Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058119.t1 | XP_003610864.1 | 94.7 | 608 | 29 | 3 | 2 | 607 | 1 | 607 | 0.00E+00 | 1231.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058119.t1 | G7K6I4 | 94.7 | 608 | 29 | 3 | 2 | 607 | 1 | 607 | 0.0e+00 | 1231.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058119 | MS.gene21879 | 0.869167 | 3.79E-66 | -1.69E-46 |
| MS.gene058119 | MS.gene94217 | 0.809573 | 1.77E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058119.t1 | MTR_5g007860 | 94.737 | 608 | 29 | 3 | 2 | 607 | 1 | 607 | 0.0 | 1187 |
| MS.gene058119.t1 | MTR_4g077620 | 67.128 | 578 | 180 | 7 | 31 | 607 | 1 | 569 | 0.0 | 788 |
| MS.gene058119.t1 | MTR_1g080370 | 57.455 | 550 | 222 | 4 | 57 | 605 | 20 | 558 | 0.0 | 665 |
| MS.gene058119.t1 | MTR_1g080410 | 57.455 | 550 | 222 | 4 | 57 | 605 | 20 | 558 | 0.0 | 665 |
| MS.gene058119.t1 | MTR_2g067640 | 47.207 | 555 | 262 | 8 | 54 | 605 | 14 | 540 | 6.06e-174 | 504 |
| MS.gene058119.t1 | MTR_2g062430 | 46.112 | 553 | 270 | 9 | 56 | 605 | 25 | 552 | 4.92e-170 | 495 |
| MS.gene058119.t1 | MTR_2g062410 | 44.946 | 554 | 274 | 9 | 59 | 605 | 56 | 585 | 2.33e-163 | 479 |
| MS.gene058119.t1 | MTR_2g062370 | 43.494 | 561 | 282 | 9 | 56 | 605 | 53 | 589 | 2.82e-157 | 464 |
| MS.gene058119.t1 | MTR_4g131710 | 43.009 | 565 | 289 | 10 | 52 | 605 | 43 | 585 | 5.64e-154 | 455 |
| MS.gene058119.t1 | MTR_2g062380 | 43.670 | 545 | 271 | 10 | 72 | 605 | 40 | 559 | 4.29e-152 | 449 |
| MS.gene058119.t1 | MTR_2g062340 | 43.007 | 572 | 265 | 11 | 41 | 606 | 1 | 517 | 1.76e-150 | 444 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058119.t1 | AT5G43950 | 57.739 | 575 | 226 | 6 | 38 | 607 | 4 | 566 | 0.0 | 669 |
| MS.gene058119.t1 | AT1G04090 | 57.194 | 556 | 227 | 6 | 57 | 606 | 21 | 571 | 0.0 | 661 |
| MS.gene058119.t1 | AT3G04350 | 54.878 | 574 | 241 | 5 | 38 | 605 | 4 | 565 | 0.0 | 650 |
| MS.gene058119.t1 | AT5G18490 | 54.895 | 572 | 231 | 8 | 38 | 605 | 3 | 551 | 0.0 | 644 |
| MS.gene058119.t1 | AT3G04350 | 55.741 | 540 | 221 | 5 | 72 | 605 | 16 | 543 | 0.0 | 625 |
| MS.gene058119.t1 | AT2G44230 | 45.063 | 557 | 272 | 9 | 54 | 605 | 14 | 541 | 3.85e-162 | 474 |
| MS.gene058119.t1 | AT2G44260 | 44.118 | 578 | 284 | 12 | 39 | 605 | 3 | 552 | 2.18e-160 | 471 |
| MS.gene058119.t1 | AT2G44260 | 44.917 | 541 | 264 | 10 | 71 | 605 | 70 | 582 | 1.83e-155 | 459 |
| MS.gene058119.t1 | AT3G01870 | 42.707 | 569 | 272 | 12 | 54 | 605 | 52 | 583 | 1.93e-142 | 426 |
| MS.gene058119.t1 | AT3G01880 | 41.958 | 572 | 278 | 13 | 54 | 607 | 56 | 591 | 8.20e-138 | 414 |
Find 146 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTCACGAATTTCCATTT+TGG | 0.139701 | 5.4:-3122705 | MS.gene058119:CDS |
| GAACAAATGATGGGGAATTT+TGG | 0.167237 | 5.4:-3122351 | MS.gene058119:CDS |
| AACCTAGCTACAAGCCTTTA+TGG | 0.169684 | 5.4:-3123041 | MS.gene058119:CDS |
| GGACCTTCTACTCTCAAATT+TGG | 0.175428 | 5.4:-3122187 | MS.gene058119:CDS |
| CAACTAATTTCATCTAAATT+AGG | 0.185035 | 5.4:+3122790 | None:intergenic |
| AATGAACTTCTAAGCCTTAA+AGG | 0.224297 | 5.4:+3121725 | None:intergenic |
| CACAGCACAGTGGTGGTAAA+TGG | 0.225044 | 5.4:-3122057 | MS.gene058119:CDS |
| TTGTACCGAAAGGGTGTTTC+TGG | 0.228534 | 5.4:-3122418 | MS.gene058119:CDS |
| ACTTGCCTTCTTCTGTTGAT+TGG | 0.274633 | 5.4:-3122462 | MS.gene058119:CDS |
| ATTTATCAAACACGGGGATT+TGG | 0.281262 | 5.4:-3122296 | MS.gene058119:CDS |
| CTCAAACTCCAAACCCAAAA+TGG | 0.284220 | 5.4:+3122691 | None:intergenic |
| GCTCTATAAGCGCATGTATT+TGG | 0.287269 | 5.4:+3122524 | None:intergenic |
| TTGATTCTGCTGCTTACTTT+TGG | 0.308078 | 5.4:-3122876 | MS.gene058119:CDS |
| CCCTGTGACCGTGGTATGTT+AGG | 0.309045 | 5.4:-3122667 | MS.gene058119:CDS |
| ACGGTAAGGTTCACATTTAT+CGG | 0.312398 | 5.4:+3122750 | None:intergenic |
| CCAAGGCTGGTAATTTGTTA+TGG | 0.316631 | 5.4:+3122965 | None:intergenic |
| CTAGTATGGTGCACTAATTC+AGG | 0.318499 | 5.4:-3122922 | MS.gene058119:CDS |
| TTCCAAATGATAAAAGTAGA+AGG | 0.333241 | 5.4:-3122321 | MS.gene058119:CDS |
| ACCTAGCTACAAGCCTTTAT+GGG | 0.339309 | 5.4:-3123040 | MS.gene058119:CDS |
| TCACAAAGTTTGAGACTGTT+TGG | 0.349310 | 5.4:-3123158 | MS.gene058119:CDS |
| CAAAACTTGGAATTGGTATC+AGG | 0.354205 | 5.4:-3121925 | MS.gene058119:CDS |
