intron | 25.0% |
| !! | ACTACAATTCTGAAGATATT+AGG | + | chr1.3:60096240-60096259 | MS.gene20991:CDS | 25.0% |
| !! | AGTACGTAATGATAAAGTTT+TGG | - | chr1.3:60100124-60100143 | None:intergenic | 25.0% |
| !! | ATTTTCAGAGTTTGAATCAA+CGG | + | chr1.3:60098542-60098561 | MS.gene20991:intron | 25.0% |
| !! | GAATTTTATCAAACCTCTAA+TGG | - | chr1.3:60097708-60097727 | None:intergenic | 25.0% |
| !! | TTGAATTTGATATTGGTTGA+TGG | + | chr1.3:60100065-60100084 | MS.gene20991:intron | 25.0% |
| !! | TTTTATCCATTGATAAGTGT+TGG | + | chr1.3:60096915-60096934 | MS.gene20991:intron | 25.0% |
| !!! | AGAGCAATTTTTTACTTGTA+AGG | + | chr1.3:60100440-60100459 | MS.gene20991:intron | 25.0% |
| !!! | TACACTAATGAATTTTGACT+TGG | - | chr1.3:60097150-60097169 | None:intergenic | 25.0% |
| !!! | TATATGCTTCTCATTTTAGT+TGG | + | chr1.3:60096964-60096983 | MS.gene20991:intron | 25.0% |
| !!! | TTGCTGGATTGTTTTTATTT+TGG | - | chr1.3:60097407-60097426 | None:intergenic | 25.0% |
| AAAGGTCATGATAAATGCTT+GGG | + | chr1.3:60097880-60097899 | MS.gene20991:intron | 30.0% | |
| AACAACTTAAATTGTAGACC+AGG | + | chr1.3:60100941-60100960 | MS.gene20991:intron | 30.0% | |
| AAGTGAAAATACGGTTTGAA+CGG | + | chr1.3:60098573-60098592 | MS.gene20991:intron | 30.0% | |
| AAGTTATACGAGAGAAAATG+AGG | + | chr1.3:60098194-60098213 | MS.gene20991:intron | 30.0% | |
| AATTAGTAGGGAAAAATGCT+AGG | + | chr1.3:60098612-60098631 | MS.gene20991:intron | 30.0% | |
| ACAATTACAGATGCATAATG+TGG | - | chr1.3:60097032-60097051 | None:intergenic | 30.0% | |
| ATAAATGCTTGGGTGTTTAA+TGG | + | chr1.3:60097890-60097909 | MS.gene20991:intron | 30.0% | |
| ATAACACAAACGAAATCATG+AGG | + | chr1.3:60097306-60097325 | MS.gene20991:intron | 30.0% | |
| ATACAGATGAAAAGTGAGAT+TGG | + | chr1.3:60097108-60097127 | MS.gene20991:intron | 30.0% | |
| ATAGAAGACAAAGGAAAGAA+AGG | + | chr1.3:60101073-60101092 | MS.gene20991:CDS | 30.0% | |
| ATATACAGAAATGAACGCAA+AGG | - | chr1.3:60099931-60099950 | None:intergenic | 30.0% | |
| ATCGCATTAAATGATAGCAA+GGG | + | chr1.3:60098007-60098026 | MS.gene20991:intron | 30.0% | |
| ATCTAATGCCTTTATGTTGA+TGG | - | chr1.3:60097363-60097382 | None:intergenic | 30.0% | |
| ATGGTAAACGACATTTGATA+GGG | + | chr1.3:60096569-60096588 | MS.gene20991:intron | 30.0% | |
| ATTAGTAGGGAAAAATGCTA+GGG | + | chr1.3:60098613-60098632 | MS.gene20991:intron | 30.0% | |
| CAAAATGTTAGACTTCTAAG+TGG | - | chr1.3:60096633-60096652 | None:intergenic | 30.0% | |
| CAGCTTATAACAATGAAAAC+TGG | + | chr1.3:60097256-60097275 | MS.gene20991:intron | 30.0% | |
| CTGCATATTCAAAACCAATT+AGG | - | chr1.3:60101013-60101032 | None:intergenic | 30.0% | |
| CTGTCAAACAAAATTGAGAT+TGG | - | chr1.3:60097507-60097526 | None:intergenic | 30.0% | |
| GGGATGATGTTAAAAAGAAA+AGG | - | chr1.3:60097195-60097214 | None:intergenic | 30.0% | |
| GGTGTGATTAAGTGAAAATA+CGG | + | chr1.3:60098564-60098583 | MS.gene20991:intron | 30.0% | |
| GTATATTCATAAGCTTGTCA+AGG | + | chr1.3:60098970-60098989 | MS.gene20991:intron | 30.0% | |
| GTGGAGCATATATAAACAAA+TGG | - | chr1.3:60097013-60097032 | None:intergenic | 30.0% | |
