Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22273.t1 | XP_003610938.2 | 98.1 | 539 | 5 | 2 | 14 | 547 | 1 | 539 | 1.1e-309 | 1071.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22273.t1 | Q9ZNU6 | 77.6 | 535 | 104 | 3 | 16 | 547 | 2 | 523 | 3.6e-246 | 852.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22273.t1 | G7K971 | 98.1 | 539 | 5 | 2 | 14 | 547 | 1 | 539 | 8.2e-310 | 1071.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050168 | MS.gene22273 | 0.809582 | 1.76E-50 | -1.69E-46 |
MS.gene051860 | MS.gene22273 | 0.805659 | 1.20E-49 | -1.69E-46 |
MS.gene057639 | MS.gene22273 | 0.814766 | 1.30E-51 | -1.69E-46 |
MS.gene058142 | MS.gene22273 | 0.800115 | 1.68E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 104 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATACACATTCTTCAAATT+AGG | 0.141498 | 5.3:+2917487 | MS.gene22273:CDS |
CAGCAGGTGCATCATGAATT+TGG | 0.148535 | 5.3:-2917184 | None:intergenic |
TGTTAACTTGACCCATAATA+TGG | 0.162736 | 5.3:+2917413 | MS.gene22273:CDS |
ATTACGTTGATCTGATTATT+TGG | 0.209027 | 5.3:+2919045 | MS.gene22273:CDS |
CATTCATATTCCAGGGAATA+TGG | 0.217448 | 5.3:+2917854 | MS.gene22273:CDS |
TACATGGAGGGTAATCAATT+TGG | 0.221153 | 5.3:+2917140 | MS.gene22273:CDS |
AAATCACGTGCAGCCTAATA+TGG | 0.236617 | 5.3:+2917792 | MS.gene22273:CDS |
ACAAGAAGACACCCATATTA+TGG | 0.250665 | 5.3:-2917425 | None:intergenic |
ATCAAGAGTTGATTGTTTAT+AGG | 0.268678 | 5.3:+2916967 | MS.gene22273:CDS |
TCCTTGGCAGGTGCAATTCT+TGG | 0.269789 | 5.3:+2919201 | MS.gene22273:intron |
GGTTTCTGCTGAAACTTATA+AGG | 0.275889 | 5.3:-2916944 | None:intergenic |
TATACACATTCTTCAAATTA+GGG | 0.282871 | 5.3:+2917488 | MS.gene22273:CDS |
TTTCTCTGAGTTTGAATAGA+AGG | 0.287427 | 5.3:+2915928 | MS.gene22273:CDS |
TCGGCGATTCTATGAAAATT+TGG | 0.290527 | 5.3:+2916848 | MS.gene22273:CDS |
AAAACTTGTTCCGAAGTCTT+TGG | 0.299663 | 5.3:-2919007 | None:intergenic |
GAGAGAGCAAAGGGCAAAAT+TGG | 0.301131 | 5.3:-2921915 | None:intergenic |
CTTGTTGACGTTCGTGCTAT+TGG | 0.301845 | 5.3:+2917522 | MS.gene22273:CDS |
TTCCTTAAAATGAACTTGAT+TGG | 0.310912 | 5.3:-2921162 | None:intergenic |
ATTCTTCAAATTAGGGATTC+TGG | 0.313807 | 5.3:+2917495 | MS.gene22273:CDS |
TTGTTGACGTTCGTGCTATT+GGG | 0.314509 | 5.3:+2917523 | MS.gene22273:CDS |
TGCTGTTGGAGGAGCTGTCC+AGG | 0.326769 | 5.3:+2917202 | MS.gene22273:CDS |
CTCTGTGACTGACAGCTAAA+AGG | 0.332022 | 5.3:-2920391 | None:intergenic |
GACTTTGTTCTTGCAGCCTT+CGG | 0.339673 | 5.3:+2921947 | MS.gene22273:CDS |
ATTAAGTTTGGCAGCGTAGA+TGG | 0.349725 | 5.3:+2919241 | MS.gene22273:CDS |
CACCACTTGCTAATTAAGTT+TGG | 0.352258 | 5.3:+2919229 | MS.gene22273:CDS |
TATAAACAATCAACTCTTGA+TGG | 0.361899 | 5.3:-2916965 | None:intergenic |
ATTGCTTTCATTCATATTCC+AGG | 0.377196 | 5.3:+2917846 | MS.gene22273:CDS |
TCAAATTTAGGTCCTGAAGC+TGG | 0.385659 | 5.3:+2921846 | MS.gene22273:intron |
CGGTTGTAAATATTCACTTT+CGG | 0.386118 | 5.3:+2921967 | MS.gene22273:CDS |
AGGTCCTGAAGCTGGGAGTA+TGG | 0.391618 | 5.3:+2921854 | MS.gene22273:intron |
TGATTGTTTATAGGCCTAGA+TGG | 0.392331 | 5.3:+2916976 | MS.gene22273:CDS |
CTTCTTGTATGATGATCTAT+TGG | 0.394877 | 5.3:+2917440 | MS.gene22273:CDS |
AGCAGGTGCATCATGAATTT+GGG | 0.407016 | 5.3:-2917183 | None:intergenic |
CCATCCATACTCCCAGCTTC+AGG | 0.407698 | 5.3:-2921858 | None:intergenic |
CAAGAAGACACCCATATTAT+GGG | 0.433392 | 5.3:-2917424 | None:intergenic |
GTTAACTTGACCCATAATAT+GGG | 0.436025 | 5.3:+2917414 | MS.gene22273:CDS |
TACTGAAGACTTTCTTATCC+AGG | 0.437734 | 5.3:-2917383 | None:intergenic |
TATATGTTGTTTGAGCAGTT+TGG | 0.440396 | 5.3:+2920084 | MS.gene22273:CDS |
TTTCTTCATTCCATATTCCC+TGG | 0.440713 | 5.3:-2917864 | None:intergenic |
TAAAGATTTCTTTCTTTACA+TGG | 0.446690 | 5.3:+2917124 | MS.gene22273:CDS |
AATGGAAGATGGAGAGATCC+TGG | 0.457276 | 5.3:+2917365 | MS.gene22273:CDS |
AATCACGTGCAGCCTAATAT+GGG | 0.458268 | 5.3:+2917793 | MS.gene22273:CDS |
TTAAAATGAACTTGATTGGA+TGG | 0.458522 | 5.3:-2921158 | None:intergenic |
TGGACTGTTTGCCACTTCTA+CGG | 0.460981 | 5.3:+2917160 | MS.gene22273:CDS |
GATCAACGTAATCTTGAAAG+TGG | 0.464835 | 5.3:-2919034 | None:intergenic |
AATTTACGAAATGAATGGTC+TGG | 0.477507 | 5.3:-2916903 | None:intergenic |
ATTATATTTAGAATGGAAGA+TGG | 0.478790 | 5.3:+2917354 | MS.gene22273:intron |
AGCTTATTTCTGCAGCTGAT+CGG | 0.483287 | 5.3:+2921118 | MS.gene22273:intron |
TTATATACAGCAACAAAAGC+TGG | 0.488795 | 5.3:-2919910 | None:intergenic |
AGAACAGCTACGGAGCATAA+AGG | 0.489639 | 5.3:+2920185 | MS.gene22273:CDS |
AAAAGAGACTGGTCAAAGTA+AGG | 0.490331 | 5.3:-2920421 | None:intergenic |
ACCTCATATATTGTGTAACT+TGG | 0.492060 | 5.3:-2916873 | None:intergenic |
AGATGAGAAAGCACCTCAAA+AGG | 0.494033 | 5.3:-2917256 | None:intergenic |
CAAATTTAGGTCCTGAAGCT+GGG | 0.494504 | 5.3:+2921847 | MS.gene22273:intron |
GATTTCTTTCTTTACATGGA+GGG | 0.495054 | 5.3:+2917128 | MS.gene22273:CDS |
TTTCGTAAATTCACAGAGGA+TGG | 0.495680 | 5.3:+2916915 | MS.gene22273:CDS |
CAAGAACAAAGTCTGCTGTA+TGG | 0.507135 | 5.3:-2921937 | None:intergenic |
AGTAAACCTTATCATCAAAC+CGG | 0.511427 | 5.3:-2920444 | None:intergenic |
TGCTGTATGGAGAGAGCAAA+GGG | 0.511611 | 5.3:-2921924 | None:intergenic |
GCTACGGAGCATAAAGGATA+AGG | 0.511863 | 5.3:+2920191 | MS.gene22273:CDS |
CTGTGAATTTACGAAATGAA+TGG | 0.515785 | 5.3:-2916908 | None:intergenic |
TCCTTGACGTTACATGAAAG+TGG | 0.516018 | 5.3:-2920110 | None:intergenic |
CGTTGATCTGATTATTTGGA+AGG | 0.517396 | 5.3:+2919049 | MS.gene22273:CDS |
TGTTGACGTTCGTGCTATTG+GGG | 0.519492 | 5.3:+2917524 | MS.gene22273:CDS |
ATGAATTTGGGCCGTAGAAG+TGG | 0.522935 | 5.3:-2917171 | None:intergenic |
GCCAAGTTACACAATATATG+AGG | 0.525062 | 5.3:+2916872 | MS.gene22273:CDS |
ATTCATGATGCACCTGCTGT+TGG | 0.525370 | 5.3:+2917188 | MS.gene22273:CDS |
