Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21879.t1 | XP_003610864.1 | 95.2 | 606 | 26 | 3 | 5 | 608 | 3 | 607 | 0.00E+00 | 1233.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21879.t1 | G7K6I4 | 95.2 | 606 | 26 | 3 | 5 | 608 | 3 | 607 | 0.0e+00 | 1233.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058119 | MS.gene21879 | 0.869167 | 3.79E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21879.t1 | MTR_5g007860 | 94.901 | 608 | 28 | 3 | 3 | 608 | 1 | 607 | 0.0 | 1187 |
| MS.gene21879.t1 | MTR_4g077620 | 67.301 | 578 | 179 | 7 | 32 | 608 | 1 | 569 | 0.0 | 789 |
| MS.gene21879.t1 | MTR_1g080370 | 57.455 | 550 | 222 | 4 | 58 | 606 | 20 | 558 | 0.0 | 666 |
| MS.gene21879.t1 | MTR_1g080410 | 57.455 | 550 | 222 | 4 | 58 | 606 | 20 | 558 | 0.0 | 666 |
| MS.gene21879.t1 | MTR_2g067640 | 47.387 | 555 | 261 | 8 | 55 | 606 | 14 | 540 | 1.56e-174 | 506 |
| MS.gene21879.t1 | MTR_2g062430 | 46.364 | 550 | 267 | 9 | 60 | 606 | 28 | 552 | 2.23e-170 | 496 |
| MS.gene21879.t1 | MTR_2g062410 | 44.946 | 554 | 274 | 9 | 60 | 606 | 56 | 585 | 1.59e-163 | 480 |
| MS.gene21879.t1 | MTR_2g062370 | 43.494 | 561 | 282 | 9 | 57 | 606 | 53 | 589 | 1.49e-157 | 464 |
| MS.gene21879.t1 | MTR_4g131710 | 43.009 | 565 | 289 | 10 | 53 | 606 | 43 | 585 | 2.35e-154 | 456 |
| MS.gene21879.t1 | MTR_2g062380 | 43.670 | 545 | 271 | 10 | 73 | 606 | 40 | 559 | 1.86e-152 | 451 |
| MS.gene21879.t1 | MTR_2g062340 | 43.182 | 572 | 264 | 11 | 42 | 607 | 1 | 517 | 4.32e-151 | 446 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21879.t1 | AT5G43950 | 57.739 | 575 | 226 | 6 | 39 | 608 | 4 | 566 | 0.0 | 669 |
| MS.gene21879.t1 | AT1G04090 | 57.194 | 556 | 227 | 6 | 58 | 607 | 21 | 571 | 0.0 | 660 |
| MS.gene21879.t1 | AT3G04350 | 54.878 | 574 | 241 | 5 | 39 | 606 | 4 | 565 | 0.0 | 649 |
| MS.gene21879.t1 | AT5G18490 | 55.070 | 572 | 230 | 8 | 39 | 606 | 3 | 551 | 0.0 | 646 |
| MS.gene21879.t1 | AT3G04350 | 55.741 | 540 | 221 | 5 | 73 | 606 | 16 | 543 | 0.0 | 624 |
| MS.gene21879.t1 | AT2G44230 | 45.242 | 557 | 271 | 9 | 55 | 606 | 14 | 541 | 1.25e-162 | 476 |
| MS.gene21879.t1 | AT2G44260 | 44.118 | 578 | 284 | 12 | 40 | 606 | 3 | 552 | 1.51e-160 | 471 |
| MS.gene21879.t1 | AT2G44260 | 44.917 | 541 | 264 | 10 | 72 | 606 | 70 | 582 | 1.07e-155 | 460 |
| MS.gene21879.t1 | AT3G01870 | 42.707 | 569 | 272 | 12 | 55 | 606 | 52 | 583 | 2.08e-142 | 426 |
| MS.gene21879.t1 | AT3G01880 | 41.958 | 572 | 278 | 13 | 55 | 608 | 56 | 591 | 9.33e-138 | 414 |
Find 147 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTCACGAATTTCCATTT+TGG | 0.139701 | 5.1:-2131641 | MS.gene21879:CDS |
| GAACAAATGATGGGGAATTT+TGG | 0.167237 | 5.1:-2131287 | MS.gene21879:CDS |
| AACCTAGCTACAAGCCTTTA+TGG | 0.169684 | 5.1:-2131977 | MS.gene21879:CDS |
| GGACCTTCTACTCTCAAATT+TGG | 0.175428 | 5.1:-2131123 | MS.gene21879:CDS |
| CAACTAATTTCATCTAAATT+AGG | 0.185035 | 5.1:+2131726 | None:intergenic |
| AATGAACTTCTAAGCCTTAA+AGG | 0.224297 | 5.1:+2130661 | None:intergenic |
| CACAGCACAGTGGTGGTAAA+TGG | 0.225044 | 5.1:-2130993 | MS.gene21879:CDS |
| TTGTACCGAAAGGGTGTTTC+TGG | 0.228534 | 5.1:-2131354 | MS.gene21879:CDS |
| ACTTGCCTTCTTCTGTTGAT+TGG | 0.274633 | 5.1:-2131398 | MS.gene21879:CDS |
| ATTTATCAAACACGGGGATT+TGG | 0.281262 | 5.1:-2131232 | MS.gene21879:CDS |
| CTCAAACTCCAAACCCAAAA+TGG | 0.284220 | 5.1:+2131627 | None:intergenic |
| GCTCTATAAGCGCATGTATT+TGG | 0.287269 | 5.1:+2131460 | None:intergenic |
| TTGATTCTGCTGCTTACTTT+TGG | 0.308078 | 5.1:-2131812 | MS.gene21879:CDS |
| CCCTGTGACCGTGGTATGTT+AGG | 0.309045 | 5.1:-2131603 | MS.gene21879:CDS |
| CCAAAGCTGGTAATTTGTTA+TGG | 0.310652 | 5.1:+2131901 | None:intergenic |
| ACGGTAAGGTTCACATTTAT+CGG | 0.312398 | 5.1:+2131686 | None:intergenic |
| CTAGTATGGTGCACTAATTC+AGG | 0.318499 | 5.1:-2131858 | MS.gene21879:CDS |
| TTCCAAATGATAAAAGTAGA+AGG | 0.333241 | 5.1:-2131257 | MS.gene21879:CDS |
| ACCTAGCTACAAGCCTTTAT+GGG | 0.339309 | 5.1:-2131976 | MS.gene21879:CDS |
| TCACAAAGTTTGAGACTGTT+TGG | 0.349310 | 5.1:-2132094 | MS.gene21879:CDS |
| CAAAACTTGGAATTGGTATC+AGG | 0.354205 | 5.1:-2130861 | MS.gene21879:CDS |
| ATTCCAAATTTGAGAGTAGA+AGG | 0.364392 | 5.1:+2131120 | None:intergenic |