| GTGTGAAAATAGAGTTTGAA+CGG | + | chr1.3:60098422-60098441 | MS.gene20991:intron | 30.0% | |
| TAACCATACCAAAATAGCAA+TGG | - | chr1.3:60099907-60099926 | None:intergenic | 30.0% | |
| TAATGTTCACTTACAATGCA+TGG | + | chr1.3:60100151-60100170 | MS.gene20991:intron | 30.0% | |
| TAGATTAGCAATTAGTGCAA+GGG | + | chr1.3:60098452-60098471 | MS.gene20991:intron | 30.0% | |
| TGTATGTAAACTGCAAACAA+AGG | + | chr1.3:60097736-60097755 | MS.gene20991:intron | 30.0% | |
| TGTGAAAATAGAGTTTGAAC+GGG | + | chr1.3:60098423-60098442 | MS.gene20991:intron | 30.0% | |
| TTAGATTAGCAATTAGTGCA+AGG | + | chr1.3:60098451-60098470 | MS.gene20991:intron | 30.0% | |
| TTCAGAACTGAAATTACAGA+AGG | - | chr1.3:60100657-60100676 | None:intergenic | 30.0% | |
| TTCAGATTCAAAGCCAATTA+CGG | + | chr1.3:60095980-60095999 | MS.gene20991:CDS | 30.0% | |
| TTCGTTTATATTTCATCGCA+CGG | - | chr1.3:60096423-60096442 | None:intergenic | 30.0% | |
| TTTAGGAGGGAAAAATACTA+GGG | + | chr1.3:60098310-60098329 | MS.gene20991:intron | 30.0% | |
| ! | AAGAAGAGTGCAAATTTGTA+TGG | + | chr1.3:60100319-60100338 | MS.gene20991:CDS | 30.0% |
| ! | AAGGAGGTCTAAAATTGTAT+CGG | - | chr1.3:60098789-60098808 | None:intergenic | 30.0% |
| ! | ACAATTCTGAAGATATTAGG+AGG | + | chr1.3:60096243-60096262 | MS.gene20991:CDS | 30.0% |
| ! | AGAAGAGTGCAAATTTGTAT+GGG | + | chr1.3:60100320-60100339 | MS.gene20991:CDS | 30.0% |
| ! | AGTTTCTTTGACTTTCTCTA+TGG | - | chr1.3:60100778-60100797 | None:intergenic | 30.0% |
| ! | CAATTCTGAAGATATTAGGA+GGG | + | chr1.3:60096244-60096263 | MS.gene20991:CDS | 30.0% |
| ! | CACACCAAATATCATTTTCT+CGG | - | chr1.3:60099467-60099486 | None:intergenic | 30.0% |
| ! | CATTTCAATGCTCTTTTATC+AGG | + | chr1.3:60100716-60100735 | MS.gene20991:intron | 30.0% |
| ! | GAATTTGATAAGCAAGTTGA+TGG | + | chr1.3:60101114-60101133 | MS.gene20991:CDS | 30.0% |
| ! | GATACTACTTTAACTTCTTC+TGG | + | chr1.3:60096321-60096340 | MS.gene20991:CDS | 30.0% |
| ! | GTTTCTTTGACTTTCTCTAT+GGG | - | chr1.3:60100777-60100796 | None:intergenic | 30.0% |
| ! | TATAAAGAAAATCTTTGGGG+TGG | + | chr1.3:60099994-60100013 | MS.gene20991:intron | 30.0% |
| ! | TCAACTTGCTTATCAAATTC+AGG | - | chr1.3:60101114-60101133 | None:intergenic | 30.0% |
| ! | TTATAAAAGCTAGACTTGGT+TGG | - | chr1.3:60098678-60098697 | None:intergenic | 30.0% |
| ! | TTTTCAGAGTTTGAATCAAC+GGG | + | chr1.3:60098543-60098562 | MS.gene20991:intron | 30.0% |
| !! | AGAATGAGAGTCATTGATTT+AGG | + | chr1.3:60098819-60098838 | MS.gene20991:intron | 30.0% |
| !! | GTAGGTTTTGGTAAAATTAG+CGG | - | chr1.3:60099242-60099261 | None:intergenic | 30.0% |
| !! | GTGTGTTATTCGTTTTCAAT+TGG | + | chr1.3:60098163-60098182 | MS.gene20991:intron | 30.0% |
| !! | TCATTGATTTAGGCTATGTT+TGG | + | chr1.3:60098829-60098848 | MS.gene20991:intron | 30.0% |
| !! | TTGTGCAATTTTAGTCCTAT+TGG | - | chr1.3:60097467-60097486 | None:intergenic | 30.0% |
| !!! | TTTCCATTGCTATTTTGGTA+TGG | + | chr1.3:60099901-60099920 | MS.gene20991:intron | 30.0% |
| AAATTGCTAATGTGGGTGAT+TGG | + | chr1.3:60099351-60099370 | MS.gene20991:intron | 35.0% | |
| AAATTGTAAATTGCACAGCC+TGG | - | chr1.3:60100962-60100981 | None:intergenic | 35.0% | |