GCTGTTGGAGGAGCTGTCCA+GGG | 0.536533 | 5.3:+2917203 | MS.gene22273:CDS |
CATCAAACCGGAAAAGAGAC+TGG | 0.536809 | 5.3:-2920432 | None:intergenic |
TTGCTTTCATTCATATTCCA+GGG | 0.544596 | 5.3:+2917847 | MS.gene22273:CDS |
ATTACACTAGTGCCAGGAGC+AGG | 0.546692 | 5.3:-2916017 | None:intergenic |
GACTGGTCAAAGTAAGGAGA+AGG | 0.548689 | 5.3:-2920415 | None:intergenic |
CATGATGCACCTGCTGTTGG+AGG | 0.551452 | 5.3:+2917191 | MS.gene22273:CDS |
ATCTTAAACTTGAGAGTGTG+TGG | 0.552855 | 5.3:-2921189 | None:intergenic |
TGGACAGCTCCTCCAACAGC+AGG | 0.556623 | 5.3:-2917200 | None:intergenic |
ATTTACGAAATGAATGGTCT+GGG | 0.561474 | 5.3:-2916902 | None:intergenic |
ACCAGAGGATCCAAAGACTT+CGG | 0.562815 | 5.3:+2918997 | MS.gene22273:intron |
CCTGAAGCTGGGAGTATGGA+TGG | 0.565858 | 5.3:+2921858 | MS.gene22273:CDS |
GAAGTGATTACACTAGTGCC+AGG | 0.566048 | 5.3:-2916023 | None:intergenic |
CAAATTTGTACTCCTGCTCC+TGG | 0.569226 | 5.3:+2916005 | MS.gene22273:CDS |
AGTTTGGCAGCGTAGATGGA+GGG | 0.569913 | 5.3:+2919245 | MS.gene22273:CDS |
CTCAAGTTTAAGATCAAACC+AGG | 0.574816 | 5.3:+2921198 | MS.gene22273:CDS |
TAAGGCAAGCAATTCTTCAC+AGG | 0.575187 | 5.3:+2920209 | MS.gene22273:CDS |
GTTTGGCAGCGTAGATGGAG+GGG | 0.576590 | 5.3:+2919246 | MS.gene22273:CDS |
TGAAGAAACAGATGATACCT+TGG | 0.580472 | 5.3:+2917879 | MS.gene22273:CDS |
GCTTGCAGGTTCATCATGCT+CGG | 0.580715 | 5.3:+2916829 | MS.gene22273:intron |
TTCATGCACTAGAACAGCTA+CGG | 0.600561 | 5.3:+2920175 | MS.gene22273:CDS |
TATTGGCAATTGTATCACTT+CGG | 0.606826 | 5.3:+2917457 | MS.gene22273:CDS |
AAGTTTGGCAGCGTAGATGG+AGG | 0.610453 | 5.3:+2919244 | MS.gene22273:CDS |
ACTTAATTAGCAAGTGGTGT+CGG | 0.614406 | 5.3:-2919225 | None:intergenic |
TGCCAAACTTAATTAGCAAG+TGG | 0.620048 | 5.3:-2919231 | None:intergenic |
CTGACAGCTAAAAGGCAAAG+AGG | 0.622236 | 5.3:-2920383 | None:intergenic |
AAGTGAATATTTACAACCGA+AGG | 0.632142 | 5.3:-2921963 | None:intergenic |
ACCACTTTCATGTAACGTCA+AGG | 0.632278 | 5.3:+2920109 | MS.gene22273:CDS |
AGATTTCTTTCTTTACATGG+AGG | 0.632636 | 5.3:+2917127 | MS.gene22273:CDS |
CAATAGCACGAACGTCAACA+AGG | 0.638846 | 5.3:-2917521 | None:intergenic |
AGTTCATTGCAAGAAGCAAG+TGG | 0.641022 | 5.3:-2917095 | None:intergenic |
ATACAGCAACAAAAGCTGGA+TGG | 0.642705 | 5.3:-2919906 | None:intergenic |
ATCACGTGCAGCCTAATATG+GGG | 0.650041 | 5.3:+2917794 | MS.gene22273:CDS |
CTGCTGTATGGAGAGAGCAA+AGG | 0.653571 | 5.3:-2921925 | None:intergenic |
AAAGCAGCAATATTGCAGCT+CGG | 0.656385 | 5.3:+2915970 | MS.gene22273:CDS |
TTTCTATTGAAGGAACACCC+TGG | 0.658670 | 5.3:-2917220 | None:intergenic |
TTCATTTCGTAAATTCACAG+AGG | 0.686497 | 5.3:+2916911 | MS.gene22273:CDS |
TTAAACTTGAGAGTGTGTGG+AGG | 0.702251 | 5.3:-2921186 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAACTAAAAAAATCTAA+GGG | - | chr5.3:2916337-2916356 | None:intergenic | 10.0% |
!! | AAGAAAAATTCAAAATATAA+AGG | - | chr5.3:2917283-2917302 | None:intergenic | 10.0% |
!! | AAGAAAAAGAAACTAATATT+TGG | - | chr5.3:2918030-2918049 | None:intergenic | 15.0% |
!! | ACGATATAAGAAAAATTAAA+AGG | + | chr5.3:2920287-2920306 | MS.gene22273:intron | 15.0% |
!! | AGAAAAAGAAACTAATATTT+GGG | - | chr5.3:2918029-2918048 | None:intergenic | 15.0% |
!! | CAAAAAACTAAAAAAATCTA+AGG | - | chr5.3:2916338-2916357 | None:intergenic | 15.0% |
!! | TAATGTTCCTATATAATATT+TGG | - | chr5.3:2919401-2919420 | None:intergenic | 15.0% |
!! | TAGATATACAATTGTTAAAA+TGG | + | chr5.3:2921734-2921753 | MS.gene22273:intron | 15.0% |
!! | TGCAATTACAAAAATATATA+TGG | + | chr5.3:2916672-2916691 | MS.gene22273:intron | 15.0% |
!!! | AATTTTCATTTTATATGCTT+AGG | - | chr5.3:2919348-2919367 | None:intergenic | 15.0% |
!!! | ATTTTCATTTTATATGCTTA+GGG | - | chr5.3:2919347-2919366 | None:intergenic | 15.0% |
!!! | GTAAAAATTTCAGTTTTAAT+GGG | + | chr5.3:2920862-2920881 | MS.gene22273:intron | 15.0% |
!!! | TGTTCTTTTATCATATTAAT+AGG | + | chr5.3:2918514-2918533 | MS.gene22273:intron | 15.0% |
!!! | TTATTTTATGCTTCAAATTT+AGG | + | chr5.3:2921834-2921853 | MS.gene22273:intron | 15.0% |
!!! | TTTTAATTTTTCTTATATCG+TGG | - | chr5.3:2920288-2920307 | None:intergenic | 15.0% |
!!! | TTTTGTTTATAATAGAAAAC+CGG | + | chr5.3:2916604-2916623 | MS.gene22273:intron | 15.0% |
!! | AAAATCTACAATGTCATTAA+AGG | + | chr5.3:2917679-2917698 | MS.gene22273:intron | 20.0% |
!! | AATAAGGGAAATTATAGAAA+AGG | - | chr5.3:2918460-2918479 | None:intergenic | 20.0% |
!! | AATTACTCAATGAACATAAA+AGG | + | chr5.3:2916575-2916594 | MS.gene22273:intron | 20.0% |
!! | AGAATAATCAGTTTATGATT+TGG | - | chr5.3:2917329-2917348 | None:intergenic | 20.0% |
!! | ATATATTTGCAATTACAACT+TGG | + | chr5.3:2921571-2921590 | MS.gene22273:intron | 20.0% |
!! | ATGTAAGAAAAGTTAAAACT+TGG | - | chr5.3:2919551-2919570 | None:intergenic | 20.0% |
!! | ATTTATACAGAATGCAATAT+TGG | + | chr5.3:2918615-2918634 | MS.gene22273:intron | 20.0% |
!! | TAAAGATTTCTTTCTTTACA+TGG | + | chr5.3:2917124-2917143 | MS.gene22273:CDS | 20.0% |
!! | TATACACATTCTTCAAATTA+GGG | + | chr5.3:2917488-2917507 | MS.gene22273:CDS | 20.0% |
!! | TATGGTTTAAAAGATTACAA+AGG | - | chr5.3:2921050-2921069 | None:intergenic | 20.0% |
!! | TCTTCCATTCTAAATATAAT+AGG | - | chr5.3:2917354-2917373 | None:intergenic | 20.0% |
!! | TGAATTTATAAAACTAACCA+AGG | - | chr5.3:2917899-2917918 | None:intergenic | 20.0% |
!!! | AAAGTTATCTTTTCTATTGA+AGG | - | chr5.3:2917233-2917252 | None:intergenic | 20.0% |
!!! | AGTGTTATTAAATTGTTAGT+GGG | + | chr5.3:2920611-2920630 | MS.gene22273:intron | 20.0% |
!!! | ATTATATTTAGAATGGAAGA+TGG | + | chr5.3:2917354-2917373 | MS.gene22273:intron | 20.0% |
!!! | GATTTTTTTAGTTTTTTGCT+TGG | + | chr5.3:2916340-2916359 | MS.gene22273:intron | 20.0% |
!!! | GGTAAAAATTTCAGTTTTAA+TGG | + | chr5.3:2920861-2920880 | MS.gene22273:intron | 20.0% |