| ATTCCAAATTTGAGAGTAGA+AGG | 0.364392 | 5.4:+3122184 | None:intergenic |
| TTAAGGCTTAGAAGTTCATT+TGG | 0.371438 | 5.4:-3121722 | MS.gene058119:CDS |
| CCAAGAGCCTTGTAACCTTC+AGG | 0.373592 | 5.4:+3122841 | None:intergenic |
| TTACAAGGCTCTTGGCTACT+TGG | 0.375921 | 5.4:-3122833 | MS.gene058119:CDS |
| CTCTTGATTATACACTAGTA+TGG | 0.389244 | 5.4:-3122936 | MS.gene058119:CDS |
| CCCGGTGGAGGAACAAATGA+TGG | 0.402458 | 5.4:-3122361 | MS.gene058119:CDS |
| TCTGAGGAACCAAGTGTTAC+GGG | 0.402750 | 5.4:-3124302 | MS.gene058119:CDS |
| CCCATCATTTGTTCCTCCAC+CGG | 0.404728 | 5.4:+3122360 | None:intergenic |
| CATGCGCTTATAGAGCATTA+TGG | 0.407024 | 5.4:-3122517 | MS.gene058119:CDS |
| GGATCGTCAAAACTTGGAAT+TGG | 0.408909 | 5.4:-3121932 | MS.gene058119:CDS |
| CATCTAAATTAGGCTTCTTA+CGG | 0.416993 | 5.4:+3122800 | None:intergenic |
| AAACACCCTTTCGGTACAAA+AGG | 0.418519 | 5.4:+3122422 | None:intergenic |
| CGCCTCCAGAAACACCCTTT+CGG | 0.419938 | 5.4:+3122413 | None:intergenic |
| AAGGTTCACATTTATCGGTT+AGG | 0.425276 | 5.4:+3122755 | None:intergenic |
| AGCAAAGTTGGTGAACATAT+AGG | 0.438872 | 5.4:-3122145 | MS.gene058119:CDS |
| TGCATTTGGAGCGAAGCATA+TGG | 0.440207 | 5.4:+3124239 | None:intergenic |
| TTGGTGAACATATAGGTGAT+TGG | 0.444018 | 5.4:-3122138 | MS.gene058119:CDS |
| ATGATCGGATGCATTGGGTT+TGG | 0.445916 | 5.4:+3124201 | None:intergenic |
| ATTGTTGCAGCTGAGTATTT+AGG | 0.446537 | 5.4:-3121851 | MS.gene058119:CDS |
| TACCGTACATTACTTGATGC+TGG | 0.447194 | 5.4:-3122733 | MS.gene058119:CDS |
| CCAGATGGATTTCACATCCT+TGG | 0.449720 | 5.4:-3123075 | MS.gene058119:CDS |
| TATGAATTAGAGTATATTGA+TGG | 0.450379 | 5.4:-3122025 | MS.gene058119:CDS |
| CCCTAACATACCACGGTCAC+AGG | 0.451878 | 5.4:+3122666 | None:intergenic |
| TTTACTGCAGTGGTTGTTGT+TGG | 0.452580 | 5.4:-3122621 | MS.gene058119:CDS |
| TATGGTGAGGAAGGTCCTAC+AGG | 0.453139 | 5.4:-3121668 | MS.gene058119:CDS |
| AAATTCTTCAAACACACAAC+AGG | 0.455952 | 5.4:+3122580 | None:intergenic |
| ATACAAGGATCGTCAAAACT+TGG | 0.457651 | 5.4:-3121938 | MS.gene058119:CDS |
| GCAAGTACAAAACCCCATAA+AGG | 0.458789 | 5.4:+3123027 | None:intergenic |
| GATCCTTGTATATAGGTTCC+AGG | 0.460143 | 5.4:+3121950 | None:intergenic |
| GTAACTTCACTGGAGAACTT+TGG | 0.460209 | 5.4:-3122093 | MS.gene058119:CDS |
| TGGTGAACATATAGGTGATT+GGG | 0.464800 | 5.4:-3122137 | MS.gene058119:CDS |
| TGTATATAGGTTCCAGGATG+AGG | 0.471629 | 5.4:+3121956 | None:intergenic |
| CCTTGAGGCCATTGAGGAAG+AGG | 0.473899 | 5.4:+3124139 | None:intergenic |
| ATCTGAGGAACCAAGTGTTA+CGG | 0.474973 | 5.4:-3124303 | MS.gene058119:CDS |
| CCATAACAAATTACCAGCCT+TGG | 0.474975 | 5.4:-3122965 | MS.gene058119:CDS |
| ACAGCACAGTGGTGGTAAAT+GGG | 0.478438 | 5.4:-3122056 | MS.gene058119:CDS |
| GTTGCAGTATATGAGACAAT+GGG | 0.481252 | 5.4:-3121804 | MS.gene058119:CDS |
| ACCGTGGTATGTTAGGGAAA+GGG | 0.483580 | 5.4:-3122660 | MS.gene058119:CDS |
| GTTCATGTGAAACCAGCATT+TGG | 0.492138 | 5.4:-3122256 | MS.gene058119:CDS |
| GAAGGCAAGTAAATTTCCTC+TGG | 0.494221 | 5.4:+3122475 | None:intergenic |
| TCAACACTCCTCTTCCTCAA+TGG | 0.495707 | 5.4:-3124147 | MS.gene058119:CDS |
| GTGAAAGTTCCACCAAATGC+TGG | 0.501784 | 5.4:+3122244 | None:intergenic |
| CCATCATTTGTTCCTCCACC+GGG | 0.501856 | 5.4:+3122361 | None:intergenic |
| CCAAGGATGTGAAATCCATC+TGG | 0.503558 | 5.4:+3123075 | None:intergenic |
| GCTTCTGGAATTGTGAACCT+TGG | 0.503605 | 5.4:-3123201 | MS.gene058119:CDS |
| AAGTAAGCAGCAGAATCAAC+CGG | 0.508782 | 5.4:+3122880 | None:intergenic |
| CACGGCATTGCTGATAGCGT+TGG | 0.508920 | 5.4:+3122553 | None:intergenic |
| CTCATATACTGCAACCATTG+AGG | 0.510301 | 5.4:+3121812 | None:intergenic |
| CCTGAAGGTTACAAGGCTCT+TGG | 0.512936 | 5.4:-3122841 | MS.gene058119:CDS |
| TTAGGGAAAGGGGTTTCAGT+AGG | 0.513416 | 5.4:-3122649 | MS.gene058119:CDS |
| ATGATGATGATCGGATGCAT+TGG | 0.513727 | 5.4:+3124195 | None:intergenic |
| TGATGATGATCGGATGCATT+GGG | 0.516859 | 5.4:+3124196 | None:intergenic |
| TTGTAACCTTCAGGAGGTTG+AGG | 0.516986 | 5.4:+3122850 | None:intergenic |
| TCAACCTCCTGAAGGTTACA+AGG | 0.518511 | 5.4:-3122848 | MS.gene058119:CDS |
| CCGTGGTATGTTAGGGAAAG+GGG | 0.522778 | 5.4:-3122659 | MS.gene058119:CDS |
| CATCCTGGAACCTATATACA+AGG | 0.523885 | 5.4:-3121953 | MS.gene058119:CDS |
| GTTCCTCAGATTGATTAAAG+TGG | 0.527441 | 5.4:+3124315 | None:intergenic |