| CCATAACAAATTACCAGCTT+TGG | 0.368639 | 5.1:-2131901 | MS.gene21879:CDS |
| TTAAGGCTTAGAAGTTCATT+TGG | 0.371438 | 5.1:-2130658 | MS.gene21879:CDS |
| CCAAGAGCCTTGTAACCTTC+AGG | 0.373592 | 5.1:+2131777 | None:intergenic |
| TTACAAGGCTCTTGGCTACT+TGG | 0.375921 | 5.1:-2131769 | MS.gene21879:CDS |
| CTCTTGATTATACACTAGTA+TGG | 0.389244 | 5.1:-2131872 | MS.gene21879:CDS |
| CCCGGTGGAGGAACAAATGA+TGG | 0.402458 | 5.1:-2131297 | MS.gene21879:CDS |
| TCTGAGGAACCAAGTGTTAC+GGG | 0.402750 | 5.1:-2133238 | MS.gene21879:CDS |
| CCCATCATTTGTTCCTCCAC+CGG | 0.404728 | 5.1:+2131296 | None:intergenic |
| CATGCGCTTATAGAGCATTA+TGG | 0.407024 | 5.1:-2131453 | MS.gene21879:CDS |
| GGATCGTCAAAACTTGGAAT+TGG | 0.408909 | 5.1:-2130868 | MS.gene21879:CDS |
| AAACACCCTTTCGGTACAAA+AGG | 0.418519 | 5.1:+2131358 | None:intergenic |
| CGCCTCCAGAAACACCCTTT+CGG | 0.419938 | 5.1:+2131349 | None:intergenic |
| AAGGTTCACATTTATCGGTT+AGG | 0.425276 | 5.1:+2131691 | None:intergenic |
| AGCAAAGTTGGTGAACATAT+AGG | 0.438872 | 5.1:-2131081 | MS.gene21879:CDS |
| TGCATTTGGAGCGAAGCATA+TGG | 0.440207 | 5.1:+2133175 | None:intergenic |
| TTGGTGAACATATAGGTGAT+TGG | 0.444018 | 5.1:-2131074 | MS.gene21879:CDS |
| ATGATCGGATGCATTGGGTT+TGG | 0.445916 | 5.1:+2133137 | None:intergenic |
| ATTGTTGCAGCTGAGTATTT+AGG | 0.446537 | 5.1:-2130787 | MS.gene21879:CDS |
| TACCGTACATTACTTGATGC+TGG | 0.447194 | 5.1:-2131669 | MS.gene21879:CDS |
| CCAGATGGATTTCACATCCT+TGG | 0.449720 | 5.1:-2132011 | MS.gene21879:CDS |
| TATGAATTAGAGTATATTGA+TGG | 0.450379 | 5.1:-2130961 | MS.gene21879:CDS |
| CCCTAACATACCACGGTCAC+AGG | 0.451878 | 5.1:+2131602 | None:intergenic |
| TTTACTGCAGTGGTTGTTGT+TGG | 0.452580 | 5.1:-2131557 | MS.gene21879:CDS |
| TATGGTGAGGAAGGTCCTAC+AGG | 0.453139 | 5.1:-2130604 | MS.gene21879:CDS |
| AAATTCTTCAAACACACAAC+AGG | 0.455952 | 5.1:+2131516 | None:intergenic |
| ATACAAGGATCGTCAAAACT+TGG | 0.457651 | 5.1:-2130874 | MS.gene21879:CDS |
| GCAAGTACAAAACCCCATAA+AGG | 0.458789 | 5.1:+2131963 | None:intergenic |
| GATCCTTGTATATAGGTTCC+AGG | 0.460143 | 5.1:+2130886 | None:intergenic |
| GTAACTTCACTGGAGAACTT+TGG | 0.460209 | 5.1:-2131029 | MS.gene21879:CDS |
| TGGTGAACATATAGGTGATT+GGG | 0.464800 | 5.1:-2131073 | MS.gene21879:CDS |
| TGTATATAGGTTCCAGGATG+AGG | 0.471629 | 5.1:+2130892 | None:intergenic |
| CCTTGAGGCCATTGAGGAAG+AGG | 0.473899 | 5.1:+2133075 | None:intergenic |
| ATCTGAGGAACCAAGTGTTA+CGG | 0.474973 | 5.1:-2133239 | MS.gene21879:CDS |
| ACAGCACAGTGGTGGTAAAT+GGG | 0.478438 | 5.1:-2130992 | MS.gene21879:CDS |
| GTTGCAGTATATGAGACAAT+GGG | 0.481252 | 5.1:-2130740 | MS.gene21879:CDS |
| ACCGTGGTATGTTAGGGAAA+GGG | 0.483580 | 5.1:-2131596 | MS.gene21879:CDS |
| GTTCATGTGAAACCAGCATT+TGG | 0.492138 | 5.1:-2131192 | MS.gene21879:CDS |
| GAAGGCAAGTAAATTTCCTC+TGG | 0.494221 | 5.1:+2131411 | None:intergenic |
| TCAACACTCCTCTTCCTCAA+TGG | 0.495707 | 5.1:-2133083 | MS.gene21879:CDS |
| GTGAAAGTTCCACCAAATGC+TGG | 0.501784 | 5.1:+2131180 | None:intergenic |
| CCATCATTTGTTCCTCCACC+GGG | 0.501856 | 5.1:+2131297 | None:intergenic |
| CCAAGGATGTGAAATCCATC+TGG | 0.503558 | 5.1:+2132011 | None:intergenic |
| GCTTCTGGAATTGTGAACCT+TGG | 0.503605 | 5.1:-2132137 | MS.gene21879:CDS |
| TCAAGAGGGTTCTCCAAAGC+TGG | 0.506894 | 5.1:+2131888 | None:intergenic |
| AAGTAAGCAGCAGAATCAAC+CGG | 0.508782 | 5.1:+2131816 | None:intergenic |
| CACGGCATTGCTGATAGCGT+TGG | 0.508920 | 5.1:+2131489 | None:intergenic |
| CTCATATACTGCAACCATTG+AGG | 0.510301 | 5.1:+2130748 | None:intergenic |
| CCTGAAGGTTACAAGGCTCT+TGG | 0.512936 | 5.1:-2131777 | MS.gene21879:CDS |
| TTAGGGAAAGGGGTTTCAGT+AGG | 0.513416 | 5.1:-2131585 | MS.gene21879:CDS |
| ATGATGATGATCGGATGCAT+TGG | 0.513727 | 5.1:+2133131 | None:intergenic |
| TGATGATGATCGGATGCATT+GGG | 0.516859 | 5.1:+2133132 | None:intergenic |
| TTGTAACCTTCAGGAGGTTG+AGG | 0.516986 | 5.1:+2131786 | None:intergenic |
| TCAACCTCCTGAAGGTTACA+AGG | 0.518511 | 5.1:-2131784 | MS.gene21879:CDS |
| CCGTGGTATGTTAGGGAAAG+GGG | 0.522778 | 5.1:-2131595 | MS.gene21879:CDS |
| CATCCTGGAACCTATATACA+AGG | 0.523885 | 5.1:-2130889 | MS.gene21879:CDS |
| GTTCCTCAGATTGATTAAAG+TGG | 0.527441 | 5.1:+2133251 | None:intergenic |
| CTTCGAATAAGTAACTTCAC+TGG | 0.528369 | 5.1:-2131039 | MS.gene21879:CDS |