!!! | GTTAATTGTTATTCCTAAAT+TGG | - | chr5.3:2918319-2918338 | None:intergenic | 20.0% |
!!! | TGAAATTGTATCTTTTTATC+AGG | + | chr5.3:2919945-2919964 | MS.gene22273:CDS | 20.0% |
!!! | TGTAGATTTTTTAGTCAAAA+AGG | - | chr5.3:2917669-2917688 | None:intergenic | 20.0% |
!!! | TTCTTTTTCCATGTTTTATT+TGG | + | chr5.3:2917936-2917955 | MS.gene22273:intron | 20.0% |
!!! | TTTTAAGTACAGTTGAAAAA+TGG | + | chr5.3:2920919-2920938 | MS.gene22273:intron | 20.0% |
!!! | TTTTGCAATACTATAAAAGA+AGG | + | chr5.3:2918260-2918279 | MS.gene22273:intron | 20.0% |
!!! | TTTTTTCAATAGCTAAGATA+TGG | + | chr5.3:2916078-2916097 | MS.gene22273:intron | 20.0% |
! | AAAAAAGAATTCCCCATATT+AGG | - | chr5.3:2917808-2917827 | None:intergenic | 25.0% |
! | AAAAATGCAAAGCAGTAATT+AGG | - | chr5.3:2918832-2918851 | None:intergenic | 25.0% |
! | AAATCAAATCAATAGTGAGA+TGG | - | chr5.3:2919140-2919159 | None:intergenic | 25.0% |
! | AAATTAAAAGGCTATGTACA+TGG | + | chr5.3:2920299-2920318 | MS.gene22273:intron | 25.0% |
! | AAGATATACTGGAGAATTTA+TGG | + | chr5.3:2916263-2916282 | MS.gene22273:intron | 25.0% |
! | ACATTAGAGGTAGAAAAATA+AGG | + | chr5.3:2916405-2916424 | MS.gene22273:intron | 25.0% |
! | AGAAACACAAAAACTAAAGA+AGG | - | chr5.3:2918857-2918876 | None:intergenic | 25.0% |
! | ATATTGGATTGATATGGTAA+TGG | + | chr5.3:2920811-2920830 | MS.gene22273:intron | 25.0% |
! | ATTAAATTGTTAGTGGGATT+GGG | + | chr5.3:2920617-2920636 | MS.gene22273:intron | 25.0% |
! | ATTACGTTGATCTGATTATT+TGG | + | chr5.3:2919045-2919064 | MS.gene22273:CDS | 25.0% |
! | ATTCAATGAACCTAAAAAGT+GGG | - | chr5.3:2916516-2916535 | None:intergenic | 25.0% |
! | CACTAACAATTTAATAACAC+TGG | - | chr5.3:2920612-2920631 | None:intergenic | 25.0% |
! | CATTAGAGGTAGAAAAATAA+GGG | + | chr5.3:2916406-2916425 | MS.gene22273:intron | 25.0% |
! | CCAATAAGCAAAAAATTCTA+TGG | - | chr5.3:2921068-2921087 | None:intergenic | 25.0% |
! | CTAAGATATGGAATAGTTAA+TGG | + | chr5.3:2916090-2916109 | MS.gene22273:intron | 25.0% |
! | CTATACACATTCTTCAAATT+AGG | + | chr5.3:2917487-2917506 | MS.gene22273:CDS | 25.0% |
! | CTCACCTATTATATTTAGAA+TGG | + | chr5.3:2917347-2917366 | MS.gene22273:intron | 25.0% |
! | GCAAAAATTATATTCGATTC+AGG | - | chr5.3:2916795-2916814 | None:intergenic | 25.0% |
! | TATAAACAATCAACTCTTGA+TGG | - | chr5.3:2916968-2916987 | None:intergenic | 25.0% |
! | TATAAATTGAGATGCTTCTA+CGG | - | chr5.3:2918602-2918621 | None:intergenic | 25.0% |
! | TATTAAATTGTTAGTGGGAT+TGG | + | chr5.3:2920616-2920635 | MS.gene22273:intron | 25.0% |
! | TATTCAATGAACCTAAAAAG+TGG | - | chr5.3:2916517-2916536 | None:intergenic | 25.0% |
! | TATTGGATTGATATGGTAAT+GGG | + | chr5.3:2920812-2920831 | MS.gene22273:intron | 25.0% |
! | TGCTTATAATATTGATCAGA+AGG | - | chr5.3:2916489-2916508 | None:intergenic | 25.0% |
! | TTAAAATGAACTTGATTGGA+TGG | - | chr5.3:2921161-2921180 | None:intergenic | 25.0% |
! | TTCCTTAAAATGAACTTGAT+TGG | - | chr5.3:2921165-2921184 | None:intergenic | 25.0% |
!! | AGTTTATCTTTGAAGGATAT+AGG | + | chr5.3:2917990-2918009 | MS.gene22273:intron | 25.0% |
!! | ATCAAGAGTTGATTGTTTAT+AGG | + | chr5.3:2916967-2916986 | MS.gene22273:CDS | 25.0% |
!! | ATCCAATCAAGTTCATTTTA+AGG | + | chr5.3:2921160-2921179 | MS.gene22273:CDS | 25.0% |
!! | ATTTTTCTTATATCGTGGAA+AGG | - | chr5.3:2920283-2920302 | None:intergenic | 25.0% |
!! | CAGTGTTATTAAATTGTTAG+TGG | + | chr5.3:2920610-2920629 | MS.gene22273:intron | 25.0% |
!! | GAATCGAATATAATTTTTGC+AGG | + | chr5.3:2916795-2916814 | MS.gene22273:intron | 25.0% |
!! | TGATTGGTTAAAATTCACAT+GGG | + | chr5.3:2921302-2921321 | MS.gene22273:intron | 25.0% |
!! | TGATTGGTTAAAATTCACAT+GGG | - | chr5.3:2921321-2921302 | None:intergenic | 25.0% |
!! | TTGATTGGTTAAAATTCACA+TGG | + | chr5.3:2921301-2921320 | MS.gene22273:intron | 25.0% |
!! | TTGATTGGTTAAAATTCACA+TGG | - | chr5.3:2921320-2921301 | None:intergenic | 25.0% |
!! | TTTTCTTTTTATCTCTGACA+TGG | + | chr5.3:2918048-2918067 | MS.gene22273:intron | 25.0% |
!! | TTTTGTTGCTGTATATAACA+TGG | + | chr5.3:2919915-2919934 | MS.gene22273:CDS | 25.0% |
!!! | AGACATTCTAAAATCTGAAA+CGG | + | chr5.3:2918571-2918590 | MS.gene22273:intron | 25.0% |
!!! | ATGTGAATTTTAACCAATCA+AGG | - | chr5.3:2921367-2921348 | None:intergenic | 25.0% |
!!! | CCATAGAATTTTTTGCTTAT+TGG | + | chr5.3:2921065-2921084 | MS.gene22273:intron | 25.0% |
!!! | GCATTGATTAGAAAATTAAC+AGG | - | chr5.3:2921618-2921637 | None:intergenic | 25.0% |
!!! | TAAACTATTTTTCACTAGGT+GGG | - | chr5.3:2918743-2918762 | None:intergenic | 25.0% |
!!! | TTGTAGTTGTGTTTGATTTT+TGG | + | chr5.3:2918880-2918899 | MS.gene22273:intron | 25.0% |
!!! | TTTTTTAGTTTTTTGCTTGG+TGG | + | chr5.3:2916343-2916362 | MS.gene22273:intron | 25.0% |
AAACAGAGCCAAATAAAACA+TGG | - | chr5.3:2917947-2917966 | None:intergenic | 30.0% | |
AAAGCAGTAATTAGGAGAAA+CGG | - | chr5.3:2918824-2918843 | None:intergenic | 30.0% | |
AAGATATCTCATACCATGTT+AGG | + | chr5.3:2919683-2919702 | MS.gene22273:intron | 30.0% | |
AAGCAGTTAATCATGTTCAA+AGG | + | chr5.3:2918343-2918362 | MS.gene22273:intron | 30.0% | |
AAGTGAATATTTACAACCGA+AGG | - | chr5.3:2921966-2921985 | None:intergenic | 30.0% | |
AAGTGTATTAGCCAATATAG+AGG | + | chr5.3:2918649-2918668 | MS.gene22273:intron | 30.0% | |
AATCAATATGTGCTCTATTG+AGG | + | chr5.3:2919821-2919840 | MS.gene22273:intron | 30.0% | |
AATTTACGAAATGAATGGTC+TGG | - | chr5.3:2916906-2916925 | None:intergenic | 30.0% | |
ACCTCATATATTGTGTAACT+TGG | - | chr5.3:2916876-2916895 | None:intergenic | 30.0% | |
ACTGGAATATTGGATTGATA+TGG | + | chr5.3:2920805-2920824 | MS.gene22273:intron | 30.0% | |
ACTGGCTAAATCATATCATT+AGG | - | chr5.3:2919764-2919783 | None:intergenic | 30.0% | |