| CTTCGAATAAGTAACTTCAC+TGG | 0.528369 | 5.4:-3122103 | MS.gene058119:CDS |
| AAGCTTCCTGTGGAACTGTA+TGG | 0.531076 | 5.4:-3121686 | MS.gene058119:CDS |
| CCTCTTCCTCAATGGCCTCA+AGG | 0.531772 | 5.4:-3124139 | MS.gene058119:intron |
| GTTATACCTTGAGGCCATTG+AGG | 0.537258 | 5.4:+3124133 | None:intergenic |
| CCTGTGACCGTGGTATGTTA+GGG | 0.540441 | 5.4:-3122666 | MS.gene058119:CDS |
| TCCAAATGATAAAAGTAGAA+GGG | 0.543171 | 5.4:-3122320 | MS.gene058119:CDS |
| TAGGGAAAGGGGTTTCAGTA+GGG | 0.545626 | 5.4:-3122648 | MS.gene058119:CDS |
| TGGCTACCTCAACCTCCTGA+AGG | 0.547085 | 5.4:-3122856 | MS.gene058119:CDS |
| AATCCATCTGGTACTCCCAC+TGG | 0.548701 | 5.4:+3123087 | None:intergenic |
| GACCGTGGTATGTTAGGGAA+AGG | 0.549630 | 5.4:-3122661 | MS.gene058119:CDS |
| AACACCCTTTCGGTACAAAA+GGG | 0.549967 | 5.4:+3122423 | None:intergenic |
| CATGCAAGTTACCCTCATCC+TGG | 0.555899 | 5.4:-3121968 | MS.gene058119:CDS |
| TCCTCACCATACAGTTCCAC+AGG | 0.556027 | 5.4:+3121680 | None:intergenic |
| TCTGGATGAAAGAAAACAGT+AGG | 0.556534 | 5.4:+3122493 | None:intergenic |
| AGAGTAGAAGGTCCATTGAA+AGG | 0.557117 | 5.4:+3122196 | None:intergenic |
| ATGGTTGCTAATGTTATATG+AGG | 0.557837 | 5.4:+3122984 | None:intergenic |
| AAGAAAGAAAATCGCCATGC+CGG | 0.560298 | 5.4:-3122899 | MS.gene058119:CDS |
| TACCGAAAGGGTGTTTCTGG+AGG | 0.563977 | 5.4:-3122415 | MS.gene058119:CDS |
| TTCCAGCATCAAGTAATGTA+CGG | 0.564801 | 5.4:+3122731 | None:intergenic |
| CCCCATAAAGGCTTGTAGCT+AGG | 0.566011 | 5.4:+3123039 | None:intergenic |
| CATGTGAAACCAGCATTTGG+TGG | 0.567022 | 5.4:-3122253 | MS.gene058119:CDS |
| GCATCAAGTAATGTACGGTA+AGG | 0.567450 | 5.4:+3122736 | None:intergenic |
| TCGGATGCATTGGGTTTGGA+AGG | 0.573549 | 5.4:+3124205 | None:intergenic |
| GGTTGCAGTATATGAGACAA+TGG | 0.577104 | 5.4:-3121805 | MS.gene058119:CDS |
| CCGGTGGAGGAACAAATGAT+GGG | 0.577469 | 5.4:-3122360 | MS.gene058119:CDS |
| AGTAAAGAACCCGTAACACT+TGG | 0.579715 | 5.4:+3124293 | None:intergenic |
| GAAGGGAATTTATCAAACAC+GGG | 0.582141 | 5.4:-3122303 | MS.gene058119:CDS |
| CCTAGCTACAAGCCTTTATG+GGG | 0.589573 | 5.4:-3123039 | MS.gene058119:CDS |
| AAACCAGTGGGAGTACCAGA+TGG | 0.591413 | 5.4:-3123090 | MS.gene058119:CDS |
| GTATATAGGTTCCAGGATGA+GGG | 0.595393 | 5.4:+3121957 | None:intergenic |
| AGCGAAGCATATGGAAGAGA+AGG | 0.597525 | 5.4:+3124248 | None:intergenic |
| AGAAGGGAATTTATCAAACA+CGG | 0.598533 | 5.4:-3122304 | MS.gene058119:CDS |
| AAGAAGAAGATGATGATGAT+CGG | 0.599526 | 5.4:+3124186 | None:intergenic |
| CTTTCACAGACATTGTAATG+TGG | 0.602196 | 5.4:-3122228 | MS.gene058119:CDS |
| CATACTAGTGTATAATCAAG+AGG | 0.607012 | 5.4:+3122937 | None:intergenic |
| ACTGGATTGGAGATGAAAGA+TGG | 0.607537 | 5.4:-3121628 | MS.gene058119:CDS |
| GGAGGCGAGACTATCGATGA+AGG | 0.612794 | 5.4:-3122397 | MS.gene058119:CDS |
| TTTGTTTAGAAAGCTTCCTG+TGG | 0.616442 | 5.4:-3121696 | MS.gene058119:CDS |
| CAACGCTATCAGCAATGCCG+TGG | 0.618471 | 5.4:-3122552 | MS.gene058119:CDS |
| AGCAGCAGAATCAACCGGCA+TGG | 0.620057 | 5.4:+3122885 | None:intergenic |
| GCATGTATTTGGTCGATCCA+CGG | 0.622544 | 5.4:+3122535 | None:intergenic |
| GTGGAACTGTATGGTGAGGA+AGG | 0.624680 | 5.4:-3121677 | MS.gene058119:CDS |
| CAACCACTTTAATCAATCTG+AGG | 0.628429 | 5.4:-3124318 | MS.gene058119:CDS |
| CCTAACATACCACGGTCACA+GGG | 0.635491 | 5.4:+3122667 | None:intergenic |
| GGCGAGACTATCGATGAAGG+TGG | 0.637509 | 5.4:-3122394 | MS.gene058119:CDS |
| TGCATACTTCAATTTCACCA+AGG | 0.639336 | 5.4:+3123184 | None:intergenic |
| CCCCTTTCCCTAACATACCA+CGG | 0.642679 | 5.4:+3122659 | None:intergenic |
| ATGGTGAGGAAGGTCCTACA+GGG | 0.644246 | 5.4:-3121667 | MS.gene058119:CDS |
| AGCATATGGAAGAGAAGGTG+CGG | 0.644580 | 5.4:+3124253 | None:intergenic |
| TAGGTTGACAATAGTGACCA+AGG | 0.646845 | 5.4:+3123058 | None:intergenic |
| GTTGCATTCTATAAACCAGT+GGG | 0.653192 | 5.4:-3123102 | MS.gene058119:CDS |
| CTGGATGAAAGAAAACAGTA+GGG | 0.660966 | 5.4:+3122494 | None:intergenic |
| CGGTGGAGGAACAAATGATG+GGG | 0.661232 | 5.4:-3122359 | MS.gene058119:CDS |
| AGTTTGAGACCCTGTGACCG+TGG | 0.661594 | 5.4:-3122676 | MS.gene058119:CDS |
| TTGGAACAGCAATGTGATGG+TGG | 0.664789 | 5.4:-3123139 | MS.gene058119:CDS |
| TGTTGCATTCTATAAACCAG+TGG | 0.664919 | 5.4:-3123103 | MS.gene058119:CDS |