| AAATTTCTTCATGTCAGACG+AGG | + | chr1.3:60099586-60099605 | MS.gene20991:intron | 35.0% | |
| AACAGATGCAAAATGCCAAT+AGG | + | chr1.3:60097449-60097468 | MS.gene20991:intron | 35.0% | |
| AACTAGCAAACTGTCACTAA+TGG | + | chr1.3:60100794-60100813 | MS.gene20991:CDS | 35.0% | |
| AAGAAAGGAATGTGATGAGA+GGG | + | chr1.3:60100550-60100569 | MS.gene20991:CDS | 35.0% | |
| AAGAAGAGCAGAGCTAATTA+AGG | + | chr1.3:60099504-60099523 | MS.gene20991:CDS | 35.0% | |
| AAGACAAAGGAAAGAAAGGA+AGG | + | chr1.3:60101077-60101096 | MS.gene20991:CDS | 35.0% | |
| AATTAACAGTTTACTCGTCG+TGG | + | chr1.3:60099799-60099818 | MS.gene20991:intron | 35.0% | |
| ACATATATTTGACGGTCTTG+AGG | + | chr1.3:60100595-60100614 | MS.gene20991:CDS | 35.0% | |
| ACATGATGTTGAAACCATGT+TGG | - | chr1.3:60097681-60097700 | None:intergenic | 35.0% | |
| ACCAAAATAGCAATGGAAAG+AGG | - | chr1.3:60099900-60099919 | None:intergenic | 35.0% | |
| ACCAACTATAAGCACGAAAA+TGG | - | chr1.3:60098860-60098879 | None:intergenic | 35.0% | |
| ACTAGGGATTAGGGTAAATT+AGG | + | chr1.3:60098326-60098345 | MS.gene20991:intron | 35.0% | |
| AGAGAGAAATGCTCAATTAG+CGG | - | chr1.3:60096071-60096090 | None:intergenic | 35.0% | |
| AGATGAAAAGTGAGATTGGT+TGG | + | chr1.3:60097112-60097131 | MS.gene20991:intron | 35.0% | |
| AGATTAGCAATTAGTGCAAG+GGG | + | chr1.3:60098453-60098472 | MS.gene20991:intron | 35.0% | |
| AGGGAAAAATACTAGGGATT+AGG | + | chr1.3:60098316-60098335 | MS.gene20991:intron | 35.0% | |
| AGGGTAAATTAGGGTGAATT+AGG | + | chr1.3:60098336-60098355 | MS.gene20991:intron | 35.0% | |
| AGTGAAAATACGGTTTGAAC+GGG | + | chr1.3:60098574-60098593 | MS.gene20991:intron | 35.0% | |
| ATGTAAACTGCAAACAAAGG+AGG | + | chr1.3:60097739-60097758 | MS.gene20991:intron | 35.0% | |
| CAAAGGTCATGATAAATGCT+TGG | + | chr1.3:60097879-60097898 | MS.gene20991:intron | 35.0% | |
| CACCTTAGGCAATAAGAATT+TGG | + | chr1.3:60096766-60096785 | MS.gene20991:intron | 35.0% | |
| CAGACAATGTTGATCGTAAT+TGG | + | chr1.3:60097541-60097560 | MS.gene20991:intron | 35.0% | |
| CATGGTAAACGACATTTGAT+AGG | + | chr1.3:60096568-60096587 | MS.gene20991:intron | 35.0% | |
| CATTAAATGATAGCAAGGGA+GGG | + | chr1.3:60098011-60098030 | MS.gene20991:intron | 35.0% | |
| CCATTATTAGTAACTCGAAC+CGG | - | chr1.3:60101174-60101193 | None:intergenic | 35.0% | |
| CCTTTCTTAGAAACTTCAGA+AGG | - | chr1.3:60100538-60100557 | None:intergenic | 35.0% | |
| CTAGGGATTAGGGTAAATTA+GGG | + | chr1.3:60098327-60098346 | MS.gene20991:intron | 35.0% | |
| CTGATGTGTTGTCTTCTTTA+TGG | + | chr1.3:60100378-60100397 | MS.gene20991:intron | 35.0% | |
| CTTGCTTATCAAATTCAGGA+AGG | - | chr1.3:60101110-60101129 | None:intergenic | 35.0% | |
| GACCAAATTCTTATTGCCTA+AGG | - | chr1.3:60096771-60096790 | None:intergenic | 35.0% | |
| GAGATGAAGATAGAAGACAA+AGG | + | chr1.3:60101064-60101083 | MS.gene20991:CDS | 35.0% | |
| GATATTAGGAGGGAAACATA+TGG | + | chr1.3:60096254-60096273 | MS.gene20991:CDS | 35.0% | |
| GATCGCATTAAATGATAGCA+AGG | + | chr1.3:60098006-60098025 | MS.gene20991:intron | 35.0% | |
| GCAACTTTATTCAATGTTGC+TGG | - | chr1.3:60097423-60097442 | None:intergenic | 35.0% | |