ACTTCAGATCAACAATTAGA+TGG | + | chr5.3:2916164-2916183 | MS.gene22273:intron | 30.0% | |
AGATATCTCATACCATGTTA+GGG | + | chr5.3:2919684-2919703 | MS.gene22273:intron | 30.0% | |
AGATTTCTTTCTTTACATGG+AGG | + | chr5.3:2917127-2917146 | MS.gene22273:CDS | 30.0% | |
AGCAGTTAATCATGTTCAAA+GGG | + | chr5.3:2918344-2918363 | MS.gene22273:intron | 30.0% | |
AGTAAACCTTATCATCAAAC+CGG | - | chr5.3:2920447-2920466 | None:intergenic | 30.0% | |
ATAAATTGAGATGCTTCTAC+GGG | - | chr5.3:2918601-2918620 | None:intergenic | 30.0% | |
ATATATATGGTGTGCTAGTT+TGG | + | chr5.3:2916685-2916704 | MS.gene22273:intron | 30.0% | |
ATGTTAGGGATAACTCTTAA+AGG | + | chr5.3:2919698-2919717 | MS.gene22273:intron | 30.0% | |
ATTCTTCAAATTAGGGATTC+TGG | + | chr5.3:2917495-2917514 | MS.gene22273:CDS | 30.0% | |
ATTGCTTTCATTCATATTCC+AGG | + | chr5.3:2917846-2917865 | MS.gene22273:CDS | 30.0% | |
ATTTACGAAATGAATGGTCT+GGG | - | chr5.3:2916905-2916924 | None:intergenic | 30.0% | |
CAATAATGATAGACTATGTG+GGG | - | chr5.3:2918488-2918507 | None:intergenic | 30.0% | |
CATTGAATAACTTATGCATC+TGG | + | chr5.3:2916528-2916547 | MS.gene22273:intron | 30.0% | |
CCAATAATGATAGACTATGT+GGG | - | chr5.3:2918489-2918508 | None:intergenic | 30.0% | |
CCACATAGTCTATCATTATT+GGG | + | chr5.3:2918487-2918506 | MS.gene22273:intron | 30.0% | |
CCATACACTTATTCATGTTT+AGG | - | chr5.3:2918545-2918564 | None:intergenic | 30.0% | |
CCTAAACATGAATAAGTGTA+TGG | + | chr5.3:2918542-2918561 | MS.gene22273:intron | 30.0% | |
CCTAGTGAAAAATAGTTTAG+TGG | + | chr5.3:2918744-2918763 | MS.gene22273:intron | 30.0% | |
CGGTTGTAAATATTCACTTT+CGG | + | chr5.3:2921967-2921986 | MS.gene22273:CDS | 30.0% | |
CTGTGAATTTACGAAATGAA+TGG | - | chr5.3:2916911-2916930 | None:intergenic | 30.0% | |
CTTCTTGTATGATGATCTAT+TGG | + | chr5.3:2917440-2917459 | MS.gene22273:CDS | 30.0% | |
GAAGTCTATATGACAGTATT+AGG | - | chr5.3:2918693-2918712 | None:intergenic | 30.0% | |
GAGATTTAATTATCCGAATG+TGG | + | chr5.3:2919629-2919648 | MS.gene22273:intron | 30.0% | |
GATACTGAAAACTGGAATAT+TGG | + | chr5.3:2920795-2920814 | MS.gene22273:intron | 30.0% | |
GATTTCTTTCTTTACATGGA+GGG | + | chr5.3:2917128-2917147 | MS.gene22273:CDS | 30.0% | |
GCACATTGTTTATTCAGTTA+AGG | - | chr5.3:2918394-2918413 | None:intergenic | 30.0% | |
GTTCTTCTTGTAAGATATAC+TGG | + | chr5.3:2916252-2916271 | MS.gene22273:intron | 30.0% | |
GTTTATAATAGAAAACCGGA+GGG | + | chr5.3:2916608-2916627 | MS.gene22273:intron | 30.0% | |
TAGACAAGTAAACTAGTATG+TGG | - | chr5.3:2920470-2920489 | None:intergenic | 30.0% | |
TATCCAATAGAGAACATTAG+AGG | + | chr5.3:2916392-2916411 | MS.gene22273:intron | 30.0% | |
TATTGGCAATTGTATCACTT+CGG | + | chr5.3:2917457-2917476 | MS.gene22273:CDS | 30.0% | |
TCCAAGGCCAAATATTATAT+AGG | + | chr5.3:2919391-2919410 | MS.gene22273:intron | 30.0% | |
TCCTATATAATATTTGGCCT+TGG | - | chr5.3:2919395-2919414 | None:intergenic | 30.0% | |
TCTTTGCTTTAACATGTTTC+AGG | + | chr5.3:2917966-2917985 | MS.gene22273:intron | 30.0% | |
TGTTTATAATAGAAAACCGG+AGG | + | chr5.3:2916607-2916626 | MS.gene22273:intron | 30.0% | |
TTAAATTGTTAGTGGGATTG+GGG | + | chr5.3:2920618-2920637 | MS.gene22273:intron | 30.0% | |
TTATATACAGCAACAAAAGC+TGG | - | chr5.3:2919913-2919932 | None:intergenic | 30.0% | |
TTCAGGAAGTTTATCTTTGA+AGG | + | chr5.3:2917983-2918002 | MS.gene22273:intron | 30.0% | |
TTCATTTCGTAAATTCACAG+AGG | + | chr5.3:2916911-2916930 | MS.gene22273:CDS | 30.0% | |
TTGCTTTCATTCATATTCCA+GGG | + | chr5.3:2917847-2917866 | MS.gene22273:CDS | 30.0% | |
TTGTATTGTTCCTTTGTTGA+AGG | + | chr5.3:2916767-2916786 | MS.gene22273:intron | 30.0% | |
TTTAAGAGTTATCCCTAACA+TGG | - | chr5.3:2919699-2919718 | None:intergenic | 30.0% | |
TTTCAGTATCATTGTTGCAA+AGG | - | chr5.3:2920785-2920804 | None:intergenic | 30.0% | |
TTTCTCTGAGTTTGAATAGA+AGG | + | chr5.3:2915928-2915947 | MS.gene22273:CDS | 30.0% | |
! | AAAAGCATATCAAAGTTGCA+TGG | - | chr5.3:2921793-2921812 | None:intergenic | 30.0% |
! | AAATTGAACCGAGTTTCTTT+TGG | + | chr5.3:2920744-2920763 | MS.gene22273:intron | 30.0% |
! | AACTTGGCATCAATTGTTTT+CGG | - | chr5.3:2919535-2919554 | None:intergenic | 30.0% |
! | AAGCATACATTTTGAATGCA+TGG | + | chr5.3:2918199-2918218 | MS.gene22273:intron | 30.0% |
! | AGATAACTTTTCACCTTTTG+AGG | + | chr5.3:2917243-2917262 | MS.gene22273:CDS | 30.0% |
! | AGCATACATTTTGAATGCAT+GGG | + | chr5.3:2918200-2918219 | MS.gene22273:intron | 30.0% |
! | ATCCTGTGTTTCATTTTCAT+GGG | + | chr5.3:2919982-2920001 | MS.gene22273:intron | 30.0% |
! | CTTATAACTGAAGTATCTAG+TGG | + | chr5.3:2919438-2919457 | MS.gene22273:intron | 30.0% |
! | CTTTTCAGTGTGTAAATTCA+TGG | + | chr5.3:2918949-2918968 | MS.gene22273:intron | 30.0% |
! | GACATTTTATGCATCTTAAC+TGG | + | chr5.3:2919083-2919102 | MS.gene22273:intron | 30.0% |
! | GTTAACTTGACCCATAATAT+GGG | + | chr5.3:2917414-2917433 | MS.gene22273:CDS | 30.0% |
! | TATATGTTGTTTGAGCAGTT+TGG | + | chr5.3:2920084-2920103 | MS.gene22273:CDS | 30.0% |
! | TCAATTGTTTTCGGTAAGTT+AGG | - | chr5.3:2919526-2919545 | None:intergenic | 30.0% |
! | TGAGTGTTATTATTACACCT+TGG | + | chr5.3:2918774-2918793 | MS.gene22273:intron | 30.0% |
! | TGATTTTCTACATTGTTCTC+TGG | - | chr5.3:2917778-2917797 | None:intergenic | 30.0% |
! | TGTTAACTTGACCCATAATA+TGG | + | chr5.3:2917413-2917432 | MS.gene22273:CDS | 30.0% |
! | TTGTCATGTTTAGAACATAG+AGG | - | chr5.3:2921419-2921438 | None:intergenic | 30.0% |
! | TTTGAGATCTTCAAAATCGA+AGG | + | chr5.3:2917303-2917322 | MS.gene22273:intron | 30.0% |
! | TTTTATACTGTCACTGCTTA+TGG | + | chr5.3:2918132-2918151 | MS.gene22273:intron | 30.0% |
! | TTTTCTCAATTCAAATGCTC+AGG | + | chr5.3:2917572-2917591 | MS.gene22273:CDS | 30.0% |
!! | AAACTATTTTTCACTAGGTG+GGG | - | chr5.3:2918742-2918761 | None:intergenic | 30.0% |