| AGAGCCTTGTAACCTTCAGG+AGG | 0.667379 | 5.4:+3122844 | None:intergenic |
| ATGTTGTGAAAGAACCTCAA+TGG | 0.675895 | 5.4:-3121826 | MS.gene058119:CDS |
| ATACTAGTGTATAATCAAGA+GGG | 0.679181 | 5.4:+3122938 | None:intergenic |
| TCCTGTGGAACTGTATGGTG+AGG | 0.682195 | 5.4:-3121681 | MS.gene058119:CDS |
| TATTACTCACAGCACAGTGG+TGG | 0.685056 | 5.4:-3122064 | MS.gene058119:CDS |
| TAGACGTAGTAATTTGCGTG+TGG | 0.689667 | 5.4:-3121894 | MS.gene058119:CDS |
| AGTGGTTGTTGTTGGAACAA+CGG | 0.703604 | 5.4:-3122613 | MS.gene058119:CDS |
| AAGGGAATTTATCAAACACG+GGG | 0.703962 | 5.4:-3122302 | MS.gene058119:CDS |
| ATATGGAAGAGAAGGTGCGG+AGG | 0.709050 | 5.4:+3124256 | None:intergenic |
| TGTTTGGAACAGCAATGTGA+TGG | 0.709746 | 5.4:-3123142 | MS.gene058119:CDS |
| TTGCAGTATATGAGACAATG+GGG | 0.725300 | 5.4:-3121803 | MS.gene058119:CDS |
| ATATATTACTCACAGCACAG+TGG | 0.799299 | 5.4:-3122067 | MS.gene058119:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATATAATGAATAAAAAAA+TGG | + | chr5.4:3121859-3121878 | None:intergenic | 10.0% |
| !! | AATTTACTTGACTATTATTT+AGG | - | chr5.4:3122446-3122465 | MS.gene058119:CDS | 15.0% |
| !! | GTGGTAATTAATTAATTAAA+AGG | + | chr5.4:3122007-3122026 | None:intergenic | 15.0% |
| !! | TCTTCTAATCAAATTAAATA+TGG | - | chr5.4:3122530-3122549 | MS.gene058119:CDS | 15.0% |
| !!! | TTTGAATCATAAACAATTTT+AGG | + | chr5.4:3124180-3124199 | None:intergenic | 15.0% |
| !! | AAAATGAAACCTTTATTGAT+TGG | + | chr5.4:3122564-3122583 | None:intergenic | 20.0% |
| !! | AACAATAACTTGATTAGAAA+AGG | + | chr5.4:3122692-3122711 | None:intergenic | 20.0% |
| !! | ACAATAACTTGATTAGAAAA+GGG | + | chr5.4:3122691-3122710 | None:intergenic | 20.0% |
| !! | AGTAACAAATTTCTTCTAAT+CGG | - | chr5.4:3122337-3122356 | MS.gene058119:CDS | 20.0% |
| !! | AGTCAAGTAAATTATAAGAA+AGG | + | chr5.4:3122439-3122458 | None:intergenic | 20.0% |
| !! | CAACTAATTTCATCTAAATT+AGG | + | chr5.4:3123169-3123188 | None:intergenic | 20.0% |
| !! | GTTAATTTACCAATCAATAA+AGG | - | chr5.4:3122552-3122571 | MS.gene058119:CDS | 20.0% |
| !! | TATGAATTAGAGTATATTGA+TGG | - | chr5.4:3123931-3123950 | MS.gene058119:intron | 20.0% |
| !!! | ATTTAATTTGATTAGAAGAC+AGG | + | chr5.4:3122529-3122548 | None:intergenic | 20.0% |
| !!! | GTAATTATTTTACTGATTAC+AGG | - | chr5.4:3122722-3122741 | MS.gene058119:CDS | 20.0% |
| ! | AAAGAGAAAAATAACTGGAT+TGG | - | chr5.4:3124315-3124334 | MS.gene058119:CDS | 25.0% |
| ! | AGTTAAATTGCTTAGAAGAA+AGG | + | chr5.4:3122604-3122623 | None:intergenic | 25.0% |
| ! | ATACTAGTGTATAATCAAGA+GGG | + | chr5.4:3123021-3123040 | None:intergenic | 25.0% |
| ! | ATTGTATACGCATCAAAAAA+TGG | - | chr5.4:3123964-3123983 | MS.gene058119:intron | 25.0% |
| ! | CAAGTTATTGTTTATATGTC+TGG | - | chr5.4:3122700-3122719 | MS.gene058119:CDS | 25.0% |
| ! | GATTGATATTTCTTCTTATC+TGG | - | chr5.4:3122649-3122668 | MS.gene058119:CDS | 25.0% |
| ! | GTAACAAATTTCTTCTAATC+GGG | - | chr5.4:3122338-3122357 | MS.gene058119:CDS | 25.0% |
| ! | TCCAAATGATAAAAGTAGAA+GGG | - | chr5.4:3123636-3123655 | MS.gene058119:intron | 25.0% |
| ! | TCTTCAAAATCAAGTTAACA+TGG | + | chr5.4:3122094-3122113 | None:intergenic | 25.0% |
| ! | TTCCAAATGATAAAAGTAGA+AGG | - | chr5.4:3123635-3123654 | MS.gene058119:intron | 25.0% |
| ! | TTGACTATTATTTAGGTCAT+TGG | - | chr5.4:3122453-3122472 | MS.gene058119:CDS | 25.0% |
| !! | AATTCACGAATTTCCATTTT+GGG | - | chr5.4:3123252-3123271 | MS.gene058119:intron | 25.0% |
| !! | TAATTCACGAATTTCCATTT+TGG | - | chr5.4:3123251-3123270 | MS.gene058119:intron | 25.0% |
| !! | TCTTCTAAGCAATTTAACTT+TGG | - | chr5.4:3122605-3122624 | MS.gene058119:CDS | 25.0% |
| !! | TTTAACTTTGGTTAAGTCAT+TGG | - | chr5.4:3122617-3122636 | MS.gene058119:CDS | 25.0% |
| !! | TTTTAAACTCTCTTCCTTTA+AGG | - | chr5.4:3124217-3124236 | MS.gene058119:CDS | 25.0% |
| !!! | ATCCAGTTATTTTTCTCTTT+TGG | + | chr5.4:3124315-3124334 | None:intergenic | 25.0% |
| AAAAACCAATCAACAGAAGA+AGG | + | chr5.4:3123502-3123521 | None:intergenic | 30.0% | |
| AAATTCTTCAAACACACAAC+AGG | + | chr5.4:3123379-3123398 | None:intergenic | 30.0% | |
| AATGAACTTCTAAGCCTTAA+AGG | + | chr5.4:3124234-3124253 | None:intergenic | 30.0% | |
| ACTATAGTTCATCAGATTAG+AGG | + | chr5.4:3122499-3122518 | None:intergenic | 30.0% | |
