Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21377.t1 | XP_003591668.1 | 93.8 | 371 | 17 | 2 | 1 | 367 | 1 | 369 | 3.60E-193 | 684.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21377.t1 | Q9FLE8 | 43.4 | 166 | 74 | 3 | 221 | 366 | 223 | 388 | 9.6e-30 | 132.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21377.t1 | G7I314 | 93.8 | 371 | 17 | 2 | 1 | 367 | 1 | 369 | 2.6e-193 | 684.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050214 | MS.gene21377 | 0.840486 | 8.45E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21377.t1 | MTR_1g090400 | 93.521 | 355 | 17 | 2 | 17 | 367 | 17 | 369 | 0.0 | 652 |
| MS.gene21377.t1 | MTR_7g106500 | 40.000 | 280 | 119 | 7 | 117 | 366 | 18 | 278 | 1.75e-56 | 186 |
| MS.gene21377.t1 | MTR_7g104720 | 43.627 | 204 | 109 | 4 | 165 | 366 | 205 | 404 | 1.86e-47 | 166 |
| MS.gene21377.t1 | MTR_5g083110 | 49.333 | 150 | 74 | 2 | 218 | 366 | 90 | 238 | 5.54e-44 | 152 |
| MS.gene21377.t1 | MTR_8g099665 | 42.938 | 177 | 92 | 3 | 199 | 366 | 191 | 367 | 9.90e-42 | 150 |
| MS.gene21377.t1 | MTR_1g051180 | 44.099 | 161 | 79 | 2 | 217 | 366 | 203 | 363 | 2.98e-40 | 146 |
| MS.gene21377.t1 | MTR_3g017490 | 45.638 | 149 | 79 | 2 | 221 | 367 | 113 | 261 | 1.15e-38 | 139 |
| MS.gene21377.t1 | MTR_8g106900 | 45.963 | 161 | 80 | 3 | 213 | 366 | 113 | 273 | 1.30e-37 | 136 |
| MS.gene21377.t1 | MTR_8g038440 | 44.737 | 152 | 79 | 2 | 220 | 366 | 103 | 254 | 1.98e-37 | 135 |
| MS.gene21377.t1 | MTR_7g090230 | 42.384 | 151 | 84 | 2 | 219 | 366 | 274 | 424 | 1.58e-35 | 134 |
| MS.gene21377.t1 | MTR_5g072400 | 44.295 | 149 | 81 | 2 | 219 | 366 | 106 | 253 | 3.56e-35 | 130 |
| MS.gene21377.t1 | MTR_3g465550 | 44.138 | 145 | 78 | 2 | 219 | 361 | 84 | 227 | 8.92e-35 | 128 |
| MS.gene21377.t1 | MTR_3g071510 | 40.690 | 145 | 84 | 2 | 223 | 366 | 91 | 234 | 1.33e-33 | 125 |
| MS.gene21377.t1 | MTR_7g010090 | 38.288 | 222 | 106 | 6 | 166 | 366 | 220 | 431 | 3.07e-31 | 123 |
| MS.gene21377.t1 | MTR_6g011640 | 34.375 | 224 | 109 | 7 | 167 | 366 | 187 | 396 | 4.83e-28 | 113 |
| MS.gene21377.t1 | MTR_3g030520 | 37.580 | 157 | 78 | 4 | 230 | 366 | 142 | 298 | 3.61e-21 | 92.8 |
| MS.gene21377.t1 | MTR_7g079015 | 37.500 | 104 | 55 | 3 | 263 | 356 | 1 | 104 | 5.07e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21377.t1 | AT5G01420 | 39.773 | 440 | 151 | 16 | 1 | 366 | 1 | 400 | 6.17e-76 | 240 |
| MS.gene21377.t1 | AT5G06470 | 50.617 | 162 | 70 | 2 | 213 | 366 | 79 | 238 | 2.79e-56 | 184 |
| MS.gene21377.t1 | AT5G03870 | 36.111 | 324 | 165 | 8 | 72 | 366 | 73 | 383 | 8.61e-50 | 172 |
| MS.gene21377.t1 | AT4G10630 | 47.619 | 168 | 74 | 3 | 213 | 366 | 166 | 333 | 6.92e-48 | 165 |
