Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057639.t1 | XP_003606964.1 | 96 | 225 | 9 | 0 | 1 | 225 | 1 | 225 | 8.80E-110 | 406.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057639.t1 | G7JHF1 | 96.0 | 225 | 9 | 0 | 1 | 225 | 1 | 225 | 6.3e-110 | 406.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050642 | MS.gene057639 | 0.804113 | 2.52E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene057639 | 0.825492 | 4.55E-54 | -1.69E-46 |
| MS.gene050820 | MS.gene057639 | 0.817371 | 3.41E-52 | -1.69E-46 |
| MS.gene050953 | MS.gene057639 | 0.829521 | 4.91E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene057639 | 0.813682 | 2.26E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene057639 | 0.803452 | 3.46E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene057639 | 0.819063 | 1.41E-52 | -1.69E-46 |
| MS.gene054405 | MS.gene057639 | 0.825641 | 4.20E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene057639 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene057639 | 0.807736 | 4.37E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene057639 | 0.816408 | 5.62E-52 | -1.69E-46 |
| MS.gene055356 | MS.gene057639 | 0.82608 | 3.30E-54 | -1.69E-46 |
| MS.gene055358 | MS.gene057639 | 0.815325 | 9.80E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene057639 | 0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene057639 | MS.gene059128 | 0.808174 | 3.53E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene061114 | -0.845777 | 3.29E-59 | -1.69E-46 |
| MS.gene057639 | MS.gene061333 | 0.813244 | 2.82E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene061334 | 0.812687 | 3.74E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene061343 | 0.807748 | 4.34E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene062430 | 0.807008 | 6.23E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene065133 | 0.823586 | 1.28E-53 | -1.69E-46 |
| MS.gene057639 | MS.gene066206 | 0.829956 | 3.85E-55 | -1.69E-46 |
| MS.gene057639 | MS.gene069559 | 0.809329 | 2.00E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene070695 | 0.817988 | 2.48E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene07115 | 0.800288 | 1.55E-48 | -1.69E-46 |
| MS.gene057639 | MS.gene071529 | 0.829135 | 6.10E-55 | -1.69E-46 |
| MS.gene057639 | MS.gene071693 | -0.804484 | 2.11E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene071821 | 0.815346 | 9.69E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene071884 | 0.824338 | 8.52E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene072618 | 0.80826 | 3.38E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene072677 | 0.810733 | 9.95E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene073723 | 0.802985 | 4.33E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene074393 | -0.81165 | 6.30E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene08324 | -0.810164 | 1.32E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene08782 | 0.805589 | 1.24E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene09069 | 0.809335 | 1.99E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene09136 | 0.81273 | 3.66E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene09768 | -0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene21907 | 0.807706 | 4.43E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene22251 | 0.809536 | 1.80E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene22273 | 0.814766 | 1.30E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene22505 | 0.84107 | 5.94E-58 | -1.69E-46 |