| AAGCTTCCTGTGGAACTGTA+TGG | 0.531076 | 5.1:-2130622 | MS.gene21879:CDS |
| CCTCTTCCTCAATGGCCTCA+AGG | 0.531772 | 5.1:-2133075 | MS.gene21879:intron |
| GTTATACCTTGAGGCCATTG+AGG | 0.537258 | 5.1:+2133069 | None:intergenic |
| CCTGTGACCGTGGTATGTTA+GGG | 0.540441 | 5.1:-2131602 | MS.gene21879:CDS |
| TCCAAATGATAAAAGTAGAA+GGG | 0.543171 | 5.1:-2131256 | MS.gene21879:CDS |
| TAGGGAAAGGGGTTTCAGTA+GGG | 0.545626 | 5.1:-2131584 | MS.gene21879:CDS |
| TGGCTACCTCAACCTCCTGA+AGG | 0.547085 | 5.1:-2131792 | MS.gene21879:CDS |
| CATCTAAATTAGGCTTCTCA+CGG | 0.548648 | 5.1:+2131736 | None:intergenic |
| AATCCATCTGGTACTCCCAC+TGG | 0.548701 | 5.1:+2132023 | None:intergenic |
| GACCGTGGTATGTTAGGGAA+AGG | 0.549630 | 5.1:-2131597 | MS.gene21879:CDS |
| AACACCCTTTCGGTACAAAA+GGG | 0.549967 | 5.1:+2131359 | None:intergenic |
| CATGCAAGTTACCCTCATCC+TGG | 0.555899 | 5.1:-2130904 | MS.gene21879:CDS |
| TCCTCACCATACAGTTCCAC+AGG | 0.556027 | 5.1:+2130616 | None:intergenic |
| TCTGGATGAAAGAAAACAGT+AGG | 0.556534 | 5.1:+2131429 | None:intergenic |
| AGAGTAGAAGGTCCATTGAA+AGG | 0.557117 | 5.1:+2131132 | None:intergenic |
| ATGGTTGCTAATGTTATATG+AGG | 0.557837 | 5.1:+2131920 | None:intergenic |
| AAGAAAGAAAATCGCCATGC+CGG | 0.560298 | 5.1:-2131835 | MS.gene21879:CDS |
| TACCGAAAGGGTGTTTCTGG+AGG | 0.563977 | 5.1:-2131351 | MS.gene21879:CDS |
| TTCCAGCATCAAGTAATGTA+CGG | 0.564801 | 5.1:+2131667 | None:intergenic |
| CCCCATAAAGGCTTGTAGCT+AGG | 0.566011 | 5.1:+2131975 | None:intergenic |
| CATGTGAAACCAGCATTTGG+TGG | 0.567022 | 5.1:-2131189 | MS.gene21879:CDS |
| GCATCAAGTAATGTACGGTA+AGG | 0.567450 | 5.1:+2131672 | None:intergenic |
| TCGGATGCATTGGGTTTGGA+AGG | 0.573549 | 5.1:+2133141 | None:intergenic |
| GGTTGCAGTATATGAGACAA+TGG | 0.577104 | 5.1:-2130741 | MS.gene21879:CDS |
| CCGGTGGAGGAACAAATGAT+GGG | 0.577469 | 5.1:-2131296 | MS.gene21879:CDS |
| AGTAAAGAACCCGTAACACT+TGG | 0.579715 | 5.1:+2133229 | None:intergenic |
| GAAGGGAATTTATCAAACAC+GGG | 0.582141 | 5.1:-2131239 | MS.gene21879:CDS |
| CCTAGCTACAAGCCTTTATG+GGG | 0.589573 | 5.1:-2131975 | MS.gene21879:CDS |
| AAACCAGTGGGAGTACCAGA+TGG | 0.591413 | 5.1:-2132026 | MS.gene21879:CDS |
| GTATATAGGTTCCAGGATGA+GGG | 0.595393 | 5.1:+2130893 | None:intergenic |
| AGCGAAGCATATGGAAGAGA+AGG | 0.597525 | 5.1:+2133184 | None:intergenic |
| AGAAGGGAATTTATCAAACA+CGG | 0.598533 | 5.1:-2131240 | MS.gene21879:CDS |
| AAGAAGAAGATGATGATGAT+CGG | 0.599526 | 5.1:+2133122 | None:intergenic |
| CTTTCACAGACATTGTAATG+TGG | 0.602196 | 5.1:-2131164 | MS.gene21879:CDS |
| CATACTAGTGTATAATCAAG+AGG | 0.607012 | 5.1:+2131873 | None:intergenic |
| ACTGGATTGGAGATGAAAGA+TGG | 0.607537 | 5.1:-2130564 | MS.gene21879:CDS |
| GGAGGCGAGACTATCGATGA+AGG | 0.612794 | 5.1:-2131333 | MS.gene21879:CDS |
| TTTGTTTAGAAAGCTTCCTG+TGG | 0.616442 | 5.1:-2130632 | MS.gene21879:CDS |
| CAACGCTATCAGCAATGCCG+TGG | 0.618471 | 5.1:-2131488 | MS.gene21879:CDS |
| AGCAGCAGAATCAACCGGCA+TGG | 0.620057 | 5.1:+2131821 | None:intergenic |
| GCATGTATTTGGTCGATCCA+CGG | 0.622544 | 5.1:+2131471 | None:intergenic |
| GTGGAACTGTATGGTGAGGA+AGG | 0.624680 | 5.1:-2130613 | MS.gene21879:CDS |
| CAACCACTTTAATCAATCTG+AGG | 0.628429 | 5.1:-2133254 | MS.gene21879:CDS |
| CCTAACATACCACGGTCACA+GGG | 0.635491 | 5.1:+2131603 | None:intergenic |
| GGCGAGACTATCGATGAAGG+TGG | 0.637509 | 5.1:-2131330 | MS.gene21879:CDS |
| TGCATACTTCAATTTCACCA+AGG | 0.639336 | 5.1:+2132120 | None:intergenic |
| CCCCTTTCCCTAACATACCA+CGG | 0.642679 | 5.1:+2131595 | None:intergenic |
| ATGGTGAGGAAGGTCCTACA+GGG | 0.644246 | 5.1:-2130603 | MS.gene21879:CDS |
| AGCATATGGAAGAGAAGGTG+CGG | 0.644580 | 5.1:+2133189 | None:intergenic |
| TAGGTTGACAATAGTGACCA+AGG | 0.646845 | 5.1:+2131994 | None:intergenic |
| GTTGCATTCTATAAACCAGT+GGG | 0.653192 | 5.1:-2132038 | MS.gene21879:CDS |
| CTGGATGAAAGAAAACAGTA+GGG | 0.660966 | 5.1:+2131430 | None:intergenic |
| CGGTGGAGGAACAAATGATG+GGG | 0.661232 | 5.1:-2131295 | MS.gene21879:CDS |
| AGTTTGAGACCCTGTGACCG+TGG | 0.661594 | 5.1:-2131612 | MS.gene21879:CDS |
| TTGGAACAGCAATGTGATGG+TGG | 0.664789 | 5.1:-2132075 | MS.gene21879:CDS |
| TGTTGCATTCTATAAACCAG+TGG | 0.664919 | 5.1:-2132039 | MS.gene21879:CDS |