| GGGAAAAATACTAGGGATTA+GGG | + | chr1.3:60098317-60098336 | MS.gene20991:intron | 35.0% | |
| GGGTAAATTAGGGTGAATTA+GGG | + | chr1.3:60098337-60098356 | MS.gene20991:intron | 35.0% | |
| GTACATAGAGGATGATGATT+GGG | + | chr1.3:60097820-60097839 | MS.gene20991:intron | 35.0% | |
| GTTCTTCCAACACTTATCAA+TGG | - | chr1.3:60096924-60096943 | None:intergenic | 35.0% | |
| GTTTAGGAGGGAAAAATACT+AGG | + | chr1.3:60098309-60098328 | MS.gene20991:intron | 35.0% | |
| TAAGAAAGGAATGTGATGAG+AGG | + | chr1.3:60100549-60100568 | MS.gene20991:CDS | 35.0% | |
| TATCAGGTTTATGTTGCTCA+TGG | + | chr1.3:60100732-60100751 | MS.gene20991:intron | 35.0% | |
| TCGAGTTACTAATAATGGCT+GGG | + | chr1.3:60101176-60101195 | MS.gene20991:CDS | 35.0% | |
| TCGTTTATATTTCATCGCAC+GGG | - | chr1.3:60096422-60096441 | None:intergenic | 35.0% | |
| TCTCATTCTATGTCAGAGAA+AGG | - | chr1.3:60098808-60098827 | None:intergenic | 35.0% | |
| TCTGCCGAGAAAATGATATT+TGG | + | chr1.3:60099460-60099479 | MS.gene20991:CDS | 35.0% | |
| TCTTTGATCTCAACCGTAAT+TGG | - | chr1.3:60095996-60096015 | None:intergenic | 35.0% | |
| TGTAAACTGCAAACAAAGGA+GGG | + | chr1.3:60097740-60097759 | MS.gene20991:intron | 35.0% | |
| TGTACATAGAGGATGATGAT+TGG | + | chr1.3:60097819-60097838 | MS.gene20991:intron | 35.0% | |
| TTGACAGCGTCACAATTAAT+AGG | - | chr1.3:60096684-60096703 | None:intergenic | 35.0% | |
| TTGATCGTAATTGGATCCAA+TGG | + | chr1.3:60097550-60097569 | MS.gene20991:intron | 35.0% | |
| TTGGGTGTTTAATGGTTAGT+TGG | + | chr1.3:60097898-60097917 | MS.gene20991:intron | 35.0% | |
| ! | AGATTGCATAAAGTATCCGA+TGG | + | chr1.3:60100290-60100309 | MS.gene20991:CDS | 35.0% |
| ! | CGAGAAAATGATATTTGGTG+TGG | + | chr1.3:60099465-60099484 | MS.gene20991:CDS | 35.0% |
| ! | TCTGGTGATCTTTGTTATCT+TGG | + | chr1.3:60096339-60096358 | MS.gene20991:CDS | 35.0% |
| ! | TGGGTGTTTAATGGTTAGTT+GGG | + | chr1.3:60097899-60097918 | MS.gene20991:intron | 35.0% |
| ! | TTCGAGTTACTAATAATGGC+TGG | + | chr1.3:60101175-60101194 | MS.gene20991:CDS | 35.0% |
| !! | AAAATGATATTTGGTGTGGC+TGG | + | chr1.3:60099469-60099488 | MS.gene20991:CDS | 35.0% |
| !! | AAATGATATTTGGTGTGGCT+GGG | + | chr1.3:60099470-60099489 | MS.gene20991:CDS | 35.0% |
| !! | AAGAGCATTGAAATGACAGA+AGG | - | chr1.3:60100711-60100730 | None:intergenic | 35.0% |
| !! | CCTTCTGAAGTTTCTAAGAA+AGG | + | chr1.3:60100535-60100554 | MS.gene20991:CDS | 35.0% |
| !! | CTTTGAAGTTCCAATACAGA+TGG | + | chr1.3:60099432-60099451 | MS.gene20991:CDS | 35.0% |
| !! | TCATGTTTTTACAGCTCCAT+TGG | - | chr1.3:60097569-60097588 | None:intergenic | 35.0% |
| !!! | TCCTCTTTCCATTGCTATTT+TGG | + | chr1.3:60099896-60099915 | MS.gene20991:intron | 35.0% |
| AAAATTGCTTCAAGCTCGTG+AGG | - | chr1.3:60099135-60099154 | None:intergenic | 40.0% | |
| ACATCATGTTCAGCCATTAG+AGG | + | chr1.3:60097692-60097711 | MS.gene20991:intron | 40.0% | |
| ACGCACGTGTATATATAGAG+TGG | + | chr1.3:60097768-60097787 | MS.gene20991:intron | 40.0% | |
| AGAAAGGAATGTGATGAGAG+GGG | + | chr1.3:60100551-60100570 | MS.gene20991:CDS | 40.0% | |