| MS.gene057639 | MS.gene22691 | 0.833953 | 3.97E-56 | -1.69E-46 |
| MS.gene057639 | MS.gene23009 | 0.826266 | 2.98E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene23304 | 0.802821 | 4.68E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene23305 | 0.838934 | 2.14E-57 | -1.69E-46 |
| MS.gene057639 | MS.gene23306 | 0.942591 | 5.48E-102 | -1.69E-46 |
| MS.gene057639 | MS.gene23912 | 0.82671 | 2.34E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene23915 | 0.815307 | 9.89E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene24247 | 0.823776 | 1.15E-53 | -1.69E-46 |
| MS.gene057639 | MS.gene25866 | 0.829283 | 5.61E-55 | -1.69E-46 |
| MS.gene057639 | MS.gene25868 | 0.80475 | 1.86E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene25913 | -0.817349 | 3.45E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene27271 | 0.803336 | 3.66E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene30928 | 0.816255 | 6.08E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene31182 | 0.807009 | 6.23E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene31183 | 0.811092 | 8.32E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene31582 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene31665 | 0.804589 | 2.01E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene31768 | 0.805088 | 1.58E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene33127 | -0.821443 | 4.03E-53 | -1.69E-46 |
| MS.gene057639 | MS.gene33198 | 0.800368 | 1.49E-48 | -1.69E-46 |
| MS.gene057639 | MS.gene34220 | 0.80824 | 3.41E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene34936 | -0.829201 | 5.88E-55 | -1.69E-46 |
| MS.gene057639 | MS.gene35408 | 0.833922 | 4.04E-56 | -1.69E-46 |
| MS.gene057639 | MS.gene35909 | 0.812568 | 3.97E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene35910 | 0.818827 | 1.60E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene36061 | 0.837106 | 6.32E-57 | -1.69E-46 |
| MS.gene057639 | MS.gene36862 | 0.811344 | 7.34E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene36863 | 0.816053 | 6.74E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene37213 | 0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene40031 | 0.813364 | 2.66E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene41037 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene41327 | 0.811096 | 8.30E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene41851 | -0.802473 | 5.52E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene42668 | 0.81987 | 9.26E-53 | -1.69E-46 |
| MS.gene057639 | MS.gene43459 | 0.807578 | 4.72E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene44055 | 0.834828 | 2.39E-56 | -1.69E-46 |
| MS.gene057639 | MS.gene44461 | 0.813766 | 2.17E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene44474 | -0.830694 | 2.54E-55 | -1.69E-46 |
| MS.gene057639 | MS.gene46989 | 0.826719 | 2.32E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene48704 | 0.800505 | 1.40E-48 | -1.69E-46 |
| MS.gene057639 | MS.gene48899 | 0.821549 | 3.81E-53 | -1.69E-46 |