!! | AGTTTTAATGGGAAAAAGAG+GGG | + | chr5.3:2920873-2920892 | MS.gene22273:intron | 30.0% |
!! | CAGTTTTAATGGGAAAAAGA+GGG | + | chr5.3:2920872-2920891 | MS.gene22273:intron | 30.0% |
!! | CCACTAAACTATTTTTCACT+AGG | - | chr5.3:2918747-2918766 | None:intergenic | 30.0% |
!! | CTAAACTATTTTTCACTAGG+TGG | - | chr5.3:2918744-2918763 | None:intergenic | 30.0% |
!! | TATGTTTTAGATATGCAGAC+AGG | + | chr5.3:2916457-2916476 | MS.gene22273:intron | 30.0% |
!! | TCAGTTTTAATGGGAAAAAG+AGG | + | chr5.3:2920871-2920890 | MS.gene22273:intron | 30.0% |
!!! | ATGGGGAATTCTTTTTTAAG+TGG | + | chr5.3:2917811-2917830 | MS.gene22273:CDS | 30.0% |
!!! | CAGAATGCAATATTGGTTTT+TGG | + | chr5.3:2918622-2918641 | MS.gene22273:intron | 30.0% |
AAACAATTGACAACGTACCA+AGG | - | chr5.3:2918794-2918813 | None:intergenic | 35.0% | |
AAAGGCTTACAACTGTTAAG+TGG | + | chr5.3:2919716-2919735 | MS.gene22273:intron | 35.0% | |
AACCCATGAAAATGAAACAC+AGG | - | chr5.3:2919987-2920006 | None:intergenic | 35.0% | |
AAGCAGTGACAGTATAAAAC+AGG | - | chr5.3:2918131-2918150 | None:intergenic | 35.0% | |
ACAAGAAGACACCCATATTA+TGG | - | chr5.3:2917428-2917447 | None:intergenic | 35.0% | |
ACACTATTTAATACACCCTC+CGG | - | chr5.3:2916626-2916645 | None:intergenic | 35.0% | |
ACATAATCAGCTTGAACAAC+AGG | - | chr5.3:2921237-2921256 | None:intergenic | 35.0% | |
ACTAGAGATGCTTCCAATTT+AGG | + | chr5.3:2918303-2918322 | MS.gene22273:intron | 35.0% | |
ACTTAATTAGCAAGTGGTGT+CGG | - | chr5.3:2919228-2919247 | None:intergenic | 35.0% | |
AGCAGTGACAGTATAAAACA+GGG | - | chr5.3:2918130-2918149 | None:intergenic | 35.0% | |
AGGGTGTATTAAATAGTGTC+AGG | + | chr5.3:2916627-2916646 | MS.gene22273:intron | 35.0% | |
AGGTGTAATTTAATGCTTGC+AGG | + | chr5.3:2916815-2916834 | MS.gene22273:intron | 35.0% | |
AGTTAATCATGTTCAAAGGG+TGG | + | chr5.3:2918347-2918366 | MS.gene22273:intron | 35.0% | |
ATGATTTAGCCAGTAACAGT+GGG | + | chr5.3:2919770-2919789 | MS.gene22273:intron | 35.0% | |
ATGTAGTCCACTTTCTAATG+TGG | + | chr5.3:2921449-2921468 | MS.gene22273:intron | 35.0% | |
ATTATCCGAATGTGGTAACA+AGG | + | chr5.3:2919637-2919656 | MS.gene22273:intron | 35.0% | |
ATTCCATTAGAGGAGTTGTT+GGG | + | chr5.3:2917643-2917662 | MS.gene22273:intron | 35.0% | |
ATTCTGGCAGAATGTAAAGA+CGG | - | chr5.3:2920049-2920068 | None:intergenic | 35.0% | |
CAAGAAGACACCCATATTAT+GGG | - | chr5.3:2917427-2917446 | None:intergenic | 35.0% | |
CAGATCATTTGCCTCTATAT+TGG | - | chr5.3:2918663-2918682 | None:intergenic | 35.0% | |
CATAATCAGCTTGAACAACA+GGG | - | chr5.3:2921236-2921255 | None:intergenic | 35.0% | |
CATGAAAAAGAAAGCCATCT+AGG | - | chr5.3:2916993-2917012 | None:intergenic | 35.0% | |
CATTCATATTCCAGGGAATA+TGG | + | chr5.3:2917854-2917873 | MS.gene22273:CDS | 35.0% | |
CCCAATAATGATAGACTATG+TGG | - | chr5.3:2918490-2918509 | None:intergenic | 35.0% | |
CCCACATAGTCTATCATTAT+TGG | + | chr5.3:2918486-2918505 | MS.gene22273:intron | 35.0% | |
CGTTGATCTGATTATTTGGA+AGG | + | chr5.3:2919049-2919068 | MS.gene22273:CDS | 35.0% | |
CTACCTCTAATGTTCTCTAT+TGG | - | chr5.3:2916398-2916417 | None:intergenic | 35.0% | |
CTTGTTGAGTATTCCATTAG+AGG | + | chr5.3:2917633-2917652 | MS.gene22273:intron | 35.0% | |
GATCAACGTAATCTTGAAAG+TGG | - | chr5.3:2919037-2919056 | None:intergenic | 35.0% | |
GATCTGATTATTTGGAAGGT+AGG | + | chr5.3:2919053-2919072 | MS.gene22273:intron | 35.0% | |
GCAACAATGATACTGAAAAC+TGG | + | chr5.3:2920787-2920806 | MS.gene22273:intron | 35.0% | |
GCATTCAAAATGTATGCTTG+TGG | - | chr5.3:2918198-2918217 | None:intergenic | 35.0% | |
GCCAAGTTACACAATATATG+AGG | + | chr5.3:2916872-2916891 | MS.gene22273:CDS | 35.0% | |
GGTAGAAAAATAAGGGTAAG+TGG | + | chr5.3:2916413-2916432 | MS.gene22273:intron | 35.0% | |
GGTTTCTGCTGAAACTTATA+AGG | - | chr5.3:2916947-2916966 | None:intergenic | 35.0% | |
TAAAAACTCTGATCGTTGCA+AGG | - | chr5.3:2920497-2920516 | None:intergenic | 35.0% | |
TAAGCAGTTTATGCCTAACT+TGG | - | chr5.3:2920562-2920581 | None:intergenic | 35.0% | |
TACATGGAGGGTAATCAATT+TGG | + | chr5.3:2917140-2917159 | MS.gene22273:CDS | 35.0% | |
TACTGAAGACTTTCTTATCC+AGG | - | chr5.3:2917386-2917405 | None:intergenic | 35.0% | |
TAGGCATAAACTGCTTAAAG+TGG | + | chr5.3:2920565-2920584 | MS.gene22273:intron | 35.0% | |
TATGATTTAGCCAGTAACAG+TGG | + | chr5.3:2919769-2919788 | MS.gene22273:intron | 35.0% | |
TATTCCATTAGAGGAGTTGT+TGG | + | chr5.3:2917642-2917661 | MS.gene22273:intron | 35.0% | |
TCATGATACCTCAAGCAATA+AGG | - | chr5.3:2920686-2920705 | None:intergenic | 35.0% | |
TCGGCGATTCTATGAAAATT+TGG | + | chr5.3:2916848-2916867 | MS.gene22273:CDS | 35.0% | |
TGAAGAAACAGATGATACCT+TGG | + | chr5.3:2917879-2917898 | MS.gene22273:CDS | 35.0% | |
TGACAAAAATAAACAGCAGC+AGG | + | chr5.3:2917750-2917769 | MS.gene22273:CDS | 35.0% | |
TGATTGTTTATAGGCCTAGA+TGG | + | chr5.3:2916976-2916995 | MS.gene22273:CDS | 35.0% | |
TGCCAAACTTAATTAGCAAG+TGG | - | chr5.3:2919234-2919253 | None:intergenic | 35.0% | |
TGCTTGTGGAGAAAGAAATA+TGG | - | chr5.3:2918184-2918203 | None:intergenic | 35.0% | |
TTATCCGAATGTGGTAACAA+GGG | + | chr5.3:2919638-2919657 | MS.gene22273:intron | 35.0% | |
TTCTTATATCGTGGAAAGGA+AGG | - | chr5.3:2920279-2920298 | None:intergenic | 35.0% | |
TTTCGTAAATTCACAGAGGA+TGG | + | chr5.3:2916915-2916934 | MS.gene22273:CDS | 35.0% | |
TTTCTTCATTCCATATTCCC+TGG | - | chr5.3:2917867-2917886 | None:intergenic | 35.0% | |
! | AAAACTTGTTCCGAAGTCTT+TGG | - | chr5.3:2919010-2919029 | None:intergenic | 35.0% |
! | AAAAGAGACTGGTCAAAGTA+AGG | - | chr5.3:2920424-2920443 | None:intergenic | 35.0% |
! | AAAGACAATCATTTGCTGAC+AGG | + | chr5.3:2917714-2917733 | MS.gene22273:intron | 35.0% |
! | AAGACAATCATTTGCTGACA+GGG | + | chr5.3:2917715-2917734 | MS.gene22273:intron | 35.0% |