| MS.gene21377.t1 | AT3G11773 | 52.817 | 142 | 66 | 1 | 225 | 366 | 9 | 149 | 3.02e-47 | 157 |
| MS.gene21377.t1 | AT1G64500 | 43.195 | 169 | 86 | 3 | 208 | 366 | 197 | 365 | 5.79e-41 | 148 |
| MS.gene21377.t1 | AT5G58530 | 44.025 | 159 | 78 | 3 | 219 | 367 | 109 | 266 | 1.87e-36 | 133 |
| MS.gene21377.t1 | AT5G13810 | 44.000 | 150 | 82 | 2 | 219 | 366 | 123 | 272 | 8.45e-36 | 132 |
| MS.gene21377.t1 | AT3G11773 | 42.038 | 157 | 67 | 2 | 210 | 366 | 67 | 199 | 2.43e-33 | 123 |
| MS.gene21377.t1 | AT3G57070 | 42.105 | 152 | 84 | 2 | 219 | 366 | 264 | 415 | 5.03e-33 | 127 |
| MS.gene21377.t1 | AT2G41330 | 45.517 | 145 | 76 | 2 | 225 | 366 | 256 | 400 | 9.65e-33 | 126 |
| MS.gene21377.t1 | AT5G39865 | 43.373 | 166 | 74 | 3 | 221 | 366 | 223 | 388 | 1.02e-31 | 123 |
| MS.gene21377.t1 | AT1G32760 | 44.118 | 170 | 85 | 4 | 207 | 366 | 144 | 313 | 1.02e-31 | 122 |
| MS.gene21377.t1 | AT3G28850 | 41.573 | 178 | 72 | 5 | 221 | 366 | 249 | 426 | 2.74e-28 | 114 |
Find 61 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATGCTTGTGGCGGTTTA+AGG | 0.163412 | 1.4:+71634212 | MS.gene21377:CDS |
| TCTGATACATCAATAATTTC+TGG | 0.214591 | 1.4:-71633461 | None:intergenic |
| TAATGGTAGCCATAAGATTT+TGG | 0.260789 | 1.4:+71634255 | MS.gene21377:CDS |
| GAGCTAATACTGATAGAAAA+AGG | 0.313758 | 1.4:+71633654 | MS.gene21377:CDS |
| ATCAATGCACAAGGAGTATA+AGG | 0.319818 | 1.4:+71634030 | MS.gene21377:CDS |
| TTCTACACAACATCGCTTAG+AGG | 0.320109 | 1.4:+71633926 | MS.gene21377:CDS |
| GGATGAATTGTGGAGTCTTT+TGG | 0.323766 | 1.4:+71634051 | MS.gene21377:CDS |
| TTCTCCATCTAGCCACAATA+TGG | 0.324101 | 1.4:-71634337 | None:intergenic |
| GTTCCAATGGATTGTTCTAA+TGG | 0.327957 | 1.4:+71634184 | MS.gene21377:CDS |
| AAATGAAGAAGAAATGGATT+TGG | 0.348854 | 1.4:+71633505 | MS.gene21377:CDS |
| GTTGTTTCAGTTTCGAAGAT+TGG | 0.349123 | 1.4:+71633563 | MS.gene21377:CDS |
| CGGAGACCGGATTTGAATTC+CGG | 0.349959 | 1.4:+71633713 | MS.gene21377:CDS |
| TGAAGAAAATGAAGAAGAAA+TGG | 0.363113 | 1.4:+71633499 | MS.gene21377:CDS |
| TCGAACGCAGCGAGCAGTTT+CGG | 0.363214 | 1.4:-71633749 | None:intergenic |
| CTTCAGGTAAAATCCATTGA+TGG | 0.400661 | 1.4:+71633326 | MS.gene21377:CDS |
| AATGCCAGATCGAATTCTTC+AGG | 0.401446 | 1.4:+71633310 | MS.gene21377:CDS |
| AGAGTGATAGTTTGTCGTTC+CGG | 0.410128 | 1.4:+71633693 | MS.gene21377:CDS |
| GAAAAGTTGCGAGAATTTGC+AGG | 0.413679 | 1.4:+71633424 | MS.gene21377:CDS |
| TTTGTTAAGGGAAGATATAT+AGG | 0.419790 | 1.4:+71634100 | MS.gene21377:CDS |
| ATATTGAAAGATGAAATCTT+TGG | 0.423944 | 1.4:-71633365 | None:intergenic |
| GTTTCTTCTACTAAGTTTCA+AGG | 0.432155 | 1.4:+71633985 | MS.gene21377:CDS |
| TCTCGAGCAACAAACGGGTT+GGG | 0.436933 | 1.4:-71633389 | None:intergenic |