| AGAAACCAATCAACTTAACT+AGG | - | chr5.4:3122111-3122130 | MS.gene058119:CDS | 30.0% | |
| AGAAGGGAATTTATCAAACA+CGG | - | chr5.4:3123652-3123671 | MS.gene058119:intron | 30.0% | |
| ATGGTTGCTAATGTTATATG+AGG | + | chr5.4:3122975-3122994 | None:intergenic | 30.0% | |
| ATTCCAAATTTGAGAGTAGA+AGG | + | chr5.4:3123775-3123794 | None:intergenic | 30.0% | |
| CATACTAGTGTATAATCAAG+AGG | + | chr5.4:3123022-3123041 | None:intergenic | 30.0% | |
| CATCTAAATTAGGCTTCTTA+CGG | + | chr5.4:3123159-3123178 | None:intergenic | 30.0% | |
| CTAGAACATTAACATAGCAA+AGG | + | chr5.4:3121938-3121957 | None:intergenic | 30.0% | |
| CTCTTGATTATACACTAGTA+TGG | - | chr5.4:3123020-3123039 | MS.gene058119:CDS | 30.0% | |
| GTTAACTATGTTTAGGTCAT+CGG | - | chr5.4:3122360-3122379 | MS.gene058119:CDS | 30.0% | |
| GTTGTTATAGTTATACCTTG+AGG | + | chr5.4:3121835-3121854 | None:intergenic | 30.0% | |
| TAATCGGGTTAACTATGTTT+AGG | - | chr5.4:3122353-3122372 | MS.gene058119:CDS | 30.0% | |
| TCGATAAGATAGTAATCATG+AGG | + | chr5.4:3122063-3122082 | None:intergenic | 30.0% | |
| TTAAGGCTTAGAAGTTCATT+TGG | - | chr5.4:3124234-3124253 | MS.gene058119:CDS | 30.0% | |
| TTCACTTGATTACTTTACTG+TGG | - | chr5.4:3122157-3122176 | MS.gene058119:CDS | 30.0% | |
| TTGTTTGTTTGATGTGAACT+GGG | - | chr5.4:3122190-3122209 | MS.gene058119:CDS | 30.0% | |
| TTTGTTTGTTTGATGTGAAC+TGG | - | chr5.4:3122189-3122208 | MS.gene058119:CDS | 30.0% | |
| ! | AAGAAGAAGATGATGATGAT+CGG | + | chr5.4:3121773-3121792 | None:intergenic | 30.0% |
| ! | TGATTTAACCATAGTCTTGA+GGG | + | chr5.4:3122274-3122293 | None:intergenic | 30.0% |
| ! | TTGATTTAACCATAGTCTTG+AGG | + | chr5.4:3122275-3122294 | None:intergenic | 30.0% |
| ! | TTTAGGTCATTGGTTAACAA+AGG | - | chr5.4:3122463-3122482 | MS.gene058119:CDS | 30.0% |
| ! | TTTTGACGATCCTTGTATAT+AGG | + | chr5.4:3124016-3124035 | None:intergenic | 30.0% |
| !! | GTAATCCTAGTTAAGTTGAT+TGG | + | chr5.4:3122119-3122138 | None:intergenic | 30.0% |
| !! | TATTTTACTGATTACAGGAC+AGG | - | chr5.4:3122727-3122746 | MS.gene058119:CDS | 30.0% |
| !! | TCCCTTCTACTTTTATCATT+TGG | + | chr5.4:3123640-3123659 | None:intergenic | 30.0% |
| !!! | GTTGATTGGTTTTTCAACAA+TGG | - | chr5.4:3123508-3123527 | MS.gene058119:intron | 30.0% |
| !!! | TGGATTTTTTGTCCTTTCAA+TGG | - | chr5.4:3123748-3123767 | MS.gene058119:intron | 30.0% |
| AAGGGAATTTATCAAACACG+GGG | - | chr5.4:3123654-3123673 | MS.gene058119:intron | 35.0% | |
| ACGGTAAGGTTCACATTTAT+CGG | + | chr5.4:3123209-3123228 | None:intergenic | 35.0% | |
| AGGAAAAAAGCAGTTGCATT+TGG | + | chr5.4:3121734-3121753 | None:intergenic | 35.0% | |
| ATACAAGGATCGTCAAAACT+TGG | - | chr5.4:3124018-3124037 | MS.gene058119:intron | 35.0% | |
| ATATATTACTCACAGCACAG+TGG | - | chr5.4:3123889-3123908 | MS.gene058119:intron | 35.0% | |
| ATGTTGTGAAAGAACCTCAA+TGG | - | chr5.4:3124130-3124149 | MS.gene058119:intron | 35.0% | |
| ATTGTTGCAGCTGAGTATTT+AGG | - | chr5.4:3124105-3124124 | MS.gene058119:intron | 35.0% | |
| ATTTATCAAACACGGGGATT+TGG | - | chr5.4:3123660-3123679 | MS.gene058119:intron | 35.0% | |
| CAAAACTTGGAATTGGTATC+AGG | - | chr5.4:3124031-3124050 | MS.gene058119:intron | 35.0% | |
| CAACCACTTTAATCAATCTG+AGG | - | chr5.4:3121638-3121657 | MS.gene058119:CDS | 35.0% | |
| CTGGATGAAAGAAAACAGTA+GGG | + | chr5.4:3123465-3123484 | None:intergenic | 35.0% | |
| CTTCGAATAAGTAACTTCAC+TGG | - | chr5.4:3123853-3123872 | MS.gene058119:intron | 35.0% | |
| CTTTCACAGACATTGTAATG+TGG | - | chr5.4:3123728-3123747 | MS.gene058119:intron | 35.0% | |
| GAAGGGAATTTATCAAACAC+GGG | - | chr5.4:3123653-3123672 | MS.gene058119:intron | 35.0% | |
| GCAGAAAAGAGAAATTTGAG+TGG | + | chr5.4:3122026-3122045 | None:intergenic | 35.0% | |
| GGCCAAAAGAGAAAAATAAC+TGG | - | chr5.4:3124310-3124329 | MS.gene058119:CDS | 35.0% | |
| GTTCCTCAGATTGATTAAAG+TGG | + | chr5.4:3121644-3121663 | None:intergenic | 35.0% | |
| GTTGCAGTATATGAGACAAT+GGG | - | chr5.4:3124152-3124171 | MS.gene058119:CDS | 35.0% | |
| GTTGCATTCTATAAACCAGT+GGG | - | chr5.4:3122854-3122873 | MS.gene058119:CDS | 35.0% | |
| TCTGGATGAAAGAAAACAGT+AGG | + | chr5.4:3123466-3123485 | None:intergenic | 35.0% | |
| TGCATACTTCAATTTCACCA+AGG | + | chr5.4:3122775-3122794 | None:intergenic | 35.0% | |
| TGGTGAACATATAGGTGATT+GGG | - | chr5.4:3123819-3123838 | MS.gene058119:intron | 35.0% | |