! | ATCAAAGTTGCATGGATTAC+TGG | - | chr5.3:2921785-2921804 | None:intergenic | 35.0% |
! | ATCTTAAACTTGAGAGTGTG+TGG | - | chr5.3:2921192-2921211 | None:intergenic | 35.0% |
! | ATTAGACATCCTTTAGAGAC+AGG | + | chr5.3:2920653-2920672 | MS.gene22273:intron | 35.0% |
! | CACCACTTGCTAATTAAGTT+TGG | + | chr5.3:2919229-2919248 | MS.gene22273:CDS | 35.0% |
! | CATCCTGTGTTTCATTTTCA+TGG | + | chr5.3:2919981-2920000 | MS.gene22273:intron | 35.0% |
! | CTCAAGTTTAAGATCAAACC+AGG | + | chr5.3:2921198-2921217 | MS.gene22273:CDS | 35.0% |
! | GCTCAACATGTTAACTTGAA+TGG | + | chr5.3:2919798-2919817 | MS.gene22273:intron | 35.0% |
! | GTCTCTAAAGGATGTCTAAT+TGG | - | chr5.3:2920653-2920672 | None:intergenic | 35.0% |
! | TTGGAAAATTTGCTTGCACA+TGG | + | chr5.3:2916704-2916723 | MS.gene22273:intron | 35.0% |
!! | AATTTGCTGTGGAGAACAAT+AGG | - | chr5.3:2918093-2918112 | None:intergenic | 35.0% |
!! | CATGTCATAAGCTGTTTTGT+AGG | + | chr5.3:2916311-2916330 | MS.gene22273:intron | 35.0% |
!! | GATCTCAAAACAATTTGCTG+TGG | - | chr5.3:2918104-2918123 | None:intergenic | 35.0% |
!! | GGTCTTGTTTGATGATAAAG+CGG | - | chr5.3:2919119-2919138 | None:intergenic | 35.0% |
!! | TCGAATCTTCTTGCTTTTGA+CGG | - | chr5.3:2917047-2917066 | None:intergenic | 35.0% |
!! | TCTCTAGTTTGCTTAACTTC+AGG | + | chr5.3:2920945-2920964 | MS.gene22273:intron | 35.0% |
!! | TCTTTTCCGGTTTGATGATA+AGG | + | chr5.3:2920438-2920457 | MS.gene22273:CDS | 35.0% |
!! | TGTTGTGGTTTTTAGATAGC+TGG | + | chr5.3:2920716-2920735 | MS.gene22273:intron | 35.0% |
!!! | AGTTTTTTGCTTGGTGGTAT+CGG | + | chr5.3:2916349-2916368 | MS.gene22273:intron | 35.0% |
!!! | TAAGCAAACACCCACTTTTT+AGG | + | chr5.3:2916503-2916522 | MS.gene22273:intron | 35.0% |
!!! | TATTCATGTTTTGAAGCCTC+AGG | + | chr5.3:2919864-2919883 | MS.gene22273:intron | 35.0% |
AAAGCAGCAATATTGCAGCT+CGG | + | chr5.3:2915970-2915989 | MS.gene22273:CDS | 40.0% | |
AAATCACGTGCAGCCTAATA+TGG | + | chr5.3:2917792-2917811 | MS.gene22273:CDS | 40.0% | |
AAATCATTTGGCGCCAAGTT+AGG | + | chr5.3:2920546-2920565 | MS.gene22273:intron | 40.0% | |
AATCACGTGCAGCCTAATAT+GGG | + | chr5.3:2917793-2917812 | MS.gene22273:CDS | 40.0% | |
ACATAGAGGAATGCTAGCAA+CGG | - | chr5.3:2921405-2921424 | None:intergenic | 40.0% | |
ACCACTTTCATGTAACGTCA+AGG | + | chr5.3:2920109-2920128 | MS.gene22273:CDS | 40.0% | |
ACCTCAAGCAATAAGGACAA+CGG | - | chr5.3:2920679-2920698 | None:intergenic | 40.0% | |
ACTATGTGGGGAGGAAAATA+AGG | - | chr5.3:2918476-2918495 | None:intergenic | 40.0% | |
AGAATGTAAAGACGGATCAG+GGG | - | chr5.3:2920041-2920060 | None:intergenic | 40.0% | |
AGCAGGTGCATCATGAATTT+GGG | - | chr5.3:2917186-2917205 | None:intergenic | 40.0% | |
AGGAATTGAACAGATGTTGC+TGG | - | chr5.3:2919185-2919204 | None:intergenic | 40.0% | |
AGTAATTAGGAGAAACGGCA+AGG | - | chr5.3:2918819-2918838 | None:intergenic | 40.0% | |
AGTTCATTGCAAGAAGCAAG+TGG | - | chr5.3:2917098-2917117 | None:intergenic | 40.0% | |
ATACAGCAACAAAAGCTGGA+TGG | - | chr5.3:2919909-2919928 | None:intergenic | 40.0% | |
ATTAAGTTTGGCAGCGTAGA+TGG | + | chr5.3:2919241-2919260 | MS.gene22273:CDS | 40.0% | |
CAAATTTAGGTCCTGAAGCT+GGG | + | chr5.3:2921847-2921866 | MS.gene22273:intron | 40.0% | |
CAAGAACAAAGTCTGCTGTA+TGG | - | chr5.3:2921940-2921959 | None:intergenic | 40.0% | |
CAATTCCAAAGAGTGATAGC+TGG | + | chr5.3:2921013-2921032 | MS.gene22273:intron | 40.0% | |
CAGAACACAGTTTCATGAAC+TGG | + | chr5.3:2919601-2919620 | MS.gene22273:intron | 40.0% | |
CAGAATGTAAAGACGGATCA+GGG | - | chr5.3:2920042-2920061 | None:intergenic | 40.0% | |
CTATGTGGGGAGGAAAATAA+GGG | - | chr5.3:2918475-2918494 | None:intergenic | 40.0% | |
CTCAATTCAAATGCTCAGGT+TGG | + | chr5.3:2917576-2917595 | MS.gene22273:intron | 40.0% | |
CTTATGGACAGGACATTGTT+TGG | + | chr5.3:2918148-2918167 | MS.gene22273:intron | 40.0% | |
CTTTGGATCCTCTGGTAAAT+CGG | - | chr5.3:2918993-2919012 | None:intergenic | 40.0% | |
GCAACATCTGTTCAATTCCT+TGG | + | chr5.3:2919185-2919204 | MS.gene22273:intron | 40.0% | |
GCAGTGACAGTATAAAACAG+GGG | - | chr5.3:2918129-2918148 | None:intergenic | 40.0% | |
GTAATTAGGAGAAACGGCAA+GGG | - | chr5.3:2918818-2918837 | None:intergenic | 40.0% | |
TAACACACACTCTCCTTGAT+TGG | + | chr5.3:2921286-2921305 | MS.gene22273:intron | 40.0% | |
TAATGATAGACTATGTGGGG+AGG | - | chr5.3:2918485-2918504 | None:intergenic | 40.0% | |
TAGTCCACTTTCTAATGTGG+AGG | + | chr5.3:2921452-2921471 | MS.gene22273:intron | 40.0% | |
TATATCGTGGAAAGGAAGGA+GGG | - | chr5.3:2920275-2920294 | None:intergenic | 40.0% | |
TATCATGCACACACTCTGTA+AGG | + | chr5.3:2921639-2921658 | MS.gene22273:intron | 40.0% | |
TCAAATTTAGGTCCTGAAGC+TGG | + | chr5.3:2921846-2921865 | MS.gene22273:intron | 40.0% | |
TCAACCCTTGTTACCACATT+CGG | - | chr5.3:2919645-2919664 | None:intergenic | 40.0% | |
TCAGCATTTCTTGATACCTG+AGG | - | chr5.3:2919883-2919902 | None:intergenic | 40.0% | |
TCCAACACACACTCTTTGAT+TGG | - | chr5.3:2921364-2921383 | None:intergenic | 40.0% | |
TCCTTGACGTTACATGAAAG+TGG | - | chr5.3:2920113-2920132 | None:intergenic | 40.0% | |
TGATTTAGCCAGTAACAGTG+GGG | + | chr5.3:2919771-2919790 | MS.gene22273:intron | 40.0% | |
TTATATCGTGGAAAGGAAGG+AGG | - | chr5.3:2920276-2920295 | None:intergenic | 40.0% | |
TTCATGCACTAGAACAGCTA+CGG | + | chr5.3:2920175-2920194 | MS.gene22273:CDS | 40.0% | |
TTTCTATTGAAGGAACACCC+TGG | - | chr5.3:2917223-2917242 | None:intergenic | 40.0% | |
TTTGGATCCTCTGGTAAATC+GGG | - | chr5.3:2918992-2919011 | None:intergenic | 40.0% | |
! | ACCAATCAAAGAGTGTGTGT+TGG | + | chr5.3:2921360-2921379 | MS.gene22273:intron | 40.0% |
! | ACTTTGACCAGTCTCTTTTC+CGG | + | chr5.3:2920425-2920444 | MS.gene22273:CDS | 40.0% |