| AGAGCCTTGTAACCTTCAGG+AGG | 0.667379 | 5.1:+2131780 | None:intergenic |
| ATGTTGTGAAAGAACCTCAA+TGG | 0.675895 | 5.1:-2130762 | MS.gene21879:CDS |
| ATACTAGTGTATAATCAAGA+GGG | 0.679181 | 5.1:+2131874 | None:intergenic |
| TCCTGTGGAACTGTATGGTG+AGG | 0.682195 | 5.1:-2130617 | MS.gene21879:CDS |
| TATTACTCACAGCACAGTGG+TGG | 0.685056 | 5.1:-2131000 | MS.gene21879:CDS |
| TAGACGTAGTAATTTGCGTG+TGG | 0.689667 | 5.1:-2130830 | MS.gene21879:CDS |
| AGTGGTTGTTGTTGGAACAA+CGG | 0.703604 | 5.1:-2131549 | MS.gene21879:CDS |
| AAGGGAATTTATCAAACACG+GGG | 0.703962 | 5.1:-2131238 | MS.gene21879:CDS |
| ATATGGAAGAGAAGGTGCGG+AGG | 0.709050 | 5.1:+2133192 | None:intergenic |
| TGTTTGGAACAGCAATGTGA+TGG | 0.709746 | 5.1:-2132078 | MS.gene21879:CDS |
| TTGCAGTATATGAGACAATG+GGG | 0.725300 | 5.1:-2130739 | MS.gene21879:CDS |
| ATATATTACTCACAGCACAG+TGG | 0.799299 | 5.1:-2131003 | MS.gene21879:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATATAATGAATAAAAAAA+TGG | + | chr5.1:2130798-2130817 | None:intergenic | 10.0% |
| !! | AATTTACTTGACTATTATTT+AGG | - | chr5.1:2131385-2131404 | MS.gene21879:CDS | 15.0% |
| !! | GTGGTAATTAATTAATTAAA+AGG | + | chr5.1:2130946-2130965 | None:intergenic | 15.0% |
| !! | TCTTCTAATCAAATTAAATA+TGG | - | chr5.1:2131469-2131488 | MS.gene21879:CDS | 15.0% |
| !!! | TTTGAATCATAAACAATTTT+AGG | + | chr5.1:2133119-2133138 | None:intergenic | 15.0% |
| !! | AACAATAACTTGATTAGAAA+AGG | + | chr5.1:2131631-2131650 | None:intergenic | 20.0% |
| !! | ACAATAACTTGATTAGAAAA+GGG | + | chr5.1:2131630-2131649 | None:intergenic | 20.0% |
| !! | AGTAACAAATTTCTTCTAAT+CGG | - | chr5.1:2131276-2131295 | MS.gene21879:CDS | 20.0% |
| !! | AGTCAAGTAAATTATAAGAA+AGG | + | chr5.1:2131378-2131397 | None:intergenic | 20.0% |
| !! | CAACTAATTTCATCTAAATT+AGG | + | chr5.1:2132108-2132127 | None:intergenic | 20.0% |
| !! | GTTAATTTACCAATCAATAA+AGG | - | chr5.1:2131491-2131510 | MS.gene21879:CDS | 20.0% |
| !! | TATGAATTAGAGTATATTGA+TGG | - | chr5.1:2132870-2132889 | MS.gene21879:intron | 20.0% |
| !!! | ATTTAATTTGATTAGAAGAC+AGG | + | chr5.1:2131468-2131487 | None:intergenic | 20.0% |
| !!! | GTAATTATTTTACTGATTAC+AGG | - | chr5.1:2131661-2131680 | MS.gene21879:CDS | 20.0% |
| ! | AAAGAGAAAAATAACTGGAT+TGG | - | chr5.1:2133254-2133273 | MS.gene21879:CDS | 25.0% |
| ! | AAGATGAAACCTTTATTGAT+TGG | + | chr5.1:2131503-2131522 | None:intergenic | 25.0% |
| ! | AGTTAAATTGCTTAGAAGAA+AGG | + | chr5.1:2131543-2131562 | None:intergenic | 25.0% |
| ! | ATACTAGTGTATAATCAAGA+GGG | + | chr5.1:2131960-2131979 | None:intergenic | 25.0% |
| ! | ATTGTATACGCATCAAAAAA+TGG | - | chr5.1:2132903-2132922 | MS.gene21879:intron | 25.0% |
| ! | CAAGTTATTGTTTATATGTC+TGG | - | chr5.1:2131639-2131658 | MS.gene21879:CDS | 25.0% |
| ! | GATTGATATTTCTTCTTATC+TGG | - | chr5.1:2131588-2131607 | MS.gene21879:CDS | 25.0% |
| ! | GTAACAAATTTCTTCTAATC+GGG | - | chr5.1:2131277-2131296 | MS.gene21879:CDS | 25.0% |
| ! | TCCAAATGATAAAAGTAGAA+GGG | - | chr5.1:2132575-2132594 | MS.gene21879:intron | 25.0% |
| ! | TCTTCAAAATCAAGTTAACA+TGG | + | chr5.1:2131033-2131052 | None:intergenic | 25.0% |
| ! | TTCCAAATGATAAAAGTAGA+AGG | - | chr5.1:2132574-2132593 | MS.gene21879:intron | 25.0% |
| ! | TTGACTATTATTTAGGTCAT+TGG | - | chr5.1:2131392-2131411 | MS.gene21879:CDS | 25.0% |
| !! | AATTCACGAATTTCCATTTT+GGG | - | chr5.1:2132191-2132210 | MS.gene21879:intron | 25.0% |
| !! | TAATTCACGAATTTCCATTT+TGG | - | chr5.1:2132190-2132209 | MS.gene21879:intron | 25.0% |
| !! | TCTTCTAAGCAATTTAACTT+TGG | - | chr5.1:2131544-2131563 | MS.gene21879:CDS | 25.0% |
| !! | TTTAACTTTGGTTAAGTCAT+TGG | - | chr5.1:2131556-2131575 | MS.gene21879:CDS | 25.0% |
| !! | TTTTAAACTCTCTTCCTTTA+AGG | - | chr5.1:2133156-2133175 | MS.gene21879:CDS | 25.0% |
| !!! | ATCCAGTTATTTTTCTCTTT+TGG | + | chr5.1:2133254-2133273 | None:intergenic | 25.0% |
| AAAAACCAATCAACAGAAGA+AGG | + | chr5.1:2132441-2132460 | None:intergenic | 30.0% | |
| AAATTCTTCAAACACACAAC+AGG | + | chr5.1:2132318-2132337 | None:intergenic | 30.0% | |
| AATGAACTTCTAAGCCTTAA+AGG | + | chr5.1:2133173-2133192 | None:intergenic | 30.0% | |
| ACTATAGTTCATCAGATTAG+AGG | + | chr5.1:2131438-2131457 | None:intergenic | 30.0% | |