| TGTTGCATTCTATAAACCAG+TGG | - | chr5.4:3122853-3122872 | MS.gene058119:CDS | 35.0% | |
| TTCCAGCATCAAGTAATGTA+CGG | + | chr5.4:3123228-3123247 | None:intergenic | 35.0% | |
| TTGCAGTATATGAGACAATG+GGG | - | chr5.4:3124153-3124172 | MS.gene058119:CDS | 35.0% | |
| TTGGTGAACATATAGGTGAT+TGG | - | chr5.4:3123818-3123837 | MS.gene058119:intron | 35.0% | |
| TTTGTTTAGAAAGCTTCCTG+TGG | - | chr5.4:3124260-3124279 | MS.gene058119:CDS | 35.0% | |
| ! | AAGGTTCACATTTATCGGTT+AGG | + | chr5.4:3123204-3123223 | None:intergenic | 35.0% |
| ! | AGCATGTCTTTTAGCAAAGT+TGG | - | chr5.4:3123799-3123818 | MS.gene058119:intron | 35.0% |
| ! | AGTGTTGAGAGAAAAAGTGT+TGG | + | chr5.4:3121797-3121816 | None:intergenic | 35.0% |
| ! | ATAATCAAGAGGGTTTTCCA+AGG | + | chr5.4:3123011-3123030 | None:intergenic | 35.0% |
| ! | TACTGTTTTCTTTCATCCAG+AGG | - | chr5.4:3123465-3123484 | MS.gene058119:intron | 35.0% |
| ! | TAGAATGCAACAGCTTTTCT+TGG | + | chr5.4:3122845-3122864 | None:intergenic | 35.0% |
| ! | TCACAAAGTTTGAGACTGTT+TGG | - | chr5.4:3122798-3122817 | MS.gene058119:CDS | 35.0% |
| !! | AGCAAAGTTGGTGAACATAT+AGG | - | chr5.4:3123811-3123830 | MS.gene058119:intron | 35.0% |
| !! | GAACAAATGATGGGGAATTT+TGG | - | chr5.4:3123605-3123624 | MS.gene058119:intron | 35.0% |
| !! | GTGTTGAGAGAAAAAGTGTT+GGG | + | chr5.4:3121796-3121815 | None:intergenic | 35.0% |
| !! | TTGATTCTGCTGCTTACTTT+TGG | - | chr5.4:3123080-3123099 | MS.gene058119:CDS | 35.0% |
| !!! | ACGAATTTCCATTTTGGGTT+TGG | - | chr5.4:3123257-3123276 | MS.gene058119:intron | 35.0% |
| AAACACCCTTTCGGTACAAA+AGG | + | chr5.4:3123537-3123556 | None:intergenic | 40.0% | |
| AACACCCTTTCGGTACAAAA+GGG | + | chr5.4:3123536-3123555 | None:intergenic | 40.0% | |
| AACCTAGCTACAAGCCTTTA+TGG | - | chr5.4:3122915-3122934 | MS.gene058119:CDS | 40.0% | |
| AAGAAAGAAAATCGCCATGC+CGG | - | chr5.4:3123057-3123076 | MS.gene058119:CDS | 40.0% | |
| AAGTAAGCAGCAGAATCAAC+CGG | + | chr5.4:3123079-3123098 | None:intergenic | 40.0% | |
| ACCTAGCTACAAGCCTTTAT+GGG | - | chr5.4:3122916-3122935 | MS.gene058119:CDS | 40.0% | |
| ACTTGCCTTCTTCTGTTGAT+TGG | - | chr5.4:3123494-3123513 | MS.gene058119:intron | 40.0% | |
| AGAGTAGAAGGTCCATTGAA+AGG | + | chr5.4:3123763-3123782 | None:intergenic | 40.0% | |
| AGTAAAGAACCCGTAACACT+TGG | + | chr5.4:3121666-3121685 | None:intergenic | 40.0% | |
| ATCTGAGGAACCAAGTGTTA+CGG | - | chr5.4:3121653-3121672 | MS.gene058119:CDS | 40.0% | |
| CATCCTGGAACCTATATACA+AGG | - | chr5.4:3124003-3124022 | MS.gene058119:intron | 40.0% | |
| CCATAACAAATTACCAGCCT+TGG | - | chr5.4:3122991-3123010 | MS.gene058119:CDS | 40.0% | |
| CTAGTATGGTGCACTAATTC+AGG | - | chr5.4:3123034-3123053 | MS.gene058119:CDS | 40.0% | |
| CTCAAACTCCAAACCCAAAA+TGG | + | chr5.4:3123268-3123287 | None:intergenic | 40.0% | |
| CTCATATACTGCAACCATTG+AGG | + | chr5.4:3124147-3124166 | None:intergenic | 40.0% | |
| GAAGGCAAGTAAATTTCCTC+TGG | + | chr5.4:3123484-3123503 | None:intergenic | 40.0% | |
| GATCCTTGTATATAGGTTCC+AGG | + | chr5.4:3124009-3124028 | None:intergenic | 40.0% | |
| GCAAGTACAAAACCCCATAA+AGG | + | chr5.4:3122932-3122951 | None:intergenic | 40.0% | |
| GCATCAAGTAATGTACGGTA+AGG | + | chr5.4:3123223-3123242 | None:intergenic | 40.0% | |
| GCTCTATAAGCGCATGTATT+TGG | + | chr5.4:3123435-3123454 | None:intergenic | 40.0% | |
| GGACCTTCTACTCTCAAATT+TGG | - | chr5.4:3123769-3123788 | MS.gene058119:intron | 40.0% | |
| GGATCGTCAAAACTTGGAAT+TGG | - | chr5.4:3124024-3124043 | MS.gene058119:intron | 40.0% | |
| GGTTGCAGTATATGAGACAA+TGG | - | chr5.4:3124151-3124170 | MS.gene058119:CDS | 40.0% | |
| GTAACTTCACTGGAGAACTT+TGG | - | chr5.4:3123863-3123882 | MS.gene058119:intron | 40.0% | |
| GTATATAGGTTCCAGGATGA+GGG | + | chr5.4:3124002-3124021 | None:intergenic | 40.0% | |
| GTTCATGTGAAACCAGCATT+TGG | - | chr5.4:3123700-3123719 | MS.gene058119:intron | 40.0% | |
| TACCGTACATTACTTGATGC+TGG | - | chr5.4:3123223-3123242 | MS.gene058119:intron | 40.0% | |
| TGTATATAGGTTCCAGGATG+AGG | + | chr5.4:3124003-3124022 | None:intergenic | 40.0% | |
| TTTACTGCAGTGGTTGTTGT+TGG | - | chr5.4:3123335-3123354 | MS.gene058119:intron | 40.0% | |
| ! | ACTGGATTGGAGATGAAAGA+TGG | - | chr5.4:3124328-3124347 | MS.gene058119:CDS | 40.0% |