| MS.gene057639 | MS.gene49193 | 0.820188 | 7.83E-53 | -1.69E-46 |
| MS.gene057639 | MS.gene51548 | -0.802385 | 5.75E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene52059 | 0.831085 | 2.04E-55 | -1.69E-46 |
| MS.gene057639 | MS.gene52621 | 0.833091 | 6.51E-56 | -1.69E-46 |
| MS.gene057639 | MS.gene53200 | 0.802207 | 6.26E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene54387 | 0.810669 | 1.03E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene56100 | 0.807018 | 6.20E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene56484 | 0.818702 | 1.71E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene57565 | 0.802377 | 5.77E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene57566 | 0.803431 | 3.50E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene57643 | 0.82436 | 8.42E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene57951 | 0.807137 | 5.85E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene59035 | 0.803661 | 3.13E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene60204 | 0.812448 | 4.22E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene60206 | 0.829561 | 4.81E-55 | -1.69E-46 |
| MS.gene057639 | MS.gene61139 | 0.825378 | 4.84E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene61547 | -0.846777 | 1.76E-59 | -1.69E-46 |
| MS.gene057639 | MS.gene62587 | 0.826828 | 2.19E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene63058 | 0.836336 | 9.93E-57 | -1.69E-46 |
| MS.gene057639 | MS.gene63288 | 0.807465 | 4.99E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene63412 | 0.81481 | 1.27E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene63507 | 0.82442 | 8.15E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene64621 | 0.81949 | 1.13E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene66964 | 0.807242 | 5.56E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene66969 | 0.839448 | 1.57E-57 | -1.69E-46 |
| MS.gene057639 | MS.gene67316 | 0.835952 | 1.24E-56 | -1.69E-46 |
| MS.gene057639 | MS.gene69794 | 0.803241 | 3.83E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene69935 | 0.809832 | 1.56E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene70021 | 0.815435 | 9.26E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene70022 | 0.817374 | 3.41E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene70585 | -0.800971 | 1.12E-48 | -1.69E-46 |
| MS.gene057639 | MS.gene70586 | -0.814162 | 1.77E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene71833 | 0.829735 | 4.36E-55 | -1.69E-46 |
| MS.gene057639 | MS.gene72054 | 0.807208 | 5.65E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene72900 | -0.801457 | 8.92E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene74922 | 0.801989 | 6.94E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene76554 | 0.809177 | 2.15E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene76643 | 0.815142 | 1.08E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene76773 | -0.813035 | 3.14E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene78129 | 0.809171 | 2.16E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene78896 | 0.800132 | 1.66E-48 | -1.69E-46 |
| MS.gene057639 | MS.gene80157 | 0.813594 | 2.37E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene81387 | 0.800365 | 1.49E-48 | -1.69E-46 |