| AGAAACCAATCAACTTAACT+AGG | - | chr5.1:2131050-2131069 | MS.gene21879:CDS | 30.0% | |
| AGAAGGGAATTTATCAAACA+CGG | - | chr5.1:2132591-2132610 | MS.gene21879:intron | 30.0% | |
| ATGGTTGCTAATGTTATATG+AGG | + | chr5.1:2131914-2131933 | None:intergenic | 30.0% | |
| ATTCCAAATTTGAGAGTAGA+AGG | + | chr5.1:2132714-2132733 | None:intergenic | 30.0% | |
| CATACTAGTGTATAATCAAG+AGG | + | chr5.1:2131961-2131980 | None:intergenic | 30.0% | |
| CTAGAACATTAACATAGCAA+AGG | + | chr5.1:2130877-2130896 | None:intergenic | 30.0% | |
| CTCTTGATTATACACTAGTA+TGG | - | chr5.1:2131959-2131978 | MS.gene21879:CDS | 30.0% | |
| GTTAACTATGTTTAGGTCAT+CGG | - | chr5.1:2131299-2131318 | MS.gene21879:CDS | 30.0% | |
| GTTGTTATAGTTATACCTTG+AGG | + | chr5.1:2130774-2130793 | None:intergenic | 30.0% | |
| TAATCGGGTTAACTATGTTT+AGG | - | chr5.1:2131292-2131311 | MS.gene21879:CDS | 30.0% | |
| TAATTAATGTTGTGTCTGAC+AGG | + | chr5.1:2130841-2130860 | None:intergenic | 30.0% | |
| TCGATAAGATAGTAATCATG+AGG | + | chr5.1:2131002-2131021 | None:intergenic | 30.0% | |
| TTAAGGCTTAGAAGTTCATT+TGG | - | chr5.1:2133173-2133192 | MS.gene21879:CDS | 30.0% | |
| TTCACTTGATTACTTTACTG+TGG | - | chr5.1:2131096-2131115 | MS.gene21879:CDS | 30.0% | |
| TTGTTTGTTTGATGTGAACT+GGG | - | chr5.1:2131129-2131148 | MS.gene21879:CDS | 30.0% | |
| TTTGTTTGTTTGATGTGAAC+TGG | - | chr5.1:2131128-2131147 | MS.gene21879:CDS | 30.0% | |
| ! | AAGAAGAAGATGATGATGAT+CGG | + | chr5.1:2130712-2130731 | None:intergenic | 30.0% |
| ! | TGATTTAACCATAGTCTTGA+GGG | + | chr5.1:2131213-2131232 | None:intergenic | 30.0% |
| ! | TTGATTTAACCATAGTCTTG+AGG | + | chr5.1:2131214-2131233 | None:intergenic | 30.0% |
| ! | TTTAGGTCATTGGTTAACAA+AGG | - | chr5.1:2131402-2131421 | MS.gene21879:CDS | 30.0% |
| ! | TTTTGACGATCCTTGTATAT+AGG | + | chr5.1:2132955-2132974 | None:intergenic | 30.0% |
| !! | GTAATCCTAGTTAAGTTGAT+TGG | + | chr5.1:2131058-2131077 | None:intergenic | 30.0% |
| !! | TATTTTACTGATTACAGGAC+AGG | - | chr5.1:2131666-2131685 | MS.gene21879:CDS | 30.0% |
| !! | TCCCTTCTACTTTTATCATT+TGG | + | chr5.1:2132579-2132598 | None:intergenic | 30.0% |
| !!! | GTTGATTGGTTTTTCAACAA+TGG | - | chr5.1:2132447-2132466 | MS.gene21879:intron | 30.0% |
| !!! | TGGATTTTTTGTCCTTTCAA+TGG | - | chr5.1:2132687-2132706 | MS.gene21879:intron | 30.0% |
| AAGGGAATTTATCAAACACG+GGG | - | chr5.1:2132593-2132612 | MS.gene21879:intron | 35.0% | |
| ACGGTAAGGTTCACATTTAT+CGG | + | chr5.1:2132148-2132167 | None:intergenic | 35.0% | |
| AGGAAAAAAGCAGTTGCATT+TGG | + | chr5.1:2130673-2130692 | None:intergenic | 35.0% | |
| ATACAAGGATCGTCAAAACT+TGG | - | chr5.1:2132957-2132976 | MS.gene21879:intron | 35.0% | |
| ATATATTACTCACAGCACAG+TGG | - | chr5.1:2132828-2132847 | MS.gene21879:intron | 35.0% | |
| ATGTTGTGAAAGAACCTCAA+TGG | - | chr5.1:2133069-2133088 | MS.gene21879:intron | 35.0% | |
| ATTGTTGCAGCTGAGTATTT+AGG | - | chr5.1:2133044-2133063 | MS.gene21879:intron | 35.0% | |
| ATTTATCAAACACGGGGATT+TGG | - | chr5.1:2132599-2132618 | MS.gene21879:intron | 35.0% | |
| CAAAACTTGGAATTGGTATC+AGG | - | chr5.1:2132970-2132989 | MS.gene21879:intron | 35.0% | |
| CAACCACTTTAATCAATCTG+AGG | - | chr5.1:2130577-2130596 | MS.gene21879:CDS | 35.0% | |
| CATCTAAATTAGGCTTCTCA+CGG | + | chr5.1:2132098-2132117 | None:intergenic | 35.0% | |
| CCATAACAAATTACCAGCTT+TGG | - | chr5.1:2131930-2131949 | MS.gene21879:CDS | 35.0% | |
| CTGGATGAAAGAAAACAGTA+GGG | + | chr5.1:2132404-2132423 | None:intergenic | 35.0% | |
| CTTCGAATAAGTAACTTCAC+TGG | - | chr5.1:2132792-2132811 | MS.gene21879:intron | 35.0% | |
| CTTTCACAGACATTGTAATG+TGG | - | chr5.1:2132667-2132686 | MS.gene21879:intron | 35.0% | |
| GAAGGGAATTTATCAAACAC+GGG | - | chr5.1:2132592-2132611 | MS.gene21879:intron | 35.0% | |
| GCAGAAAAGAGAAATTTGAG+TGG | + | chr5.1:2130965-2130984 | None:intergenic | 35.0% | |
| GGCCAAAAGAGAAAAATAAC+TGG | - | chr5.1:2133249-2133268 | MS.gene21879:CDS | 35.0% | |
| GTTCCTCAGATTGATTAAAG+TGG | + | chr5.1:2130583-2130602 | None:intergenic | 35.0% | |
| GTTGCAGTATATGAGACAAT+GGG | - | chr5.1:2133091-2133110 | MS.gene21879:CDS | 35.0% | |
| GTTGCATTCTATAAACCAGT+GGG | - | chr5.1:2131793-2131812 | MS.gene21879:CDS | 35.0% | |