| ! | AGTGGTTGTTGTTGGAACAA+CGG | - | chr5.4:3123343-3123362 | MS.gene058119:intron | 40.0% |
| ! | ATGATGATGATCGGATGCAT+TGG | + | chr5.4:3121764-3121783 | None:intergenic | 40.0% |
| ! | CATGCGCTTATAGAGCATTA+TGG | - | chr5.4:3123439-3123458 | MS.gene058119:intron | 40.0% |
| ! | GAAGGTGGATCAAATTTTCC+CGG | - | chr5.4:3123577-3123596 | MS.gene058119:intron | 40.0% |
| ! | TAGACGTAGTAATTTGCGTG+TGG | - | chr5.4:3124062-3124081 | MS.gene058119:intron | 40.0% |
| ! | TAGGTTGACAATAGTGACCA+AGG | + | chr5.4:3122901-3122920 | None:intergenic | 40.0% |
| ! | TGATGATGATCGGATGCATT+GGG | + | chr5.4:3121763-3121782 | None:intergenic | 40.0% |
| ! | TGTTTGGAACAGCAATGTGA+TGG | - | chr5.4:3122814-3122833 | MS.gene058119:CDS | 40.0% |
| ! | TTTTTCTCTTTTGGCCCTGT+AGG | + | chr5.4:3124306-3124325 | None:intergenic | 40.0% |
| !! | CCAAGGCTGGTAATTTGTTA+TGG | + | chr5.4:3122994-3123013 | None:intergenic | 40.0% |
| AAAGCTCTCCCTCAAGACTA+TGG | - | chr5.4:3122263-3122282 | MS.gene058119:CDS | 45.0% | |
| AAGCTTCCTGTGGAACTGTA+TGG | - | chr5.4:3124270-3124289 | MS.gene058119:CDS | 45.0% | |
| AATGTTGTGTCTGACACGCA+TGG | + | chr5.4:3121897-3121916 | None:intergenic | 45.0% | |
| ACAGCACAGTGGTGGTAAAT+GGG | - | chr5.4:3123900-3123919 | MS.gene058119:intron | 45.0% | |
| ACCGTGGTATGTTAGGGAAA+GGG | - | chr5.4:3123296-3123315 | MS.gene058119:intron | 45.0% | |
| AGACTAATCGCTTGAGGTAG+TGG | - | chr5.4:3122235-3122254 | MS.gene058119:CDS | 45.0% | |
| AGCATATGGAAGAGAAGGTG+CGG | + | chr5.4:3121706-3121725 | None:intergenic | 45.0% | |
| AGCGAAGCATATGGAAGAGA+AGG | + | chr5.4:3121711-3121730 | None:intergenic | 45.0% | |
| ATGATCGGATGCATTGGGTT+TGG | + | chr5.4:3121758-3121777 | None:intergenic | 45.0% | |
| CATGTGAAACCAGCATTTGG+TGG | - | chr5.4:3123703-3123722 | MS.gene058119:intron | 45.0% | |
| CCAAGGATGTGAAATCCATC+TGG | + | chr5.4:3122884-3122903 | None:intergenic | 45.0% | |
| CCTAGCTACAAGCCTTTATG+GGG | - | chr5.4:3122917-3122936 | MS.gene058119:CDS | 45.0% | |
| CTGTAGAGACTAATCGCTTG+AGG | - | chr5.4:3122229-3122248 | MS.gene058119:CDS | 45.0% | |
| GACTAATCGCTTGAGGTAGT+GGG | - | chr5.4:3122236-3122255 | MS.gene058119:CDS | 45.0% | |
| GCATGTATTTGGTCGATCCA+CGG | + | chr5.4:3123424-3123443 | None:intergenic | 45.0% | |
| GTGAAAGTTCCACCAAATGC+TGG | + | chr5.4:3123715-3123734 | None:intergenic | 45.0% | |
| GTTATACCTTGAGGCCATTG+AGG | + | chr5.4:3121826-3121845 | None:intergenic | 45.0% | |
| TAGGGAAAGGGGTTTCAGTA+GGG | - | chr5.4:3123308-3123327 | MS.gene058119:intron | 45.0% | |
| TATTACTCACAGCACAGTGG+TGG | - | chr5.4:3123892-3123911 | MS.gene058119:intron | 45.0% | |
| TCAACACTCCTCTTCCTCAA+TGG | - | chr5.4:3121809-3121828 | MS.gene058119:CDS | 45.0% | |
| TCAACCTCCTGAAGGTTACA+AGG | - | chr5.4:3123108-3123127 | MS.gene058119:CDS | 45.0% | |
| TCTGAGGAACCAAGTGTTAC+GGG | - | chr5.4:3121654-3121673 | MS.gene058119:CDS | 45.0% | |
| TTACAAGGCTCTTGGCTACT+TGG | - | chr5.4:3123123-3123142 | MS.gene058119:CDS | 45.0% | |
| TTAGGGAAAGGGGTTTCAGT+AGG | - | chr5.4:3123307-3123326 | MS.gene058119:intron | 45.0% | |
| TTGGAACAGCAATGTGATGG+TGG | - | chr5.4:3122817-3122836 | MS.gene058119:CDS | 45.0% | |
| TTGTAACCTTCAGGAGGTTG+AGG | + | chr5.4:3123109-3123128 | None:intergenic | 45.0% | |
| ! | ACAGGACAGGATTTTGCTTC+TGG | - | chr5.4:3122740-3122759 | MS.gene058119:CDS | 45.0% |
| ! | CCAGATGGATTTCACATCCT+TGG | - | chr5.4:3122881-3122900 | MS.gene058119:CDS | 45.0% |
| ! | GTAGGGACTTTTTACTGCAG+TGG | - | chr5.4:3123325-3123344 | MS.gene058119:intron | 45.0% |
| ! | TGCATTTGGAGCGAAGCATA+TGG | + | chr5.4:3121720-3121739 | None:intergenic | 45.0% |
| !! | GCTTCTGGAATTGTGAACCT+TGG | - | chr5.4:3122755-3122774 | MS.gene058119:CDS | 45.0% |
| !! | TTGTACCGAAAGGGTGTTTC+TGG | - | chr5.4:3123538-3123557 | MS.gene058119:intron | 45.0% |
| AATCCATCTGGTACTCCCAC+TGG | + | chr5.4:3122872-3122891 | None:intergenic | 50.0% | |
| ATGGTGAGGAAGGTCCTACA+GGG | - | chr5.4:3124289-3124308 | MS.gene058119:CDS | 50.0% | |
| CACAGCACAGTGGTGGTAAA+TGG | - | chr5.4:3123899-3123918 | MS.gene058119:intron | 50.0% | |
| CATGCAAGTTACCCTCATCC+TGG | - | chr5.4:3123988-3124007 | MS.gene058119:intron | 50.0% | |
| CCATCATTTGTTCCTCCACC+GGG | + | chr5.4:3123598-3123617 | None:intergenic | 50.0% | |