| AGGGAAAAATGCTAGGGATT+AGG | + | chr1.3:60098619-60098638 | MS.gene20991:intron | 40.0% | |
| AGGTTTATGTTGCTCATGGA+AGG | + | chr1.3:60100736-60100755 | MS.gene20991:intron | 40.0% | |
| ATATGAGCTGTACATGCATG+TGG | + | chr1.3:60099947-60099966 | MS.gene20991:intron | 40.0% | |
| ATTAGGAGGGAAACATATGG+TGG | + | chr1.3:60096257-60096276 | MS.gene20991:CDS | 40.0% | |
| CACTCTTCTTCTTTGACCAT+CGG | - | chr1.3:60100309-60100328 | None:intergenic | 40.0% | |
| CATTCTATGTCAGAGAAAGG+AGG | - | chr1.3:60098805-60098824 | None:intergenic | 40.0% | |
| GAAATGCTCAATTAGCGGTT+TGG | - | chr1.3:60096066-60096085 | None:intergenic | 40.0% | |
| GAACAGTAGAAGTTTGGCTA+CGG | + | chr1.3:60101034-60101053 | MS.gene20991:CDS | 40.0% | |
| GAGCTGAAATTCACTTATCC+TGG | + | chr1.3:60096014-60096033 | MS.gene20991:CDS | 40.0% | |
| GATCAACATTGTCTGTGTGA+AGG | - | chr1.3:60097536-60097555 | None:intergenic | 40.0% | |
| GCAGAAATGTCCATCTGTAT+TGG | - | chr1.3:60099445-60099464 | None:intergenic | 40.0% | |
| GCATTAAATGATAGCAAGGG+AGG | + | chr1.3:60098010-60098029 | MS.gene20991:intron | 40.0% | |
| GCTTATTCTGCGTGTTCATT+CGG | - | chr1.3:60097616-60097635 | None:intergenic | 40.0% | |
| GGGAAAAATGCTAGGGATTA+GGG | + | chr1.3:60098620-60098639 | MS.gene20991:intron | 40.0% | |
| GTAAACGTAAGAGTCACCTT+AGG | + | chr1.3:60096752-60096771 | MS.gene20991:intron | 40.0% | |
| GTCATGCCTTAAATGGTTTG+AGG | - | chr1.3:60100349-60100368 | None:intergenic | 40.0% | |
| GTTGTTTACTCCACAACCAT+AGG | - | chr1.3:60100927-60100946 | None:intergenic | 40.0% | |
| TATTTGACGGTCTTGAGGAT+TGG | + | chr1.3:60100600-60100619 | MS.gene20991:CDS | 40.0% | |
| TCTAAGTGGTGCATCTGATA+TGG | - | chr1.3:60096619-60096638 | None:intergenic | 40.0% | |
| TGCAGAGAACAGTAGAAGTT+TGG | + | chr1.3:60101028-60101047 | MS.gene20991:intron | 40.0% | |
| TGGAAAGAGGAAGATAGCTT+AGG | - | chr1.3:60099887-60099906 | None:intergenic | 40.0% | |
| TTCACTTACAATGCATGGCT+AGG | + | chr1.3:60100156-60100175 | MS.gene20991:intron | 40.0% | |
| TTCACTTATCCTGGAATCGA+CGG | + | chr1.3:60096023-60096042 | MS.gene20991:CDS | 40.0% | |
| TTCTCTCTCAATCTCTTCTC+CGG | + | chr1.3:60096083-60096102 | MS.gene20991:CDS | 40.0% | |
| ! | ACATATGGTGGAACCTGAAA+TGG | + | chr1.3:60096269-60096288 | MS.gene20991:CDS | 40.0% |
| ! | AGGGAAAACTTGGAGTGTTT+AGG | + | chr1.3:60098030-60098049 | MS.gene20991:intron | 40.0% |
| ! | CCGGTTCGAGTTACTAATAA+TGG | + | chr1.3:60101171-60101190 | MS.gene20991:CDS | 40.0% |
| ! | GGGAAAACTTGGAGTGTTTA+GGG | + | chr1.3:60098031-60098050 | MS.gene20991:intron | 40.0% |
| ! | GGTGATCTTTGTTATCTTGG+TGG | + | chr1.3:60096342-60096361 | MS.gene20991:CDS | 40.0% |
| ! | TAAGCTCAAACCGAGTTTTG+AGG | + | chr1.3:60101247-60101266 | MS.gene20991:CDS | 40.0% |
| ! | TAGGAGGAAGTTTTCTTCAC+CGG | - | chr1.3:60101229-60101248 | None:intergenic | 40.0% |
| ! | TCAAAACTCGGTTTGAGCTT+AGG | - | chr1.3:60101248-60101267 | None:intergenic | 40.0% |
| ! | TTCATCGCACGGGTTAAATA+GGG | - | chr1.3:60096412-60096431 | None:intergenic | 40.0% |
| ! | TTTCATCGCACGGGTTAAAT+AGG | - | chr1.3:60096413-60096432 | None:intergenic | 40.0% |