! | GATTCAGGTTCCTTCAACAA+AGG | - | chr5.3:2916780-2916799 | None:intergenic | 40.0% |
! | GTAGGAGGCTCTTTTCTAAA+TGG | + | chr5.3:2919490-2919509 | MS.gene22273:intron | 40.0% |
! | GTTTTCGGTAAGTTAGGACA+GGG | - | chr5.3:2919520-2919539 | None:intergenic | 40.0% |
! | TCATGAAACTGTGTTCTGAG+AGG | - | chr5.3:2919599-2919618 | None:intergenic | 40.0% |
! | TGAGGTATCATGACAGACTT+TGG | + | chr5.3:2920693-2920712 | MS.gene22273:intron | 40.0% |
! | TGTGTTGCTAGCATTTCTCT+TGG | - | chr5.3:2921261-2921280 | None:intergenic | 40.0% |
! | TGTTTTCGGTAAGTTAGGAC+AGG | - | chr5.3:2919521-2919540 | None:intergenic | 40.0% |
! | TTAAACTTGAGAGTGTGTGG+AGG | - | chr5.3:2921189-2921208 | None:intergenic | 40.0% |
! | TTGAACCGAGTTTCTTTTGG+TGG | + | chr5.3:2920747-2920766 | MS.gene22273:intron | 40.0% |
! | TTGTTGACGTTCGTGCTATT+GGG | + | chr5.3:2917523-2917542 | MS.gene22273:CDS | 40.0% |
!! | AGATGAGAAAGCACCTCAAA+AGG | - | chr5.3:2917259-2917278 | None:intergenic | 40.0% |
!! | AGCTTATTTCTGCAGCTGAT+CGG | + | chr5.3:2921118-2921137 | MS.gene22273:intron | 40.0% |
!! | CTTCACAGGTGAAGTATTGT+TGG | + | chr5.3:2920223-2920242 | MS.gene22273:intron | 40.0% |
!! | TGATATGGTAATGGGAGTGA+AGG | + | chr5.3:2920820-2920839 | MS.gene22273:intron | 40.0% |
!!! | GTTTTTTCCCGATTTACCAG+AGG | + | chr5.3:2918982-2919001 | MS.gene22273:intron | 40.0% |
!!! | GTTTTTTGCTTGGTGGTATC+GGG | + | chr5.3:2916350-2916369 | MS.gene22273:intron | 40.0% |
AAAGCTCGTCTGCTGAATTC+TGG | - | chr5.3:2920065-2920084 | None:intergenic | 45.0% | |
AATGGAAGATGGAGAGATCC+TGG | + | chr5.3:2917365-2917384 | MS.gene22273:CDS | 45.0% | |
ACAGGGAAAAAATGTGCACC+TGG | - | chr5.3:2921219-2921238 | None:intergenic | 45.0% | |
ACCAGAGGATCCAAAGACTT+CGG | + | chr5.3:2918997-2919016 | MS.gene22273:intron | 45.0% | |
ACGTACAAGAACCTGAGAGA+GGG | + | chr5.3:2919368-2919387 | MS.gene22273:intron | 45.0% | |
AGAACAGCTACGGAGCATAA+AGG | + | chr5.3:2920185-2920204 | MS.gene22273:CDS | 45.0% | |
ATCACGTGCAGCCTAATATG+GGG | + | chr5.3:2917794-2917813 | MS.gene22273:CDS | 45.0% | |
ATGAATTTGGGCCGTAGAAG+TGG | - | chr5.3:2917174-2917193 | None:intergenic | 45.0% | |
ATTCATGATGCACCTGCTGT+TGG | + | chr5.3:2917188-2917207 | MS.gene22273:CDS | 45.0% | |
CAAATTTGTACTCCTGCTCC+TGG | + | chr5.3:2916005-2916024 | MS.gene22273:CDS | 45.0% | |
CAATAGCACGAACGTCAACA+AGG | - | chr5.3:2917524-2917543 | None:intergenic | 45.0% | |
CACATGGGATCCACATGATT+TGG | + | chr5.3:2921317-2921336 | MS.gene22273:intron | 45.0% | |
CACCTCCACCAAAAGAAACT+CGG | - | chr5.3:2920755-2920774 | None:intergenic | 45.0% | |
CAGCAGGTGCATCATGAATT+TGG | - | chr5.3:2917187-2917206 | None:intergenic | 45.0% | |
CAGGTTACTCGTGCAGAAAA+GGG | + | chr5.3:2920964-2920983 | MS.gene22273:intron | 45.0% | |
CATAGAGGAATGCTAGCAAC+GGG | - | chr5.3:2921404-2921423 | None:intergenic | 45.0% | |
CATCAAACCGGAAAAGAGAC+TGG | - | chr5.3:2920435-2920454 | None:intergenic | 45.0% | |
CATCTGTTCAATTCCTTGGC+AGG | + | chr5.3:2919189-2919208 | MS.gene22273:intron | 45.0% | |
CTCTGTGACTGACAGCTAAA+AGG | - | chr5.3:2920394-2920413 | None:intergenic | 45.0% | |
CTCTTCCAGCTATCACTCTT+TGG | - | chr5.3:2921021-2921040 | None:intergenic | 45.0% | |
CTGACAGCTAAAAGGCAAAG+AGG | - | chr5.3:2920386-2920405 | None:intergenic | 45.0% | |
CTTGTTGACGTTCGTGCTAT+TGG | + | chr5.3:2917522-2917541 | MS.gene22273:CDS | 45.0% | |
GAAGTGATTACACTAGTGCC+AGG | - | chr5.3:2916026-2916045 | None:intergenic | 45.0% | |
GAATGTAAAGACGGATCAGG+GGG | - | chr5.3:2920040-2920059 | None:intergenic | 45.0% | |
GACTTTGTTCTTGCAGCCTT+CGG | + | chr5.3:2921947-2921966 | MS.gene22273:CDS | 45.0% | |
GAGAGAGCAAAGGGCAAAAT+TGG | - | chr5.3:2921918-2921937 | None:intergenic | 45.0% | |
GAGGCTAGATGTCTACTACA+AGG | - | chr5.3:2919467-2919486 | None:intergenic | 45.0% | |
GCAGAATGTAAAGACGGATC+AGG | - | chr5.3:2920043-2920062 | None:intergenic | 45.0% | |
GCTACGGAGCATAAAGGATA+AGG | + | chr5.3:2920191-2920210 | MS.gene22273:CDS | 45.0% | |
GCTTCCTCCACATTAGAAAG+TGG | - | chr5.3:2921459-2921478 | None:intergenic | 45.0% | |
GGCTCACACAAATCTGTTGT+TGG | - | chr5.3:2921597-2921616 | None:intergenic | 45.0% | |
GGCTTACAACTGTTAAGTGG+AGG | + | chr5.3:2919719-2919738 | MS.gene22273:intron | 45.0% | |
GTGTGCAACAGTTGCAAATC+TGG | - | chr5.3:2918234-2918253 | None:intergenic | 45.0% | |
TACGTACAAGAACCTGAGAG+AGG | + | chr5.3:2919367-2919386 | MS.gene22273:intron | 45.0% | |
TACTCGTGCAGAAAAGGGAT+AGG | + | chr5.3:2920969-2920988 | MS.gene22273:intron | 45.0% | |
TACTGTCACTGCTTATGGAC+AGG | + | chr5.3:2918137-2918156 | MS.gene22273:intron | 45.0% | |
TAGACATCTAGCCTCTCTGT+AGG | + | chr5.3:2919472-2919491 | MS.gene22273:intron | 45.0% | |
TCAGGTTACTCGTGCAGAAA+AGG | + | chr5.3:2920963-2920982 | MS.gene22273:intron | 45.0% | |
TGCTGTATGGAGAGAGCAAA+GGG | - | chr5.3:2921927-2921946 | None:intergenic | 45.0% | |
! | AACCGAGTTTCTTTTGGTGG+AGG | + | chr5.3:2920750-2920769 | MS.gene22273:intron | 45.0% |
! | AGGTTCAGGAGGTTGATTAC+TGG | + | chr5.3:2920840-2920859 | MS.gene22273:intron | 45.0% |
! | ATGGGATCCACATGATTTGG+TGG | + | chr5.3:2921320-2921339 | MS.gene22273:intron | 45.0% |
! | GACTGGTCAAAGTAAGGAGA+AGG | - | chr5.3:2920418-2920437 | None:intergenic | 45.0% |
! | GGGTTGAACTTTTGACGACT+AGG | + | chr5.3:2919658-2919677 | MS.gene22273:intron | 45.0% |
! | TGGACTGTTTGCCACTTCTA+CGG | + | chr5.3:2917160-2917179 | MS.gene22273:CDS | 45.0% |
! | TGGTATCGGGTGTGATTGTA+GGG | + | chr5.3:2916363-2916382 | MS.gene22273:intron | 45.0% |
! | TGTTGACGTTCGTGCTATTG+GGG | + | chr5.3:2917524-2917543 | MS.gene22273:CDS | 45.0% |
!! | CATGACAGACTTTGGTGTTG+TGG | + | chr5.3:2920701-2920720 | MS.gene22273:intron | 45.0% |
!! | TGGGATCCACATGATTTGGT+GGG | + | chr5.3:2921321-2921340 | MS.gene22273:intron | 45.0% |