| AGAAGTTGAAGTTGACCCTT+TGG | 0.437150 | 1.4:+71633856 | MS.gene21377:CDS |
| TTTCTATCAGTATTAGCTCT+TGG | 0.445564 | 1.4:-71633650 | None:intergenic |
| GAAACTGCTCGCTGCGTTCG+AGG | 0.455728 | 1.4:+71633751 | MS.gene21377:CDS |
| GAAGCTCAAATCAATCAAAC+AGG | 0.457778 | 1.4:+71633277 | MS.gene21377:CDS |
| TAGTTTGTCGTTCCGGAGAC+CGG | 0.460484 | 1.4:+71633700 | MS.gene21377:CDS |
| TTCTCGAGCAACAAACGGGT+TGG | 0.470007 | 1.4:-71633390 | None:intergenic |
| TTTACCTGAAGAATTCGATC+TGG | 0.482511 | 1.4:-71633314 | None:intergenic |
| TGTTTGTTGTGTAATGAGAA+TGG | 0.484610 | 1.4:+71634301 | MS.gene21377:CDS |
| ACATCAATAATTTCTGGTTG+TGG | 0.492063 | 1.4:-71633455 | None:intergenic |
| AAAATCTGCATACCCATCAA+TGG | 0.498345 | 1.4:-71633339 | None:intergenic |
| AAGCTACCGGAATTCAAATC+CGG | 0.506585 | 1.4:-71633719 | None:intergenic |
| GTGTAATGAGAATGGATTGA+TGG | 0.517662 | 1.4:+71634309 | MS.gene21377:CDS |
| CGGAATTCAAATCCGGTCTC+CGG | 0.526856 | 1.4:-71633712 | None:intergenic |
| TTCAGGTAAAATCCATTGAT+GGG | 0.528869 | 1.4:+71633327 | MS.gene21377:CDS |
| AAACTATCACTCTCAGAAAG+AGG | 0.531340 | 1.4:-71633683 | None:intergenic |
| GTGAGAAAGTTGTGCCTCCA+AGG | 0.543640 | 1.4:+71634074 | MS.gene21377:CDS |
| TGCGTTCGAGGAAGCTGTGA+AGG | 0.544838 | 1.4:+71633763 | MS.gene21377:CDS |
| TCTCTTCAAATAACGCCAAA+GGG | 0.545226 | 1.4:-71633871 | None:intergenic |
| AAGTGTCCACCAGGTGGTGA+TGG | 0.545637 | 1.4:+71633893 | MS.gene21377:CDS |
| TTCTCTTCAAATAACGCCAA+AGG | 0.551664 | 1.4:-71633872 | None:intergenic |
| TTTCGGATCAAATAAGCTAC+CGG | 0.582175 | 1.4:-71633732 | None:intergenic |
| GGTCCATTAGAACAATCCAT+TGG | 0.585251 | 1.4:-71634187 | None:intergenic |
| TTGATGGTGTGTCCATATTG+TGG | 0.585754 | 1.4:+71634325 | MS.gene21377:CDS |
| AAAGAGAATATTAGTCACAA+AGG | 0.597862 | 1.4:+71633539 | MS.gene21377:CDS |
| AATGGACCTTGTGATGCTTG+TGG | 0.604882 | 1.4:+71634202 | MS.gene21377:CDS |
| AACTATCACTCTCAGAAAGA+GGG | 0.607495 | 1.4:-71633682 | None:intergenic |
| ATCACAGTACCATCACCACC+TGG | 0.624770 | 1.4:-71633902 | None:intergenic |
| TTTGAAGAGAAGTGTCCACC+AGG | 0.629966 | 1.4:+71633884 | MS.gene21377:CDS |
| AGGAGTATAAGGATGAATTG+TGG | 0.635001 | 1.4:+71634041 | MS.gene21377:CDS |
| TTAGCTCTTGGTAACAGTGG+TGG | 0.637058 | 1.4:-71633638 | None:intergenic |
| AGTTGAGGAAGAGTTTACAA+AGG | 0.642245 | 1.4:+71633802 | MS.gene21377:CDS |
| GTATTAGCTCTTGGTAACAG+TGG | 0.650696 | 1.4:-71633641 | None:intergenic |
| GGACCTTGTGATGCTTGTGG+CGG | 0.679567 | 1.4:+71634205 | MS.gene21377:CDS |
| AAACCGCCACAAGCATCACA+AGG | 0.679920 | 1.4:-71634208 | None:intergenic |
| ACAGTACCATCACCACCTGG+TGG | 0.680584 | 1.4:-71633899 | None:intergenic |