| CCCATCATTTGTTCCTCCAC+CGG | + | chr5.4:3123599-3123618 | None:intergenic | 50.0% | |
| CCCCATAAAGGCTTGTAGCT+AGG | + | chr5.4:3122920-3122939 | None:intergenic | 50.0% | |
| CCCCTTTCCCTAACATACCA+CGG | + | chr5.4:3123300-3123319 | None:intergenic | 50.0% | |
| CCGGTGGAGGAACAAATGAT+GGG | - | chr5.4:3123596-3123615 | MS.gene058119:intron | 50.0% | |
| CCGTGGTATGTTAGGGAAAG+GGG | - | chr5.4:3123297-3123316 | MS.gene058119:intron | 50.0% | |
| CCTAACATACCACGGTCACA+GGG | + | chr5.4:3123292-3123311 | None:intergenic | 50.0% | |
| CCTGAAGGTTACAAGGCTCT+TGG | - | chr5.4:3123115-3123134 | MS.gene058119:CDS | 50.0% | |
| CCTGTGACCGTGGTATGTTA+GGG | - | chr5.4:3123290-3123309 | MS.gene058119:intron | 50.0% | |
| CGGTGGAGGAACAAATGATG+GGG | - | chr5.4:3123597-3123616 | MS.gene058119:intron | 50.0% | |
| GACCGTGGTATGTTAGGGAA+AGG | - | chr5.4:3123295-3123314 | MS.gene058119:intron | 50.0% | |
| GTCTCTACAGCTGCATGCAA+AGG | + | chr5.4:3122219-3122238 | None:intergenic | 50.0% | |
| GTGGAACTGTATGGTGAGGA+AGG | - | chr5.4:3124279-3124298 | MS.gene058119:CDS | 50.0% | |
| TATGGTGAGGAAGGTCCTAC+AGG | - | chr5.4:3124288-3124307 | MS.gene058119:CDS | 50.0% | |
| TCCTCACCATACAGTTCCAC+AGG | + | chr5.4:3124279-3124298 | None:intergenic | 50.0% | |
| TCCTGTGGAACTGTATGGTG+AGG | - | chr5.4:3124275-3124294 | MS.gene058119:CDS | 50.0% | |
| TCGGATGCATTGGGTTTGGA+AGG | + | chr5.4:3121754-3121773 | None:intergenic | 50.0% | |
| ! | AGAGCCTTGTAACCTTCAGG+AGG | + | chr5.4:3123115-3123134 | None:intergenic | 50.0% |
| ! | ATATGGAAGAGAAGGTGCGG+AGG | + | chr5.4:3121703-3121722 | None:intergenic | 50.0% |
| ! | CCAAGAGCCTTGTAACCTTC+AGG | + | chr5.4:3123118-3123137 | None:intergenic | 50.0% |
| ! | GGAGCCCTTTTGTACCGAAA+GGG | - | chr5.4:3123529-3123548 | MS.gene058119:intron | 50.0% |
| ! | GGATCAAATTTTCCCGGTGG+AGG | - | chr5.4:3123583-3123602 | MS.gene058119:intron | 50.0% |
| ! | GGTGGATCAAATTTTCCCGG+TGG | - | chr5.4:3123580-3123599 | MS.gene058119:intron | 50.0% |
| ! | TCAAGAGGGTTTTCCAAGGC+TGG | + | chr5.4:3123007-3123026 | None:intergenic | 50.0% |
| ! | TGGAGCCCTTTTGTACCGAA+AGG | - | chr5.4:3123528-3123547 | MS.gene058119:intron | 50.0% |
| !! | AAACCAGTGGGAGTACCAGA+TGG | - | chr5.4:3122866-3122885 | MS.gene058119:CDS | 50.0% |
| !! | TAATCGCTTGAGGTAGTGGG+TGG | - | chr5.4:3122239-3122258 | MS.gene058119:CDS | 50.0% |
| !! | TACCGAAAGGGTGTTTCTGG+AGG | - | chr5.4:3123541-3123560 | MS.gene058119:intron | 50.0% |
| AGCAGCAGAATCAACCGGCA+TGG | + | chr5.4:3123074-3123093 | None:intergenic | 55.0% | |
| CAACGCTATCAGCAATGCCG+TGG | - | chr5.4:3123404-3123423 | MS.gene058119:intron | 55.0% | |
| CCCGGTGGAGGAACAAATGA+TGG | - | chr5.4:3123595-3123614 | MS.gene058119:intron | 55.0% | |
| CCCTAACATACCACGGTCAC+AGG | + | chr5.4:3123293-3123312 | None:intergenic | 55.0% | |
| CCCTGTGACCGTGGTATGTT+AGG | - | chr5.4:3123289-3123308 | MS.gene058119:intron | 55.0% | |
| CCTCTTCCTCAATGGCCTCA+AGG | - | chr5.4:3121817-3121836 | MS.gene058119:CDS | 55.0% | |
| CCTTGAGGCCATTGAGGAAG+AGG | + | chr5.4:3121820-3121839 | None:intergenic | 55.0% | |
| CGCCTCCAGAAACACCCTTT+CGG | + | chr5.4:3123546-3123565 | None:intergenic | 55.0% | |
| GGAGGCGAGACTATCGATGA+AGG | - | chr5.4:3123559-3123578 | MS.gene058119:intron | 55.0% | |
| GGCGAGACTATCGATGAAGG+TGG | - | chr5.4:3123562-3123581 | MS.gene058119:intron | 55.0% | |
| TGGCTACCTCAACCTCCTGA+AGG | - | chr5.4:3123100-3123119 | MS.gene058119:CDS | 55.0% | |
| ! | AGTTTGAGACCCTGTGACCG+TGG | - | chr5.4:3123280-3123299 | MS.gene058119:intron | 55.0% |
| ! | CACGGCATTGCTGATAGCGT+TGG | + | chr5.4:3123406-3123425 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 3121625 | 3124353 | 3121625 | ID=MS.gene058119 |
| chr5.4 | mRNA | 3121625 | 3124353 | 3121625 | ID=MS.gene058119.t1;Parent=MS.gene058119 |
| chr5.4 | exon | 3124140 | 3124353 | 3124140 | ID=MS.gene058119.t1.exon1;Parent=MS.gene058119.t1 |
| chr5.4 | CDS | 3124140 | 3124353 | 3124140 | ID=cds.MS.gene058119.t1;Parent=MS.gene058119.t1 |
| chr5.4 | exon | 3121625 | 3123234 | 3121625 | ID=MS.gene058119.t1.exon2;Parent=MS.gene058119.t1 |
| chr5.4 | CDS | 3121625 | 3123234 | 3121625 | ID=cds.MS.gene058119.t1;Parent=MS.gene058119.t1 |
| Gene Sequence |
| Protein sequence |