!! | TTCCTTCTAGAATAGCGTGC+CGG | + | chr5.3:2921669-2921688 | MS.gene22273:intron | 45.0% |
!! | TTATAAAAATAAAAATCATT+TGG | + | chr5.3:2920534-2920553 | MS.gene22273:intron | 5.0% |
AAGTTTGGCAGCGTAGATGG+AGG | + | chr5.3:2919244-2919263 | MS.gene22273:CDS | 50.0% | |
AATGGGAGTGAAGGTTCAGG+AGG | + | chr5.3:2920829-2920848 | MS.gene22273:intron | 50.0% | |
ACATCTAGCCTCTCTGTAGG+AGG | + | chr5.3:2919475-2919494 | MS.gene22273:intron | 50.0% | |
AGGCCCAACAACTCCTCTAA+TGG | - | chr5.3:2917649-2917668 | None:intergenic | 50.0% | |
AGTTTGGCAGCGTAGATGGA+GGG | + | chr5.3:2919245-2919264 | MS.gene22273:CDS | 50.0% | |
ATGGGTCCCACCAAATCATG+TGG | - | chr5.3:2921330-2921349 | None:intergenic | 50.0% | |
ATTACACTAGTGCCAGGAGC+AGG | - | chr5.3:2916020-2916039 | None:intergenic | 50.0% | |
CTGCTGTATGGAGAGAGCAA+AGG | - | chr5.3:2921928-2921947 | None:intergenic | 50.0% | |
GAAAAGAGCCTCCTACAGAG+AGG | - | chr5.3:2919486-2919505 | None:intergenic | 50.0% | |
GCCGTTGTCCTTATTGCTTG+AGG | + | chr5.3:2920675-2920694 | MS.gene22273:intron | 50.0% | |
GCTTGCAGGTTCATCATGCT+CGG | + | chr5.3:2916829-2916848 | MS.gene22273:intron | 50.0% | |
TCCAAGAATTGCACCTGCCA+AGG | - | chr5.3:2919205-2919224 | None:intergenic | 50.0% | |
TCCGAAGTCTTTGGATCCTC+TGG | - | chr5.3:2919001-2919020 | None:intergenic | 50.0% | |
TCCTTGGCAGGTGCAATTCT+TGG | + | chr5.3:2919201-2919220 | MS.gene22273:intron | 50.0% | |
TGTTAGTGGGATTGGGGATG+AGG | + | chr5.3:2920624-2920643 | MS.gene22273:intron | 50.0% | |
! | CGAGTTTCTTTTGGTGGAGG+TGG | + | chr5.3:2920753-2920772 | MS.gene22273:intron | 50.0% |
! | GGAGGGAGCATGCAATTACA+AGG | - | chr5.3:2920258-2920277 | None:intergenic | 50.0% |
! | GTGGTATCGGGTGTGATTGT+AGG | + | chr5.3:2916362-2916381 | MS.gene22273:intron | 50.0% |
! | GTTTCTTTTGGTGGAGGTGG+TGG | + | chr5.3:2920756-2920775 | MS.gene22273:intron | 50.0% |
!! | GGTAATGGGAGTGAAGGTTC+AGG | + | chr5.3:2920826-2920845 | MS.gene22273:intron | 50.0% |
!!! | TGCTCAGGTTGGCTAGCTTT+TGG | + | chr5.3:2917587-2917606 | MS.gene22273:intron | 50.0% |
AGAACCTGAGAGAGGGTCCA+AGG | + | chr5.3:2919375-2919394 | MS.gene22273:intron | 55.0% | |
AGGTCCTGAAGCTGGGAGTA+TGG | + | chr5.3:2921854-2921873 | MS.gene22273:intron | 55.0% | |
CATGATGCACCTGCTGTTGG+AGG | + | chr5.3:2917191-2917210 | MS.gene22273:CDS | 55.0% | |
CCATCCATACTCCCAGCTTC+AGG | - | chr5.3:2921861-2921880 | None:intergenic | 55.0% | |
GAGCTCTTCCCCACTGTTAC+TGG | - | chr5.3:2919782-2919801 | None:intergenic | 55.0% | |
GGACAACGGCCTGTCTCTAA+AGG | - | chr5.3:2920665-2920684 | None:intergenic | 55.0% | |
GTCCGGCACGCTATTCTAGA+AGG | - | chr5.3:2921674-2921693 | None:intergenic | 55.0% | |
GTTTGGCAGCGTAGATGGAG+GGG | + | chr5.3:2919246-2919265 | MS.gene22273:CDS | 55.0% | |
! | CCTGAAGCTGGGAGTATGGA+TGG | + | chr5.3:2921858-2921877 | MS.gene22273:CDS | 55.0% |
CCTAAGTGTGTGCGCGTGTC+CGG | - | chr5.3:2921691-2921710 | None:intergenic | 60.0% | |
GCTGTTGGAGGAGCTGTCCA+GGG | + | chr5.3:2917203-2917222 | MS.gene22273:CDS | 60.0% | |
TGCTGTTGGAGGAGCTGTCC+AGG | + | chr5.3:2917202-2917221 | MS.gene22273:CDS | 60.0% | |
TGGACAGCTCCTCCAACAGC+AGG | - | chr5.3:2917203-2917222 | None:intergenic | 60.0% | |
!! | TTGGCCTTGGACCCTCTCTC+AGG | - | chr5.3:2919382-2919401 | None:intergenic | 60.0% |
CCGGACACGCGCACACACTT+AGG | + | chr5.3:2921688-2921707 | MS.gene22273:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 2915920 | 2921995 | 2915920 | ID=MS.gene22273 |
chr5.3 | mRNA | 2915920 | 2921995 | 2915920 | ID=MS.gene22273.t1;Parent=MS.gene22273 |
chr5.3 | exon | 2915920 | 2916034 | 2915920 | ID=MS.gene22273.t1.exon1;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2915920 | 2916034 | 2915920 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2916837 | 2917264 | 2916837 | ID=MS.gene22273.t1.exon2;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2916837 | 2917264 | 2916837 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2917365 | 2917593 | 2917365 | ID=MS.gene22273.t1.exon3;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2917365 | 2917593 | 2917365 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2917736 | 2917900 | 2917736 | ID=MS.gene22273.t1.exon4;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2917736 | 2917900 | 2917736 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2919002 | 2919070 | 2919002 | ID=MS.gene22273.t1.exon5;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2919002 | 2919070 | 2919002 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2919211 | 2919267 | 2919211 | ID=MS.gene22273.t1.exon6;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2919211 | 2919267 | 2919211 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2919886 | 2919966 | 2919886 | ID=MS.gene22273.t1.exon7;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2919886 | 2919966 | 2919886 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2920066 | 2920230 | 2920066 | ID=MS.gene22273.t1.exon8;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2920066 | 2920230 | 2920066 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2920364 | 2920459 | 2920364 | ID=MS.gene22273.t1.exon9;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2920364 | 2920459 | 2920364 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2921120 | 2921219 | 2921120 | ID=MS.gene22273.t1.exon10;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2921120 | 2921219 | 2921120 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
chr5.3 | exon | 2921856 | 2921995 | 2921856 | ID=MS.gene22273.t1.exon11;Parent=MS.gene22273.t1 |
chr5.3 | CDS | 2921856 | 2921995 | 2921856 | ID=cds.MS.gene22273.t1;Parent=MS.gene22273.t1 |
Gene Sequence |
Protein sequence |