| GAGGGATATATCAATGCACA+AGG | 0.680749 | 1.4:+71634021 | MS.gene21377:CDS |
| ACAGAGGCAAAACAGAGTTG+AGG | 0.682222 | 1.4:+71633787 | MS.gene21377:CDS |
| AGGAAGCTGTGAAGGAACAG+AGG | 0.685483 | 1.4:+71633771 | MS.gene21377:CDS |
| GAAGAGAAGTGTCCACCAGG+TGG | 0.706764 | 1.4:+71633887 | MS.gene21377:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGAAAGATGAAATCTT+TGG | - | chr1.4:71633368-71633387 | None:intergenic | 20.0% |
| !!! | AAGTTGAAGAAAATTTTTGA+AGG | + | chr1.4:71634160-71634179 | MS.gene21377:CDS | 20.0% |
| !!! | AGTTGAAGAAAATTTTTGAA+GGG | + | chr1.4:71634161-71634180 | MS.gene21377:CDS | 20.0% |
| ! | AAAGAGAATATTAGTCACAA+AGG | + | chr1.4:71633539-71633558 | MS.gene21377:CDS | 25.0% |
| ! | TCTGATACATCAATAATTTC+TGG | - | chr1.4:71633464-71633483 | None:intergenic | 25.0% |
| ! | TGAAGAAAATGAAGAAGAAA+TGG | + | chr1.4:71633499-71633518 | MS.gene21377:CDS | 25.0% |
| ! | TTTGTTAAGGGAAGATATAT+AGG | + | chr1.4:71634100-71634119 | MS.gene21377:CDS | 25.0% |
| !! | AAATGAAGAAGAAATGGATT+TGG | + | chr1.4:71633505-71633524 | MS.gene21377:CDS | 25.0% |
| !!! | GTTGAAGAAAATTTTTGAAG+GGG | + | chr1.4:71634162-71634181 | MS.gene21377:CDS | 25.0% |
| GAGCTAATACTGATAGAAAA+AGG | + | chr1.4:71633654-71633673 | MS.gene21377:CDS | 30.0% | |
| GTTTCTTCTACTAAGTTTCA+AGG | + | chr1.4:71633985-71634004 | MS.gene21377:CDS | 30.0% | |
| TTCAGGTAAAATCCATTGAT+GGG | + | chr1.4:71633327-71633346 | MS.gene21377:CDS | 30.0% | |
| ! | TAATGGTAGCCATAAGATTT+TGG | + | chr1.4:71634255-71634274 | MS.gene21377:CDS | 30.0% |
| ! | TTTCTATCAGTATTAGCTCT+TGG | - | chr1.4:71633653-71633672 | None:intergenic | 30.0% |
| !! | ACATCAATAATTTCTGGTTG+TGG | - | chr1.4:71633458-71633477 | None:intergenic | 30.0% |
| !! | GTGATGTGTTTTAAGTGTAA+TGG | + | chr1.4:71634238-71634257 | MS.gene21377:CDS | 30.0% |
| !! | TGTTTGTTGTGTAATGAGAA+TGG | + | chr1.4:71634301-71634320 | MS.gene21377:CDS | 30.0% |
| !!! | GTAGAAGAAACCGAATTTTT+TGG | - | chr1.4:71633976-71633995 | None:intergenic | 30.0% |
| AAAATCTGCATACCCATCAA+TGG | - | chr1.4:71633342-71633361 | None:intergenic | 35.0% | |
| AAACTATCACTCTCAGAAAG+AGG | - | chr1.4:71633686-71633705 | None:intergenic | 35.0% | |
| AACTATCACTCTCAGAAAGA+GGG | - | chr1.4:71633685-71633704 | None:intergenic | 35.0% | |
| AGTTGAGGAAGAGTTTACAA+AGG | + | chr1.4:71633802-71633821 | MS.gene21377:CDS | 35.0% | |
| CTTCAGGTAAAATCCATTGA+TGG | + | chr1.4:71633326-71633345 | MS.gene21377:CDS | 35.0% | |
| GAAGCTCAAATCAATCAAAC+AGG | + | chr1.4:71633277-71633296 | MS.gene21377:CDS | 35.0% | |
| TCGAAGACTGCCAAAAAATT+CGG | + | chr1.4:71633963-71633982 | MS.gene21377:CDS | 35.0% | |
| TCTCTTCAAATAACGCCAAA+GGG | - | chr1.4:71633874-71633893 | None:intergenic | 35.0% | |