| TCTGGATGAAAGAAAACAGT+AGG | + | chr5.1:2132405-2132424 | None:intergenic | 35.0% | |
| TGCATACTTCAATTTCACCA+AGG | + | chr5.1:2131714-2131733 | None:intergenic | 35.0% | |
| TGGTGAACATATAGGTGATT+GGG | - | chr5.1:2132758-2132777 | MS.gene21879:intron | 35.0% | |
| TGTTGCATTCTATAAACCAG+TGG | - | chr5.1:2131792-2131811 | MS.gene21879:CDS | 35.0% | |
| TTCCAGCATCAAGTAATGTA+CGG | + | chr5.1:2132167-2132186 | None:intergenic | 35.0% | |
| TTGCAGTATATGAGACAATG+GGG | - | chr5.1:2133092-2133111 | MS.gene21879:CDS | 35.0% | |
| TTGGTGAACATATAGGTGAT+TGG | - | chr5.1:2132757-2132776 | MS.gene21879:intron | 35.0% | |
| TTTGTTTAGAAAGCTTCCTG+TGG | - | chr5.1:2133199-2133218 | MS.gene21879:CDS | 35.0% | |
| ! | AAGGTTCACATTTATCGGTT+AGG | + | chr5.1:2132143-2132162 | None:intergenic | 35.0% |
| ! | AGCATGTCTTTTAGCAAAGT+TGG | - | chr5.1:2132738-2132757 | MS.gene21879:intron | 35.0% |
| ! | AGTGTTGAGAGAAAAAGTGT+TGG | + | chr5.1:2130736-2130755 | None:intergenic | 35.0% |
| ! | TACTGTTTTCTTTCATCCAG+AGG | - | chr5.1:2132404-2132423 | MS.gene21879:intron | 35.0% |
| ! | TAGAATGCAACAGCTTTTCT+TGG | + | chr5.1:2131784-2131803 | None:intergenic | 35.0% |
| ! | TCACAAAGTTTGAGACTGTT+TGG | - | chr5.1:2131737-2131756 | MS.gene21879:CDS | 35.0% |
| !! | AGCAAAGTTGGTGAACATAT+AGG | - | chr5.1:2132750-2132769 | MS.gene21879:intron | 35.0% |
| !! | CCAAAGCTGGTAATTTGTTA+TGG | + | chr5.1:2131933-2131952 | None:intergenic | 35.0% |
| !! | GAACAAATGATGGGGAATTT+TGG | - | chr5.1:2132544-2132563 | MS.gene21879:intron | 35.0% |
| !! | GTGTTGAGAGAAAAAGTGTT+GGG | + | chr5.1:2130735-2130754 | None:intergenic | 35.0% |
| !! | TTGATTCTGCTGCTTACTTT+TGG | - | chr5.1:2132019-2132038 | MS.gene21879:CDS | 35.0% |
| !!! | ACGAATTTCCATTTTGGGTT+TGG | - | chr5.1:2132196-2132215 | MS.gene21879:intron | 35.0% |
| AAACACCCTTTCGGTACAAA+AGG | + | chr5.1:2132476-2132495 | None:intergenic | 40.0% | |
| AACACCCTTTCGGTACAAAA+GGG | + | chr5.1:2132475-2132494 | None:intergenic | 40.0% | |
| AACCTAGCTACAAGCCTTTA+TGG | - | chr5.1:2131854-2131873 | MS.gene21879:CDS | 40.0% | |
| AAGAAAGAAAATCGCCATGC+CGG | - | chr5.1:2131996-2132015 | MS.gene21879:CDS | 40.0% | |
| AAGTAAGCAGCAGAATCAAC+CGG | + | chr5.1:2132018-2132037 | None:intergenic | 40.0% | |
| ACCTAGCTACAAGCCTTTAT+GGG | - | chr5.1:2131855-2131874 | MS.gene21879:CDS | 40.0% | |
| ACTTGCCTTCTTCTGTTGAT+TGG | - | chr5.1:2132433-2132452 | MS.gene21879:intron | 40.0% | |
| AGAGTAGAAGGTCCATTGAA+AGG | + | chr5.1:2132702-2132721 | None:intergenic | 40.0% | |
| AGTAAAGAACCCGTAACACT+TGG | + | chr5.1:2130605-2130624 | None:intergenic | 40.0% | |
| ATCTGAGGAACCAAGTGTTA+CGG | - | chr5.1:2130592-2130611 | MS.gene21879:CDS | 40.0% | |
| CATCCTGGAACCTATATACA+AGG | - | chr5.1:2132942-2132961 | MS.gene21879:intron | 40.0% | |
| CTAGTATGGTGCACTAATTC+AGG | - | chr5.1:2131973-2131992 | MS.gene21879:CDS | 40.0% | |
| CTCAAACTCCAAACCCAAAA+TGG | + | chr5.1:2132207-2132226 | None:intergenic | 40.0% | |
| CTCATATACTGCAACCATTG+AGG | + | chr5.1:2133086-2133105 | None:intergenic | 40.0% | |
| GAAGGCAAGTAAATTTCCTC+TGG | + | chr5.1:2132423-2132442 | None:intergenic | 40.0% | |
| GATCCTTGTATATAGGTTCC+AGG | + | chr5.1:2132948-2132967 | None:intergenic | 40.0% | |
| GCAAGTACAAAACCCCATAA+AGG | + | chr5.1:2131871-2131890 | None:intergenic | 40.0% | |
| GCATCAAGTAATGTACGGTA+AGG | + | chr5.1:2132162-2132181 | None:intergenic | 40.0% | |
| GCTCTATAAGCGCATGTATT+TGG | + | chr5.1:2132374-2132393 | None:intergenic | 40.0% | |
| GGACCTTCTACTCTCAAATT+TGG | - | chr5.1:2132708-2132727 | MS.gene21879:intron | 40.0% | |
| GGATCGTCAAAACTTGGAAT+TGG | - | chr5.1:2132963-2132982 | MS.gene21879:intron | 40.0% | |
| GGTTGCAGTATATGAGACAA+TGG | - | chr5.1:2133090-2133109 | MS.gene21879:CDS | 40.0% | |
| GTAACTTCACTGGAGAACTT+TGG | - | chr5.1:2132802-2132821 | MS.gene21879:intron | 40.0% | |
| GTATATAGGTTCCAGGATGA+GGG | + | chr5.1:2132941-2132960 | None:intergenic | 40.0% | |
| GTTCATGTGAAACCAGCATT+TGG | - | chr5.1:2132639-2132658 | MS.gene21879:intron | 40.0% | |
| TACCGTACATTACTTGATGC+TGG | - | chr5.1:2132162-2132181 | MS.gene21879:intron | 40.0% | |
| TGTATATAGGTTCCAGGATG+AGG | + | chr5.1:2132942-2132961 | None:intergenic | 40.0% | |
| TTTACTGCAGTGGTTGTTGT+TGG | - | chr5.1:2132274-2132293 | MS.gene21879:intron | 40.0% | |