| !! | AAGCTCAAACCGAGTTTTGA+GGG | + | chr1.3:60101248-60101267 | MS.gene20991:CDS | 40.0% |
| !! | AGGGCATAAGTGCATTGATT+AGG | - | chr1.3:60096393-60096412 | None:intergenic | 40.0% |
| !! | GCCATTTTCGTGCTTATAGT+TGG | + | chr1.3:60098856-60098875 | MS.gene20991:intron | 40.0% |
| !! | GGGCATAAGTGCATTGATTA+GGG | - | chr1.3:60096392-60096411 | None:intergenic | 40.0% |
| !! | TCTTTGTTATCTTGGTGGTG+AGG | + | chr1.3:60096347-60096366 | MS.gene20991:CDS | 40.0% |
| !!! | AGAAGAGATGTTGCTTTTGC+TGG | + | chr1.3:60099409-60099428 | MS.gene20991:CDS | 40.0% |
| ACGAGGTTACTGGTGATTGT+AGG | + | chr1.3:60099603-60099622 | MS.gene20991:intron | 45.0% | |
| AGAGAAATTACCAGCGCCAT+TGG | - | chr1.3:60096132-60096151 | None:intergenic | 45.0% | |
| AGGGCAAAGTAGGGTGAATT+AGG | + | chr1.3:60098639-60098658 | MS.gene20991:intron | 45.0% | |
| AGGGTGAATTAGGGCAAACA+TGG | + | chr1.3:60098346-60098365 | MS.gene20991:intron | 45.0% | |
| AGGTTGCTCATTCCTTTCCT+AGG | + | chr1.3:60100460-60100479 | MS.gene20991:intron | 45.0% | |
| AGTAGAAGTTTGGCTACGGA+AGG | + | chr1.3:60101038-60101057 | MS.gene20991:CDS | 45.0% | |
| ATAGCAAGGGAGGGAAAACT+TGG | + | chr1.3:60098020-60098039 | MS.gene20991:intron | 45.0% | |
| CAAGGAATGCAACACCAACA+TGG | + | chr1.3:60097664-60097683 | MS.gene20991:intron | 45.0% | |
| CAGCTCTTGCTAGAACATCA+AGG | - | chr1.3:60100514-60100533 | None:intergenic | 45.0% | |
| CCAAGAACACGAACCATTTC+AGG | - | chr1.3:60096285-60096304 | None:intergenic | 45.0% | |
| CCAGAAGAAGAACCTAGGAA+AGG | - | chr1.3:60100475-60100494 | None:intergenic | 45.0% | |
| CCTGAAATGGTTCGTGTTCT+TGG | + | chr1.3:60096282-60096301 | MS.gene20991:CDS | 45.0% | |
| CCTTTCCTAGGTTCTTCTTC+TGG | + | chr1.3:60100472-60100491 | MS.gene20991:intron | 45.0% | |
| CTAGGGATTAGGGCAAAGTA+GGG | + | chr1.3:60098630-60098649 | MS.gene20991:intron | 45.0% | |
| CTCATCCAGAAGAAGAACCT+AGG | - | chr1.3:60100480-60100499 | None:intergenic | 45.0% | |
| GGGCAAAGTAGGGTGAATTA+GGG | + | chr1.3:60098640-60098659 | MS.gene20991:intron | 45.0% | |
| GGGTCTCCTCAAACCATTTA+AGG | + | chr1.3:60100340-60100359 | MS.gene20991:CDS | 45.0% | |
| TCAATCTCTTCTCCGGTGAT+CGG | + | chr1.3:60096090-60096109 | MS.gene20991:CDS | 45.0% | |
| TGATATGATCGTCAGCCGTT+TGG | + | chr1.3:60098891-60098910 | MS.gene20991:intron | 45.0% | |
| TTATGTTGCTCATGGAAGGC+TGG | + | chr1.3:60100740-60100759 | MS.gene20991:CDS | 45.0% | |
| TTCATGTCAGACGAGGTTAC+TGG | + | chr1.3:60099593-60099612 | MS.gene20991:intron | 45.0% | |
| ! | AAACTCGGTTTGAGCTTAGG+AGG | - | chr1.3:60101245-60101264 | None:intergenic | 45.0% |
| ! | AAATGCTAGCTTGACCCGTA+GGG | + | chr1.3:60098056-60098075 | MS.gene20991:intron | 45.0% |
| ! | AGATCTGGGCTTGTTTGGAT+TGG | - | chr1.3:60099108-60099127 | None:intergenic | 45.0% |
| ! | GAAACAGATCTGGGCTTGTT+TGG | - | chr1.3:60099113-60099132 | None:intergenic | 45.0% |
| ! | GAAGTTTTCTTCACCGGCAA+TGG | - | chr1.3:60101223-60101242 | None:intergenic | 45.0% |
| ! | TAAATGCTAGCTTGACCCGT+AGG | + | chr1.3:60098055-60098074 | MS.gene20991:intron | 45.0% |
| ! | TCAATTAGCGGTTTGGAACC+CGG | - | chr1.3:60096059-60096078 | None:intergenic | 45.0% |