| TTCTCTTCAAATAACGCCAA+AGG | - | chr1.4:71633875-71633894 | None:intergenic | 35.0% | |
| TTTACCTGAAGAATTCGATC+TGG | - | chr1.4:71633317-71633336 | None:intergenic | 35.0% | |
| TTTCGGATCAAATAAGCTAC+CGG | - | chr1.4:71633735-71633754 | None:intergenic | 35.0% | |
| ! | AGGAGTATAAGGATGAATTG+TGG | + | chr1.4:71634041-71634060 | MS.gene21377:CDS | 35.0% |
| ! | ATCAATGCACAAGGAGTATA+AGG | + | chr1.4:71634030-71634049 | MS.gene21377:CDS | 35.0% |
| ! | CAAATTCTCGCAACTTTTCT+TGG | - | chr1.4:71633423-71633442 | None:intergenic | 35.0% |
| ! | CCTTTTCTGCCAAAATCTTA+TGG | - | chr1.4:71634267-71634286 | None:intergenic | 35.0% |
| ! | GATGAATTGTGGAGTCTTTT+GGG | + | chr1.4:71634052-71634071 | MS.gene21377:CDS | 35.0% |
| ! | GTTGTTTCAGTTTCGAAGAT+TGG | + | chr1.4:71633563-71633582 | MS.gene21377:CDS | 35.0% |
| ! | TCATTTTCTCGAGCAACAAA+CGG | - | chr1.4:71633398-71633417 | None:intergenic | 35.0% |
| !! | AATTTTTGAAGGGGTTCCAA+TGG | + | chr1.4:71634171-71634190 | MS.gene21377:CDS | 35.0% |
| !! | CAAGGTTTTGTATCTTGAGA+GGG | + | chr1.4:71634003-71634022 | MS.gene21377:CDS | 35.0% |
| !! | CCATAAGATTTTGGCAGAAA+AGG | + | chr1.4:71634264-71634283 | MS.gene21377:CDS | 35.0% |
| !! | GTGTAATGAGAATGGATTGA+TGG | + | chr1.4:71634309-71634328 | MS.gene21377:CDS | 35.0% |
| !! | GTTCCAATGGATTGTTCTAA+TGG | + | chr1.4:71634184-71634203 | MS.gene21377:CDS | 35.0% |
| !! | TCAAGGTTTTGTATCTTGAG+AGG | + | chr1.4:71634002-71634021 | MS.gene21377:CDS | 35.0% |
| !!! | GTTTTGAGTTTGCATGAACA+AGG | + | chr1.4:71634136-71634155 | MS.gene21377:CDS | 35.0% |
| AAGCTACCGGAATTCAAATC+CGG | - | chr1.4:71633722-71633741 | None:intergenic | 40.0% | |
| AATGCCAGATCGAATTCTTC+AGG | + | chr1.4:71633310-71633329 | MS.gene21377:CDS | 40.0% | |
| AGAAGTTGAAGTTGACCCTT+TGG | + | chr1.4:71633856-71633875 | MS.gene21377:CDS | 40.0% | |
| CTTCCCTTAACAAAAAGCCT+TGG | - | chr1.4:71634094-71634113 | None:intergenic | 40.0% | |
| GAAAAGTTGCGAGAATTTGC+AGG | + | chr1.4:71633424-71633443 | MS.gene21377:CDS | 40.0% | |
| GAGGGATATATCAATGCACA+AGG | + | chr1.4:71634021-71634040 | MS.gene21377:CDS | 40.0% | |
| GGTCCATTAGAACAATCCAT+TGG | - | chr1.4:71634190-71634209 | None:intergenic | 40.0% | |
| TTCTACACAACATCGCTTAG+AGG | + | chr1.4:71633926-71633945 | MS.gene21377:CDS | 40.0% | |
| ! | AGAGTGATAGTTTGTCGTTC+CGG | + | chr1.4:71633693-71633712 | MS.gene21377:CDS | 40.0% |
| ! | CATTTTCTCGAGCAACAAAC+GGG | - | chr1.4:71633397-71633416 | None:intergenic | 40.0% |
| ! | CCTCCAAGGCTTTTTGTTAA+GGG | + | chr1.4:71634088-71634107 | MS.gene21377:CDS | 40.0% |
| ! | GGATGAATTGTGGAGTCTTT+TGG | + | chr1.4:71634051-71634070 | MS.gene21377:CDS | 40.0% |