| ! | ACTGGATTGGAGATGAAAGA+TGG | - | chr5.1:2133267-2133286 | MS.gene21879:CDS | 40.0% |
| ! | AGTGGTTGTTGTTGGAACAA+CGG | - | chr5.1:2132282-2132301 | MS.gene21879:intron | 40.0% |
| ! | ATGATGATGATCGGATGCAT+TGG | + | chr5.1:2130703-2130722 | None:intergenic | 40.0% |
| ! | CATGCGCTTATAGAGCATTA+TGG | - | chr5.1:2132378-2132397 | MS.gene21879:intron | 40.0% |
| ! | GAAGGTGGATCAAATTTTCC+CGG | - | chr5.1:2132516-2132535 | MS.gene21879:intron | 40.0% |
| ! | TAGACGTAGTAATTTGCGTG+TGG | - | chr5.1:2133001-2133020 | MS.gene21879:intron | 40.0% |
| ! | TAGGTTGACAATAGTGACCA+AGG | + | chr5.1:2131840-2131859 | None:intergenic | 40.0% |
| ! | TGATGATGATCGGATGCATT+GGG | + | chr5.1:2130702-2130721 | None:intergenic | 40.0% |
| ! | TGTTTGGAACAGCAATGTGA+TGG | - | chr5.1:2131753-2131772 | MS.gene21879:CDS | 40.0% |
| ! | TTTTTCTCTTTTGGCCCTGT+AGG | + | chr5.1:2133245-2133264 | None:intergenic | 40.0% |
| AAAGCTCTCCCTCAAGACTA+TGG | - | chr5.1:2131202-2131221 | MS.gene21879:CDS | 45.0% | |
| AAGCTTCCTGTGGAACTGTA+TGG | - | chr5.1:2133209-2133228 | MS.gene21879:CDS | 45.0% | |
| AATGTTGTGTCTGACAGGCA+TGG | + | chr5.1:2130836-2130855 | None:intergenic | 45.0% | |
| ACAGCACAGTGGTGGTAAAT+GGG | - | chr5.1:2132839-2132858 | MS.gene21879:intron | 45.0% | |
| ACCGTGGTATGTTAGGGAAA+GGG | - | chr5.1:2132235-2132254 | MS.gene21879:intron | 45.0% | |
| AGACTAATCGCTTGAGGTAG+TGG | - | chr5.1:2131174-2131193 | MS.gene21879:CDS | 45.0% | |
| AGCATATGGAAGAGAAGGTG+CGG | + | chr5.1:2130645-2130664 | None:intergenic | 45.0% | |
| AGCGAAGCATATGGAAGAGA+AGG | + | chr5.1:2130650-2130669 | None:intergenic | 45.0% | |
| ATGATCGGATGCATTGGGTT+TGG | + | chr5.1:2130697-2130716 | None:intergenic | 45.0% | |
| CATGTGAAACCAGCATTTGG+TGG | - | chr5.1:2132642-2132661 | MS.gene21879:intron | 45.0% | |
| CCAAGGATGTGAAATCCATC+TGG | + | chr5.1:2131823-2131842 | None:intergenic | 45.0% | |
| CCTAGCTACAAGCCTTTATG+GGG | - | chr5.1:2131856-2131875 | MS.gene21879:CDS | 45.0% | |
| CTGTAGAGACTAATCGCTTG+AGG | - | chr5.1:2131168-2131187 | MS.gene21879:CDS | 45.0% | |
| GACTAATCGCTTGAGGTAGT+GGG | - | chr5.1:2131175-2131194 | MS.gene21879:CDS | 45.0% | |
| GCATGTATTTGGTCGATCCA+CGG | + | chr5.1:2132363-2132382 | None:intergenic | 45.0% | |
| GTCTCTACAGTTGCATGCAA+AGG | + | chr5.1:2131158-2131177 | None:intergenic | 45.0% | |
| GTGAAAGTTCCACCAAATGC+TGG | + | chr5.1:2132654-2132673 | None:intergenic | 45.0% | |
| GTTATACCTTGAGGCCATTG+AGG | + | chr5.1:2130765-2130784 | None:intergenic | 45.0% | |
| TAGGGAAAGGGGTTTCAGTA+GGG | - | chr5.1:2132247-2132266 | MS.gene21879:intron | 45.0% | |
| TATTACTCACAGCACAGTGG+TGG | - | chr5.1:2132831-2132850 | MS.gene21879:intron | 45.0% | |
| TCAACACTCCTCTTCCTCAA+TGG | - | chr5.1:2130748-2130767 | MS.gene21879:CDS | 45.0% | |
| TCAACCTCCTGAAGGTTACA+AGG | - | chr5.1:2132047-2132066 | MS.gene21879:CDS | 45.0% | |
| TCTGAGGAACCAAGTGTTAC+GGG | - | chr5.1:2130593-2130612 | MS.gene21879:CDS | 45.0% | |
| TTACAAGGCTCTTGGCTACT+TGG | - | chr5.1:2132062-2132081 | MS.gene21879:CDS | 45.0% | |
| TTAGGGAAAGGGGTTTCAGT+AGG | - | chr5.1:2132246-2132265 | MS.gene21879:intron | 45.0% | |
| TTGGAACAGCAATGTGATGG+TGG | - | chr5.1:2131756-2131775 | MS.gene21879:CDS | 45.0% | |
| TTGTAACCTTCAGGAGGTTG+AGG | + | chr5.1:2132048-2132067 | None:intergenic | 45.0% | |
| ! | ACAGGACAGGATTTTGCTTC+TGG | - | chr5.1:2131679-2131698 | MS.gene21879:CDS | 45.0% |
| ! | CCAGATGGATTTCACATCCT+TGG | - | chr5.1:2131820-2131839 | MS.gene21879:CDS | 45.0% |
| ! | GTAGGGACTTTTTACTGCAG+TGG | - | chr5.1:2132264-2132283 | MS.gene21879:intron | 45.0% |
| ! | TGCATTTGGAGCGAAGCATA+TGG | + | chr5.1:2130659-2130678 | None:intergenic | 45.0% |
| !! | GCTTCTGGAATTGTGAACCT+TGG | - | chr5.1:2131694-2131713 | MS.gene21879:CDS | 45.0% |
| !! | TTGTACCGAAAGGGTGTTTC+TGG | - | chr5.1:2132477-2132496 | MS.gene21879:intron | 45.0% |
| AATCCATCTGGTACTCCCAC+TGG | + | chr5.1:2131811-2131830 | None:intergenic | 50.0% | |
| ATGGTGAGGAAGGTCCTACA+GGG | - | chr5.1:2133228-2133247 | MS.gene21879:CDS | 50.0% | |
| CACAGCACAGTGGTGGTAAA+TGG | - | chr5.1:2132838-2132857 | MS.gene21879:intron | 50.0% | |
| CATGCAAGTTACCCTCATCC+TGG | - | chr5.1:2132927-2132946 | MS.gene21879:intron | 50.0% | |