| !! | AGGTTCTGAAAAGGGTACAC+AGG | + | chr1.3:60100176-60100195 | MS.gene20991:intron | 45.0% |
| !! | ATTAGCTCTGCTCTTCTTGC+AGG | - | chr1.3:60099502-60099521 | None:intergenic | 45.0% |
| !! | GCATGGCTAGGTTCTGAAAA+GGG | + | chr1.3:60100168-60100187 | MS.gene20991:intron | 45.0% |
| !! | TGCATGGCTAGGTTCTGAAA+AGG | + | chr1.3:60100167-60100186 | MS.gene20991:intron | 45.0% |
| !! | TGTTATCTTGGTGGTGAGGT+TGG | + | chr1.3:60096351-60096370 | MS.gene20991:intron | 45.0% |
| !!! | AGCTCAAACCGAGTTTTGAG+GGG | + | chr1.3:60101249-60101268 | MS.gene20991:CDS | 45.0% |
| !!! | TTTTTTAATTAAGATAATAA+GGG | - | chr1.3:60099194-60099213 | None:intergenic | 5.0% |
| !!! | TTTTTTTAATTAAGATAATA+AGG | - | chr1.3:60099195-60099214 | None:intergenic | 5.0% |
| AGCTCGTGAGGAAACAGATC+TGG | - | chr1.3:60099123-60099142 | None:intergenic | 50.0% | |
| AGGAAAGAAAGGAAGGCTGC+TGG | + | chr1.3:60101084-60101103 | MS.gene20991:CDS | 50.0% | |
| ATCCCATAACAACCCCCTAC+GGG | - | chr1.3:60098073-60098092 | None:intergenic | 50.0% | |
| ATGGAAGCCGTGTAGTTGGA+GGG | + | chr1.3:60101133-60101152 | MS.gene20991:CDS | 50.0% | |
| CGGTTACATTCCACCATTGC+CGG | + | chr1.3:60101207-60101226 | MS.gene20991:CDS | 50.0% | |
| GATCCCATAACAACCCCCTA+CGG | - | chr1.3:60098074-60098093 | None:intergenic | 50.0% | |
| GCTAGGGATTAGGGCAAAGT+AGG | + | chr1.3:60098629-60098648 | MS.gene20991:intron | 50.0% | |
| GCTCGTGAGGAAACAGATCT+GGG | - | chr1.3:60099122-60099141 | None:intergenic | 50.0% | |
| GGGGGTTGTTATGGGATCTA+CGG | + | chr1.3:60098076-60098095 | MS.gene20991:intron | 50.0% | |
| GTATTCAAGGTTACCCGTCG+AGG | - | chr1.3:60100888-60100907 | None:intergenic | 50.0% | |
| TAATTATGCGCGCTCCTCGA+CGG | + | chr1.3:60100871-60100890 | MS.gene20991:intron | 50.0% | |
| TGCCTTCTCGTTGGATCCAA+TGG | + | chr1.3:60096113-60096132 | MS.gene20991:CDS | 50.0% | |
| ! | AATGCTAGCTTGACCCGTAG+GGG | + | chr1.3:60098057-60098076 | MS.gene20991:intron | 50.0% |
| ! | GTTGATGGAAGCCGTGTAGT+TGG | + | chr1.3:60101129-60101148 | MS.gene20991:CDS | 50.0% |
| ! | GTTTTCTTCACCGGCAATGG+TGG | - | chr1.3:60101220-60101239 | None:intergenic | 50.0% |
| !!! | GCTCAAACCGAGTTTTGAGG+GGG | + | chr1.3:60101250-60101269 | MS.gene20991:CDS | 50.0% |
| !!! | TTTTTTGGGATGGGGCACAG+TGG | + | chr1.3:60099386-60099405 | MS.gene20991:intron | 50.0% |
| AATTATGCGCGCTCCTCGAC+GGG | + | chr1.3:60100872-60100891 | MS.gene20991:intron | 55.0% | |
| ACTAATAATGGCTGGGCCGC+AGG | + | chr1.3:60101183-60101202 | MS.gene20991:CDS | 55.0% | |
| ATCTACGGCTGAGACGTAGG+GGG | + | chr1.3:60098091-60098110 | MS.gene20991:intron | 55.0% | |
| CAGGATCCCCTCCAACTACA+CGG | - | chr1.3:60101143-60101162 | None:intergenic | 55.0% | |
| CGCCATTGGATCCAACGAGA+AGG | - | chr1.3:60096118-60096137 | None:intergenic | 55.0% | |
| GACCCGTAGGGGGTTGTTAT+GGG | + | chr1.3:60098068-60098087 | MS.gene20991:intron | 55.0% | |
| GATCTACGGCTGAGACGTAG+GGG | + | chr1.3:60098090-60098109 | MS.gene20991:intron | 55.0% | |
| GATGGAAGCCGTGTAGTTGG+AGG | + | chr1.3:60101132-60101151 | MS.gene20991:CDS | 55.0% | |
| GGATCTACGGCTGAGACGTA+GGG | + | chr1.3:60098089-60098108 | MS.gene20991:intron | 55.0% | |