| ! | GTATTAGCTCTTGGTAACAG+TGG | - | chr1.4:71633644-71633663 | None:intergenic | 40.0% |
| !! | TTGATGGTGTGTCCATATTG+TGG | + | chr1.4:71634325-71634344 | MS.gene21377:CDS | 40.0% |
| AATGGACCTTGTGATGCTTG+TGG | + | chr1.4:71634202-71634221 | MS.gene21377:CDS | 45.0% | |
| ACAGAGGCAAAACAGAGTTG+AGG | + | chr1.4:71633787-71633806 | MS.gene21377:CDS | 45.0% | |
| CCCTTAACAAAAAGCCTTGG+AGG | - | chr1.4:71634091-71634110 | None:intergenic | 45.0% | |
| ! | GCCTCCAAGGCTTTTTGTTA+AGG | + | chr1.4:71634087-71634106 | MS.gene21377:CDS | 45.0% |
| ! | TTAGCTCTTGGTAACAGTGG+TGG | - | chr1.4:71633641-71633660 | None:intergenic | 45.0% |
| !! | TTTGAAGAGAAGTGTCCACC+AGG | + | chr1.4:71633884-71633903 | MS.gene21377:CDS | 45.0% |
| AAACCGCCACAAGCATCACA+AGG | - | chr1.4:71634211-71634230 | None:intergenic | 50.0% | |
| AGGAAGCTGTGAAGGAACAG+AGG | + | chr1.4:71633771-71633790 | MS.gene21377:CDS | 50.0% | |
| ATCACAGTACCATCACCACC+TGG | - | chr1.4:71633905-71633924 | None:intergenic | 50.0% | |
| CGGAATTCAAATCCGGTCTC+CGG | - | chr1.4:71633715-71633734 | None:intergenic | 50.0% | |
| CGGAGACCGGATTTGAATTC+CGG | + | chr1.4:71633713-71633732 | MS.gene21377:CDS | 50.0% | |
| GTGAGAAAGTTGTGCCTCCA+AGG | + | chr1.4:71634074-71634093 | MS.gene21377:CDS | 50.0% | |
| GTGATGCTTGTGGCGGTTTA+AGG | + | chr1.4:71634212-71634231 | MS.gene21377:CDS | 50.0% | |
| TTCTCGAGCAACAAACGGGT+TGG | - | chr1.4:71633393-71633412 | None:intergenic | 50.0% | |
| ! | TAGTTTGTCGTTCCGGAGAC+CGG | + | chr1.4:71633700-71633719 | MS.gene21377:CDS | 50.0% |
| ! | TCTCGAGCAACAAACGGGTT+GGG | - | chr1.4:71633392-71633411 | None:intergenic | 50.0% |
| AAGTGTCCACCAGGTGGTGA+TGG | + | chr1.4:71633893-71633912 | MS.gene21377:CDS | 55.0% | |
| ACAGTACCATCACCACCTGG+TGG | - | chr1.4:71633902-71633921 | None:intergenic | 55.0% | |
| GGACCTTGTGATGCTTGTGG+CGG | + | chr1.4:71634205-71634224 | MS.gene21377:CDS | 55.0% | |
| TCGAACGCAGCGAGCAGTTT+CGG | - | chr1.4:71633752-71633771 | None:intergenic | 55.0% | |
| TGCGTTCGAGGAAGCTGTGA+AGG | + | chr1.4:71633763-71633782 | MS.gene21377:CDS | 55.0% | |
| !! | GAAGAGAAGTGTCCACCAGG+TGG | + | chr1.4:71633887-71633906 | MS.gene21377:CDS | 55.0% |
| GAAACTGCTCGCTGCGTTCG+AGG | + | chr1.4:71633751-71633770 | MS.gene21377:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 71633248 | 71634351 | 71633248 | ID=MS.gene21377 |
| chr1.4 | mRNA | 71633248 | 71634351 | 71633248 | ID=MS.gene21377.t1;Parent=MS.gene21377 |
| chr1.4 | exon | 71633248 | 71634351 | 71633248 | ID=MS.gene21377.t1.exon1;Parent=MS.gene21377.t1 |
| chr1.4 | CDS | 71633248 | 71634351 | 71633248 | ID=cds.MS.gene21377.t1;Parent=MS.gene21377.t1 |
| Gene Sequence |
| Protein sequence |