| MS.gene057639 | MS.gene83831 | 0.849036 | 4.18E-60 | -1.69E-46 |
| MS.gene057639 | MS.gene84326 | 0.807084 | 6.01E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene84390 | 0.827003 | 1.99E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene84404 | 0.812832 | 3.48E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene86055 | 0.814458 | 1.53E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene88091 | 0.815063 | 1.12E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene88112 | 0.800207 | 1.61E-48 | -1.69E-46 |
| MS.gene057639 | MS.gene89438 | 0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene91159 | 0.814984 | 1.17E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene91548 | 0.824554 | 7.58E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene91807 | 0.801821 | 7.51E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene91809 | 0.82448 | 7.89E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene92051 | 0.817843 | 2.67E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene92548 | 0.809954 | 1.47E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene93500 | 0.807798 | 4.24E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene93888 | 0.816458 | 5.47E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene95277 | 0.808309 | 3.30E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene95377 | 0.83812 | 3.47E-57 | -1.69E-46 |
| MS.gene057639 | MS.gene95457 | 0.809677 | 1.68E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene97268 | 0.825717 | 4.03E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene97456 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene057639 | MS.gene97706 | 0.811826 | 5.76E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057639.t1 | MTR_4g070660 | 96.000 | 225 | 9 | 0 | 1 | 225 | 1 | 225 | 7.10e-147 | 408 |
| MS.gene057639.t1 | MTR_4g070640 | 73.009 | 226 | 47 | 5 | 1 | 225 | 1 | 213 | 2.34e-94 | 275 |
| MS.gene057639.t1 | MTR_4g070630 | 65.000 | 180 | 52 | 3 | 46 | 225 | 1 | 169 | 3.80e-72 | 217 |
| MS.gene057639.t1 | MTR_3g117050 | 37.984 | 258 | 101 | 12 | 9 | 221 | 10 | 253 | 1.86e-32 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057639.t1 | AT5G66440 | 30.705 | 241 | 141 | 8 | 1 | 220 | 1 | 236 | 1.23e-23 | 95.5 |
| MS.gene057639.t1 | AT4G34560 | 30.851 | 188 | 86 | 9 | 52 | 221 | 50 | 211 | 8.90e-11 | 60.1 |
Find 38 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCATGTTCCTGTTCTTT+TGG | 0.223580 | 4.2:-36472144 | None:intergenic |
| CGTTGAAGTGTGTGTTGTTT+TGG | 0.285321 | 4.2:+36471960 | MS.gene057639:CDS |
| CAAACAACGTGATGATTATA+AGG | 0.288441 | 4.2:-36472098 | None:intergenic |
| AAACTCGAGCGAGTATTTAA+AGG | 0.299130 | 4.2:+36472026 | MS.gene057639:CDS |
| CTCGAGTTTCTTACCACAAT+TGG | 0.332741 | 4.2:-36472012 | None:intergenic |
| GAGAAAATGAAAACTAAAAC+AGG | 0.335030 | 4.2:+36472285 | MS.gene057639:CDS |
| TGCTGCTGGTGAGGAGAAAA+TGG | 0.340169 | 4.2:+36472425 | MS.gene057639:CDS |
| AGAAGGGTTATTGTTATAGA+AGG | 0.356480 | 4.2:+36472313 | MS.gene057639:CDS |
| TTGCGTTGGCTTTCTCTGCT+TGG | 0.357630 | 4.2:-36471891 | None:intergenic |
| TCATAGAAAGCCTTGAAATC+AGG | 0.416707 | 4.2:-36471984 | None:intergenic |
| TTCTATGAGGTTACCAATTG+TGG | 0.435111 | 4.2:+36471999 | MS.gene057639:CDS |