| GGTGGAATGTAACCGACCTG+CGG | - | chr1.3:60101202-60101221 | None:intergenic | 55.0% | |
| TGACCCGTAGGGGGTTGTTA+TGG | + | chr1.3:60098067-60098086 | MS.gene20991:intron | 55.0% | |
| TGGAAGCCGTGTAGTTGGAG+GGG | + | chr1.3:60101134-60101153 | MS.gene20991:CDS | 55.0% | |
| ! | ATGCTAGCTTGACCCGTAGG+GGG | + | chr1.3:60098058-60098077 | MS.gene20991:intron | 55.0% |
| ! | ATTAGCGGTTTGGAACCCGG+CGG | - | chr1.3:60096056-60096075 | None:intergenic | 55.0% |
| !! | AACGAGAAGGCACCGATCAC+CGG | - | chr1.3:60096105-60096124 | None:intergenic | 55.0% |
| AATCGACGGTCATCCTCCGC+CGG | + | chr1.3:60096037-60096056 | MS.gene20991:CDS | 60.0% | |
| ATAATGGCTGGGCCGCAGGT+CGG | + | chr1.3:60101187-60101206 | MS.gene20991:CDS | 60.0% | |
| CTCGTTGGATCCAATGGCGC+TGG | + | chr1.3:60096119-60096138 | MS.gene20991:CDS | 60.0% | |
| GGGATCTACGGCTGAGACGT+AGG | + | chr1.3:60098088-60098107 | MS.gene20991:intron | 60.0% | |
| ! | GGTGATCGGTGCCTTCTCGT+TGG | + | chr1.3:60096104-60096123 | MS.gene20991:CDS | 60.0% |
| !! | GGAGGATGACCGTCGATTCC+AGG | - | chr1.3:60096035-60096054 | None:intergenic | 60.0% |
| ACTCGAACCGGAGCTCGTGC+AGG | - | chr1.3:60101162-60101181 | None:intergenic | 65.0% | |
| AGGGGATCCTGCACGAGCTC+CGG | + | chr1.3:60101152-60101171 | MS.gene20991:CDS | 65.0% | |
| ATCGACGGTCATCCTCCGCC+GGG | + | chr1.3:60096038-60096057 | MS.gene20991:CDS | 65.0% | |
| ! | AGCGGTTTGGAACCCGGCGG+AGG | - | chr1.3:60096053-60096072 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 60095963 | 60101275 | 60095963 | ID=MS.gene20991 |
| chr1.3 | mRNA | 60095963 | 60101275 | 60095963 | ID=MS.gene20991.t1;Parent=MS.gene20991 |
| chr1.3 | exon | 60095963 | 60096140 | 60095963 | ID=MS.gene20991.t1.exon1;Parent=MS.gene20991.t1 |
| chr1.3 | CDS | 60095963 | 60096140 | 60095963 | ID=cds.MS.gene20991.t1;Parent=MS.gene20991.t1 |
| chr1.3 | exon | 60096235 | 60096368 | 60096235 | ID=MS.gene20991.t1.exon2;Parent=MS.gene20991.t1 |
| chr1.3 | CDS | 60096235 | 60096368 | 60096235 | ID=cds.MS.gene20991.t1;Parent=MS.gene20991.t1 |
| chr1.3 | exon | 60099406 | 60099525 | 60099406 | ID=MS.gene20991.t1.exon3;Parent=MS.gene20991.t1 |
| chr1.3 | CDS | 60099406 | 60099525 | 60099406 | ID=cds.MS.gene20991.t1;Parent=MS.gene20991.t1 |
| chr1.3 | exon | 60100266 | 60100361 | 60100266 | ID=MS.gene20991.t1.exon4;Parent=MS.gene20991.t1 |
| chr1.3 | CDS | 60100266 | 60100361 | 60100266 | ID=cds.MS.gene20991.t1;Parent=MS.gene20991.t1 |
| chr1.3 | exon | 60100482 | 60100634 | 60100482 | ID=MS.gene20991.t1.exon5;Parent=MS.gene20991.t1 |
| chr1.3 | CDS | 60100482 | 60100634 | 60100482 | ID=cds.MS.gene20991.t1;Parent=MS.gene20991.t1 |
| chr1.3 | exon | 60100738 | 60100815 | 60100738 | ID=MS.gene20991.t1.exon6;Parent=MS.gene20991.t1 |
| chr1.3 | CDS | 60100738 | 60100815 | 60100738 | ID=cds.MS.gene20991.t1;Parent=MS.gene20991.t1 |
| chr1.3 | exon | 60101033 | 60101275 | 60101033 | ID=MS.gene20991.t1.exon7;Parent=MS.gene20991.t1 |
| chr1.3 | CDS | 60101033 | 60101275 | 60101033 | ID=cds.MS.gene20991.t1;Parent=MS.gene20991.t1 |
| Gene Sequence |
| Protein sequence |