| CCATCATTTGTTCCTCCACC+GGG | + | chr5.1:2132537-2132556 | None:intergenic | 50.0% | |
| CCCATCATTTGTTCCTCCAC+CGG | + | chr5.1:2132538-2132557 | None:intergenic | 50.0% | |
| CCCCATAAAGGCTTGTAGCT+AGG | + | chr5.1:2131859-2131878 | None:intergenic | 50.0% | |
| CCCCTTTCCCTAACATACCA+CGG | + | chr5.1:2132239-2132258 | None:intergenic | 50.0% | |
| CCGGTGGAGGAACAAATGAT+GGG | - | chr5.1:2132535-2132554 | MS.gene21879:intron | 50.0% | |
| CCGTGGTATGTTAGGGAAAG+GGG | - | chr5.1:2132236-2132255 | MS.gene21879:intron | 50.0% | |
| CCTAACATACCACGGTCACA+GGG | + | chr5.1:2132231-2132250 | None:intergenic | 50.0% | |
| CCTGAAGGTTACAAGGCTCT+TGG | - | chr5.1:2132054-2132073 | MS.gene21879:CDS | 50.0% | |
| CCTGTGACCGTGGTATGTTA+GGG | - | chr5.1:2132229-2132248 | MS.gene21879:intron | 50.0% | |
| CGGTGGAGGAACAAATGATG+GGG | - | chr5.1:2132536-2132555 | MS.gene21879:intron | 50.0% | |
| GACCGTGGTATGTTAGGGAA+AGG | - | chr5.1:2132234-2132253 | MS.gene21879:intron | 50.0% | |
| GTGGAACTGTATGGTGAGGA+AGG | - | chr5.1:2133218-2133237 | MS.gene21879:CDS | 50.0% | |
| TATGGTGAGGAAGGTCCTAC+AGG | - | chr5.1:2133227-2133246 | MS.gene21879:CDS | 50.0% | |
| TCAAGAGGGTTCTCCAAAGC+TGG | + | chr5.1:2131946-2131965 | None:intergenic | 50.0% | |
| TCCTCACCATACAGTTCCAC+AGG | + | chr5.1:2133218-2133237 | None:intergenic | 50.0% | |
| TCCTGTGGAACTGTATGGTG+AGG | - | chr5.1:2133214-2133233 | MS.gene21879:CDS | 50.0% | |
| TCGGATGCATTGGGTTTGGA+AGG | + | chr5.1:2130693-2130712 | None:intergenic | 50.0% | |
| ! | AGAGCCTTGTAACCTTCAGG+AGG | + | chr5.1:2132054-2132073 | None:intergenic | 50.0% |
| ! | ATATGGAAGAGAAGGTGCGG+AGG | + | chr5.1:2130642-2130661 | None:intergenic | 50.0% |
| ! | CCAAGAGCCTTGTAACCTTC+AGG | + | chr5.1:2132057-2132076 | None:intergenic | 50.0% |
| ! | GGAGCCCTTTTGTACCGAAA+GGG | - | chr5.1:2132468-2132487 | MS.gene21879:intron | 50.0% |
| ! | GGATCAAATTTTCCCGGTGG+AGG | - | chr5.1:2132522-2132541 | MS.gene21879:intron | 50.0% |
| ! | GGTGGATCAAATTTTCCCGG+TGG | - | chr5.1:2132519-2132538 | MS.gene21879:intron | 50.0% |
| ! | TGGAGCCCTTTTGTACCGAA+AGG | - | chr5.1:2132467-2132486 | MS.gene21879:intron | 50.0% |
| !! | AAACCAGTGGGAGTACCAGA+TGG | - | chr5.1:2131805-2131824 | MS.gene21879:CDS | 50.0% |
| !! | TAATCGCTTGAGGTAGTGGG+TGG | - | chr5.1:2131178-2131197 | MS.gene21879:CDS | 50.0% |
| !! | TACCGAAAGGGTGTTTCTGG+AGG | - | chr5.1:2132480-2132499 | MS.gene21879:intron | 50.0% |
| AGCAGCAGAATCAACCGGCA+TGG | + | chr5.1:2132013-2132032 | None:intergenic | 55.0% | |
| CAACGCTATCAGCAATGCCG+TGG | - | chr5.1:2132343-2132362 | MS.gene21879:intron | 55.0% | |
| CCCGGTGGAGGAACAAATGA+TGG | - | chr5.1:2132534-2132553 | MS.gene21879:intron | 55.0% | |
| CCCTAACATACCACGGTCAC+AGG | + | chr5.1:2132232-2132251 | None:intergenic | 55.0% | |
| CCCTGTGACCGTGGTATGTT+AGG | - | chr5.1:2132228-2132247 | MS.gene21879:intron | 55.0% | |
| CCTCTTCCTCAATGGCCTCA+AGG | - | chr5.1:2130756-2130775 | MS.gene21879:CDS | 55.0% | |
| CCTTGAGGCCATTGAGGAAG+AGG | + | chr5.1:2130759-2130778 | None:intergenic | 55.0% | |
| CGCCTCCAGAAACACCCTTT+CGG | + | chr5.1:2132485-2132504 | None:intergenic | 55.0% | |
| GGAGGCGAGACTATCGATGA+AGG | - | chr5.1:2132498-2132517 | MS.gene21879:intron | 55.0% | |
| GGCGAGACTATCGATGAAGG+TGG | - | chr5.1:2132501-2132520 | MS.gene21879:intron | 55.0% | |
| TGGCTACCTCAACCTCCTGA+AGG | - | chr5.1:2132039-2132058 | MS.gene21879:CDS | 55.0% | |
| ! | AGTTTGAGACCCTGTGACCG+TGG | - | chr5.1:2132219-2132238 | MS.gene21879:intron | 55.0% |
| ! | CACGGCATTGCTGATAGCGT+TGG | + | chr5.1:2132345-2132364 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 2130561 | 2133292 | 2130561 | ID=MS.gene21879 |
| chr5.1 | mRNA | 2130561 | 2133292 | 2130561 | ID=MS.gene21879.t1;Parent=MS.gene21879 |
| chr5.1 | exon | 2133076 | 2133292 | 2133076 | ID=MS.gene21879.t1.exon1;Parent=MS.gene21879.t1 |
| chr5.1 | CDS | 2133076 | 2133292 | 2133076 | ID=cds.MS.gene21879.t1;Parent=MS.gene21879.t1 |
| chr5.1 | exon | 2130561 | 2132170 | 2130561 | ID=MS.gene21879.t1.exon2;Parent=MS.gene21879.t1 |
| chr5.1 | CDS | 2130561 | 2132170 | 2130561 | ID=cds.MS.gene21879.t1;Parent=MS.gene21879.t1 |
| Gene Sequence |
| Protein sequence |