| CGTTGGCTTTCTCTGCTTGG+AGG | 0.453384 | 4.2:-36471888 | None:intergenic |
| TGATGATATTTATGAAAAGT+TGG | 0.457167 | 4.2:+36472161 | MS.gene057639:CDS |
| GATATTTATGAAAAGTTGGC+AGG | 0.457338 | 4.2:+36472165 | MS.gene057639:CDS |
| TAAAACATCATAAGCTTCAA+AGG | 0.465357 | 4.2:+36471917 | MS.gene057639:CDS |
| AAAGGGCAACAACTTTGTTA+CGG | 0.468035 | 4.2:+36471935 | MS.gene057639:CDS |
| AGCTGCTCCTGCTGCTGGTG+AGG | 0.474801 | 4.2:+36472416 | MS.gene057639:CDS |
| ATTGAAGCTGCTCCTGCTGC+TGG | 0.500424 | 4.2:+36472411 | MS.gene057639:CDS |
| AACTAAAACAGGGTTGAAGA+AGG | 0.504135 | 4.2:+36472296 | MS.gene057639:CDS |
| AAGCAACAAAGAGGATTTGA+GGG | 0.514889 | 4.2:+36472519 | MS.gene057639:CDS |
| AAAACATCATAAGCTTCAAA+GGG | 0.531611 | 4.2:+36471918 | MS.gene057639:CDS |
| AATGGTGAGAATTTCGTATC+CGG | 0.535348 | 4.2:+36472443 | MS.gene057639:CDS |
| AAAGCAACAAAGAGGATTTG+AGG | 0.536464 | 4.2:+36472518 | MS.gene057639:CDS |
| ATCATCACGTTGTTTGCTCA+AGG | 0.539246 | 4.2:+36472105 | MS.gene057639:CDS |
| AAATATGATAGCACAAAAGA+AGG | 0.540013 | 4.2:+36472225 | MS.gene057639:CDS |
| TCGTTGCTCATCTCATCCTC+CGG | 0.543243 | 4.2:-36472462 | None:intergenic |
| TTTATTGCAAAGCAACAAAG+AGG | 0.547495 | 4.2:+36472510 | MS.gene057639:CDS |
| TGATTTCAAGGCTTTCTATG+AGG | 0.550039 | 4.2:+36471986 | MS.gene057639:CDS |
| ACTAAAACAGGGTTGAAGAA+GGG | 0.598384 | 4.2:+36472297 | MS.gene057639:CDS |
| GGAGTTTCGTCGTACTGTAG+AGG | 0.600879 | 4.2:+36472485 | MS.gene057639:CDS |
| GTGAGAGTGAGAACAGCGGA+AGG | 0.613601 | 4.2:+36472382 | MS.gene057639:CDS |
| GAACAAGAGAATTGATGATG+CGG | 0.644326 | 4.2:+36472260 | MS.gene057639:CDS |
| GGTGAGAATTTCGTATCCGG+AGG | 0.672479 | 4.2:+36472446 | MS.gene057639:CDS |
| AGATGTGAGAGTGAGAACAG+CGG | 0.688021 | 4.2:+36472378 | MS.gene057639:CDS |
| AGAAAATGAAAACTAAAACA+GGG | 0.723999 | 4.2:+36472286 | MS.gene057639:CDS |
| AGCAACAAAGAGGATTTGAG+GGG | 0.729509 | 4.2:+36472520 | MS.gene057639:CDS |
| CGATAACGAAGACAAAACAG+TGG | 0.748693 | 4.2:-36472071 | None:intergenic |
| GGAGGATGAGATGAGCAACG+AGG | 0.778929 | 4.2:+36472464 | MS.gene057639:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAATGAAAACTAAAACA+GGG | + | chr4.2:36472286-36472305 | MS.gene057639:CDS | 20.0% |
| !! | TGATGATATTTATGAAAAGT+TGG | + | chr4.2:36472161-36472180 | MS.gene057639:CDS | 20.0% |
| ! | AAAAAACATTCCAAAAGAAC+AGG | + | chr4.2:36472134-36472153 | MS.gene057639:CDS | 25.0% |
| ! | AAAACATCATAAGCTTCAAA+GGG | + | chr4.2:36471918-36471937 | MS.gene057639:CDS | 25.0% |
| ! | AAATATGATAGCACAAAAGA+AGG | + | chr4.2:36472225-36472244 | MS.gene057639:CDS | 25.0% |
| ! | GAGAAAATGAAAACTAAAAC+AGG | + | chr4.2:36472285-36472304 | MS.gene057639:CDS | 25.0% |
| ! | TAAAACATCATAAGCTTCAA+AGG | + | chr4.2:36471917-36471936 | MS.gene057639:CDS | 25.0% |
| !!! | AAACTGAGATTTTGAAGAAA+CGG | + | chr4.2:36472340-36472359 | MS.gene057639:CDS | 25.0% |
| !!! | TTTGAAGCTTATGATGTTTT+AGG | - | chr4.2:36471918-36471937 | None:intergenic | 25.0% |
| AGAAGGGTTATTGTTATAGA+AGG | + | chr4.2:36472313-36472332 | MS.gene057639:CDS | 30.0% | |
| CAAACAACGTGATGATTATA+AGG | - | chr4.2:36472101-36472120 | None:intergenic | 30.0% | |
| GATATTTATGAAAAGTTGGC+AGG | + | chr4.2:36472165-36472184 | MS.gene057639:CDS | 30.0% | |
| TTTATTGCAAAGCAACAAAG+AGG | + | chr4.2:36472510-36472529 | MS.gene057639:CDS | 30.0% | |
| AAACTCGAGCGAGTATTTAA+AGG | + | chr4.2:36472026-36472045 | MS.gene057639:CDS | 35.0% | |
| AAAGCAACAAAGAGGATTTG+AGG | + | chr4.2:36472518-36472537 | MS.gene057639:CDS | 35.0% | |
| AAAGGGCAACAACTTTGTTA+CGG | + | chr4.2:36471935-36471954 | MS.gene057639:CDS | 35.0% | |
| AACTAAAACAGGGTTGAAGA+AGG | + | chr4.2:36472296-36472315 | MS.gene057639:CDS | 35.0% | |
| AAGCAACAAAGAGGATTTGA+GGG | + | chr4.2:36472519-36472538 | MS.gene057639:CDS | 35.0% | |
| AATGGTGAGAATTTCGTATC+CGG | + | chr4.2:36472443-36472462 | MS.gene057639:CDS | 35.0% | |
| ACTAAAACAGGGTTGAAGAA+GGG | + | chr4.2:36472297-36472316 | MS.gene057639:CDS | 35.0% | |
| TCATAGAAAGCCTTGAAATC+AGG | - | chr4.2:36471987-36472006 | None:intergenic | 35.0% | |
| TGATTTCAAGGCTTTCTATG+AGG | + | chr4.2:36471986-36472005 | MS.gene057639:CDS | 35.0% | |
| TTCTATGAGGTTACCAATTG+TGG | + | chr4.2:36471999-36472018 | MS.gene057639:CDS | 35.0% | |
| ! | CACTGTTTTGTCTTCGTTAT+CGG | + | chr4.2:36472072-36472091 | MS.gene057639:CDS | 35.0% |
| ! | TCATCATGTTCCTGTTCTTT+TGG | - | chr4.2:36472147-36472166 | None:intergenic | 35.0% |
| !! | GAACAAGAGAATTGATGATG+CGG | + | chr4.2:36472260-36472279 | MS.gene057639:CDS | 35.0% |
| !!! | ATGATGTTTTAGGATTGCGT+TGG | - | chr4.2:36471908-36471927 | None:intergenic | 35.0% |
| !!! | TTGTTTTGGTCCTGATTTCA+AGG | + | chr4.2:36471974-36471993 | MS.gene057639:CDS | 35.0% |
| AGCAACAAAGAGGATTTGAG+GGG | + | chr4.2:36472520-36472539 | MS.gene057639:CDS | 40.0% | |
| ATCATCACGTTGTTTGCTCA+AGG | + | chr4.2:36472105-36472124 | MS.gene057639:CDS | 40.0% | |
| CGATAACGAAGACAAAACAG+TGG | - | chr4.2:36472074-36472093 | None:intergenic | 40.0% | |
| CTCGAGTTTCTTACCACAAT+TGG | - | chr4.2:36472015-36472034 | None:intergenic | 40.0% | |
| !!! | CGTTGAAGTGTGTGTTGTTT+TGG | + | chr4.2:36471960-36471979 | MS.gene057639:CDS | 40.0% |
| AGATGTGAGAGTGAGAACAG+CGG | + | chr4.2:36472378-36472397 | MS.gene057639:CDS | 45.0% | |
| GGAGTTTCGTCGTACTGTAG+AGG | + | chr4.2:36472485-36472504 | MS.gene057639:CDS | 50.0% | |
| GGTGAGAATTTCGTATCCGG+AGG | + | chr4.2:36472446-36472465 | MS.gene057639:CDS | 50.0% | |
| TCGTTGCTCATCTCATCCTC+CGG | - | chr4.2:36472465-36472484 | None:intergenic | 50.0% | |
| TGCTGCTGGTGAGGAGAAAA+TGG | + | chr4.2:36472425-36472444 | MS.gene057639:CDS | 50.0% | |
| ! | ATTTTCTCCTCACCAGCAGC+AGG | - | chr4.2:36472426-36472445 | None:intergenic | 50.0% |
| !! | TTGCGTTGGCTTTCTCTGCT+TGG | - | chr4.2:36471894-36471913 | None:intergenic | 50.0% |
| ATTGAAGCTGCTCCTGCTGC+TGG | + | chr4.2:36472411-36472430 | MS.gene057639:CDS | 55.0% | |
| GGAGGATGAGATGAGCAACG+AGG | + | chr4.2:36472464-36472483 | MS.gene057639:CDS | 55.0% | |
| GTGAGAGTGAGAACAGCGGA+AGG | + | chr4.2:36472382-36472401 | MS.gene057639:CDS | 55.0% | |
| !! | CGTTGGCTTTCTCTGCTTGG+AGG | - | chr4.2:36471891-36471910 | None:intergenic | 55.0% |
| AGCTGCTCCTGCTGCTGGTG+AGG | + | chr4.2:36472416-36472435 | MS.gene057639:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 36471868 | 36472545 | 36471868 | ID=MS.gene057639 |
| chr4.2 | mRNA | 36471868 | 36472545 | 36471868 | ID=MS.gene057639.t1;Parent=MS.gene057639 |
| chr4.2 | exon | 36471868 | 36472545 | 36471868 | ID=MS.gene057639.t1.exon1;Parent=MS.gene057639.t1 |
| chr4.2 | CDS | 36471868 | 36472545 | 36471868 | ID=cds.MS.gene057639.t1;Parent=MS.gene057639.t1 |
| Gene Sequence |
| Protein sequence |
